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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT4G28500

Z-value: 0.55

Transcription factors associated with AT4G28500

Gene Symbol Gene ID Gene Info
AT4G28500
AT4G28500 NAC domain containing protein 73

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC073arTal_v1_Chr4_+_14082660_14082660-0.342.3e-01Click!

Activity profile of AT4G28500 motif

Sorted Z-values of AT4G28500 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_-_27940309 0.68 AT1G74310.1
AT1G74310.2
HSP101
heat shock protein 101
Chr3_+_18941925 0.56 AT3G50980.1
XERO1
dehydrin xero 1
Chr2_-_19512728 0.51 AT2G47560.1
AT2G47560
RING/U-box superfamily protein
Chr1_+_10371675 0.47 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_+_25721733 0.47 AT5G64310.1
AGP1
arabinogalactan protein 1
Chr5_+_18905258 0.47 AT5G46590.1
AT5G46590.2
NAC096
NAC domain containing protein 96
Chr3_-_3003454 0.43 AT3G09780.1
CCR1
CRINKLY4 related 1
Chr1_-_20015038 0.43 AT1G53625.1
AT1G53625
hypothetical protein
Chr1_-_6038692 0.42 AT1G17560.2
AT1G17560.1
HLL
Ribosomal protein L14p/L23e family protein
Chr5_-_21207697 0.42 AT5G52220.1
AT5G52220.2
AT5G52220
chromosome transmission fidelity-like protein
Chr4_+_12660687 0.41 AT4G24510.1
CER2
HXXXD-type acyl-transferase family protein
Chr3_+_10505711 0.41 AT3G28180.1
CSLC04
Cellulose-synthase-like C4
Chr4_-_15275404 0.40 AT4G31500.1
CYP83B1
cytochrome P450, family 83, subfamily B, polypeptide 1
Chr5_-_26970668 0.37 AT5G67640.1
AT5G67640
hypothetical protein
Chr4_-_717579 0.37 AT4G01680.3
AT4G01680.1
MYB55
myb domain protein 55
Chr3_+_4371441 0.36 AT3G13432.1
AT3G13432
transmembrane protein
Chr4_+_7038437 0.36 AT4G11655.1
AT4G11655.2
AT4G11655
Uncharacterized protein family (UPF0497)
Chr2_-_16346769 0.35 AT2G39180.1
CCR2
CRINKLY4 related 2
Chr4_-_17300367 0.33 AT4G36700.1
AT4G36700
RmlC-like cupins superfamily protein
Chr3_-_8865239 0.32 AT3G24420.1
AT3G24420
alpha/beta-Hydrolases superfamily protein
Chr5_-_6842946 0.31 AT5G20270.1
HHP1
heptahelical transmembrane protein1
Chr5_+_7718118 0.31 AT5G23020.1
IMS2
2-isopropylmalate synthase 2
Chr1_-_16657686 0.30 AT1G43910.1
AT1G43910
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_-_3517035 0.29 AT5G11070.1
AT5G11070
hypothetical protein
Chr1_-_1358547 0.27 AT1G04820.1
TUA4
tubulin alpha-4 chain
Chr4_-_717415 0.27 AT4G01680.2
MYB55
myb domain protein 55
Chr1_-_30041952 0.27 AT1G79850.1
RPS17
ribosomal protein S17
Chr5_-_15201168 0.23 AT5G38100.4
AT5G38100.1
AT5G38100.2
AT5G38100
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_-_9268852 0.23 AT3G25510.2
AT3G25510.1
AT3G25510
disease resistance protein (TIR-NBS-LRR class) family protein
Chr4_-_11185844 0.22 AT4G20900.2
AT4G20900.1
MS5
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_677240 0.22 AT3G03000.1
AT3G03000
EF hand calcium-binding protein family
Chr3_+_1982659 0.21 AT3G06460.1
AT3G06460
GNS1/SUR4 membrane protein family
Chr3_-_7141353 0.21 AT3G20470.1
GRP5
glycine-rich protein 5
Chr1_-_28407182 0.21 AT1G75640.1
AT1G75640
Leucine-rich receptor-like protein kinase family protein
Chr1_-_29084285 0.21 AT1G77390.1
CYCA1%3B2
CYCLIN A1;2
Chr3_+_23159656 0.21 AT3G62620.4
AT3G62620.1
AT3G62620.5
AT3G62620.6
AT3G62620.9
AT3G62620.2
AT3G62620.7
AT3G62620.8
AT3G62620.3
AT3G62620
sucrose-phosphatase-like protein
Chr1_+_23131928 0.20 AT1G62500.1
AT1G62500
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_26675990 0.20 AT1G70740.2
AT1G70740.1
AT1G70740
Protein kinase superfamily protein
Chr5_+_25236945 0.19 AT5G62880.2
AT5G62880.1
RAC10
RAC-like 10
Chr5_-_15200868 0.19 AT5G38100.3
AT5G38100
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_8867637 0.19 AT5G25470.1
AT5G25470.3
AT5G25470.2
AT5G25470
AP2/B3-like transcriptional factor family protein
Chr4_-_14257965 0.19 AT4G28890.1
AT4G28890
RING/U-box superfamily protein
Chr4_+_15440971 0.18 AT4G31910.1
BAT1
HXXXD-type acyl-transferase family protein
Chr2_-_8045008 0.18 AT2G18540.1
AT2G18540.2
AT2G18540
RmlC-like cupins superfamily protein
Chr2_-_7727404 0.18 AT2G17780.2
AT2G17780.4
AT2G17780.5
AT2G17780.8
AT2G17780.10
AT2G17780.9
AT2G17780.1
AT2G17780.6
AT2G17780.3
AT2G17780.7
MCA2
PLAC8 family protein
Chr4_-_8278810 0.18 AT4G14368.2
AT4G14368.1
AT4G14368.4
AT4G14368.3
AT4G14368
Regulator of chromosome condensation (RCC1) family protein
Chr1_+_3187442 0.18 AT1G09812.1
AT1G09812
multidrug resistance protein
Chr4_+_14876905 0.18 AT4G30420.2
UMAMIT34
nodulin MtN21 /EamA-like transporter family protein
Chr5_+_8752684 0.17 AT5G25260.1
AT5G25260
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr3_+_21738160 0.17 AT3G58780.4
AT3G58780.1
AT3G58780.3
SHP1
K-box region and MADS-box transcription factor family protein
Chr1_-_1448448 0.17 AT1G05040.2
AT1G05040.1
AT1G05040
UBA-like domain protein
Chr2_-_12291092 0.17 AT2G28650.1
EXO70H8
exocyst subunit exo70 family protein H8
Chr5_+_22670186 0.17 AT5G55980.1
AT5G55980
serine-rich protein-like protein
Chr1_-_8023516 0.17 AT1G22670.1
AT1G22670
Protease-associated (PA) RING/U-box zinc finger family protein
Chr5_+_1592013 0.17 AT5G05380.2
AT5G05380.3
AT5G05380.4
AT5G05380.1
PRA1.B3
prenylated RAB acceptor 1.B3
Chr1_-_30027277 0.17 AT1G79820.2
AT1G79820.1
AT1G79820.4
SGB1
Major facilitator superfamily protein
Chr1_-_8424088 0.17 AT1G23830.1
AT1G23830
transmembrane protein
Chr3_+_18929526 0.17 AT3G50930.1
BCS1
cytochrome BC1 synthesi
Chr5_-_3709403 0.16 AT5G11550.1
AT5G11550
ARM repeat superfamily protein
Chr4_-_16144024 0.16 AT4G33590.1
AT4G33590
transmembrane protein
Chr4_+_5712328 0.16 AT4G08910.1
AT4G08910
homeobox protein
Chr5_+_8323895 0.16 AT5G24380.1
YSL2
YELLOW STRIPE like 2
Chr3_-_16359983 0.16 AT3G44810.1
AT3G44810
F-box family protein
Chr1_-_63811 0.16 AT1G01130.1
AT1G01130
CBL-interacting Serine/Threonine-kinase
Chr5_+_24396981 0.16 AT5G60690.1
REV
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Chr1_-_19575866 0.16 AT1G52560.2
AT1G52560.1
AT1G52560
HSP20-like chaperones superfamily protein
Chr2_+_17012176 0.15 AT2G40765.1
AT2G40765
transmembrane protein
Chr1_+_10178902 0.15 AT1G29140.1
AT1G29140
Pollen Ole e 1 allergen and extensin family protein
Chr3_+_9756007 0.15 AT3G26570.1
AT3G26570.2
PHT2%3B1
phosphate transporter 2;1
Chr4_+_16829326 0.15 AT4G35390.1
AGF1
AT-hook protein of GA feedback 1
Chr1_-_30027634 0.15 AT1G79820.3
SGB1
Major facilitator superfamily protein
Chr5_-_23691053 0.14 AT5G58610.5
AT5G58610.6
AT5G58610.1
AT5G58610.7
AT5G58610.9
AT5G58610.11
AT5G58610
PHD finger transcription factor
Chr1_-_19458069 0.14 AT1G52240.1
ROPGEF11
rop guanine nucleotide exchange factor-like protein
Chr2_+_15382661 0.14 AT2G36695.1
AT2G36695
hypothetical protein
Chr1_+_6996354 0.14 AT1G20180.2
AT1G20180
transmembrane protein (DUF677)
Chr4_+_11139609 0.14 AT4G20800.1
AT4G20800
FAD-binding Berberine family protein
Chr3_-_2225254 0.14 AT3G07030.1
AT3G07030.5
AT3G07030
Alba DNA/RNA-binding protein
Chr5_+_21138703 0.14 AT5G52050.1
AT5G52050
MATE efflux family protein
Chr2_-_19266446 0.14 AT2G46880.1
AT2G46880.2
PAP14
purple acid phosphatase 14
Chr1_+_22835078 0.14 AT1G61820.1
BGLU46
beta glucosidase 46
Chr5_+_1785845 0.14 AT5G05940.2
AT5G05940.1
ROPGEF5
ROP guanine nucleotide exchange factor 5
Chr1_-_498539 0.14 AT1G02450.1
NIMIN1
NIM1-interacting 1
Chr5_-_18032293 0.14 AT5G44690.1
AT5G44690
RING finger PFF0165c-like protein
Chr2_+_18283789 0.14 AT2G44220.1
AT2G44220
NEP-interacting protein (DUF239)
Chr3_+_16305322 0.14 AT3G44760.1
AT3G44760
transmembrane protein
Chr1_-_4480325 0.13 AT1G13140.1
AT1G13140.2
CYP86C3
cytochrome P450, family 86, subfamily C, polypeptide 3
Chr1_-_2551544 0.13 AT1G08135.1
CHX6B
cation/H+ exchanger 6B
Chr5_-_17941646 0.13 AT5G44540.1
AT5G44540
Tapetum specific protein TAP35/TAP44
Chr2_+_11247160 0.13 AT2G26440.1
AT2G26440
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_+_21738460 0.13 AT3G58780.2
SHP1
K-box region and MADS-box transcription factor family protein
Chr5_-_23691394 0.13 AT5G58610.4
AT5G58610.2
AT5G58610.3
AT5G58610.10
AT5G58610
PHD finger transcription factor
Chr3_-_8025906 0.13 AT3G22700.1
AT3G22700
F-box and associated interaction domains-containing protein
Chr2_+_10826735 0.13 AT2G25440.1
RLP20
receptor like protein 20
Chr2_+_14053404 0.13 AT2G33160.1
AT2G33160
glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein
Chr5_-_14863392 0.13 AT5G37470.1
AT5G37470.2
AT5G37470
hypothetical protein (DUF577)
Chr3_+_21738883 0.13 AT3G58780.5
SHP1
K-box region and MADS-box transcription factor family protein
Chr1_+_21022384 0.13 AT1G56160.1
MYB72
myb domain protein 72
Chr1_-_16412736 0.13 AT1G43580.1
AT1G43580
Sphingomyelin synthetase family protein
Chr1_-_29011247 0.13 AT1G77210.3
AT1G77210.2
STP14
sugar transporter 14
Chr4_-_13214509 0.13 AT4G26055.1
AT4G26055
transmembrane protein
Chr1_-_25686195 0.13 AT1G68480.1
JAG
C2H2 and C2HC zinc fingers superfamily protein
Chr1_-_25685360 0.13 AT1G68480.3
JAG
C2H2 and C2HC zinc fingers superfamily protein
Chr3_-_23178294 0.13 AT3G62670.1
RR20
two-component response regulator
Chr1_-_12984640 0.13 AT1G35350.2
AT1G35350.1
AT1G35350
EXS (ERD1/XPR1/SYG1) family protein
Chr1_-_30025658 0.13 AT1G79820.5
SGB1
Major facilitator superfamily protein
Chr2_-_8498778 0.12 AT2G19660.1
AT2G19660.2
AT2G19660
Cysteine/Histidine-rich C1 domain family protein
Chr4_-_12914039 0.12 AT4G25180.1
AT4G25180
RNA polymerase III RPC4
Chr3_+_10710405 0.12 AT3G28570.2
AT3G28570.1
AT3G28570
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_6996176 0.12 AT1G20180.1
AT1G20180
transmembrane protein (DUF677)
Chr5_-_8142432 0.12 AT5G24080.1
AT5G24080.3
AT5G24080.2
AT5G24080
Protein kinase superfamily protein
Chr3_-_16999992 0.12 AT3G46260.1
AT3G46260
kinase-like protein
Chr5_-_25381317 0.12 AT5G63350.1
AT5G63350
von willebrand factor A domain protein
Chr1_-_29012096 0.12 AT1G77210.1
STP14
sugar transporter 14
Chr1_+_9241036 0.12 AT1G26730.1
AT1G26730.2
AT1G26730
EXS (ERD1/XPR1/SYG1) family protein
Chr5_+_6776073 0.12 AT5G20060.1
AT5G20060.2
AT5G20060.4
AT5G20060.3
AT5G20060
alpha/beta-Hydrolases superfamily protein
Chr2_+_450379 0.12 AT2G01960.1
TET14
tetraspanin14
Chr4_-_10223028 0.12 AT4G18540.2
AT4G18540.1
AT4G18540
transmembrane protein
Chr1_-_25007647 0.12 AT1G67000.1
AT1G67000
Protein kinase superfamily protein
Chr5_+_24363591 0.12 AT5G60610.1
AT5G60610
F-box/RNI-like superfamily protein
Chr2_-_8955831 0.12 AT2G20800.1
NDB4
NAD(P)H dehydrogenase B4
Chr5_+_24363933 0.12 AT5G60610.2
AT5G60610
F-box/RNI-like superfamily protein
Chr2_+_14105896 0.12 AT2G33280.2
AT2G33280.1
AT2G33280
Major facilitator superfamily protein
Chr5_-_16930532 0.12 AT5G42340.1
PUB15
Plant U-Box 15
Chr5_+_7328870 0.12 AT5G22100.1
AT5G22100
RNA cyclase family protein
Chr2_+_9290705 0.12 AT2G21780.1
AT2G21780
hypothetical protein
Chr3_-_3534958 0.12 AT3G11280.2
AT3G11280.1
AT3G11280
Duplicated homeodomain-like superfamily protein
Chr5_-_23691216 0.12 AT5G58610.8
AT5G58610
PHD finger transcription factor
Chr4_-_3816028 0.12 AT4G06648.1
AT4G06648

Chr2_-_14122190 0.12 AT2G33320.1
AT2G33320
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr1_-_25685868 0.11 AT1G68480.2
JAG
C2H2 and C2HC zinc fingers superfamily protein
Chr1_-_28965367 0.11 AT1G77095.1
AT1G77095

Chr4_-_15341955 0.11 AT4G31680.2
AT4G31680.1
AT4G31680
Transcriptional factor B3 family protein
Chr3_-_16726116 0.11 AT3G45570.1
AT3G45570
RING/U-box protein with C6HC-type zinc finger domain-containing protein
Chr1_-_5354314 0.11 AT1G15560.1
AT1G15560

Chr3_+_8603212 0.11 AT3G23820.1
GAE6
UDP-D-glucuronate 4-epimerase 6
Chr1_-_28485951 0.11 AT1G75860.1
AT1G75860.2
AT1G75860
DNA ligase
Chr2_-_17882636 0.11 AT2G43000.1
AT2G43000.2
NAC042
NAC domain containing protein 42
Chr4_+_17592996 0.11 AT4G37420.1
AT4G37420
glycosyltransferase family protein (DUF23)
Chr1_+_29181110 0.11 AT1G77650.1
AT1G77650
F-box associated ubiquitination effector family protein
Chr1_+_677360 0.11 AT1G02980.1
CUL2
cullin 2
Chr5_-_15417253 0.11 AT5G38500.1
AT5G38500
B3 domain protein (DUF313)
Chr1_+_26996805 0.11 AT1G71790.1
CPB
Subunits of heterodimeric actin filament capping protein Capz superfamily
Chr3_+_23159944 0.11 AT3G62620.10
AT3G62620
sucrose-phosphatase-like protein
Chr5_-_24189765 0.11 AT5G60060.1
AT5G60060
F-box SKIP23-like protein (DUF295)
Chr4_-_5407320 0.11 AT4G08500.1
MEKK1
MAPK/ERK kinase kinase 1
Chr1_-_23055672 0.10 AT1G62340.1
ALE1
PA-domain containing subtilase family protein
Chr4_+_7067035 0.10 AT4G11730.1
AT4G11730
Cation transporter/ E1-E2 ATPase family protein
Chr2_-_18847835 0.10 AT2G45760.1
BAP2
BON association protein 2
Chr2_+_14106118 0.10 AT2G33280.3
AT2G33280
Major facilitator superfamily protein
Chr4_+_14768784 0.10 AT4G30180.1
AT4G30180
hypothetical protein
Chr5_-_10268620 0.10 AT5G28285.1
AT5G28285

Chr3_-_7501888 0.10 AT3G21320.1
AT3G21320
EARLY FLOWERING protein
Chr1_-_21713103 0.10 AT1G58430.1
RXF26
GDSL-like Lipase/Acylhydrolase family protein
Chr1_+_9476197 0.10 AT1G27285.1
AT1G27285

Chr2_+_15906555 0.10 AT2G38010.2
AT2G38010.3
AT2G38010
Neutral/alkaline non-lysosomal ceramidase
Chr1_-_4626064 0.10 AT1G13490.1
AT1G13490.2
AT1G13490
hypothetical protein (DUF1262)
Chr1_+_677869 0.10 AT1G02980.2
CUL2
cullin 2
Chr2_-_12355480 0.10 AT2G28790.1
AT2G28790.2
AT2G28790
Pathogenesis-related thaumatin superfamily protein
Chr2_-_10264065 0.10 AT2G24140.3
AT2G24140.1
AT2G24140.4
AT2G24140.2
AT2G24140
myosin-J heavy chain-like protein (Protein of unknown function, DUF593)
Chr2_-_13995749 0.10 AT2G32970.1
AT2G32970.4
AT2G32970.2
AT2G32970
G1/S-specific cyclin-E protein
Chr5_-_22847615 0.10 AT5G56400.1
AT5G56400
FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein
Chr4_+_8713689 0.10 AT4G15260.1
AT4G15260
UDP-Glycosyltransferase superfamily protein
Chr1_-_10042693 0.10 AT1G28570.3
AT1G28570
SGNH hydrolase-type esterase superfamily protein
Chr1_-_17035105 0.10 AT1G45063.1
AT1G45063.2
AT1G45063
copper ion binding / electron carrier protein
Chr3_-_15717829 0.09 AT3G43863.1
AT3G43863

Chr2_+_17713196 0.09 AT2G42550.1
AT2G42550
Protein kinase superfamily protein
Chr5_-_2847415 0.09 AT5G08730.1
ARI16
IBR domain-containing protein
Chr2_-_19294375 0.09 AT2G46960.2
AT2G46960.1
CYP709B1
cytochrome P450, family 709, subfamily B, polypeptide 1
Chr5_+_9974411 0.09 AT5G27940.1
WPP3
WPP domain protein 3
Chr5_+_19883929 0.09 AT5G49050.1
AT5G49050
universal stress A-like protein
Chr3_-_21564067 0.09 AT3G58210.1
AT3G58210
TRAF-like family protein
Chr4_+_6473547 0.09 AT4G10465.1
AT4G10465
Heavy metal transport/detoxification superfamily protein
Chr5_-_22326418 0.09 AT5G55020.1
MYB120
myb domain protein 120
Chr3_-_19782230 0.09 AT3G53350.7
RIP3
ROP interactive partner 4
Chr3_+_241739 0.09 AT3G01650.1
AT3G01650.2
RGLG1
RING domain ligase1
Chr2_-_19138725 0.09 AT2G46610.2
AT2G46610.1
AT2G46610.3
RS31a
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr4_-_857020 0.09 AT4G01970.1
STS
stachyose synthase
Chr5_-_17873698 0.09 AT5G44360.1
AT5G44360.2
AT5G44360
FAD-binding Berberine family protein
Chr1_+_23144385 0.09 AT1G62520.1
AT1G62520
sulfated surface-like glycoprotein
Chr5_+_257306 0.09 AT5G01690.1
CHX27
cation/H+ exchanger 27
Chr2_+_14288323 0.09 AT2G33775.1
RALFL19
ralf-like 19
Chr3_-_19781741 0.09 AT3G53350.3
RIP3
ROP interactive partner 4
Chr3_+_4889063 0.09 AT3G14560.1
AT3G14560
hypothetical protein
Chr5_+_8096256 0.09 AT5G23970.1
AT5G23970
HXXXD-type acyl-transferase family protein
Chr1_-_5486105 0.09 AT1G15960.1
NRAMP6
NRAMP metal ion transporter 6
Chr2_+_15906862 0.09 AT2G38010.1
AT2G38010
Neutral/alkaline non-lysosomal ceramidase
Chr5_-_15413132 0.09 AT5G38490.1
AT5G38490
B3 domain protein (DUF313)
Chr3_+_9278878 0.09 AT3G25550.1
AT3G25550
F-box family protein
Chr4_-_857401 0.09 AT4G01970.2
STS
stachyose synthase
Chr1_+_23966909 0.09 AT1G64540.2
AT1G64540
F-box/FBD-like domains containing protein
Chr3_+_23381604 0.09 AT3G63290.1
AT3G63290.2
AT3G63290
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_-_17885614 0.09 AT1G48405.1
AT1G48405
Kinase interacting (KIP1-like) family protein
Chr4_+_6230822 0.09 AT4G09940.2
AT4G09940
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_-_18308303 0.09 AT5G45230.1
AT5G45230
Disease resistance protein (TIR-NBS-LRR class) family
Chr3_+_7358840 0.09 AT3G20990.1
AT3G20990

Chr3_+_1928868 0.09 AT3G06360.1
AGP27
arabinogalactan protein 27
Chr2_-_12655457 0.09 AT2G29590.1
AT2G29590
Thioesterase superfamily protein
Chr2_-_13995590 0.09 AT2G32970.3
AT2G32970
G1/S-specific cyclin-E protein
Chr4_+_16904059 0.08 AT4G35630.1
PSAT
phosphoserine aminotransferase
Chr4_+_6231786 0.08 AT4G09940.1
AT4G09940
P-loop containing nucleoside triphosphate hydrolases superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G28500

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 0.3 GO:0071258 cellular response to gravity(GO:0071258)
0.1 0.4 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.2 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.0 0.2 GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process(GO:2001009)
0.0 0.2 GO:0070509 calcium ion import(GO:0070509)
0.0 0.1 GO:1990532 stress response to nickel ion(GO:1990532)
0.0 0.2 GO:0046622 positive regulation of organ growth(GO:0046622)
0.0 0.2 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.0 0.4 GO:0080060 integument development(GO:0080060)
0.0 0.4 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.1 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.0 0.3 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.2 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.4 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.0 0.1 GO:1902065 response to L-glutamate(GO:1902065)
0.0 0.1 GO:0090059 protoxylem development(GO:0090059)
0.0 0.3 GO:0009098 leucine biosynthetic process(GO:0009098)
0.0 0.4 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.0 0.1 GO:0019593 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.0 0.6 GO:0045727 positive regulation of translation(GO:0045727)
0.0 0.1 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.0 0.3 GO:0032544 plastid translation(GO:0032544)
0.0 0.1 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.1 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.0 0.1 GO:0006561 proline biosynthetic process(GO:0006561)
0.0 0.1 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.5 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.0 0.1 GO:0009405 pathogenesis(GO:0009405)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.0 0.3 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.0 0.1 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.0 0.3 GO:0045298 tubulin complex(GO:0045298)
0.0 0.4 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.2 GO:0009531 secondary cell wall(GO:0009531)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.3 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.1 0.2 GO:0015185 L-alanine transmembrane transporter activity(GO:0015180) gamma-aminobutyric acid transmembrane transporter activity(GO:0015185) alanine transmembrane transporter activity(GO:0022858)
0.1 0.3 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.2 GO:0051980 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.0 0.4 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.2 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.0 0.1 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
0.0 0.1 GO:0033188 sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.0 0.1 GO:0004484 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192)
0.0 0.1 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.1 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.0 0.2 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.3 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.3 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.0 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.0 0.2 GO:0019903 protein phosphatase binding(GO:0019903)
0.0 0.5 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.3 GO:0005200 structural constituent of cytoskeleton(GO:0005200)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.2 REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
0.1 0.2 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.0 0.3 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex