ISMARA results: AT4G14410

Project

GSE130291:vernalization in Arabidopsis thaliana

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Results for AT4G14410

Z-value: 0.32

Transcription factors associated with AT4G14410

Gene Symbol	Gene ID	Gene Info
AT4G14410 TAIR	AT4G14410	basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
bHLH104	arTal_v1_Chr4_+_8299778_8299778	0.29	3.1e-01	Click!

Activity profile of AT4G14410 motif

Sorted Z-values of AT4G14410 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr3_-_21085245_21085245 Show fit	0.96	AT3G56970.1	bHLH38 TAIR Show fit	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr2_-_17199320_17199454 Show fit	0.83	AT2G41240.2 AT2G41240.1	BHLH100 TAIR Show fit	basic helix-loop-helix protein 100
arTal_v1_Chr3_-_21087710_21087710 Show fit	0.61	AT3G56980.1	bHLH39 TAIR Show fit	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr5_-_1139631_1139633 Show fit	0.47	AT5G04150.2 AT5G04150.1	BHLH101 TAIR Show fit	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr3_-_8285081_8285081 Show fit	0.04	AT3G23210.1 AT3G23210.2	bHLH34 TAIR Show fit	basic helix-loop-helix (bHLH) DNA-binding superfamily protein

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Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G14410

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.3	2.9	GO:0010106	cellular response to iron ion starvation(GO:0010106)

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Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	2.9	GO:0090575	RNA polymerase II transcription factor complex(GO:0090575)

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Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	2.9	GO:0008134	transcription factor binding(GO:0008134)

Showing 1 to 1 of 1 entries

Results for AT4G14410

Z-value: 0.32

Transcription factors associated with AT4G14410

Activity-expression correlation:

Activity profile of AT4G14410 motif

Sorted Z-values of AT4G14410 motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G14410

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: