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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT4G29230

Z-value: 1.06

Transcription factors associated with AT4G29230

Gene Symbol Gene ID Gene Info
AT4G29230
AT4G29230 NAC domain containing protein 75

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC075arTal_v1_Chr4_+_14409772_14409871-0.332.5e-01Click!

Activity profile of AT4G29230 motif

Sorted Z-values of AT4G29230 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_13128394 1.56 AT4G25810.1
XTR6
xyloglucan endotransglycosylase 6
Chr4_-_14827211 1.38 AT4G30280.1
XTH18
xyloglucan endotransglucosylase/hydrolase 18
Chr2_+_19568464 1.06 AT2G47770.1
TSPO
TSPO(outer membrane tryptophan-rich sensory protein)-like protein
Chr5_-_17331646 1.05 AT5G43170.1
ZF3
zinc-finger protein 3
Chr1_-_27940309 0.94 AT1G74310.1
AT1G74310.2
HSP101
heat shock protein 101
Chr4_-_9754161 0.92 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
Chr1_-_59215 0.90 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
Chr1_-_749034 0.84 AT1G03106.1
AT1G03106
hypothetical protein
Chr2_-_8088302 0.81 AT2G18650.1
MEE16
RING/U-box superfamily protein
Chr4_+_13275200 0.81 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
Chr5_-_37999 0.81 AT5G01100.1
FRB1
O-fucosyltransferase family protein
Chr3_+_17527507 0.79 AT3G47570.1
AT3G47570
Leucine-rich repeat protein kinase family protein
Chr2_-_108803 0.78 AT2G01180.7
AT2G01180.2
AT2G01180.5
AT2G01180.1
AT2G01180.8
AT2G01180.4
AT2G01180.3
PAP1
phosphatidic acid phosphatase 1
Chr1_+_22628264 0.78 AT1G61340.1
AT1G61340.2
FBS1
F-box family protein
Chr3_+_16896166 0.77 AT3G45970.2
AT3G45970.1
EXLA1
expansin-like A1
Chr3_-_10590685 0.77 AT3G28340.1
GATL10
galacturonosyltransferase-like 10
Chr3_+_5249112 0.75 AT3G15518.1
AT3G15518
hypothetical protein
Chr4_+_17752079 0.75 AT4G37770.1
ACS8
1-amino-cyclopropane-1-carboxylate synthase 8
Chr3_+_8550037 0.72 AT3G23730.1
XTH16
xyloglucan endotransglucosylase/hydrolase 16
Chr1_+_24602033 0.70 AT1G66090.1
AT1G66090
Disease resistance protein (TIR-NBS class)
Chr4_-_17300367 0.70 AT4G36700.1
AT4G36700
RmlC-like cupins superfamily protein
Chr5_-_1293723 0.69 AT5G04530.1
KCS19
3-ketoacyl-CoA synthase 19
Chr2_-_6867004 0.69 AT2G15760.1
AT2G15760
calmodulin-binding protein (DUF1645)
Chr1_-_13031375 0.68 AT1G35430.1
AT1G35430
transmembrane protein
Chr3_+_18941925 0.67 AT3G50980.1
XERO1
dehydrin xero 1
Chr4_+_7487225 0.67 AT4G12720.2
AT4G12720.5
AT4G12720.1
AT4G12720.4
NUDT7
MutT/nudix family protein
Chr4_-_16644928 0.64 AT4G34950.1
AT4G34950
Major facilitator superfamily protein
Chr2_+_10838294 0.63 AT2G25470.2
AT2G25470.3
AT2G25470.1
RLP21
receptor like protein 21
Chr2_-_14740146 0.63 AT2G34930.1
AT2G34930
disease resistance family protein / LRR family protein
Chr5_+_25721733 0.62 AT5G64310.1
AGP1
arabinogalactan protein 1
Chr1_-_3392524 0.62 AT1G10340.2
AT1G10340.1
AT1G10340
Ankyrin repeat family protein
Chr5_+_733887 0.62 AT5G03120.1
AT5G03120.2
AT5G03120
transmembrane protein
Chr3_-_15953346 0.61 AT3G44260.1
CAF1a
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr4_+_7487543 0.61 AT4G12720.3
NUDT7
MutT/nudix family protein
Chr4_-_11397726 0.60 AT4G21390.1
AT4G21390.2
B120
S-locus lectin protein kinase family protein
Chr4_+_7487918 0.60 AT4G12720.6
NUDT7
MutT/nudix family protein
Chr2_-_16780368 0.60 AT2G40170.1
GEA6
Stress induced protein
Chr3_+_10505711 0.60 AT3G28180.1
CSLC04
Cellulose-synthase-like C4
Chr4_-_15275404 0.60 AT4G31500.1
CYP83B1
cytochrome P450, family 83, subfamily B, polypeptide 1
Chr3_+_9480746 0.60 AT3G25900.1
AT3G25900.3
AT3G25900.2
HMT-1
Homocysteine S-methyltransferase family protein
Chr2_-_19512728 0.59 AT2G47560.1
AT2G47560
RING/U-box superfamily protein
Chr5_-_23289635 0.59 AT5G57510.1
AT5G57510
cotton fiber protein
Chr1_+_5940292 0.58 AT1G17345.1
AT1G17345
SAUR-like auxin-responsive protein family
Chr1_+_10308520 0.58 AT1G29465.1
AT1G29465
transmembrane protein
Chr1_+_24257054 0.58 AT1G65310.2
XTH17
xyloglucan endotransglucosylase/hydrolase 17
Chr3_+_4371441 0.58 AT3G13432.1
AT3G13432
transmembrane protein
Chr5_+_17734706 0.57 AT5G44070.1
AT5G44070.2
CAD1
phytochelatin synthase 1 (PCS1)
Chr5_+_21943983 0.57 AT5G54070.1
HSFA9
heat shock transcription factor A9
Chr4_+_12137995 0.57 AT4G23180.1
AT4G23180.3
AT4G23180.2
CRK10
cysteine-rich RLK (RECEPTOR-like protein kinase) 10
Chr5_-_7366799 0.56 AT5G22250.1
CAF1b
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr5_+_9683988 0.56 AT5G27420.1
CNI1
carbon/nitrogen insensitive 1
Chr1_+_24257216 0.56 AT1G65310.1
XTH17
xyloglucan endotransglucosylase/hydrolase 17
Chr4_-_11519805 0.56 AT4G21680.1
NRT1.8
NITRATE TRANSPORTER 1.8
Chr4_-_11896480 0.56 AT4G22590.1
TPPG
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr4_-_10391298 0.55 AT4G18970.1
AT4G18970
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_+_9050660 0.55 AT5G25930.1
AT5G25930
kinase family with leucine-rich repeat domain-containing protein
Chr4_-_10390991 0.55 AT4G18970.2
AT4G18970
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_-_108231 0.55 AT2G01180.6
PAP1
phosphatidic acid phosphatase 1
Chr5_+_3206140 0.54 AT5G10210.1
AT5G10210
nitric oxide synthase-interacting protein
Chr5_+_17329275 0.54 AT5G43160.2
AT5G43160.1
QWRF9
QWRF motif protein (DUF566)
Chr3_-_6000447 0.54 AT3G17520.1
AT3G17520
Late embryogenesis abundant protein (LEA) family protein
Chr1_-_24033600 0.53 AT1G64670.1
AT1G64670.3
AT1G64670.2
BDG1
alpha/beta-Hydrolases superfamily protein
Chr5_-_216773 0.53 AT5G01550.1
LECRKA4.2
lectin receptor kinase a4.1
Chr4_-_8753157 0.53 AT4G15330.2
AT4G15330.1
CYP705A1
cytochrome P450, family 705, subfamily A, polypeptide 1
Chr4_-_6443554 0.53 AT4G10390.1
AT4G10390
Protein kinase superfamily protein
Chr4_+_8984787 0.52 AT4G15800.1
RALFL33
ralf-like 33
Chr3_+_2209405 0.52 AT3G07000.1
AT3G07000
Cysteine/Histidine-rich C1 domain family protein
Chr1_+_10300631 0.52 AT1G29418.1
AT1G29418
transmembrane protein
Chr5_+_25033471 0.52 AT5G62340.1
AT5G62340
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr4_+_12660687 0.52 AT4G24510.1
CER2
HXXXD-type acyl-transferase family protein
Chr5_+_280674 0.51 AT5G01740.1
AT5G01740
Nuclear transport factor 2 (NTF2) family protein
Chr4_-_947075 0.51 AT4G02130.2
AT4G02130.3
GATL6
galacturonosyltransferase 6
Chr3_-_1758807 0.50 AT3G05890.1
RCI2B
Low temperature and salt responsive protein family
Chr4_-_14958080 0.50 AT4G30670.1
AT4G30670
Putative membrane lipoprotein
Chr4_-_16740601 0.50 AT4G35180.2
AT4G35180.1
LHT7
LYS/HIS transporter 7
Chr2_-_16792622 0.50 AT2G40205.1
AT2G40205
Ribosomal protein L41 family
Chr2_-_16346769 0.50 AT2G39180.1
CCR2
CRINKLY4 related 2
Chr3_+_5556710 0.49 AT3G16370.1
AT3G16370
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_+_16491692 0.49 AT4G34510.1
KCS17
3-ketoacyl-CoA synthase 17
Chr5_+_17451488 0.49 AT5G43420.1
AT5G43420
RING/U-box superfamily protein
Chr1_+_5602786 0.48 AT1G16390.1
OCT3
organic cation/carnitine transporter 3
Chr3_-_3059148 0.48 AT3G09940.2
AT3G09940.1
MDHAR
monodehydroascorbate reductase
Chr2_-_8533779 0.48 AT2G19800.1
MIOX2
myo-inositol oxygenase 2
Chr1_+_6089460 0.48 AT1G17700.1
PRA1.F1
prenylated RAB acceptor 1.F1
Chr3_+_1982659 0.47 AT3G06460.1
AT3G06460
GNS1/SUR4 membrane protein family
Chr5_-_24859272 0.47 AT5G61900.3
AT5G61900.1
BON1
Calcium-dependent phospholipid-binding Copine family protein
Chr5_+_2680401 0.47 AT5G08330.1
TCP11
TCP family transcription factor
Chr5_+_23400715 0.47 AT5G57760.1
AT5G57760
hypothetical protein
Chr5_+_25322975 0.47 AT5G63130.2
AT5G63130.1
AT5G63130
Octicosapeptide/Phox/Bem1p family protein
Chr3_+_20296130 0.47 AT3G54810.2
BME3
Plant-specific GATA-type zinc finger transcription factor family protein
Chr3_+_20296416 0.47 AT3G54810.1
BME3
Plant-specific GATA-type zinc finger transcription factor family protein
Chr3_-_21087710 0.46 AT3G56980.1
bHLH39
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_-_7353117 0.46 AT4G12420.1
AT4G12420.2
SKU5
Cupredoxin superfamily protein
Chr3_+_20005616 0.46 AT3G54020.1
AtIPCS1
Inositol phosphorylceramide synthase 1
Chr4_-_947249 0.46 AT4G02130.1
GATL6
galacturonosyltransferase 6
Chr3_-_20418910 0.46 AT3G55090.1
ABCG16
ABC-2 type transporter family protein
Chr3_+_18929526 0.46 AT3G50930.1
BCS1
cytochrome BC1 synthesi
Chr3_+_6045002 0.46 AT3G17690.3
AT3G17690.2
AT3G17690.1
CNGC19
cyclic nucleotide gated channel 19
Chr3_-_3003454 0.46 AT3G09780.1
CCR1
CRINKLY4 related 1
Chr3_-_10231567 0.46 AT3G27630.1
AT3G27630
cyclin-dependent kinase inhibitor SMR3-like protein
Chr3_-_7286442 0.46 AT3G20830.1
UCNL
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Chr1_+_19140130 0.45 AT1G51620.2
AT1G51620.1
AT1G51620
Protein kinase superfamily protein
Chr4_+_12249033 0.45 AT4G23470.2
AT4G23470.3
AT4G23470.4
AT4G23470
PLAC8 family protein
Chr1_+_10371675 0.45 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_26852406 0.45 AT1G71230.1
AT1G71230.2
CSN5B
COP9-signalosome 5B
Chr2_+_11852078 0.45 AT2G27810.1
AT2G27810.3
AT2G27810.2
AT2G27810.4
NAT12
nucleobase-ascorbate transporter 12
Chr1_-_19649340 0.44 AT1G52750.1
AT1G52750
alpha/beta-Hydrolases superfamily protein
Chr1_+_29373803 0.44 AT1G78090.1
AT1G78090.2
TPPB
trehalose-6-phosphate phosphatase
Chr2_-_11527854 0.44 AT2G27010.1
CYP705A9
cytochrome P450, family 705, subfamily A, polypeptide 9
Chr3_-_19658124 0.44 AT3G53010.1
AT3G53010
carbohydrate esterase, putative (DUF303)
Chr1_+_11928757 0.44 AT1G32920.1
AT1G32920
hypothetical protein
Chr2_-_12702443 0.43 AT2G29720.1
CTF2B
FAD/NAD(P)-binding oxidoreductase family protein
Chr5_+_22594617 0.43 AT5G55830.1
AT5G55830
Concanavalin A-like lectin protein kinase family protein
Chr5_+_463073 0.43 AT5G02260.1
EXPA9
expansin A9
Chr3_+_5264001 0.43 AT3G15540.1
IAA19
indole-3-acetic acid inducible 19
Chr4_-_12551331 0.43 AT4G24180.4
AT4G24180.5
AT4G24180.2
AT4G24180.3
AT4G24180.1
AT4G24180.6
TLP1
THAUMATIN-LIKE PROTEIN 1
Chr2_+_13916440 0.43 AT2G32800.1
AP4.3A
protein kinase family protein
Chr1_-_24023424 0.43 AT1G64640.1
ENODL8
early nodulin-like protein 8
Chr4_+_15230008 0.43 AT4G31380.1
FLP1
flowering-promoting factor-like protein
Chr5_-_20552670 0.43 AT5G50460.1
AT5G50460
secE/sec61-gamma protein transport protein
Chr5_-_20959409 0.43 AT5G51590.1
AT5G51590
AT hook motif DNA-binding family protein
Chr3_-_2491180 0.43 AT3G07800.1
TK1a
Thymidine kinase
Chr3_+_8581890 0.42 AT3G23800.2
SBP3
selenium-binding protein 3
Chr4_-_14439723 0.42 AT4G29310.1
AT4G29310.2
AT4G29310
DUF1005 family protein (DUF1005)
Chr1_+_729830 0.42 AT1G03070.1
AT1G03070.3
AT1G03070.2
AT1G03070
Bax inhibitor-1 family protein
Chr3_+_6127001 0.42 AT3G17890.1
AT3G17890.2
AT3G17890.3
AT3G17890
hypothetical protein
Chr2_+_11247160 0.42 AT2G26440.1
AT2G26440
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_+_25132498 0.42 AT1G67190.2
AT1G67190.1
AT1G67190
F-box/RNI-like superfamily protein
Chr3_-_8064649 0.42 AT3G22800.1
AT3G22800
Leucine-rich repeat (LRR) family protein
Chr1_+_27127170 0.42 AT1G72100.1
AT1G72100
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
Chr5_-_6842946 0.42 AT5G20270.1
HHP1
heptahelical transmembrane protein1
Chr1_+_12261165 0.42 AT1G33800.1
GXMT1
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Chr5_-_23175476 0.42 AT5G57190.1
AT5G57190.2
PSD2
phosphatidylserine decarboxylase 2
Chr1_+_12188678 0.41 AT1G33610.1
AT1G33610
Leucine-rich repeat (LRR) family protein
Chr5_-_5966785 0.41 AT5G18020.1
SAUR20
SAUR-like auxin-responsive protein family
Chr1_-_6496491 0.41 AT1G18835.1
MIF3
mini zinc finger
Chr4_-_12062757 0.41 AT4G23010.2
AT4G23010.1
AT4G23010.3
UTR2
UDP-galactose transporter 2
Chr2_+_18253610 0.41 AT2G44130.1
AT2G44130
Galactose oxidase/kelch repeat superfamily protein
Chr3_+_4642657 0.41 AT3G14020.2
NF-YA6
nuclear factor Y, subunit A6
Chr4_+_7924135 0.41 AT4G13615.1
AT4G13615
Uncharacterized protein family SERF
Chr4_+_12248842 0.41 AT4G23470.1
AT4G23470
PLAC8 family protein
Chr5_+_24252138 0.40 AT5G60250.1
AT5G60250
zinc finger (C3HC4-type RING finger) family protein
Chr5_+_18559060 0.40 AT5G45750.1
RABA1c
RAB GTPase homolog A1C
Chr2_-_16563441 0.40 AT2G39710.1
AT2G39710
Eukaryotic aspartyl protease family protein
Chr1_-_16657686 0.40 AT1G43910.1
AT1G43910
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_+_10662190 0.40 AT2G25060.1
ENODL14
early nodulin-like protein 14
Chr2_-_18914739 0.40 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
Chr5_-_26970668 0.40 AT5G67640.1
AT5G67640
hypothetical protein
Chr2_-_13684248 0.39 AT2G32235.2
AT2G32235.1
AT2G32235
hypothetical protein
Chr5_+_2206000 0.39 AT5G07110.1
PRA1.B6
prenylated RAB acceptor 1.B6
Chr2_+_1676999 0.39 AT2G04780.2
FLA7
FASCICLIN-like arabinoogalactan 7
Chr4_-_5325363 0.39 AT4G08400.3
AT4G08400.1
AT4G08400.2
AT4G08400
Proline-rich extensin-like family protein
Chr3_+_2206387 0.39 AT3G06990.1
AT3G06990
Cysteine/Histidine-rich C1 domain family protein
Chr5_-_22358381 0.39 AT5G55090.1
AT5G55090.2
MAPKKK15
mitogen-activated protein kinase kinase kinase 15
Chr2_+_1676717 0.39 AT2G04780.1
FLA7
FASCICLIN-like arabinoogalactan 7
Chr5_+_9275893 0.39 AT5G26667.2
AT5G26667.1
AT5G26667.4
AT5G26667.3
PYR6
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_-_19731519 0.39 AT3G53232.1
RTFL1
ROTUNDIFOLIA like 1
Chr3_-_4620305 0.39 AT3G13980.1
AT3G13980
SKI/DACH domain protein
Chr3_-_20756690 0.39 AT3G55950.1
CCR3
CRINKLY4 related 3
Chr3_+_8581446 0.39 AT3G23800.1
SBP3
selenium-binding protein 3
Chr3_+_3189918 0.38 AT3G10310.2
AT3G10310.1
AT3G10310
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein
Chr1_-_28823727 0.38 AT1G76790.1
IGMT5
O-methyltransferase family protein
Chr1_-_4882265 0.38 AT1G14290.1
SBH2
sphingoid base hydroxylase 2
Chr5_+_25233881 0.38 AT5G62865.1
AT5G62865
hypothetical protein
Chr2_+_16531527 0.38 AT2G39660.1
BIK1
botrytis-induced kinase1
Chr1_-_4882003 0.38 AT1G14290.2
SBH2
sphingoid base hydroxylase 2
Chr5_+_16733663 0.38 AT5G41800.1
AT5G41800
Transmembrane amino acid transporter family protein
Chr3_-_9710100 0.38 AT3G26500.1
PIRL2
plant intracellular ras group-related LRR 2
Chr5_+_18875382 0.38 AT5G46530.1
AT5G46530
AWPM-19-like family protein
Chr3_+_16163709 0.37 AT3G44590.1
AT3G44590.2
AT3G44590
60S acidic ribosomal protein family
Chr1_+_27054030 0.37 AT1G71880.1
SUC1
sucrose-proton symporter 1
Chr1_+_27283628 0.37 AT1G72470.1
EXO70D1
exocyst subunit exo70 family protein D1
Chr5_+_26671273 0.37 AT5G66800.1
AT5G66800
membrane-associated kinase regulator-like protein
Chr5_+_2931963 0.37 AT5G09430.1
AT5G09430
alpha/beta-Hydrolases superfamily protein
Chr3_-_4794417 0.37 AT3G14362.1
RTFL10
ROTUNDIFOLIA like 10
Chr1_+_23911024 0.37 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
Chr2_-_10137595 0.37 AT2G23810.1
TET8
tetraspanin8
Chr4_-_12339967 0.36 AT4G23690.1
DIR6
Disease resistance-responsive (dirigent-like protein) family protein
Chr1_-_5783840 0.36 AT1G16905.1
AT1G16905
Curculin-like (mannose-binding) lectin family protein
Chr3_+_21893812 0.36 AT3G59220.1
PRN
pirin
Chr4_-_13910995 0.36 AT4G27950.1
CRF4
cytokinin response factor 4
Chr1_-_4361371 0.36 AT1G12790.1
AT1G12790
DNA ligase-like protein
Chr1_-_9715176 0.36 AT1G27890.1
AT1G27890
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr3_+_1440014 0.36 AT3G05150.1
AT3G05150.2
AT3G05150.3
AT3G05150
Major facilitator superfamily protein
Chr4_-_13836661 0.36 AT4G27730.1
OPT6
oligopeptide transporter 1
Chr3_+_19772930 0.35 AT3G53330.1
AT3G53330
plastocyanin-like domain-containing protein
Chr1_+_26909792 0.35 AT1G71400.1
RLP12
receptor like protein 12
Chr4_+_18478890 0.35 AT4G39830.3
AT4G39830.1
AT4G39830.2
AT4G39830.4
AT4G39830
Cupredoxin superfamily protein
Chr3_-_3548877 0.35 AT3G11320.1
AT3G11320
Nucleotide-sugar transporter family protein
Chr1_-_2945976 0.35 AT1G09140.3
AT1G09140.2
AT1G09140.1
SR30
SERINE-ARGININE PROTEIN 30
Chr5_-_23287739 0.35 AT5G57500.1
AT5G57500
Galactosyltransferase family protein
Chr1_-_28551836 0.35 AT1G76090.1
SMT3
sterol methyltransferase 3
Chr1_+_16933699 0.35 AT1G44830.1
AT1G44830
Integrase-type DNA-binding superfamily protein
Chr2_-_10745594 0.35 AT2G25220.2
AT2G25220.6
AT2G25220.3
AT2G25220.1
AT2G25220
Protein kinase superfamily protein
Chr2_+_1063943 0.35 AT2G03505.1
AT2G03505.2
AT2G03505.3
AT2G03505.4
AT2G03505
Carbohydrate-binding X8 domain superfamily protein
Chr3_+_7021263 0.35 AT3G20110.1
CYP705A20
cytochrome P450, family 705, subfamily A, polypeptide 20
Chr2_-_10122479 0.35 AT2G23770.1
LYK4
protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
Chr1_-_5016604 0.35 AT1G14620.2
AT1G14620.1
DECOY
decoy
Chr3_-_1515566 0.35 AT3G05320.2
AT3G05320.3
AT3G05320
O-fucosyltransferase family protein
Chr3_+_2612175 0.35 AT3G08600.1
AT3G08600
transmembrane protein, putative (DUF1191)

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G29230

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.9 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.2 0.6 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.2 0.8 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.2 1.2 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.2 0.5 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.2 1.0 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.7 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 0.4 GO:0046705 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.1 0.4 GO:0010520 regulation of reciprocal meiotic recombination(GO:0010520)
0.1 0.5 GO:0010185 regulation of cellular defense response(GO:0010185)
0.1 0.3 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 0.3 GO:0071158 negative regulation of fatty acid biosynthetic process(GO:0045717) regulation of cell cycle arrest(GO:0071156) positive regulation of cell cycle arrest(GO:0071158)
0.1 0.6 GO:0071276 phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.1 0.4 GO:1902751 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751) regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.1 0.4 GO:0046440 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.1 1.0 GO:0031542 positive regulation of anthocyanin biosynthetic process(GO:0031542)
0.1 0.5 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 1.6 GO:0030497 fatty acid elongation(GO:0030497)
0.1 0.4 GO:0048462 carpel formation(GO:0048462)
0.1 0.5 GO:0071323 cellular response to chitin(GO:0071323)
0.1 0.3 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.1 0.5 GO:0019310 inositol catabolic process(GO:0019310)
0.1 0.5 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 0.5 GO:0010148 transpiration(GO:0010148)
0.1 0.9 GO:0022610 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.1 0.3 GO:1901529 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) cellular response to absence of light(GO:0071485) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.1 0.3 GO:0031297 DNA recombinase assembly(GO:0000730) replication fork processing(GO:0031297) strand invasion(GO:0042148)
0.1 5.2 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 2.5 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.1 0.3 GO:0090309 regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.1 0.4 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.1 0.3 GO:0009305 protein biotinylation(GO:0009305)
0.1 0.3 GO:0009660 amyloplast organization(GO:0009660)
0.1 0.4 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.1 0.5 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.1 0.3 GO:0009304 tRNA transcription(GO:0009304)
0.1 0.3 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.1 0.3 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.1 0.2 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.1 0.3 GO:0045005 DNA-dependent DNA replication maintenance of fidelity(GO:0045005)
0.1 0.3 GO:0070509 calcium ion import(GO:0070509)
0.1 0.3 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.3 GO:0000080 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.1 0.6 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.1 0.7 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.1 0.2 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.1 0.2 GO:0070193 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.1 0.8 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 0.3 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.1 0.6 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.1 0.2 GO:0006409 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 0.4 GO:0016045 detection of bacterium(GO:0016045)
0.1 0.5 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.2 GO:0090603 sieve element differentiation(GO:0090603)
0.1 0.3 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.1 0.2 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.1 1.4 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.0 0.2 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
0.0 0.5 GO:0080086 stamen filament development(GO:0080086)
0.0 0.6 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.0 0.1 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.0 0.2 GO:0046208 spermine catabolic process(GO:0046208)
0.0 0.2 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.0 0.3 GO:0015837 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.0 0.3 GO:0046125 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.0 0.2 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.0 0.2 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.0 0.2 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 1.7 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.5 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.0 0.7 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.0 0.2 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.0 0.2 GO:0045332 phospholipid translocation(GO:0045332)
0.0 0.5 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.2 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.0 0.1 GO:0046085 inosine catabolic process(GO:0006148) adenosine metabolic process(GO:0046085) inosine metabolic process(GO:0046102)
0.0 0.1 GO:0042353 fucose biosynthetic process(GO:0042353)
0.0 0.1 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.0 0.2 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.1 GO:0080178 5-carbamoylmethyl uridine residue modification(GO:0080178)
0.0 0.4 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.2 GO:0006597 spermine biosynthetic process(GO:0006597)
0.0 0.4 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.0 0.5 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 1.5 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.2 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.0 0.7 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.1 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.0 0.3 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.4 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.0 0.2 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.2 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.1 GO:0035279 leaf proximal/distal pattern formation(GO:0010589) mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795)
0.0 0.3 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.5 GO:0080027 response to herbivore(GO:0080027)
0.0 0.1 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.2 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.3 GO:0045840 positive regulation of mitotic nuclear division(GO:0045840) positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.0 0.1 GO:0019322 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.0 0.2 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 0.1 GO:0080088 spermidine hydroxycinnamate conjugate biosynthetic process(GO:0080088)
0.0 0.4 GO:0032544 plastid translation(GO:0032544)
0.0 0.2 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.0 0.0 GO:0010618 aerenchyma formation(GO:0010618) 1-aminocyclopropane-1-carboxylate metabolic process(GO:0018871)
0.0 0.1 GO:1905181 regulation of urease activity(GO:1905181) positive regulation of urease activity(GO:1905182)
0.0 0.3 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 0.2 GO:2000068 regulation of defense response to insect(GO:2000068)
0.0 0.5 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.0 0.2 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.0 0.1 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.1 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.0 0.6 GO:1901800 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.0 0.1 GO:0051703 synergid death(GO:0010198) pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.0 0.2 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.0 0.2 GO:0006665 sphingolipid metabolic process(GO:0006665)
0.0 0.1 GO:0043406 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.0 0.1 GO:0008216 spermidine metabolic process(GO:0008216)
0.0 0.1 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.0 0.1 GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process(GO:0006207)
0.0 0.1 GO:0051014 actin filament severing(GO:0051014)
0.0 0.1 GO:0042144 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144)
0.0 0.3 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.5 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.1 GO:0034389 lipid particle organization(GO:0034389)
0.0 0.5 GO:0045727 positive regulation of translation(GO:0045727)
0.0 1.6 GO:0019722 calcium-mediated signaling(GO:0019722)
0.0 0.1 GO:0015824 proline transport(GO:0015824)
0.0 0.1 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.0 0.1 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.6 GO:0046246 terpene biosynthetic process(GO:0046246)
0.0 0.7 GO:0090329 regulation of DNA-dependent DNA replication(GO:0090329)
0.0 0.3 GO:0048766 root hair initiation(GO:0048766)
0.0 0.1 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.0 0.1 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.0 0.5 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.1 GO:0060919 auxin influx(GO:0060919)
0.0 0.4 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.0 0.3 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.0 0.2 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.0 0.3 GO:0071484 cellular response to light intensity(GO:0071484)
0.0 0.4 GO:0010152 pollen maturation(GO:0010152)
0.0 0.5 GO:0009693 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.1 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.0 0.2 GO:0046466 membrane lipid catabolic process(GO:0046466)
0.0 0.4 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.1 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.7 GO:0051225 spindle assembly(GO:0051225)
0.0 0.5 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.1 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.0 0.3 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 0.2 GO:0045732 positive regulation of protein catabolic process(GO:0045732)
0.0 2.1 GO:0010200 response to chitin(GO:0010200)
0.0 0.2 GO:0015976 carbon utilization(GO:0015976)
0.0 0.1 GO:0000719 photoreactive repair(GO:0000719)
0.0 0.2 GO:0010037 response to carbon dioxide(GO:0010037)
0.0 0.4 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.8 GO:0002239 response to oomycetes(GO:0002239)
0.0 0.1 GO:0010065 primary meristem tissue development(GO:0010065)
0.0 0.4 GO:0006378 mRNA polyadenylation(GO:0006378)
0.0 0.8 GO:0006887 exocytosis(GO:0006887)
0.0 0.5 GO:0000470 maturation of LSU-rRNA(GO:0000470)
0.0 0.1 GO:0015691 cadmium ion transport(GO:0015691)
0.0 0.3 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.3 GO:0007009 plasma membrane organization(GO:0007009)
0.0 0.2 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.0 GO:0080171 lytic vacuole organization(GO:0080171)
0.0 0.2 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.3 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.0 GO:0010541 acropetal auxin transport(GO:0010541)
0.0 0.1 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.0 0.3 GO:0009846 pollen germination(GO:0009846)
0.0 0.0 GO:2000653 regulation of genetic imprinting(GO:2000653)
0.0 0.2 GO:0009098 leucine biosynthetic process(GO:0009098)
0.0 0.3 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.0 0.2 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.3 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.0 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.0 0.3 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.2 GO:0006826 iron ion transport(GO:0006826)
0.0 0.1 GO:0055069 zinc ion homeostasis(GO:0055069)
0.0 0.6 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 0.2 GO:0045787 positive regulation of cell cycle(GO:0045787)
0.0 0.1 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.0 0.2 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 0.1 GO:0006884 cell volume homeostasis(GO:0006884)
0.0 0.4 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.2 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.2 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.1 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.2 GO:0002098 tRNA wobble uridine modification(GO:0002098)
0.0 0.3 GO:0085029 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.0 0.4 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.7 GO:0009809 lignin biosynthetic process(GO:0009809)
0.0 0.1 GO:0043068 positive regulation of programmed cell death(GO:0043068)
0.0 1.3 GO:0009932 cell tip growth(GO:0009932)
0.0 0.9 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.0 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.0 0.5 GO:0034050 plant-type hypersensitive response(GO:0009626) host programmed cell death induced by symbiont(GO:0034050)
0.0 0.1 GO:0009662 etioplast organization(GO:0009662)
0.0 0.2 GO:0050821 protein stabilization(GO:0050821)
0.0 0.0 GO:0080093 regulation of photorespiration(GO:0080093)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.2 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.2 0.5 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.1 0.5 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.1 0.3 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.1 0.3 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 0.3 GO:0009897 external side of plasma membrane(GO:0009897)
0.1 0.3 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.1 0.4 GO:0070531 BRCA1-A complex(GO:0070531)
0.0 0.7 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.4 GO:0030139 endocytic vesicle(GO:0030139)
0.0 0.3 GO:0009346 citrate lyase complex(GO:0009346)
0.0 0.1 GO:0035371 microtubule plus-end(GO:0035371)
0.0 0.4 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.3 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.0 0.5 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.5 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 0.1 GO:0030681 ribonuclease MRP complex(GO:0000172) nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.0 0.5 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.0 0.1 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.0 1.0 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.2 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.0 0.2 GO:0009517 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.0 0.3 GO:0030131 clathrin adaptor complex(GO:0030131)
0.0 0.6 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.3 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.0 0.1 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.3 GO:0009986 cell surface(GO:0009986)
0.0 0.5 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.2 GO:0035618 root hair(GO:0035618) root hair tip(GO:0035619)
0.0 0.2 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.0 0.2 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.6 GO:0000145 exocyst(GO:0000145)
0.0 3.4 GO:0009505 plant-type cell wall(GO:0009505)
0.0 1.4 GO:0042995 cell projection(GO:0042995)
0.0 0.1 GO:0005884 actin filament(GO:0005884)
0.0 0.3 GO:0016459 myosin complex(GO:0016459)
0.0 0.2 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.0 4.0 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.2 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 1.2 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.6 GO:0005741 mitochondrial outer membrane(GO:0005741)
0.0 0.1 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.1 GO:0030125 clathrin vesicle coat(GO:0030125)
0.0 0.1 GO:0000315 organellar large ribosomal subunit(GO:0000315)
0.0 0.0 GO:0030119 AP-type membrane coat adaptor complex(GO:0030119)
0.0 0.2 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.1 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.3 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.9 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
0.3 2.5 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.3 0.8 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.2 1.2 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.2 0.6 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.2 0.8 GO:0008430 selenium binding(GO:0008430)
0.2 0.5 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.1 0.4 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.1 0.4 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 1.0 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 1.6 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 0.4 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.1 0.6 GO:0015446 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) cadmium ion binding(GO:0046870)
0.1 0.4 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.1 0.4 GO:0016751 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.1 0.1 GO:0033188 sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.1 0.3 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.1 0.4 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 0.9 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 0.4 GO:0033862 UMP kinase activity(GO:0033862)
0.1 0.5 GO:0050113 inositol oxygenase activity(GO:0050113)
0.1 2.3 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.5 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.1 2.4 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.2 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.1 1.3 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 0.3 GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity(GO:0004077) biotin-protein ligase activity(GO:0018271)
0.1 0.3 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.1 0.3 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.1 0.3 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.4 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.1 1.9 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.6 GO:0004806 triglyceride lipase activity(GO:0004806)
0.1 0.3 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.1 0.5 GO:0010011 auxin binding(GO:0010011)
0.1 0.3 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.1 0.2 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.1 0.2 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.1 0.2 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.1 0.4 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.1 0.2 GO:0042577 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.1 0.5 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.1 0.2 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.1 0.3 GO:0000150 recombinase activity(GO:0000150)
0.1 0.8 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.1 GO:0019789 SUMO transferase activity(GO:0019789)
0.0 0.2 GO:0016768 spermine synthase activity(GO:0016768)
0.0 0.2 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 0.2 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.0 0.3 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.0 0.6 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 0.3 GO:0016453 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.0 0.2 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 0.2 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.0 0.1 GO:0051010 microtubule plus-end binding(GO:0051010)
0.0 0.1 GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.0 0.3 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.0 0.2 GO:0016675 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.1 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.0 0.4 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.8 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.2 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.1 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.0 0.2 GO:0070405 ammonium ion binding(GO:0070405)
0.0 0.2 GO:0004001 adenosine kinase activity(GO:0004001)
0.0 0.3 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 0.2 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.0 0.1 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
0.0 0.3 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.2 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.0 0.4 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.4 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 0.2 GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.0 0.4 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.0 0.2 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.0 0.2 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.0 0.2 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.0 0.1 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.0 0.1 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.0 0.3 GO:0008061 chitin binding(GO:0008061)
0.0 0.7 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 0.1 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.0 0.8 GO:0005179 hormone activity(GO:0005179)
0.0 0.3 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 0.3 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.0 0.1 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.0 0.1 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.0 0.2 GO:0071617 lysophospholipid acyltransferase activity(GO:0071617)
0.0 0.6 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.3 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.5 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.7 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.5 GO:0031386 protein tag(GO:0031386)
0.0 0.9 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.2 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.2 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.3 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.1 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.0 0.2 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.0 0.1 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.0 0.1 GO:0019206 nucleoside kinase activity(GO:0019206)
0.0 0.6 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 0.1 GO:0008192 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192)
0.0 0.5 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.3 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.1 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.0 0.1 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.0 0.2 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.2 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.8 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.1 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.0 0.1 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.0 0.1 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.0 0.3 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 0.1 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.0 0.1 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.0 0.2 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.2 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.0 0.5 GO:0008810 cellulase activity(GO:0008810)
0.0 0.1 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.7 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.1 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.6 GO:0005262 calcium channel activity(GO:0005262)
0.0 0.1 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.0 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.0 0.2 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.5 GO:0051087 chaperone binding(GO:0051087)
0.0 0.1 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.0 0.1 GO:0008199 ferric iron binding(GO:0008199)
0.0 0.1 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910) ligase activity, forming phosphoric ester bonds(GO:0016886)
0.0 0.9 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.1 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.0 0.5 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.4 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.2 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.1 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.0 GO:0004348 glucosylceramidase activity(GO:0004348)
0.0 0.0 GO:0008934 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.0 0.2 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.2 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.0 0.1 GO:0036374 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.0 0.0 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.0 0.0 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.0 0.0 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.0 0.8 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 0.2 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.1 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.1 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.0 0.7 GO:0046910 pectinesterase inhibitor activity(GO:0046910)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 PID AURORA A PATHWAY Aurora A signaling
0.1 0.2 PID ARF 3PATHWAY Arf1 pathway
0.1 0.3 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.1 0.4 PID P73PATHWAY p73 transcription factor network
0.1 0.2 PID AVB3 OPN PATHWAY Osteopontin-mediated events
0.0 0.2 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.0 0.1 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.3 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.3 REACTOME MEIOTIC SYNAPSIS Genes involved in Meiotic Synapsis
0.1 0.3 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.1 0.2 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.1 0.2 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.0 0.2 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.0 0.2 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.0 0.1 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.0 0.1 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.0 0.2 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.0 0.2 REACTOME SIGNALING BY PDGF Genes involved in Signaling by PDGF
0.0 0.1 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.0 0.3 REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION Genes involved in Influenza Viral RNA Transcription and Replication