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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT4G16150

Z-value: 1.75

Transcription factors associated with AT4G16150

Gene Symbol Gene ID Gene Info
AT4G16150
AT4G16150 calmodulin-binding transcription activator 5

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT4G16150arTal_v1_Chr4_+_9148059_9148059-0.752.1e-03Click!

Activity profile of AT4G16150 motif

Sorted Z-values of AT4G16150 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_9538963 2.69 AT2G22470.1
AGP2
arabinogalactan protein 2
Chr2_+_13677986 2.68 AT2G32210.3
AT2G32210.2
AT2G32210.1
AT2G32210
cysteine-rich/transmembrane domain A-like protein
Chr1_-_9649323 2.59 AT1G27730.1
STZ
salt tolerance zinc finger
Chr4_-_7786161 2.47 AT4G13395.1
RTFL12
ROTUNDIFOLIA like 12
Chr3_-_15953346 2.26 AT3G44260.1
CAF1a
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr5_-_3517035 2.22 AT5G11070.1
AT5G11070
hypothetical protein
Chr3_+_16892702 2.20 AT3G45960.2
AT3G45960.1
EXLA3
expansin-like A3
Chr5_-_18371021 2.19 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr4_-_17041131 2.17 AT4G36010.2
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr5_+_5718498 2.15 AT5G17350.1
AT5G17350
hypothetical protein
Chr4_-_17041326 2.14 AT4G36010.1
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr3_-_2130451 1.95 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr1_-_3241863 1.88 AT1G09950.1
RAS1
RESPONSE TO ABA AND SALT 1
Chr2_+_11566288 1.86 AT2G27080.1
AT2G27080
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr4_-_524249 1.84 AT4G01250.1
WRKY22
WRKY family transcription factor
Chr3_+_5187082 1.83 AT3G15357.1
AT3G15357
phosphopantothenoylcysteine decarboxylase subunit
Chr4_-_13022996 1.82 AT4G25490.1
CBF1
C-repeat/DRE binding factor 1
Chr2_-_14862178 1.81 AT2G35290.1
AT2G35290
hypothetical protein
Chr5_+_23187840 1.77 AT5G57220.1
CYP81F2
cytochrome P450, family 81, subfamily F, polypeptide 2
Chr5_+_6833564 1.76 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
Chr5_-_14999619 1.73 AT5G37770.1
AT5G37770.2
TCH2
EF hand calcium-binding protein family
Chr1_-_8559066 1.62 AT1G24170.1
LGT9
Nucleotide-diphospho-sugar transferases superfamily protein
Chr2_-_14740146 1.60 AT2G34930.1
AT2G34930
disease resistance family protein / LRR family protein
Chr1_+_17123785 1.59 AT1G45201.3
AT1G45201.1
AT1G45201.2
TLL1
triacylglycerol lipase-like 1
Chr1_+_2927502 1.59 AT1G09070.1
SRC2
soybean gene regulated by cold-2
Chr3_+_5121303 1.54 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
Chr1_+_5596633 1.52 AT1G16370.1
OCT6
organic cation/carnitine transporter 6
Chr5_+_25322975 1.50 AT5G63130.2
AT5G63130.1
AT5G63130
Octicosapeptide/Phox/Bem1p family protein
Chr1_-_6241510 1.49 AT1G18140.1
LAC1
laccase 1
Chr2_+_11563933 1.49 AT2G27080.2
AT2G27080
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr1_-_575085 1.45 AT1G02660.1
AT1G02660
alpha/beta-Hydrolases superfamily protein
Chr1_-_24771393 1.40 AT1G66400.1
CML23
calmodulin like 23
Chr1_-_16838562 1.40 AT1G44350.1
ILL6
IAA-amino acid hydrolase ILR1-like 6
Chr3_-_6980523 1.40 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
Chr3_+_20776220 1.39 AT3G55980.2
AT3G55980.1
SZF1
salt-inducible zinc finger 1
Chr5_+_25721733 1.39 AT5G64310.1
AGP1
arabinogalactan protein 1
Chr4_-_16740601 1.37 AT4G35180.2
AT4G35180.1
LHT7
LYS/HIS transporter 7
Chr2_-_2362149 1.36 AT2G06050.3
AT2G06050.2
OPR3
oxophytodienoate-reductase 3
Chr1_+_486800 1.33 AT1G02400.1
AT1G02400.2
GA2OX6
gibberellin 2-oxidase 6
Chr2_-_16497145 1.32 AT2G39518.1
AT2G39518
Uncharacterized protein family (UPF0497)
Chr5_+_25097944 1.31 AT5G62520.1
AT5G62520.2
SRO5
similar to RCD one 5
Chr3_+_20005616 1.30 AT3G54020.1
AtIPCS1
Inositol phosphorylceramide synthase 1
Chr3_+_23201032 1.28 AT3G62720.2
AT3G62720.1
XT1
xylosyltransferase 1
Chr2_-_832619 1.24 AT2G02860.2
AT2G02860.1
SUT2
sucrose transporter 2
Chr2_-_2362375 1.22 AT2G06050.1
OPR3
oxophytodienoate-reductase 3
Chr4_-_10391298 1.21 AT4G18970.1
AT4G18970
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_10390991 1.21 AT4G18970.2
AT4G18970
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_12451556 1.21 AT3G30775.2
AT3G30775.1
ERD5
Methylenetetrahydrofolate reductase family protein
Chr1_+_6299669 1.20 AT1G18300.1
NUDT4
nudix hydrolase homolog 4
Chr1_+_24637196 1.20 AT1G66160.2
AT1G66160.1
CMPG1
CYS, MET, PRO, and GLY protein 1
Chr1_+_29178705 1.19 AT1G77640.1
AT1G77640
Integrase-type DNA-binding superfamily protein
Chr2_-_8533779 1.16 AT2G19800.1
MIOX2
myo-inositol oxygenase 2
Chr2_+_14216771 1.16 AT2G33570.1
GALS1
glycosyltransferase family protein (DUF23)
Chr4_+_564760 1.15 AT4G01360.1
BPS3
BPS1-like protein
Chr5_+_1608988 1.15 AT5G05440.1
PYL5
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr1_+_22073352 1.15 AT1G59970.1
AT1G59970
Matrixin family protein
Chr3_-_18442198 1.14 AT3G49720.2
AT3G49720.3
AT3G49720.1
AT3G49720
transmembrane protein
Chr2_+_11669629 1.14 AT2G27260.1
AT2G27260
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr5_-_23700226 1.12 AT5G58650.1
PSY1
plant peptide containing sulfated tyrosine 1
Chr5_-_4423095 1.11 AT5G13700.1
PAO1
polyamine oxidase 1
Chr1_+_6061895 1.10 AT1G17620.1
AT1G17620
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr3_+_3186266 1.10 AT3G10300.3
AT3G10300.2
AT3G10300.1
AT3G10300.5
AT3G10300.4
AT3G10300
Calcium-binding EF-hand family protein
Chr2_-_10711281 1.06 AT2G25160.2
AT2G25160.1
CYP82F1
cytochrome P450, family 82, subfamily F, polypeptide 1
Chr3_+_22514027 1.06 AT3G60930.2
AT3G60930

Chr1_-_1358547 1.03 AT1G04820.1
TUA4
tubulin alpha-4 chain
Chr5_-_18383693 1.03 AT5G45350.2
AT5G45350.4
AT5G45350.3
AT5G45350.5
AT5G45350.7
AT5G45350
proline-rich family protein
Chr3_-_18364956 1.03 AT3G49530.2
AT3G49530.1
NAC062
NAC domain containing protein 62
Chr2_+_9737583 1.01 AT2G22860.1
PSK2
phytosulfokine 2 precursor
Chr1_-_5758583 1.01 AT1G16820.4
AT1G16820.1
AT1G16820
vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-like protein
Chr2_+_801527 1.00 AT2G02810.1
UTR1
UDP-galactose transporter 1
Chr1_+_22031343 0.98 AT1G59860.1
AT1G59860
HSP20-like chaperones superfamily protein
Chr3_+_6958509 0.98 AT3G19970.1
AT3G19970.2
AT3G19970.3
AT3G19970.5
AT3G19970.4
AT3G19970
alpha/beta-Hydrolases superfamily protein
Chr2_+_15876717 0.97 AT2G37940.2
AT2G37940.1
AtIPCS2
Inositol phosphorylceramide synthase 2
Chr3_+_3186038 0.97 AT3G10300.6
AT3G10300
Calcium-binding EF-hand family protein
Chr5_+_19046339 0.97 AT5G46910.1
AT5G46910.2
AT5G46910
Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Chr3_-_23299126 0.96 AT3G63052.1
AT3G63052
hypothetical protein
Chr5_+_5899046 0.96 AT5G17850.2
AT5G17850
Sodium/calcium exchanger family protein
Chr5_+_5898852 0.95 AT5G17850.1
AT5G17850
Sodium/calcium exchanger family protein
Chr5_+_17522486 0.94 AT5G43620.1
AT5G43620
Pre-mRNA cleavage complex II
Chr3_-_20756690 0.92 AT3G55950.1
CCR3
CRINKLY4 related 3
Chr5_-_3044546 0.92 AT5G09800.1
AT5G09800
ARM repeat superfamily protein
Chr1_-_13456336 0.92 AT1G36060.1
AT1G36060
Integrase-type DNA-binding superfamily protein
Chr1_+_6622055 0.92 AT1G19180.3
AT1G19180.2
JAZ1
jasmonate-zim-domain protein 1
Chr1_+_6463849 0.91 AT1G18740.1
AT1G18740
ROH1, putative (DUF793)
Chr1_-_24812661 0.90 AT1G66500.1
AT1G66500
Pre-mRNA cleavage complex II
Chr4_+_12785226 0.90 AT4G24805.1
AT4G24805
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_+_18228768 0.90 AT5G45110.1
AT5G45110.2
NPR3
NPR1-like protein 3
Chr5_-_18383492 0.89 AT5G45350.6
AT5G45350
proline-rich family protein
Chr3_-_20552215 0.89 AT3G55430.1
AT3G55430
O-Glycosyl hydrolases family 17 protein
Chr1_+_19154323 0.89 AT1G51660.1
MKK4
mitogen-activated protein kinase kinase 4
Chr3_-_23218312 0.88 AT3G62760.1
ATGSTF13
Glutathione S-transferase family protein
Chr4_-_9663794 0.88 AT4G17230.2
AT4G17230.1
SCL13
SCARECROW-like 13
Chr1_+_6621777 0.88 AT1G19180.1
JAZ1
jasmonate-zim-domain protein 1
Chr5_+_7726702 0.85 AT5G23030.1
TET12
tetraspanin12
Chr5_-_18384069 0.84 AT5G45350.1
AT5G45350
proline-rich family protein
Chr4_-_17376279 0.84 AT4G36880.1
CP1
cysteine proteinase1
Chr4_-_12551331 0.83 AT4G24180.4
AT4G24180.5
AT4G24180.2
AT4G24180.3
AT4G24180.1
AT4G24180.6
TLP1
THAUMATIN-LIKE PROTEIN 1
Chr3_+_17450852 0.83 AT3G47360.1
HSD3
hydroxysteroid dehydrogenase 3
Chr1_-_8537780 0.83 AT1G24140.1
AT1G24140
Matrixin family protein
Chr1_-_10378961 0.81 AT1G29680.1
AT1G29680
histone acetyltransferase (DUF1264)
Chr1_+_26400694 0.81 AT1G70090.1
AT1G70090.2
LGT8
glucosyl transferase family 8
Chr3_+_22514415 0.80 AT3G60930.1
AT3G60930

Chr4_+_14579563 0.80 AT4G29780.1
AT4G29780
nuclease
Chr3_-_18618816 0.79 AT3G50220.1
IRX15
IRREGULAR XYLEM protein (DUF579)
Chr3_+_618398 0.79 AT3G02840.1
AT3G02840
ARM repeat superfamily protein
Chr5_-_8419076 0.79 AT5G24590.2
TIP
TCV-interacting protein
Chr4_+_14762819 0.78 AT4G30170.1
AT4G30170
Peroxidase family protein
Chr3_-_5445329 0.78 AT3G16050.1
PDX1.2
pyridoxine biosynthesis 1.2
Chr1_+_19958380 0.78 AT1G53470.1
MSL4
mechanosensitive channel of small conductance-like 4
Chr5_-_7084859 0.78 AT5G20885.1
AT5G20885
RING/U-box superfamily protein
Chr1_+_267993 0.77 AT1G01720.1
ATAF1
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr2_+_15192480 0.76 AT2G36220.1
AT2G36220
hypothetical protein
Chr1_+_26423874 0.74 AT1G70170.1
MMP
matrix metalloproteinase
Chr3_-_8119490 0.73 AT3G22910.1
AT3G22910
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr1_+_8336593 0.73 AT1G23490.1
ARF1
ADP-ribosylation factor 1
Chr3_+_2288732 0.73 AT3G07195.1
AT3G07195.2
AT3G07195
RPM1-interacting protein 4 (RIN4) family protein
Chr2_-_15790139 0.72 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
Chr2_+_14726800 0.72 AT2G34910.1
AT2G34910
root hair specific protein
Chr5_-_18506382 0.72 AT5G45630.1
AT5G45630
senescence regulator (Protein of unknown function, DUF584)
Chr1_-_27646743 0.71 AT1G73540.1
NUDT21
nudix hydrolase homolog 21
Chr3_+_6228342 0.70 AT3G18170.1
AT3G18170
Glycosyltransferase family 61 protein
Chr3_-_22811024 0.70 AT3G61640.1
AGP20
arabinogalactan protein 20
Chr2_+_17640546 0.70 AT2G42360.1
AT2G42360
RING/U-box superfamily protein
Chr5_-_23855275 0.70 AT5G59090.2
AT5G59090.3
SBT4.12
subtilase 4.12
Chr3_+_8960095 0.70 AT3G24550.1
PERK1
proline extensin-like receptor kinase 1
Chr5_+_20900859 0.69 AT5G51460.1
AT5G51460.4
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_24000166 0.69 AT5G59550.2
RDUF2
zinc finger (C3HC4-type RING finger) family protein
Chr1_+_21237839 0.68 AT1G56660.1
AT1G56660.2
AT1G56660
MAEBL domain protein
Chr3_+_18973126 0.68 AT3G51080.1
GATA6
GATA transcription factor 6
Chr4_-_17033972 0.68 AT4G35985.3
AT4G35985.2
AT4G35985
Senescence/dehydration-associated protein-like protein
Chr5_-_23999837 0.68 AT5G59550.1
RDUF2
zinc finger (C3HC4-type RING finger) family protein
Chr3_+_20791173 0.68 AT3G56030.1
AT3G56030
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_6227341 0.67 AT3G18170.2
AT3G18170
Glycosyltransferase family 61 protein
Chr5_-_7820760 0.67 AT5G23220.1
NIC3
nicotinamidase 3
Chr2_-_15789605 0.67 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
Chr3_+_20296130 0.67 AT3G54810.2
BME3
Plant-specific GATA-type zinc finger transcription factor family protein
Chr4_-_2589184 0.66 AT4G05050.3
AT4G05050.4
AT4G05050.2
AT4G05050.1
UBQ11
ubiquitin 11
Chr1_-_4291017 0.66 AT1G12610.1
DDF1
Integrase-type DNA-binding superfamily protein
Chr5_-_23507353 0.66 AT5G58090.1
AT5G58090
O-Glycosyl hydrolases family 17 protein
Chr5_-_23873691 0.66 AT5G59130.1
AT5G59130.2
AT5G59130.3
AT5G59130.4
AT5G59130
Subtilase family protein
Chr2_+_7673145 0.65 AT2G17660.1
AT2G17660
RPM1-interacting protein 4 (RIN4) family protein
Chr3_-_19174739 0.65 AT3G51680.1
SDR2
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_+_20296416 0.65 AT3G54810.1
BME3
Plant-specific GATA-type zinc finger transcription factor family protein
Chr4_-_17711031 0.65 AT4G37700.1
AT4G37700
hypothetical protein
Chr2_+_12947884 0.64 AT2G30380.1
AT2G30380
MYB family transcription factor
Chr3_-_23222995 0.64 AT3G62780.1
AT3G62780
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr2_+_18842516 0.63 AT2G45750.1
AT2G45750
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_29364072 0.63 AT1G78080.1
RAP2.4
related to AP2 4
Chr5_-_23855499 0.63 AT5G59090.1
SBT4.12
subtilase 4.12
Chr1_+_1843463 0.63 AT1G06080.1
AT1G06080.2
ADS1
delta 9 desaturase 1
Chr2_+_19197330 0.63 AT2G46720.1
KCS13
3-ketoacyl-CoA synthase 13
Chr4_+_13320408 0.62 AT4G26330.1
AT4G26330.2
UNE17
Subtilisin-like serine endopeptidase family protein
Chr3_-_22651598 0.62 AT3G61190.2
AT3G61190.1
BAP1
BON association protein 1
Chr3_-_11013451 0.62 AT3G29030.1
EXPA5
expansin A5
Chr3_-_4227528 0.62 AT3G13140.1
AT3G13140
hydroxyproline-rich glycoprotein family protein
Chr5_+_3398790 0.61 AT5G10750.1
AT5G10750
enhanced disease resistance-like protein (DUF1336)
Chr3_-_8378305 0.61 AT3G23400.4
AT3G23400.2
AT3G23400.3
AT3G23400.1
FIB4
Plastid-lipid associated protein PAP / fibrillin family protein
Chr5_-_5356353 0.60 AT5G16360.1
AT5G16360
NC domain-containing protein-like protein
Chr3_-_4660945 0.60 AT3G14067.1
AT3G14067
Subtilase family protein
Chr2_+_12042348 0.59 AT2G28250.3
NCRK
Protein kinase superfamily protein
Chr5_+_2169425 0.59 AT5G06990.1
AT5G06990
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr5_-_2622900 0.58 AT5G08150.1
SOB5
suppressor of phytochrome b 5
Chr1_-_4530222 0.58 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr5_+_3532402 0.57 AT5G11100.1
SYTD
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr4_+_17935402 0.56 AT4G38250.1
AT4G38250
Transmembrane amino acid transporter family protein
Chr2_+_17140183 0.56 AT2G41110.1
AT2G41110.2
CAM2
calmodulin 2
Chr2_+_2055519 0.56 AT2G05580.1
AT2G05580
Glycine-rich protein family
Chr1_+_28163344 0.56 AT1G75000.1
AT1G75000
GNS1/SUR4 membrane protein family
Chr1_-_10690838 0.56 AT1G30330.2
AT1G30330.1
AT1G30330.3
ARF6
auxin response factor 6
Chr2_+_12042944 0.54 AT2G28250.2
AT2G28250.4
NCRK
Protein kinase superfamily protein
Chr1_+_26113575 0.54 AT1G69470.1
AT1G69470
heat shock protein-binding protein
Chr2_+_3618058 0.54 AT2G08986.1
AT2G08986
hypothetical protein
Chr2_-_11968712 0.54 AT2G28085.1
AT2G28085
SAUR-like auxin-responsive protein family
Chr5_+_20901537 0.52 AT5G51460.3
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr3_-_11785377 0.52 AT3G30160.1
AT3G30160
transmembrane protein
Chr3_-_16487349 0.51 AT3G45070.1
AT3G45070.3
AT3G45070.2
AT3G45070
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_+_17349218 0.50 AT4G36830.2
AT4G36830.1
HOS3-1
GNS1/SUR4 membrane protein family
Chr5_+_24102814 0.50 AT5G59820.1
RHL41
C2H2-type zinc finger family protein
Chr4_-_17034244 0.50 AT4G35985.1
AT4G35985
Senescence/dehydration-associated protein-like protein
Chr5_+_25233881 0.49 AT5G62865.1
AT5G62865
hypothetical protein
Chr1_-_23045291 0.49 AT1G62320.1
AT1G62320.2
AT1G62320.3
AT1G62320
ERD (early-responsive to dehydration stress) family protein
Chr5_-_3705129 0.49 AT5G11540.1
GulLO3
D-arabinono-1,4-lactone oxidase family protein
Chr1_+_22011305 0.49 AT1G59820.1
ALA3
aminophospholipid ATPase 3
Chr3_+_19534585 0.49 AT3G52710.1
AT3G52710
hypothetical protein
Chr5_+_20901835 0.49 AT5G51460.5
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr3_-_3947039 0.49 AT3G12410.1
AT3G12410
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr3_-_5762264 0.49 AT3G16860.1
COBL8
COBRA-like protein 8 precursor
Chr1_+_28891976 0.48 AT1G76920.1
AT1G76920
F-box family protein
Chr5_+_437365 0.48 AT5G02200.2
AT5G02200.1
FHL
far-red-elongated hypocotyl1-like protein
Chr2_+_12043386 0.47 AT2G28250.1
AT2G28250.5
AT2G28250.6
NCRK
Protein kinase superfamily protein
Chr5_-_25132716 0.47 AT5G62600.1
MOS14
ARM repeat superfamily protein
Chr5_+_20902087 0.47 AT5G51460.2
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr1_+_11337536 0.47 AT1G31670.1
AT1G31670
Copper amine oxidase family protein
Chr5_-_20706842 0.47 AT5G50900.1
AT5G50900
ARM repeat superfamily protein
Chr4_-_18068293 0.46 AT4G38660.1
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr1_-_2621545 0.46 AT1G08315.1
AT1G08315
ARM repeat superfamily protein
Chr5_+_15928765 0.45 AT5G39785.1
AT5G39785.3
AT5G39785.4
AT5G39785
hypothetical protein (DUF1666)
Chr1_-_23392873 0.45 AT1G63090.1
PP2-A11
phloem protein 2-A11
Chr5_+_15929188 0.44 AT5G39785.5
AT5G39785.2
AT5G39785
hypothetical protein (DUF1666)
Chr5_-_13364411 0.44 AT5G35110.1
AT5G35110
hypothetical protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G16150

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.6 GO:0035264 multicellular organism growth(GO:0035264)
0.6 1.8 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.6 1.8 GO:0010446 response to alkaline pH(GO:0010446)
0.4 2.2 GO:0043290 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.3 1.0 GO:0071258 cellular response to gravity(GO:0071258)
0.3 2.3 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.3 1.8 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.3 1.8 GO:0046209 nitric oxide metabolic process(GO:0046209)
0.2 0.7 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.2 1.9 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.2 1.2 GO:0019310 inositol catabolic process(GO:0019310)
0.2 1.1 GO:0046208 spermine catabolic process(GO:0046208)
0.2 0.5 GO:0019368 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.2 1.3 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.2 1.0 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.2 0.8 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.2 2.3 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.1 0.8 GO:0002230 positive regulation of defense response to virus by host(GO:0002230)
0.1 1.5 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.1 0.5 GO:0045332 phospholipid translocation(GO:0045332)
0.1 2.6 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.1 0.3 GO:0043470 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.1 0.3 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
0.1 0.9 GO:0000187 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.1 0.3 GO:0030638 polyketide metabolic process(GO:0030638)
0.1 0.9 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.1 1.4 GO:0051865 protein autoubiquitination(GO:0051865)
0.1 0.8 GO:0009061 anaerobic respiration(GO:0009061)
0.1 3.9 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.1 1.2 GO:0006560 proline metabolic process(GO:0006560)
0.1 4.2 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 1.4 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.1 0.2 GO:0016110 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.1 2.3 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.1 1.1 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 0.7 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 1.3 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.1 0.4 GO:0071732 cellular response to nitric oxide(GO:0071732)
0.1 0.4 GO:0046865 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865)
0.1 15.4 GO:0071456 cellular response to hypoxia(GO:0071456)
0.1 2.1 GO:0071472 cellular response to salt stress(GO:0071472)
0.1 1.4 GO:0010193 response to ozone(GO:0010193)
0.1 0.7 GO:0030497 fatty acid elongation(GO:0030497)
0.1 0.6 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 0.4 GO:0072659 protein localization to plasma membrane(GO:0072659)
0.0 0.2 GO:0046786 viral replication complex formation and maintenance(GO:0046786)
0.0 2.5 GO:0002239 response to oomycetes(GO:0002239)
0.0 0.5 GO:1902025 nitrate import(GO:1902025)
0.0 0.8 GO:0009682 induced systemic resistance(GO:0009682)
0.0 0.5 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.6 GO:0010274 hydrotropism(GO:0010274)
0.0 1.6 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 0.1 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.0 0.1 GO:0006527 arginine catabolic process(GO:0006527)
0.0 0.2 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.0 0.2 GO:0055122 response to very low light intensity stimulus(GO:0055122)
0.0 0.2 GO:0007266 Rho protein signal transduction(GO:0007266)
0.0 0.4 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.3 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.0 1.1 GO:0016117 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.0 1.0 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.6 GO:0015770 sucrose transport(GO:0015770)
0.0 0.4 GO:0009554 megasporogenesis(GO:0009554)
0.0 1.6 GO:0010089 xylem development(GO:0010089)
0.0 0.3 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.4 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.5 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 1.3 GO:0030433 ER-associated ubiquitin-dependent protein catabolic process(GO:0030433) ERAD pathway(GO:0036503)
0.0 0.8 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.6 GO:0009959 negative gravitropism(GO:0009959)
0.0 1.2 GO:0009631 cold acclimation(GO:0009631)
0.0 0.2 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.4 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.2 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) aromatic amino acid family biosynthetic process, prephenate pathway(GO:0009095) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.9 GO:0009407 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.1 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.4 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 2.0 GO:0010200 response to chitin(GO:0010200)
0.0 0.5 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.4 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.5 GO:0006606 protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744)
0.0 0.2 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.5 GO:0009690 cytokinin metabolic process(GO:0009690)
0.0 0.6 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.7 GO:0019722 calcium-mediated signaling(GO:0019722)
0.0 0.0 GO:0019932 second-messenger-mediated signaling(GO:0019932)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.3 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.2 1.3 GO:0071818 BAT3 complex(GO:0071818)
0.1 1.6 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 1.8 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.1 3.3 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.1 1.8 GO:0031012 extracellular matrix(GO:0031012)
0.1 1.0 GO:0045298 tubulin complex(GO:0045298)
0.1 14.6 GO:0031225 anchored component of membrane(GO:0031225)
0.0 2.2 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.4 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.0 0.4 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.6 GO:0005764 lysosome(GO:0005764)
0.0 3.0 GO:0009505 plant-type cell wall(GO:0009505)
0.0 1.8 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 1.6 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.2 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.2 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.0 0.9 GO:0010008 endosome membrane(GO:0010008)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.3 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.5 2.6 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.5 2.3 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.4 1.3 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.4 2.2 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.4 1.1 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.4 1.1 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.3 1.3 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.3 1.8 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.2 1.0 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.2 1.2 GO:0050113 inositol oxygenase activity(GO:0050113)
0.2 0.7 GO:0008936 nicotinamidase activity(GO:0008936)
0.2 1.4 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.1 1.8 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.1 1.3 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.1 0.7 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.1 3.0 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 1.2 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.1 0.8 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 2.3 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.3 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.1 0.5 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.1 0.6 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.1 1.5 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.4 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 1.3 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 0.2 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 0.9 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 0.3 GO:0016753 sinapoyltransferase activity(GO:0016752) O-sinapoyltransferase activity(GO:0016753)
0.1 1.2 GO:0035250 UDP-galactosyltransferase activity(GO:0035250)
0.1 0.6 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.5 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 0.2 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.1 1.1 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.1 0.4 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.1 1.3 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.0 1.3 GO:0051787 misfolded protein binding(GO:0051787)
0.0 1.5 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.9 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.4 GO:0048038 quinone binding(GO:0048038)
0.0 0.4 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.3 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.8 GO:0016843 amine-lyase activity(GO:0016843)
0.0 0.4 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 0.7 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.4 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.7 GO:0031386 protein tag(GO:0031386)
0.0 0.2 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.0 0.3 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.9 GO:0033293 monocarboxylic acid binding(GO:0033293)
0.0 0.5 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 0.5 GO:0005548 phospholipid transporter activity(GO:0005548)
0.0 2.7 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.1 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.4 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 1.5 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144)
0.0 0.4 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.3 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.8 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 1.1 GO:0051020 GTPase binding(GO:0051020)
0.0 0.7 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 4.5 GO:0005509 calcium ion binding(GO:0005509)
0.0 0.5 GO:0005179 hormone activity(GO:0005179)
0.0 0.2 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.0 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.0 0.5 GO:0008408 3'-5' exonuclease activity(GO:0008408)
0.0 1.0 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.3 PID PI3KCI PATHWAY Class I PI3K signaling events
0.3 1.6 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.1 0.7 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.0 0.2 PID CMYB PATHWAY C-MYB transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.1 0.7 REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA Genes involved in Processing of Capped Intron-Containing Pre-mRNA
0.1 0.9 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.7 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production