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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT4G18770

Z-value: 0.76

Transcription factors associated with AT4G18770

Gene Symbol Gene ID Gene Info
AT4G18770
AT4G18770 myb domain protein 98

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB98arTal_v1_Chr4_+_10311030_103110300.431.2e-01Click!

Activity profile of AT4G18770 motif

Sorted Z-values of AT4G18770 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_7417873 0.97 AT4G12510.1
AT4G12510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_-_6960216 0.82 AT2G16005.1
AT2G16005
MD-2-related lipid recognition domain-containing protein
Chr1_-_1527360 0.78 AT1G05250.1
AT1G05250
Peroxidase superfamily protein
Chr4_-_12337599 0.74 AT4G23680.1
AT4G23680
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr2_+_235925 0.73 AT2G01520.1
MLP328
MLP-like protein 328
Chr4_+_14762819 0.72 AT4G30170.1
AT4G30170
Peroxidase family protein
Chr5_-_8508957 0.70 AT5G24780.2
VSP1
vegetative storage protein 1
Chr4_+_11917057 0.70 AT4G22666.2
AT4G22666.1
AT4G22666
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_8509201 0.68 AT5G24780.1
VSP1
vegetative storage protein 1
Chr5_+_2803833 0.60 AT5G08640.1
AT5G08640.2
FLS1
flavonol synthase 1
Chr5_-_23768111 0.60 AT5G58860.1
CYP86A1
cytochrome P450, family 86, subfamily A, polypeptide 1
Chr2_+_16463347 0.60 AT2G39430.1
AT2G39430
Disease resistance-responsive (dirigent-like protein) family protein
Chr5_-_23301689 0.60 AT5G57530.1
XTH12
xyloglucan endotransglucosylase/hydrolase 12
Chr1_-_10127098 0.58 AT1G29025.1
AT1G29025
Calcium-binding EF-hand family protein
Chr5_-_16995062 0.58 AT5G42500.1
AT5G42500
Disease resistance-responsive (dirigent-like protein) family protein
Chr4_+_10703348 0.57 AT4G19680.1
AT4G19680.2
IRT2
iron regulated transporter 2
Chr4_-_18275017 0.56 AT4G39260.4
AT4G39260.3
AT4G39260.2
AT4G39260.1
CCR1
cold, circadian rhythm, and RNA binding 1
Chr3_+_3595694 0.55 AT3G11430.1
GPAT5
glycerol-3-phosphate acyltransferase 5
Chr3_+_23266227 0.55 AT3G62950.1
AT3G62950
Thioredoxin superfamily protein
Chr5_+_1835047 0.54 AT5G06090.1
GPAT7
glycerol-3-phosphate acyltransferase 7
Chr5_+_4541780 0.53 AT5G14070.1
ROXY2
Thioredoxin superfamily protein
Chr5_-_17831336 0.52 AT5G44260.1
AT5G44260
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr3_+_20471787 0.52 AT3G55230.1
AT3G55230
Disease resistance-responsive (dirigent-like protein) family protein
Chr1_+_4661682 0.52 AT1G13608.1
AT1G13608
Defensin-like (DEFL) family protein
Chr5_+_84474 0.51 AT5G01210.1
AT5G01210
HXXXD-type acyl-transferase family protein
Chr5_-_20544857 0.50 AT5G50450.1
AT5G50450
HCP-like superfamily protein with MYND-type zinc finger
Chr5_+_16290386 0.49 AT5G40690.1
AT5G40690
histone-lysine N-methyltransferase trithorax-like protein
Chr4_-_17494279 0.49 AT4G37150.1
MES9
methyl esterase 9
Chr2_-_16690182 0.48 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
Chr2_-_16499524 0.48 AT2G39530.1
AT2G39530
Uncharacterized protein family (UPF0497)
Chr2_+_873506 0.47 AT2G02990.1
RNS1
ribonuclease 1
Chr1_+_27670626 0.47 AT1G73600.1
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_8418242 0.46 AT4G14690.1
ELIP2
Chlorophyll A-B binding family protein
Chr5_-_19629167 0.46 AT5G48430.1
AT5G48430
Eukaryotic aspartyl protease family protein
Chr5_+_23003909 0.46 AT5G56870.1
BGAL4
beta-galactosidase 4
Chr1_+_4864881 0.45 AT1G14240.2
AT1G14240.4
AT1G14240.1
AT1G14240.3
AT1G14240
GDA1/CD39 nucleoside phosphatase family protein
Chr3_-_2830649 0.45 AT3G09220.2
AT3G09220.1
LAC7
laccase 7
Chr1_+_1529767 0.45 AT1G05260.1
RCI3
Peroxidase superfamily protein
Chr5_-_20016857 0.45 AT5G49360.1
BXL1
beta-xylosidase 1
Chr1_-_6241510 0.44 AT1G18140.1
LAC1
laccase 1
Chr2_+_7606728 0.44 AT2G17500.2
AT2G17500.1
AT2G17500.3
AT2G17500.4
AT2G17500
Auxin efflux carrier family protein
Chr3_-_17008528 0.44 AT3G46280.1
AT3G46280
kinase-like protein
Chr2_+_15445294 0.43 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr3_+_5571903 0.43 AT3G16410.1
NSP4
nitrile specifier protein 4
Chr1_+_27669152 0.43 AT1G73600.2
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_-_16347364 0.43 AT4G34135.1
AT4G34135.2
UGT73B2
UDP-glucosyltransferase 73B2
Chr1_+_20366313 0.42 AT1G54530.1
AT1G54530
Calcium-binding EF hand family protein
Chr5_+_4087689 0.42 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
Chr1_-_27989865 0.42 AT1G74460.1
AT1G74460
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_-_10798235 0.41 AT5G28770.4
AT5G28770.1
AT5G28770.3
AT5G28770.2
BZO2H3
bZIP transcription factor family protein
Chr1_-_26796529 0.41 AT1G71030.1
AT1G71030.2
MYBL2
MYB-like 2
Chr3_-_17760950 0.41 AT3G48100.1
RR5
response regulator 5
Chr3_-_20015451 0.41 AT3G54040.1
AT3G54040
PAR1 protein
Chr3_-_20015653 0.40 AT3G54040.2
AT3G54040
PAR1 protein
Chr4_-_12333904 0.40 AT4G23670.1
AT4G23670
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr1_+_6100964 0.40 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
Chr2_-_18248316 0.40 AT2G44110.1
AT2G44110.2
MLO15
Seven transmembrane MLO family protein
Chr1_+_23199612 0.39 AT1G62660.2
AT1G62660.1
AT1G62660.3
AT1G62660
Glycosyl hydrolases family 32 protein
Chr5_+_13434151 0.39 AT5G35190.2
AT5G35190.1
EXT13
proline-rich extensin-like family protein
Chr1_+_29373803 0.39 AT1G78090.1
AT1G78090.2
TPPB
trehalose-6-phosphate phosphatase
Chr1_-_6908805 0.39 AT1G19900.1
AT1G19900
glyoxal oxidase-related protein
Chr1_-_24395503 0.38 AT1G65610.1
KOR2
Six-hairpin glycosidases superfamily protein
Chr2_-_15560755 0.38 AT2G37040.1
PAL1
PHE ammonia lyase 1
Chr5_+_6826365 0.38 AT5G20230.1
BCB
blue-copper-binding protein
Chr1_-_4975705 0.38 AT1G14540.1
PER4
Peroxidase superfamily protein
Chr4_-_1559412 0.38 AT4G03510.3
AT4G03510.4
AT4G03510.1
AT4G03510.2
RMA1
RING membrane-anchor 1
Chr1_+_12261165 0.37 AT1G33800.1
GXMT1
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Chr1_+_8401808 0.37 AT1G23760.1
JP630
BURP domain-containing protein
Chr1_-_11548016 0.37 AT1G32100.1
PRR1
pinoresinol reductase 1
Chr1_-_30404713 0.37 AT1G80920.1
J8
Chaperone DnaJ-domain superfamily protein
Chr5_-_26517599 0.37 AT5G66390.1
AT5G66390
Peroxidase superfamily protein
Chr5_+_6585355 0.37 AT5G19520.1
AT5G19520.2
MSL9
mechanosensitive channel of small conductance-like 9
Chr3_-_1956397 0.37 AT3G06420.1
ATG8H
Ubiquitin-like superfamily protein
Chr2_-_19207608 0.36 AT2G46740.1
GulLO5
D-arabinono-1,4-lactone oxidase family protein
Chr1_+_1846701 0.36 AT1G06090.1
AT1G06090
Fatty acid desaturase family protein
Chr5_+_24707445 0.36 AT5G61440.2
AT5G61440.1
ACHT5
atypical CYS HIS rich thioredoxin 5
Chr5_+_26772644 0.36 AT5G67080.1
MAPKKK19
mitogen-activated protein kinase kinase kinase 19
Chr1_+_24489758 0.36 AT1G65840.1
PAO4
polyamine oxidase 4
Chr4_-_11896480 0.36 AT4G22590.1
TPPG
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr1_+_25957823 0.36 AT1G69040.1
ACR4
ACT domain repeat 4
Chr2_-_9967788 0.36 AT2G23410.1
CPT
cis-prenyltransferase
Chr4_+_17201922 0.35 AT4G36410.1
UBC17
ubiquitin-conjugating enzyme 17
Chr5_+_8042853 0.35 AT5G23860.1
AT5G23860.2
TUB8
tubulin beta 8
Chr1_-_9293862 0.35 AT1G26820.1
RNS3
ribonuclease 3
Chr1_+_1279351 0.35 AT1G04610.1
YUC3
YUCCA 3
Chr2_-_11599322 0.35 AT2G27140.1
AT2G27140
HSP20-like chaperones superfamily protein
Chr5_+_24167996 0.35 AT5G60020.1
AT5G60020.2
LAC17
laccase 17
Chr3_-_5777841 0.35 AT3G16920.1
CTL2
chitinase-like protein
Chr1_+_23200591 0.35 AT1G62660.4
AT1G62660
Glycosyl hydrolases family 32 protein
Chr5_+_22808641 0.35 AT5G56320.2
AT5G56320.1
AT5G56320.3
EXPA14
expansin A14
Chr1_+_25957567 0.35 AT1G69040.2
ACR4
ACT domain repeat 4
Chr2_+_15934244 0.35 AT2G38080.1
IRX12
Laccase/Diphenol oxidase family protein
Chr2_-_7765276 0.34 AT2G17870.1
CSP3
cold shock domain protein 3
Chr1_-_624567 0.34 AT1G02820.1
LEA3
Late embryogenesis abundant 3 (LEA3) family protein
Chr2_-_18646606 0.34 AT2G45220.1
AT2G45220
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_-_16850487 0.34 AT2G40340.3
AT2G40340.1
AT2G40340.2
AT2G40340.5
AT2G40340.6
AT2G40340.4
DREB2C
Integrase-type DNA-binding superfamily protein
Chr1_-_8912642 0.34 AT1G25400.2
AT1G25400
transmembrane protein
Chr1_+_275188 0.34 AT1G01750.1
AT1G01750.2
ADF11
actin depolymerizing factor 11
Chr5_-_779424 0.34 AT5G03260.1
LAC11
laccase 11
Chr3_+_7021263 0.34 AT3G20110.1
CYP705A20
cytochrome P450, family 705, subfamily A, polypeptide 20
Chr5_-_14976229 0.33 AT5G37690.2
AT5G37690.1
AT5G37690
SGNH hydrolase-type esterase superfamily protein
Chr5_-_24335858 0.33 AT5G60530.1
AT5G60530
late embryogenesis abundant protein-related / LEA protein-like protein
Chr1_-_8912822 0.33 AT1G25400.1
AT1G25400
transmembrane protein
Chr5_+_26910205 0.33 AT5G67430.2
AT5G67430.1
AT5G67430
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr4_-_8850516 0.33 AT4G15480.1
UGT84A1
UDP-Glycosyltransferase superfamily protein
Chr1_+_2032338 0.33 AT1G06640.3
AT1G06640.2
AT1G06640
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_+_15256243 0.33 AT5G38200.2
AT5G38200.3
AT5G38200.1
AT5G38200
Class I glutamine amidotransferase-like superfamily protein
Chr3_+_20736508 0.33 AT3G55880.1
AT3G55880.3
AT3G55880.2
AT3G55880.4
SUE4
Alpha/beta hydrolase related protein
Chr2_+_15890869 0.33 AT2G37970.1
SOUL-1
SOUL heme-binding family protein
Chr2_-_12685145 0.33 AT2G29670.2
AT2G29670.1
AT2G29670
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_19542760 0.32 AT5G48180.1
NSP5
nitrile specifier protein 5
Chr1_-_8983314 0.32 AT1G25560.1
TEM1
AP2/B3 transcription factor family protein
Chr4_+_14385471 0.32 AT4G29180.2
AT4G29180.3
AT4G29180.1
RHS16
root hair specific 16
Chr1_+_2031626 0.32 AT1G06640.1
AT1G06640
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_-_19056447 0.32 AT3G51330.2
AT3G51330.3
AT3G51330.1
AT3G51330
Eukaryotic aspartyl protease family protein
Chr4_+_18185437 0.32 AT4G39030.1
EDS5
MATE efflux family protein
Chr2_+_18172889 0.32 AT2G43880.1
AT2G43880.2
AT2G43880
Pectin lyase-like superfamily protein
Chr1_+_6515373 0.32 AT1G18870.1
AT1G18870.3
ICS2
isochorismate synthase 2
Chr1_+_4542168 0.32 AT1G13260.1
RAV1
related to ABI3/VP1 1
Chr4_-_11585391 0.32 AT4G21830.2
MSRB7
methionine sulfoxide reductase B7
Chr1_+_19619724 0.31 AT1G52690.2
AT1G52690.1
LEA7
Late embryogenesis abundant protein (LEA) family protein
Chr4_-_11585542 0.31 AT4G21830.1
MSRB7
methionine sulfoxide reductase B7
Chr5_-_8277406 0.31 AT5G24313.1
AT5G24313
transmembrane protein
Chr2_+_17251819 0.31 AT2G41380.1
AT2G41380
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_-_5778052 0.31 AT3G16920.2
CTL2
chitinase-like protein
Chr4_+_17852441 0.31 AT4G37980.2
AT4G37980.1
ELI3-1
cinnamyl alcohol dehydrogenase 7
Chr1_+_30241452 0.31 AT1G80440.1
AT1G80440
Galactose oxidase/kelch repeat superfamily protein
Chr4_-_9064786 0.31 AT4G16000.1
AT4G16000
hypothetical protein
Chr3_+_21982989 0.31 AT3G59480.1
AT3G59480
pfkB-like carbohydrate kinase family protein
Chr2_+_11860218 0.30 AT2G27830.1
AT2G27830
hypothetical protein
Chr5_+_1563286 0.30 AT5G05270.1
AT5G05270.2
CHIL
Chalcone-flavanone isomerase family protein
Chr1_+_6515644 0.30 AT1G18870.2
ICS2
isochorismate synthase 2
Chr4_+_14274341 0.30 AT4G28940.1
AT4G28940
Phosphorylase superfamily protein
Chr5_+_25550937 0.30 AT5G63850.1
AAP4
amino acid permease 4
Chr5_-_13364411 0.30 AT5G35110.1
AT5G35110
hypothetical protein
Chr3_-_20418910 0.30 AT3G55090.1
ABCG16
ABC-2 type transporter family protein
Chr5_-_9333284 0.29 AT5G26660.2
AT5G26660.1
MYB86
myb domain protein 86
Chr1_+_8195776 0.29 AT1G23100.1
AT1G23100
GroES-like family protein
Chr3_-_21499943 0.29 AT3G58060.1
AT3G58060
Cation efflux family protein
Chr5_+_1378954 0.29 AT5G04770.3
CAT6
cationic amino acid transporter 6
Chr5_+_1378788 0.29 AT5G04770.2
CAT6
cationic amino acid transporter 6
Chr5_-_5904380 0.29 AT5G17860.2
CAX7
calcium exchanger 7
Chr1_+_1855910 0.29 AT1G06120.1
AT1G06120
Fatty acid desaturase family protein
Chr3_+_17465510 0.29 AT3G47400.1
AT3G47400
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_+_12527675 0.29 AT4G24130.1
AT4G24130
DUF538 family protein (Protein of unknown function, DUF538)
Chr4_-_10316886 0.29 AT4G18780.1
IRX1
cellulose synthase family protein
Chr5_+_1378621 0.29 AT5G04770.1
CAT6
cationic amino acid transporter 6
Chr2_-_15614916 0.29 AT2G37170.1
AT2G37170.2
PIP2B
plasma membrane intrinsic protein 2
Chr2_-_1419491 0.28 AT2G04170.4
AT2G04170.2
AT2G04170.7
AT2G04170.6
AT2G04170.5
AT2G04170
TRAF-like family protein
Chr5_-_5904532 0.28 AT5G17860.1
CAX7
calcium exchanger 7
Chr5_-_4620551 0.28 AT5G14330.1
AT5G14330
transmembrane protein
Chr4_-_12886695 0.28 AT4G25100.1
AT4G25100.3
AT4G25100.4
FSD1
Fe superoxide dismutase 1
Chr2_-_16702336 0.28 AT2G40000.1
HSPRO2
ortholog of sugar beet HS1 PRO-1 2
Chr1_-_25446952 0.28 AT1G67865.1
AT1G67865
hypothetical protein
Chr5_+_1231609 0.28 AT5G04370.1
AT5G04370.3
AT5G04370.2
NAMT1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_-_7493080 0.28 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr5_-_2176446 0.28 AT5G07010.1
ST2A
sulfotransferase 2A
Chr3_+_5588459 0.28 AT3G16450.3
AT3G16450.1
JAL33
Mannose-binding lectin superfamily protein
Chr3_-_9008801 0.28 AT3G24670.1
AT3G24670
Pectin lyase-like superfamily protein
Chr5_+_17920456 0.28 AT5G44480.2
AT5G44480.3
DUR
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_+_5585872 0.27 AT3G16440.2
AT3G16440.1
MLP-300B
myrosinase-binding protein-like protein-300B
Chr1_+_10892445 0.27 AT1G30700.1
AT1G30700
FAD-binding Berberine family protein
Chr3_-_1756924 0.27 AT3G05880.1
RCI2A
Low temperature and salt responsive protein family
Chr2_-_16432751 0.27 AT2G39350.1
ABCG1
ABC-2 type transporter family protein
Chr1_+_618061 0.27 AT1G02810.1
AT1G02810
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_+_19508929 0.27 AT2G47550.1
AT2G47550
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_-_12551331 0.27 AT4G24180.4
AT4G24180.5
AT4G24180.2
AT4G24180.3
AT4G24180.1
AT4G24180.6
TLP1
THAUMATIN-LIKE PROTEIN 1
Chr4_-_1445220 0.27 AT4G03292.1
AT4G03292
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr4_+_14274909 0.27 AT4G28940.2
AT4G28940
Phosphorylase superfamily protein
Chr3_+_5588292 0.27 AT3G16450.2
JAL33
Mannose-binding lectin superfamily protein
Chr2_-_13386392 0.27 AT2G31390.1
AT2G31390
pfkB-like carbohydrate kinase family protein
Chr2_+_14685170 0.27 AT2G34810.1
AT2G34810
FAD-binding Berberine family protein
Chr2_-_17441416 0.27 AT2G41810.1
AT2G41810
imidazolonepropionase (Protein of unknown function, DUF642)
Chr5_+_523257 0.27 AT5G02420.1
AT5G02420
cyclin-dependent kinase inhibitor SMR3-like protein
Chr3_-_15092521 0.26 AT3G43110.1
AT3G43110
transmembrane protein
Chr1_+_3363432 0.26 AT1G10270.1
GRP23
glutamine-rich protein 23
Chr3_-_21499676 0.26 AT3G58060.2
AT3G58060
Cation efflux family protein
Chr3_-_1261634 0.26 AT3G04640.2
AT3G04640.1
AT3G04640.3
AT3G04640
glycine-rich protein
Chr1_+_4674152 0.26 AT1G13635.2
AT1G13635.1
AT1G13635
DNA glycosylase superfamily protein
Chr4_-_12295859 0.26 AT4G23560.1
GH9B15
glycosyl hydrolase 9B15
Chr4_+_17346805 0.26 AT4G36820.1
AT4G36820
calcium uniporter (DUF607)
Chr4_-_14393381 0.26 AT4G29190.1
OZF2
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr1_-_26364759 0.26 AT1G70000.2
AT1G70000.1
AT1G70000
myb-like transcription factor family protein
Chr1_-_28233134 0.26 AT1G75220.1
ERDL6
Major facilitator superfamily protein
Chr5_-_25652247 0.26 AT5G64100.1
AT5G64100
Peroxidase superfamily protein
Chr3_-_20431597 0.26 AT3G55120.1
TT5
Chalcone-flavanone isomerase family protein
Chr1_-_5068677 0.26 AT1G14720.1
XTH28
xyloglucan endotransglucosylase/hydrolase 28
Chr5_-_15461459 0.26 AT5G38610.1
AT5G38610
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_20098522 0.26 AT1G53830.1
PME2
pectin methylesterase 2
Chr5_-_3705129 0.26 AT5G11540.1
GulLO3
D-arabinono-1,4-lactone oxidase family protein
Chr1_+_26182156 0.25 AT1G69600.1
ZFHD1
zinc finger homeodomain 1
Chr4_+_10211577 0.25 AT4G18510.1
CLE2
CLAVATA3/ESR-related 2
Chr3_+_9396272 0.25 AT3G25730.1
EDF3
ethylene response DNA binding factor 3
Chr2_-_15227276 0.25 AT2G36310.1
URH1
uridine-ribohydrolase 1
Chr1_+_18201889 0.25 AT1G49210.1
AT1G49210
RING/U-box superfamily protein
Chr1_-_513698 0.25 AT1G02470.2
AT1G02470.1
AT1G02470
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr1_+_28174187 0.25 AT1G75030.1
TLP-3
thaumatin-like protein 3
Chr1_-_29513100 0.25 AT1G78440.1
ATGA2OX1
gibberellin 2-beta-dioxygenase
Chr3_-_20361560 0.25 AT3G54950.1
pPLAIIIbeta
patatin-like protein 6
Chr1_-_28453820 0.25 AT1G75780.1
TUB1
tubulin beta-1 chain

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G18770

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0015840 urea transport(GO:0015840)
0.1 0.3 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.1 0.5 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.1 0.4 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.1 0.2 GO:0046203 spermidine catabolic process(GO:0046203)
0.1 0.5 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.1 0.4 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.1 0.6 GO:0016045 detection of bacterium(GO:0016045)
0.1 0.4 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.1 0.3 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.1 0.3 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1 0.7 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.2 GO:0000032 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
0.1 0.2 GO:0000494 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.1 0.2 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 0.3 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 0.1 GO:0032025 response to cobalt ion(GO:0032025)
0.1 0.4 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.3 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.1 0.3 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.0 0.7 GO:0010274 hydrotropism(GO:0010274)
0.0 0.3 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.0 0.9 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.5 GO:0000304 response to singlet oxygen(GO:0000304)
0.0 0.2 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.2 GO:0035494 SNARE complex disassembly(GO:0035494)
0.0 0.3 GO:0019264 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.0 0.4 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.5 GO:0045230 UDP-L-arabinose biosynthetic process(GO:0033358) extracellular polysaccharide biosynthetic process(GO:0045226) capsule polysaccharide biosynthetic process(GO:0045227) capsule organization(GO:0045230) extracellular polysaccharide metabolic process(GO:0046379)
0.0 0.2 GO:0016139 glycoside catabolic process(GO:0016139)
0.0 0.7 GO:0006030 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.8 GO:0033238 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238)
0.0 0.9 GO:0042593 glucose homeostasis(GO:0042593)
0.0 0.2 GO:0090030 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.0 0.2 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.0 0.2 GO:0006567 threonine catabolic process(GO:0006567)
0.0 1.2 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.3 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.0 0.1 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.0 0.7 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.0 0.3 GO:0046133 pyrimidine ribonucleoside catabolic process(GO:0046133) pyrimidine nucleoside catabolic process(GO:0046135)
0.0 0.2 GO:0072530 purine-containing compound transmembrane transport(GO:0072530)
0.0 0.1 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.0 0.1 GO:0040019 positive regulation of embryonic development(GO:0040019)
0.0 0.1 GO:0072698 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.0 0.2 GO:0060919 auxin influx(GO:0060919)
0.0 0.4 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.1 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.0 0.9 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.5 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0 0.2 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.0 0.2 GO:0009647 skotomorphogenesis(GO:0009647)
0.0 0.1 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.0 2.3 GO:0009813 flavonoid biosynthetic process(GO:0009813)
0.0 0.3 GO:0006102 isocitrate metabolic process(GO:0006102)
0.0 0.2 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.0 0.3 GO:0080183 response to photooxidative stress(GO:0080183)
0.0 0.1 GO:0019367 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.2 GO:1901465 positive regulation of tetrapyrrole biosynthetic process(GO:1901465)
0.0 0.4 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.2 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.1 GO:0000050 urea cycle(GO:0000050)
0.0 0.1 GO:0009915 phloem sucrose loading(GO:0009915)
0.0 0.4 GO:0055069 zinc ion homeostasis(GO:0055069)
0.0 0.4 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.3 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.1 GO:0009866 induced systemic resistance, ethylene mediated signaling pathway(GO:0009866)
0.0 0.1 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
0.0 0.2 GO:0043447 alkane biosynthetic process(GO:0043447)
0.0 0.1 GO:0043470 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.0 1.8 GO:0009808 lignin metabolic process(GO:0009808)
0.0 0.0 GO:0009945 radial axis specification(GO:0009945)
0.0 0.2 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.0 0.2 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.0 0.1 GO:0006741 NADP biosynthetic process(GO:0006741)
0.0 0.2 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.0 0.1 GO:0018871 1-aminocyclopropane-1-carboxylate metabolic process(GO:0018871) 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.4 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.0 0.2 GO:1902025 nitrate import(GO:1902025)
0.0 0.2 GO:0019243 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.2 GO:0072659 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.0 0.2 GO:0006624 vacuolar protein processing(GO:0006624)
0.0 0.2 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.0 0.1 GO:1904812 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.0 0.6 GO:0006826 iron ion transport(GO:0006826)
0.0 0.1 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.0 0.0 GO:1990532 stress response to nickel ion(GO:1990532)
0.0 0.1 GO:0046622 positive regulation of organ growth(GO:0046622)
0.0 0.1 GO:0000710 meiotic mismatch repair(GO:0000710) regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.1 GO:0032978 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.0 0.3 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.0 0.3 GO:0080086 stamen filament development(GO:0080086)
0.0 0.2 GO:1902456 regulation of stomatal opening(GO:1902456)
0.0 0.1 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.0 0.8 GO:0010927 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.0 0.0 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.0 0.1 GO:0070542 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.0 0.1 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414) mitochondrial tRNA processing(GO:0090646)
0.0 0.2 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.2 GO:0000966 RNA 5'-end processing(GO:0000966)
0.0 0.1 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 0.1 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.0 0.0 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.0 0.1 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.0 0.1 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.0 0.0 GO:0071242 cellular response to ammonium ion(GO:0071242)
0.0 0.1 GO:0046521 sphingoid catabolic process(GO:0046521)
0.0 0.2 GO:0080113 regulation of seed growth(GO:0080113)
0.0 0.1 GO:0007035 vacuolar acidification(GO:0007035) intracellular pH reduction(GO:0051452)
0.0 0.1 GO:0090059 protoxylem development(GO:0090059)
0.0 0.1 GO:0045828 positive regulation of isoprenoid metabolic process(GO:0045828)
0.0 0.0 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.0 0.1 GO:0015786 UDP-glucose transport(GO:0015786)
0.0 0.0 GO:0017145 stem cell division(GO:0017145)
0.0 0.2 GO:0071450 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.0 0.2 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.0 0.1 GO:2000068 regulation of defense response to insect(GO:2000068)
0.0 0.2 GO:0010555 response to mannitol(GO:0010555)
0.0 0.1 GO:0048533 sporocyte differentiation(GO:0048533)
0.0 0.4 GO:0050821 protein stabilization(GO:0050821)
0.0 0.1 GO:0006285 base-excision repair, AP site formation(GO:0006285)
0.0 0.2 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.2 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 0.1 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.0 0.4 GO:0009612 response to mechanical stimulus(GO:0009612)
0.0 0.0 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.1 GO:0046417 chorismate metabolic process(GO:0046417)
0.0 0.6 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.1 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.0 0.1 GO:0015074 DNA integration(GO:0015074)
0.0 0.2 GO:0051984 positive regulation of mitotic nuclear division(GO:0045840) positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of chromosome segregation(GO:0051984) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.0 0.1 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.0 0.1 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.0 0.1 GO:0015739 sialic acid transport(GO:0015739)
0.0 0.5 GO:0010214 seed coat development(GO:0010214)
0.0 0.3 GO:0019374 galactolipid metabolic process(GO:0019374)
0.0 0.1 GO:0046900 tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.0 0.0 GO:0006425 glutaminyl-tRNA aminoacylation(GO:0006425)
0.0 0.7 GO:0010311 lateral root formation(GO:0010311)
0.0 0.0 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.0 0.1 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.0 0.3 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.0 0.5 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 0.1 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.0 0.1 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.0 0.0 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.0 0.1 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.0 0.1 GO:0031333 negative regulation of protein complex assembly(GO:0031333)
0.0 0.3 GO:0009269 response to desiccation(GO:0009269)
0.0 0.1 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.0 0.1 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 0.0 GO:0080145 cysteine homeostasis(GO:0080145)
0.0 0.0 GO:0034389 lipid particle organization(GO:0034389)
0.0 0.1 GO:1903959 regulation of anion transmembrane transport(GO:1903959)
0.0 0.1 GO:0097438 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.0 0.1 GO:0006168 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.0 0.3 GO:0030091 protein repair(GO:0030091)
0.0 0.1 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.0 0.1 GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion(GO:0006296)
0.0 0.1 GO:1901959 positive regulation of cutin biosynthetic process(GO:1901959)
0.0 0.3 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 0.0 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.0 0.1 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.0 0.1 GO:0009099 valine biosynthetic process(GO:0009099)
0.0 0.0 GO:0002100 tRNA wobble adenosine to inosine editing(GO:0002100)
0.0 0.1 GO:0032973 amino acid export(GO:0032973)
0.0 0.1 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.0 0.1 GO:0046149 chlorophyll catabolic process(GO:0015996) pigment catabolic process(GO:0046149)
0.0 0.1 GO:0080187 floral organ senescence(GO:0080187)
0.0 0.4 GO:0032508 DNA duplex unwinding(GO:0032508)
0.0 0.0 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.0 0.4 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.0 0.0 GO:0010269 response to selenium ion(GO:0010269)
0.0 0.0 GO:0046386 deoxyribonucleoside triphosphate catabolic process(GO:0009204) deoxyribose phosphate catabolic process(GO:0046386)
0.0 0.3 GO:0030042 actin filament depolymerization(GO:0030042)
0.0 0.2 GO:0098876 vesicle-mediated transport to the plasma membrane(GO:0098876)
0.0 0.0 GO:0048859 formation of organ boundary(GO:0010160) formation of anatomical boundary(GO:0048859)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0031080 nuclear pore outer ring(GO:0031080)
0.1 0.3 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.1 0.4 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 0.2 GO:0030689 Noc complex(GO:0030689)
0.0 0.1 GO:0035371 microtubule plus-end(GO:0035371)
0.0 0.1 GO:0034457 Mpp10 complex(GO:0034457)
0.0 0.3 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.4 GO:0045298 tubulin complex(GO:0045298)
0.0 0.3 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 0.1 GO:0035102 PRC1 complex(GO:0035102)
0.0 0.1 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.0 0.1 GO:0005960 glycine cleavage complex(GO:0005960)
0.0 0.1 GO:0001673 male germ cell nucleus(GO:0001673)
0.0 0.2 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.1 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.0 0.2 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.0 GO:0005846 nuclear cap binding complex(GO:0005846)
0.0 0.0 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.0 0.1 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.0 0.1 GO:0098554 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.0 0.1 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.3 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 0.5 GO:0005764 lysosome(GO:0005764)
0.0 0.1 GO:0042555 MCM complex(GO:0042555)
0.0 0.0 GO:0034715 pICln-Sm protein complex(GO:0034715)
0.0 0.1 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.0 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.0 0.4 GO:0000145 exocyst(GO:0000145)
0.0 1.9 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.1 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:0008909 isochorismate synthase activity(GO:0008909)
0.2 0.6 GO:0045430 chalcone isomerase activity(GO:0045430)
0.2 0.8 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.1 0.4 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.1 0.6 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.1 1.1 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.4 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.1 0.4 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.1 0.4 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.1 0.3 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.1 0.7 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.1 2.3 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 1.1 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.1 0.4 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 0.4 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.6 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.3 GO:0045437 uridine nucleosidase activity(GO:0045437) ribosylpyrimidine nucleosidase activity(GO:0050263)
0.1 0.4 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.1 0.2 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.1 0.6 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.6 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.1 0.4 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 0.4 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 0.2 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.1 0.2 GO:0003856 3-dehydroquinate synthase activity(GO:0003856)
0.1 0.2 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.1 0.3 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.2 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.1 0.5 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.1 0.3 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.1 0.2 GO:1990259 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.1 0.4 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.1 0.4 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 1.4 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.2 GO:0009924 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.1 0.2 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.0 0.1 GO:0051010 microtubule plus-end binding(GO:0051010)
0.0 1.2 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.5 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 0.2 GO:0016040 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.0 0.2 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.0 0.1 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.0 0.1 GO:0030275 LRR domain binding(GO:0030275)
0.0 0.2 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.0 0.3 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.0 0.2 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 0.5 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.0 0.2 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.0 0.2 GO:0050347 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.0 0.2 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0 0.1 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.0 0.3 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.2 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.0 0.5 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.2 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.1 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.0 0.2 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 0.1 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.0 0.8 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.1 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.0 0.2 GO:0030332 cyclin binding(GO:0030332)
0.0 0.1 GO:0070401 NADP+ binding(GO:0070401)
0.0 0.2 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.0 0.2 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.0 0.4 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.0 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.0 0.2 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.0 0.6 GO:0005504 fatty acid binding(GO:0005504)
0.0 0.2 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.0 0.4 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 0.6 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.3 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.4 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.1 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.0 0.7 GO:0004568 chitinase activity(GO:0004568)
0.0 0.2 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.0 0.1 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.0 0.2 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 0.1 GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor(GO:0016647)
0.0 0.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.1 GO:0004775 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.0 0.1 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.0 0.3 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 0.5 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 0.1 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.0 0.3 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.1 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.0 0.4 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.1 GO:0004106 chorismate mutase activity(GO:0004106)
0.0 0.3 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.1 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 0.1 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.0 0.1 GO:0000213 tRNA-intron endonuclease activity(GO:0000213)
0.0 0.1 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.0 0.2 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.0 0.2 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.0 0.1 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.0 0.1 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.0 1.0 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.2 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.0 0.2 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
0.0 0.3 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.1 GO:0004448 isocitrate dehydrogenase activity(GO:0004448) isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.0 0.5 GO:0008810 cellulase activity(GO:0008810)
0.0 0.1 GO:0003985 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.0 0.1 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.0 1.4 GO:0030599 pectinesterase activity(GO:0030599)
0.0 1.8 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.1 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.0 0.1 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.0 0.1 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.0 0.3 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.2 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.1 GO:0019158 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.0 0.0 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.0 0.0 GO:0035615 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.8 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.1 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.0 0.5 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.0 0.2 GO:0004629 phospholipase C activity(GO:0004629)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.0 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.0 0.0 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.0 0.1 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.0 0.1 GO:0008083 growth factor activity(GO:0008083)
0.0 0.1 GO:0016649 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.0 0.0 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.0 0.1 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.0 0.3 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.1 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.0 0.1 GO:0008131 primary amine oxidase activity(GO:0008131)
0.0 0.1 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.2 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.0 0.0 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.0 0.0 GO:0044540 L-cystine L-cysteine-lyase (deaminating)(GO:0044540)
0.0 0.1 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.1 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.0 0.1 GO:0004556 alpha-amylase activity(GO:0004556)
0.0 0.1 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.2 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.1 GO:0004049 anthranilate synthase activity(GO:0004049)
0.0 0.3 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.0 GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity(GO:0004571)
0.0 0.4 GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors(GO:0016706)
0.0 0.9 GO:0016410 N-acyltransferase activity(GO:0016410)
0.0 0.1 GO:0070139 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.0 0.8 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 0.1 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.0 0.0 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.1 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.1 GO:0043765 double-stranded DNA exodeoxyribonuclease activity(GO:0008309) T/G mismatch-specific endonuclease activity(GO:0043765)
0.0 1.4 GO:0019900 kinase binding(GO:0019900)
0.0 0.4 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.1 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.0 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.0 0.1 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.1 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.0 0.2 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.1 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.0 0.1 GO:0032977 membrane insertase activity(GO:0032977)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.1 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.1 0.4 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.0 0.2 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.0 0.6 PID E2F PATHWAY E2F transcription factor network
0.0 0.2 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.0 0.1 PID REELIN PATHWAY Reelin signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.1 0.2 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.1 0.5 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.5 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.4 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.0 0.1 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.0 0.1 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.0 0.1 REACTOME MRNA PROCESSING Genes involved in mRNA Processing
0.0 0.0 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.0 0.4 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport