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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT4G06746

Z-value: 1.00

Transcription factors associated with AT4G06746

Gene Symbol Gene ID Gene Info
AT4G06746
AT4G06746 related to AP2 9

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
RAP2.9arTal_v1_Chr4_-_4074735_4074735-0.263.6e-01Click!

Activity profile of AT4G06746 motif

Sorted Z-values of AT4G06746 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_7421828 2.21 AT4G12520.1
AT4G12520
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_20203919 1.62 AT3G54580.1
AT3G54580
Proline-rich extensin-like family protein
Chr4_+_10703348 1.57 AT4G19680.1
AT4G19680.2
IRT2
iron regulated transporter 2
Chr3_-_1758807 1.54 AT3G05890.1
RCI2B
Low temperature and salt responsive protein family
Chr1_+_10991478 1.41 AT1G30870.1
AT1G30870
Peroxidase superfamily protein
Chr5_-_19040456 1.37 AT5G46900.1
AT5G46900
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_4087689 1.36 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
Chr1_+_20462940 1.26 AT1G54890.1
AT1G54890
Late embryogenesis abundant (LEA) protein-like protein
Chr3_-_8589754 1.21 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr2_+_17945662 1.19 AT2G43150.1
AT2G43150
Proline-rich extensin-like family protein
Chr1_+_8195776 1.13 AT1G23100.1
AT1G23100
GroES-like family protein
Chr1_-_22363854 1.11 AT1G60750.1
AT1G60750
NAD(P)-linked oxidoreductase superfamily protein
Chr1_+_6130025 1.11 AT1G17810.1
BETA-TIP
beta-tonoplast intrinsic protein
Chr2_-_17199320 1.09 AT2G41240.2
AT2G41240.1
BHLH100
basic helix-loop-helix protein 100
Chr3_+_5025184 1.07 AT3G14940.1
PPC3
phosphoenolpyruvate carboxylase 3
Chr3_+_5025383 1.07 AT3G14940.2
PPC3
phosphoenolpyruvate carboxylase 3
Chr4_-_17267472 1.06 AT4G36610.1
AT4G36610
alpha/beta-Hydrolases superfamily protein
Chr3_-_6236091 1.05 AT3G18200.1
AT3G18200.2
UMAMIT4
nodulin MtN21 /EamA-like transporter family protein
Chr1_+_26938369 1.03 AT1G71520.1
AT1G71520
Integrase-type DNA-binding superfamily protein
Chr1_-_6241510 1.02 AT1G18140.1
LAC1
laccase 1
Chr5_+_26818949 1.00 AT5G67210.1
IRX15-L
IRREGULAR XYLEM protein (DUF579)
Chr3_+_5471735 0.98 AT3G16150.1
ASPGB1
N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
Chr4_-_7493080 0.97 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr5_-_2090430 0.96 AT5G06760.1
LEA4-5
Late Embryogenesis Abundant 4-5
Chr5_+_6826365 0.95 AT5G20230.1
BCB
blue-copper-binding protein
Chr1_-_3880391 0.93 AT1G11545.1
XTH8
xyloglucan endotransglucosylase/hydrolase 8
Chr1_+_23168767 0.93 AT1G62570.1
FMO GS-OX4
flavin-monooxygenase glucosinolate S-oxygenase 4
Chr5_+_15742543 0.92 AT5G39320.1
UDG4
UDP-glucose 6-dehydrogenase family protein
Chr2_+_1676999 0.92 AT2G04780.2
FLA7
FASCICLIN-like arabinoogalactan 7
Chr3_-_3059148 0.92 AT3G09940.2
AT3G09940.1
MDHAR
monodehydroascorbate reductase
Chr5_-_23768111 0.91 AT5G58860.1
CYP86A1
cytochrome P450, family 86, subfamily A, polypeptide 1
Chr2_-_12621231 0.91 AT2G29440.1
GSTU6
glutathione S-transferase tau 6
Chr4_+_12827856 0.91 AT4G24960.1
AT4G24960.3
AT4G24960.2
HVA22D
HVA22 homologue D
Chr2_+_1676717 0.91 AT2G04780.1
FLA7
FASCICLIN-like arabinoogalactan 7
Chr2_+_17920647 0.89 AT2G43100.1
IPMI2
isopropylmalate isomerase 2
Chr5_-_4986377 0.88 AT5G15350.1
ENODL17
early nodulin-like protein 17
Chr5_-_17185032 0.88 AT5G42860.1
AT5G42860
late embryogenesis abundant protein, group 2
Chr4_-_17979740 0.88 AT4G38400.1
AT4G38401.1
EXLA2
AT4G38401
expansin-like A2
hypothetical protein
Chr5_-_8136150 0.85 AT5G24070.1
AT5G24070
Peroxidase superfamily protein
Chr4_-_17041131 0.85 AT4G36010.2
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr2_-_18744322 0.84 AT2G45470.1
FLA8
FASCICLIN-like arabinogalactan protein 8
Chr5_-_7820760 0.84 AT5G23220.1
NIC3
nicotinamidase 3
Chr4_-_17041326 0.84 AT4G36010.1
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr1_-_8559066 0.84 AT1G24170.1
LGT9
Nucleotide-diphospho-sugar transferases superfamily protein
Chr1_+_4069992 0.83 AT1G12040.1
LRX1
leucine-rich repeat/extensin 1
Chr4_-_11585542 0.83 AT4G21830.1
MSRB7
methionine sulfoxide reductase B7
Chr4_-_17606924 0.82 AT4G37450.1
AT4G37450.2
AGP18
arabinogalactan protein 18
Chr4_-_11585391 0.82 AT4G21830.2
MSRB7
methionine sulfoxide reductase B7
Chr3_-_565801 0.82 AT3G02640.1
AT3G02640
transmembrane protein
Chr2_+_14726800 0.81 AT2G34910.1
AT2G34910
root hair specific protein
Chr2_+_7275657 0.81 AT2G16760.1
AT2G16760
Calcium-dependent phosphotriesterase superfamily protein
Chr3_-_19497650 0.79 AT3G52561.1
AT3G52561
hypothetical protein
Chr1_-_28453820 0.78 AT1G75780.1
TUB1
tubulin beta-1 chain
Chr5_-_19977620 0.78 AT5G49280.1
AT5G49280
hydroxyproline-rich glycoprotein family protein
Chr3_+_8780238 0.77 AT3G24240.1
AT3G24240
Leucine-rich repeat receptor-like protein kinase family protein
Chr5_-_2359311 0.77 AT5G07450.1
CYCP4%3B3
cyclin p4;3
Chr2_+_9592956 0.77 AT2G22590.1
AT2G22590
UDP-Glycosyltransferase superfamily protein
Chr5_-_5030245 0.77 AT5G15490.1
UGD3
UDP-glucose 6-dehydrogenase family protein
Chr1_+_10985063 0.77 AT1G30850.1
RSH4
root hair specific 4
Chr4_+_10521259 0.77 AT4G19230.1
AT4G19230.2
CYP707A1
cytochrome P450, family 707, subfamily A, polypeptide 1
Chr5_+_22388782 0.76 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr2_-_18821889 0.76 AT2G45680.1
TCP9
TCP family transcription factor
Chr1_+_26555705 0.76 AT1G70460.1
PERK13
root hair specific 10
Chr5_+_16852628 0.75 AT5G42180.1
PER64
Peroxidase superfamily protein
Chr3_-_22972239 0.75 AT3G62020.2
AT3G62020.1
GLP10
germin-like protein 10
Chr3_-_17945106 0.74 AT3G48450.1
AT3G48450.2
AT3G48450
RPM1-interacting protein 4 (RIN4) family protein
Chr4_+_18539511 0.74 AT4G39980.1
DHS1
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1
Chr5_+_3580396 0.73 AT5G11230.1
AT5G11230
Nucleotide-sugar transporter family protein
Chr5_+_22388521 0.72 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr3_-_3108266 0.72 AT3G10080.1
AT3G10080.2
AT3G10080
RmlC-like cupins superfamily protein
Chr1_+_19958380 0.71 AT1G53470.1
MSL4
mechanosensitive channel of small conductance-like 4
Chr5_-_24987811 0.71 AT5G62210.1
AT5G62210
Embryo-specific protein 3, (ATS3)
Chr1_-_9890875 0.71 AT1G28290.2
AT1G28290.1
AGP31
arabinogalactan protein 31
Chr3_-_222827 0.70 AT3G01570.1
AT3G01570
Oleosin family protein
Chr5_+_8151907 0.70 AT5G24105.1
AGP41
arabinogalactan protein 41
Chr3_-_2334185 0.69 AT3G07320.1
AT3G07320
O-Glycosyl hydrolases family 17 protein
Chr1_-_3241863 0.69 AT1G09950.1
RAS1
RESPONSE TO ABA AND SALT 1
Chr2_-_8475153 0.68 AT2G19580.1
TET2
tetraspanin2
Chr5_+_24667873 0.68 AT5G61350.1
AT5G61350
Protein kinase superfamily protein
Chr4_-_14776247 0.67 AT4G30190.1
HA2
H[+]-ATPase 2
Chr4_-_14776058 0.66 AT4G30190.2
HA2
H[+]-ATPase 2
Chr5_+_5202696 0.66 AT5G15940.4
AT5G15940.3
AT5G15940.1
AT5G15940
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_+_19880504 0.65 AT3G53620.1
PPa4
pyrophosphorylase 4
Chr1_-_23460884 0.65 AT1G63245.1
CLE14
CLAVATA3/ESR-RELATED 14
Chr2_+_14436589 0.65 AT2G34190.1
AT2G34190
Xanthine/uracil permease family protein
Chr1_-_10184512 0.65 AT1G29160.1
AT1G29160
Dof-type zinc finger DNA-binding family protein
Chr5_+_5935038 0.65 AT5G17920.1
AT5G17920.2
ATMS1
Cobalamin-independent synthase family protein
Chr1_+_4105223 0.65 AT1G12110.1
NRT1.1
nitrate transporter 1.1
Chr4_+_160643 0.65 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr1_-_23008610 0.64 AT1G62280.1
SLAH1
SLAC1 homologue 1
Chr4_-_6443554 0.64 AT4G10390.1
AT4G10390
Protein kinase superfamily protein
Chr2_+_2763449 0.63 AT2G06850.1
AT2G06850.2
XTH4
xyloglucan endotransglucosylase/hydrolase 4
Chr2_-_16846194 0.62 AT2G40330.1
PYL6
PYR1-like 6
Chr4_-_15262412 0.62 AT4G31470.1
AT4G31470
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr2_+_1640058 0.61 AT2G04680.1
AT2G04680
Cysteine/Histidine-rich C1 domain family protein
Chr3_-_20361560 0.61 AT3G54950.1
pPLAIIIbeta
patatin-like protein 6
Chr5_-_20959409 0.61 AT5G51590.1
AT5G51590
AT hook motif DNA-binding family protein
Chr3_-_8902835 0.60 AT3G24480.1
AT3G24480
Leucine-rich repeat (LRR) family protein
Chr1_+_6643942 0.60 AT1G19230.2
AT1G19230
Riboflavin synthase-like superfamily protein
Chr2_-_292624 0.60 AT2G01660.2
AT2G01660.3
AT2G01660.1
PDLP6
plasmodesmata-located protein 6
Chr1_-_28915102 0.59 AT1G76952.1
IDL5
inflorescence deficient in abscission (IDA)-like 5
Chr4_-_6260259 0.59 AT4G09990.1
GXM2
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Chr5_+_5087219 0.59 AT5G15640.1
AT5G15640.2
AT5G15640
Mitochondrial substrate carrier family protein
Chr5_-_19328940 0.59 AT5G47700.2
AT5G47700.1
AT5G47700
60S acidic ribosomal protein family
Chr5_-_26193237 0.58 AT5G65530.1
AT5G65530
Protein kinase superfamily protein
Chr1_-_10122919 0.58 AT1G29020.1
AT1G29020.2
AT1G29020
Calcium-binding EF-hand family protein
Chr1_+_6644189 0.58 AT1G19230.1
AT1G19230
Riboflavin synthase-like superfamily protein
Chr3_-_4775258 0.58 AT3G14310.1
PME3
pectin methylesterase 3
Chr5_-_3427897 0.58 AT5G10840.1
EMP1
Endomembrane protein 70 protein family
Chr4_+_7924135 0.57 AT4G13615.1
AT4G13615
Uncharacterized protein family SERF
Chr1_+_4433605 0.57 AT1G12990.1
AT1G12990
beta-1,4-N-acetylglucosaminyltransferase family protein
Chr3_-_9723904 0.57 AT3G26520.1
TIP2
tonoplast intrinsic protein 2
Chr1_+_12064323 0.57 AT1G33260.1
AT1G33260
Protein kinase superfamily protein
Chr5_+_25891449 0.57 AT5G64750.1
ABR1
Integrase-type DNA-binding superfamily protein
Chr5_+_6556348 0.56 AT5G19440.1
AT5G19440
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_-_10030443 0.56 AT2G23560.1
MES7
methyl esterase 7
Chr1_+_22073352 0.56 AT1G59970.1
AT1G59970
Matrixin family protein
Chr3_-_4142548 0.56 AT3G12970.1
AT3G12970
serine/arginine repetitive matrix-like protein
Chr4_+_7758275 0.56 AT4G13340.1
LRX3
Leucine-rich repeat (LRR) family protein
Chr5_-_4423095 0.56 AT5G13700.1
PAO1
polyamine oxidase 1
Chr2_+_18052967 0.56 AT2G43480.1
AT2G43480
Peroxidase superfamily protein
Chr4_+_8084162 0.55 AT4G13990.1
AT4G13990.2
AT4G13990
Exostosin family protein
Chr1_+_12064509 0.55 AT1G33260.2
AT1G33260
Protein kinase superfamily protein
Chr4_+_15101065 0.55 AT4G30996.1
NKS1
ubiquitin-associated protein (DUF1068)
Chr1_+_20504901 0.54 AT1G54970.1
PRP1
proline-rich protein 1
Chr3_-_22280691 0.54 AT3G60280.1
UCC3
uclacyanin 3
Chr5_+_19116719 0.54 AT5G47060.1
AT5G47060.2
AT5G47060
hypothetical protein (DUF581)
Chr4_-_18098633 0.54 AT4G38770.1
PRP4
proline-rich protein 4
Chr2_+_12706627 0.53 AT2G29740.1
UGT71C2
UDP-glucosyl transferase 71C2
Chr1_+_12188678 0.53 AT1G33610.1
AT1G33610
Leucine-rich repeat (LRR) family protein
Chr3_+_4399836 0.53 AT3G13500.1
AT3G13500
hypothetical protein
Chr4_+_9556783 0.53 AT4G16980.1
AT4G16980
arabinogalactan-protein family
Chr1_+_310169 0.52 AT1G01900.1
SBTI1.1
subtilase family protein
Chr3_+_19513937 0.51 AT3G52630.2
AT3G52630.1
AT3G52630
Nucleic acid-binding, OB-fold-like protein
Chr5_-_22358381 0.51 AT5G55090.1
AT5G55090.2
MAPKKK15
mitogen-activated protein kinase kinase kinase 15
Chr4_-_17376279 0.51 AT4G36880.1
CP1
cysteine proteinase1
Chr2_-_14216054 0.51 AT2G33560.1
AT2G33560.2
BUBR1
BUB1-related (BUB1: budding uninhibited by benzymidazol 1)
Chr1_+_1279351 0.51 AT1G04610.1
YUC3
YUCCA 3
Chr1_-_224351 0.51 AT1G01610.1
GPAT4
glycerol-3-phosphate acyltransferase 4
Chr1_-_2501581 0.50 AT1G08050.1
AT1G08050
Zinc finger (C3HC4-type RING finger) family protein
Chr5_-_1754361 0.50 AT5G05820.1
AT5G05820
Nucleotide-sugar transporter family protein
Chr2_-_11759588 0.50 AT2G27510.1
FD3
ferredoxin 3
Chr5_+_6342220 0.50 AT5G19000.2
AT5G19000.1
AT5G19000.3
BPM1
BTB-POZ and MATH domain 1
Chr4_-_10185383 0.50 AT4G18430.1
RABA1e
RAB GTPase homolog A1E
Chr5_-_7055398 0.50 AT5G20830.2
SUS1
sucrose synthase 1
Chr5_-_7054713 0.49 AT5G20830.1
SUS1
sucrose synthase 1
Chr5_+_3889906 0.49 AT5G12050.1
AT5G12050
rho GTPase-activating protein
Chr4_-_7470737 0.49 AT4G12650.1
AT4G12650
Endomembrane protein 70 protein family
Chr3_-_5954091 0.49 AT3G17390.1
MTO3
S-adenosylmethionine synthetase family protein
Chr2_-_13747810 0.49 AT2G32380.1
AT2G32380
Transmembrane protein 97, Putative
Chr5_+_16236956 0.49 AT5G40540.1
AT5G40540.3
AT5G40540.2
AT5G40540.4
AT5G40540
Protein kinase superfamily protein
Chr4_-_13160565 0.49 AT4G25890.1
AT4G25890
60S acidic ribosomal protein family
Chr4_+_16927730 0.49 AT4G35720.1
AT4G35720
DUF241 domain protein, putative (DUF241)
Chr3_+_7275645 0.49 AT3G20810.1
AT3G20810.4
AT3G20810.2
AT3G20810.5
AT3G20810.3
JMJD5
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_-_5169185 0.49 AT2G12646.3
AT2G12646.2
AT2G12646.1
AT2G12646
PLATZ transcription factor family protein
Chr5_-_7054281 0.49 AT5G20830.3
SUS1
sucrose synthase 1
Chr5_+_6290358 0.49 AT5G18860.1
AT5G18860.2
NSH3
inosine-uridine preferring nucleoside hydrolase family protein
Chr4_+_8634508 0.49 AT4G15120.1
AT4G15120
VQ motif-containing protein
Chr3_-_4744263 0.49 AT3G14240.1
AT3G14240
Subtilase family protein
Chr2_-_15560755 0.49 AT2G37040.1
PAL1
PHE ammonia lyase 1
Chr5_-_5184948 0.48 AT5G15870.1
AT5G15870
glycosyl hydrolase family 81 protein
Chr3_-_2055576 0.48 AT3G06590.1
AT3G06590.3
AT3G06590.4
AT3G06590
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_+_13830827 0.48 AT4G27720.1
AT4G27720
Major facilitator superfamily protein
Chr5_+_6225956 0.48 AT5G18670.1
BMY3
beta-amylase 3
Chr3_+_8581890 0.48 AT3G23800.2
SBP3
selenium-binding protein 3
Chr5_-_5759817 0.48 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr1_-_1437763 0.48 AT1G05020.1
AT1G05020
ENTH/ANTH/VHS superfamily protein
Chr5_-_5759449 0.47 AT5G17460.4
AT5G17460.5
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr1_-_4704694 0.47 AT1G13710.1
CYP78A5
cytochrome P450, family 78, subfamily A, polypeptide 5
Chr1_-_25841686 0.47 AT1G68795.1
CLE12
CLAVATA3/ESR-RELATED 12
Chr3_-_3548877 0.47 AT3G11320.1
AT3G11320
Nucleotide-sugar transporter family protein
Chr3_-_19788843 0.47 AT3G53370.2
AT3G53370.1
AT3G53370
S1FA-like DNA-binding protein
Chr5_+_3799408 0.47 AT5G11790.2
AT5G11790.1
NDL2
N-MYC downregulated-like 2
Chr5_-_17755742 0.47 AT5G44110.2
AT5G44110.4
AT5G44110.3
AT5G44110.1
ABCI21
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_-_21312378 0.47 AT3G57560.1
NAGK
N-acetyl-l-glutamate kinase
Chr5_+_16768935 0.46 AT5G41900.1
AT5G41900
alpha/beta-Hydrolases superfamily protein
Chr5_+_19683809 0.46 AT5G48560.1
AT5G48560.2
AT5G48560
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_4615163 0.46 AT5G14310.1
CXE16
carboxyesterase 16
Chr1_-_17618991 0.46 AT1G47840.2
AT1G47840.1
HXK3
hexokinase 3
Chr1_+_23342211 0.46 AT1G63000.1
NRS/ER
nucleotide-rhamnose synthase/epimerase-reductase
Chr2_-_832619 0.46 AT2G02860.2
AT2G02860.1
SUT2
sucrose transporter 2
Chr2_-_14677398 0.46 AT2G34790.1
MEE23
FAD-binding Berberine family protein
Chr3_-_23218312 0.46 AT3G62760.1
ATGSTF13
Glutathione S-transferase family protein
Chr5_+_17760865 0.46 AT5G44130.1
FLA13
FASCICLIN-like arabinogalactan protein 13 precursor
Chr1_+_5543119 0.46 AT1G16190.1
AT1G16190.2
RAD23A
Rad23 UV excision repair protein family
Chr3_+_3352077 0.45 AT3G10710.1
RHS12
root hair specific 12
Chr4_+_12785226 0.45 AT4G24805.1
AT4G24805
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_8797349 0.45 AT5G25350.1
EBF2
EIN3-binding F box protein 2
Chr3_+_5133444 0.45 AT3G15240.2
AT3G15240
Serine/threonine-protein kinase WNK (With No Lysine)-like protein
Chr1_+_6331398 0.45 AT1G18400.2
AT1G18400.1
BEE1
BR enhanced expression 1
Chr1_-_20976372 0.45 AT1G56080.1
AT1G56080
interactor of constitutive active ROPs protein
Chr5_+_16323567 0.44 AT5G40780.1
LHT1
lysine histidine transporter 1
Chr2_-_8409012 0.44 AT2G19410.2
AT2G19410.3
AT2G19410.1
AT2G19410
U-box domain-containing protein kinase family protein
Chr5_+_21817128 0.44 AT5G53750.1
AT5G53750
CBS domain-containing protein
Chr1_-_20015038 0.44 AT1G53625.1
AT1G53625
hypothetical protein
Chr2_+_13580371 0.44 AT2G31940.1
AT2G31940
oxidoreductase/transition metal ion-binding protein
Chr4_-_9305763 0.44 AT4G16515.1
AT4G16515.2
RGF6
root meristem growth factor
Chr1_-_8535660 0.43 AT1G24130.1
AT1G24130
Transducin/WD40 repeat-like superfamily protein
Chr2_+_14003128 0.43 AT2G32990.1
GH9B8
glycosyl hydrolase 9B8
Chr5_+_5202466 0.43 AT5G15940.2
AT5G15940
NAD(P)-binding Rossmann-fold superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G06746

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.7 GO:0006024 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.3 1.3 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.3 1.0 GO:0016540 protein autoprocessing(GO:0016540)
0.3 1.5 GO:0072708 response to sorbitol(GO:0072708)
0.2 0.2 GO:0042353 fucose biosynthetic process(GO:0042353)
0.2 0.6 GO:0032411 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.2 0.8 GO:0050993 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.2 0.8 GO:0010507 negative regulation of autophagy(GO:0010507)
0.2 0.5 GO:0043181 cellular sodium ion homeostasis(GO:0006883) vacuolar sequestering(GO:0043181)
0.2 1.2 GO:0015689 molybdate ion transport(GO:0015689)
0.2 1.6 GO:0000304 response to singlet oxygen(GO:0000304)
0.2 0.5 GO:0046102 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.2 0.6 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.2 1.6 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 0.6 GO:0098609 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.1 0.6 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 0.3 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.1 0.4 GO:0031506 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506) response to cobalt ion(GO:0032025)
0.1 0.6 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.1 0.8 GO:0043090 amino acid import(GO:0043090)
0.1 0.5 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.1 0.5 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.1 1.1 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.7 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.1 1.9 GO:0006826 iron ion transport(GO:0006826)
0.1 0.5 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.1 0.5 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 0.3 GO:0055089 fatty acid homeostasis(GO:0055089)
0.1 0.3 GO:0017145 stem cell division(GO:0017145)
0.1 0.6 GO:1902969 mitotic DNA replication(GO:1902969)
0.1 0.4 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.1 0.3 GO:0009305 protein biotinylation(GO:0009305)
0.1 0.3 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 0.5 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.1 0.4 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 3.0 GO:0045492 xylan biosynthetic process(GO:0045492)
0.1 0.3 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.4 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.1 0.3 GO:0072698 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 1.0 GO:0009554 megasporogenesis(GO:0009554)
0.1 0.5 GO:0046345 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.4 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.1 0.3 GO:0034635 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.1 0.3 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.3 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.1 0.4 GO:0046208 spermine catabolic process(GO:0046208)
0.1 0.3 GO:0010353 response to trehalose(GO:0010353)
0.1 0.1 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.1 0.9 GO:0010158 abaxial cell fate specification(GO:0010158)
0.1 0.9 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.1 0.2 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 0.7 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.1 0.4 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.1 0.8 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.1 0.4 GO:0016572 histone phosphorylation(GO:0016572)
0.1 0.2 GO:0001738 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.9 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 0.3 GO:0048442 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 0.1 GO:1900369 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.1 0.2 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.1 0.3 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 0.3 GO:0097502 mannosylation(GO:0097502)
0.1 0.5 GO:0031542 positive regulation of anthocyanin biosynthetic process(GO:0031542)
0.1 0.5 GO:0071329 cellular response to disaccharide stimulus(GO:0071324) cellular response to sucrose stimulus(GO:0071329)
0.1 0.8 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 0.6 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.0 0.2 GO:0071836 nectar secretion(GO:0071836)
0.0 0.7 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 0.3 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.3 GO:0048830 adventitious root development(GO:0048830)
0.0 0.4 GO:0010358 leaf shaping(GO:0010358)
0.0 0.6 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.0 0.2 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.2 GO:0043409 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
0.0 0.2 GO:0033512 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.0 0.1 GO:0010198 synergid death(GO:0010198)
0.0 0.1 GO:0048451 petal formation(GO:0048451)
0.0 1.5 GO:0009825 multidimensional cell growth(GO:0009825)
0.0 0.7 GO:0043901 negative regulation of multi-organism process(GO:0043901)
0.0 0.8 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 1.2 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.2 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.0 0.3 GO:0008215 spermine biosynthetic process(GO:0006597) spermine metabolic process(GO:0008215)
0.0 0.3 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.0 2.2 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.3 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.2 GO:0051452 vacuolar acidification(GO:0007035) intracellular pH reduction(GO:0051452)
0.0 0.1 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.0 0.2 GO:0016099 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.0 0.2 GO:0016139 glycoside catabolic process(GO:0016139)
0.0 0.7 GO:0015770 sucrose transport(GO:0015770)
0.0 0.5 GO:0008214 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.0 0.8 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 1.5 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 0.2 GO:0010067 procambium histogenesis(GO:0010067)
0.0 0.1 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.0 2.3 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 2.0 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.0 0.6 GO:0019374 galactolipid metabolic process(GO:0019374)
0.0 0.9 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.2 GO:0009972 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.0 1.1 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.8 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.2 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.0 0.8 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.2 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 0.2 GO:0015846 polyamine transport(GO:0015846)
0.0 0.3 GO:0009799 specification of symmetry(GO:0009799)
0.0 0.7 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 0.1 GO:0033499 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.0 0.2 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.0 1.0 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.2 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 0.8 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 1.1 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.1 GO:0000256 allantoin catabolic process(GO:0000256)
0.0 0.3 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.2 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.3 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.1 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.0 0.3 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.0 0.2 GO:0016554 cytidine to uridine editing(GO:0016554)
0.0 0.9 GO:0016144 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.0 0.8 GO:0010197 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.3 GO:0007143 female meiotic division(GO:0007143)
0.0 0.2 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 1.0 GO:0051084 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.0 0.1 GO:0006884 cell volume homeostasis(GO:0006884)
0.0 0.3 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.3 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.2 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 0.1 GO:0080145 cysteine homeostasis(GO:0080145)
0.0 0.4 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.0 0.4 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.1 GO:0080117 secondary growth(GO:0080117)
0.0 0.2 GO:1900911 regulation of ethylene biosynthetic process(GO:0010364) regulation of sulfur amino acid metabolic process(GO:0031335) regulation of olefin metabolic process(GO:1900908) regulation of olefin biosynthetic process(GO:1900911)
0.0 0.1 GO:0019323 pentose catabolic process(GO:0019323)
0.0 0.1 GO:0035494 SNARE complex disassembly(GO:0035494)
0.0 0.8 GO:0009407 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.1 GO:0009819 drought recovery(GO:0009819)
0.0 0.8 GO:0010311 lateral root formation(GO:0010311)
0.0 0.3 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 0.1 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.0 0.4 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.2 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.4 GO:0032508 DNA duplex unwinding(GO:0032508)
0.0 0.1 GO:0010231 maintenance of seed dormancy(GO:0010231) inositol trisphosphate metabolic process(GO:0032957) maintenance of dormancy(GO:0097437)
0.0 0.3 GO:0033674 positive regulation of kinase activity(GO:0033674)
0.0 0.1 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 0.6 GO:0006487 protein N-linked glycosylation(GO:0006487)
0.0 0.2 GO:0046036 CTP biosynthetic process(GO:0006241) pyrimidine ribonucleoside triphosphate metabolic process(GO:0009208) pyrimidine ribonucleoside triphosphate biosynthetic process(GO:0009209) CTP metabolic process(GO:0046036)
0.0 0.1 GO:0010230 alternative respiration(GO:0010230)
0.0 0.7 GO:0006289 nucleotide-excision repair(GO:0006289)
0.0 0.1 GO:0046339 diacylglycerol metabolic process(GO:0046339)
0.0 0.1 GO:0071277 cellular response to calcium ion(GO:0071277)
0.0 0.3 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.2 GO:0080027 response to herbivore(GO:0080027)
0.0 0.1 GO:0009061 anaerobic respiration(GO:0009061)
0.0 0.1 GO:0070129 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.0 0.3 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.0 0.5 GO:0006414 translational elongation(GO:0006414)
0.0 0.2 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.2 GO:0071545 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.0 0.1 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.0 GO:0043903 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of viral process(GO:0050792)
0.0 0.9 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.4 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 0.1 GO:1902074 response to salt(GO:1902074)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:0070382 exocytic vesicle(GO:0070382)
0.2 0.6 GO:0043673 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.1 0.5 GO:0010330 cellulose synthase complex(GO:0010330)
0.1 0.4 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.1 0.4 GO:0032133 chromosome passenger complex(GO:0032133)
0.1 0.9 GO:0042555 MCM complex(GO:0042555)
0.1 0.5 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778) kinetochore microtubule(GO:0005828)
0.1 5.9 GO:0000138 Golgi trans cisterna(GO:0000138)
0.1 10.6 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 0.2 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.1 0.2 GO:0051233 spindle midzone(GO:0051233)
0.1 0.7 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.1 1.1 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.3 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.1 0.4 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 0.3 GO:0005845 mRNA cap binding complex(GO:0005845)
0.0 0.3 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.0 5.7 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.2 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.0 8.8 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.3 GO:0030139 endocytic vesicle(GO:0030139)
0.0 0.3 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.5 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 0.4 GO:0098827 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.0 0.3 GO:0005784 Sec61 translocon complex(GO:0005784)
0.0 0.3 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.7 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 0.1 GO:0034715 pICln-Sm protein complex(GO:0034715)
0.0 0.3 GO:0035861 site of double-strand break(GO:0035861)
0.0 0.2 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 0.1 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.0 0.3 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.2 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.0 0.4 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 1.6 GO:0005759 mitochondrial matrix(GO:0005759)
0.0 0.2 GO:0098852 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 4.9 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.9 GO:0090406 pollen tube(GO:0090406)
0.0 0.2 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 1.7 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 2.7 GO:0048046 apoplast(GO:0048046)
0.0 0.8 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.1 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.4 1.2 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.3 1.7 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.3 1.0 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.3 0.9 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.3 0.8 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.2 0.7 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.2 0.7 GO:0008936 nicotinamidase activity(GO:0008936)
0.2 0.9 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.2 1.6 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.2 0.9 GO:0008430 selenium binding(GO:0008430)
0.2 0.5 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.2 1.2 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.2 1.7 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.1 0.7 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 0.4 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.1 0.4 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.1 0.6 GO:0042085 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.1 0.4 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.1 0.4 GO:0005080 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.1 0.6 GO:0004001 adenosine kinase activity(GO:0004001)
0.1 0.5 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.1 0.5 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 2.1 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.3 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.1 0.5 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.4 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 1.9 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 0.4 GO:0035174 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.1 0.7 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.4 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.1 0.5 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 0.4 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.1 0.3 GO:0018271 biotin-[acetyl-CoA-carboxylase] ligase activity(GO:0004077) biotin-protein ligase activity(GO:0018271)
0.1 0.1 GO:0004031 aldehyde oxidase activity(GO:0004031)
0.1 1.7 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.8 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.4 GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity(GO:0035242)
0.1 0.4 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.1 0.6 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 1.2 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.5 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 0.6 GO:0017048 Rho GTPase binding(GO:0017048)
0.1 1.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.2 GO:0051010 microtubule plus-end binding(GO:0051010)
0.1 0.3 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.2 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.1 0.3 GO:0016768 spermine synthase activity(GO:0016768)
0.1 0.3 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.1 0.7 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.3 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 1.6 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.3 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.1 0.8 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 0.2 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.0 0.3 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.3 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.0 0.4 GO:0008083 growth factor activity(GO:0008083)
0.0 0.5 GO:0052736 beta-glucanase activity(GO:0052736)
0.0 0.3 GO:0001671 ATPase activator activity(GO:0001671)
0.0 1.3 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.4 GO:0005536 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.0 0.2 GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.0 0.2 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.0 1.0 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.1 GO:0016504 peptidase activator activity(GO:0016504)
0.0 0.2 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.4 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.0 0.1 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.0 1.5 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.8 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.3 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.4 GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.0 2.0 GO:0036442 hydrogen-exporting ATPase activity(GO:0036442)
0.0 1.0 GO:0008810 cellulase activity(GO:0008810)
0.0 0.2 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.0 0.1 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.0 0.6 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.1 GO:0015116 sulfate transmembrane transporter activity(GO:0015116) thiosulfate transmembrane transporter activity(GO:0015117)
0.0 0.5 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.0 0.3 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
0.0 0.5 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.4 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.0 0.1 GO:0005351 sugar:proton symporter activity(GO:0005351) cation:sugar symporter activity(GO:0005402)
0.0 0.2 GO:0016273 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.2 GO:0004126 cytidine deaminase activity(GO:0004126)
0.0 0.5 GO:0070628 proteasome binding(GO:0070628)
0.0 1.1 GO:0051087 chaperone binding(GO:0051087)
0.0 0.3 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 0.3 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.1 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.0 0.2 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.0 0.3 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.3 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.1 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.0 0.2 GO:0050551 myrcene synthase activity(GO:0050551)
0.0 0.2 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.0 0.2 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.3 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.5 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.3 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.2 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.3 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 1.2 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 3.4 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.2 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.0 0.1 GO:0048038 quinone binding(GO:0048038)
0.0 0.2 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 0.1 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.2 GO:0010011 auxin binding(GO:0010011)
0.0 0.3 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.1 GO:0004359 glutaminase activity(GO:0004359)
0.0 0.1 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.0 0.8 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.2 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.2 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.1 GO:0044540 L-cystine L-cysteine-lyase (deaminating)(GO:0044540)
0.0 0.7 GO:0043022 ribosome binding(GO:0043022)
0.0 0.6 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 1.3 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.4 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.1 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0 0.3 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.1 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 1.7 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.1 GO:0008022 protein C-terminus binding(GO:0008022)
0.0 0.1 GO:0009916 alternative oxidase activity(GO:0009916)
0.0 0.4 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.5 GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives(GO:0016857)
0.0 0.2 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.1 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 0.8 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.1 GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism(GO:0044769)
0.0 0.1 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 1.9 GO:0008514 organic anion transmembrane transporter activity(GO:0008514)
0.0 0.1 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.1 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.1 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.2 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 PID PI3KCI PATHWAY Class I PI3K signaling events
0.1 0.6 PID ATR PATHWAY ATR signaling pathway
0.0 0.3 PID CMYB PATHWAY C-MYB transcription factor network
0.0 0.1 PID HES HEY PATHWAY Notch-mediated HES/HEY network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.9 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.6 REACTOME REPAIR SYNTHESIS FOR GAP FILLING BY DNA POL IN TC NER Genes involved in Repair synthesis for gap-filling by DNA polymerase in TC-NER
0.1 0.2 REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC
0.0 0.7 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.1 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.0 0.1 REACTOME MEIOTIC SYNAPSIS Genes involved in Meiotic Synapsis
0.0 0.0 REACTOME FRS2 MEDIATED CASCADE Genes involved in FRS2-mediated cascade