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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT4G00250

Z-value: 1.29

Transcription factors associated with AT4G00250

Gene Symbol Gene ID Gene Info
AT4G00250
AT4G00250 DNA-binding storekeeper protein-related transcriptional regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT4G00250arTal_v1_Chr4_-_113982_113982-0.411.4e-01Click!

Activity profile of AT4G00250 motif

Sorted Z-values of AT4G00250 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_9829261 1.76 AT1G28135.1
AT1G28135
hypothetical protein
Chr4_+_18413775 1.02 AT4G39675.1
AT4G39675
hypothetical protein
Chr1_+_18546086 0.97 AT1G50050.2
AT1G50050.1
AT1G50050
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr4_-_2992618 0.95 AT4G05631.1
AT4G05631
hypothetical protein
Chr3_+_17920795 0.85 AT3G48390.1
AT3G48390
MA3 domain-containing protein
Chr5_-_20204595 0.84 AT5G49730.1
AT5G49730.2
FRO6
ferric reduction oxidase 6
Chr3_+_15983199 0.81 AT3G44300.1
NIT2
nitrilase 2
Chr4_-_13729002 0.80 AT4G27450.1
AT4G27450
aluminum induced protein with YGL and LRDR motifs
Chr5_-_22896734 0.73 AT5G56550.1
OXS3
oxidative stress 3
Chr2_+_16216752 0.73 AT2G38800.1
AT2G38800
Plant calmodulin-binding protein-like protein
Chr5_-_21453980 0.71 AT5G52900.1
MAKR6
membrane-associated kinase regulator
Chr1_+_27241696 0.70 AT1G72360.2
AT1G72360.3
AT1G72360.1
ERF73
Integrase-type DNA-binding superfamily protein
Chr1_+_25487682 0.69 AT1G67980.1
AT1G67980.2
CCOAMT
caffeoyl-CoA 3-O-methyltransferase
Chr4_-_7406994 0.67 AT4G12480.1
EARLI1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_2699257 0.66 AT3G08860.2
PYD4
PYRIMIDINE 4
Chr1_+_21887588 0.66 AT1G59590.1
ZCF37
ZCF37
Chr5_-_20208730 0.65 AT5G49740.3
AT5G49740.2
AT5G49740.1
FRO7
ferric reduction oxidase 7
Chr1_-_26474786 0.65 AT1G70290.2
AT1G70290.1
TPS8
trehalose-6-phosphatase synthase S8
Chr3_+_6313471 0.64 AT3G18390.1
EMB1865
CRS1 / YhbY (CRM) domain-containing protein
Chr3_-_2699420 0.64 AT3G08860.1
PYD4
PYRIMIDINE 4
Chr1_+_3157501 0.63 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
Chr1_-_5181374 0.62 AT1G15040.2
AT1G15040.1
GAT1_2.1
Class I glutamine amidotransferase-like superfamily protein
Chr4_-_13958107 0.62 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_+_8139114 0.62 AT1G22990.1
AT1G22990.2
HIPP22
Heavy metal transport/detoxification superfamily protein
Chr1_-_11972580 0.62 AT1G33055.1
AT1G33055
hypothetical protein
Chr3_-_399798 0.62 AT3G02170.2
AT3G02170.3
LNG2
longifolia2
Chr2_+_239669 0.62 AT2G01530.1
MLP329
MLP-like protein 329
Chr1_+_99865 0.60 AT1G01240.4
AT1G01240.2
AT1G01240.1
AT1G01240.3
AT1G01240.5
AT1G01240
transmembrane protein
Chr4_-_10591546 0.60 AT4G19420.3
AT4G19420.2
AT4G19420.1
AT4G19420
Pectinacetylesterase family protein
Chr2_+_17409370 0.60 AT2G41730.1
AT2G41730
calcium-binding site protein
Chr1_-_30404713 0.60 AT1G80920.1
J8
Chaperone DnaJ-domain superfamily protein
Chr2_-_18324561 0.60 AT2G44380.1
AT2G44380
Cysteine/Histidine-rich C1 domain family protein
Chr1_+_21030787 0.60 AT1G56200.1
AT1G56200.2
EMB1303
embryo defective 1303
Chr5_-_21992812 0.59 AT5G54190.2
AT5G54190.1
PORA
protochlorophyllide oxidoreductase A
Chr1_-_24048822 0.58 AT1G64720.1
CP5
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr5_+_7116687 0.58 AT5G20960.2
AO1
aldehyde oxidase 1
Chr2_-_19114173 0.58 AT2G46550.3
AT2G46550.1
AT2G46550.2
AT2G46550
transmembrane protein
Chr5_+_7116455 0.58 AT5G20960.1
AO1
aldehyde oxidase 1
Chr3_+_16216806 0.57 AT3G44670.2
AT3G44670.1
AT3G44670
Disease resistance protein (TIR-NBS-LRR class) family
Chr2_-_16603059 0.57 AT2G39800.2
AT2G39800.4
AT2G39800.3
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
Chr3_-_2175686 0.57 AT3G06880.1
AT3G06880.5
AT3G06880.4
AT3G06880.3
AT3G06880.2
AT3G06880
Transducin/WD40 repeat-like superfamily protein
Chr5_+_15555156 0.57 AT5G38850.1
AT5G38850
Disease resistance protein (TIR-NBS-LRR class)
Chr5_-_18026077 0.57 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr3_-_6650199 0.57 AT3G19200.1
AT3G19200
hypothetical protein
Chr3_-_16625043 0.57 AT3G45300.1
IVD
isovaleryl-CoA-dehydrogenase
Chr3_-_3025945 0.57 AT3G09850.1
AT3G09850
D111/G-patch domain-containing protein
Chr5_-_18768992 0.56 AT5G46270.2
AT5G46270.3
AT5G46270.4
AT5G46270.1
AT5G46270.5
AT5G46270
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_+_18132545 0.56 AT1G49010.1
AT1G49010
Duplicated homeodomain-like superfamily protein
Chr4_+_2554997 0.56 AT4G04990.1
AT4G04990
serine/arginine repetitive matrix-like protein (DUF761)
Chr5_+_18444607 0.56 AT5G45510.2
AT5G45510.1
AT5G45510
Leucine-rich repeat (LRR) family protein
Chr5_+_17968092 0.55 AT5G44572.1
AT5G44572
transmembrane protein
Chr4_-_9061833 0.55 AT4G15990.1
AT4G15990
hypothetical protein
Chr5_-_20720681 0.55 AT5G50920.1
CLPC1
CLPC homologue 1
Chr1_-_26434538 0.55 AT1G70200.1
AT1G70200
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr4_-_7893727 0.55 AT4G13575.1
AT4G13575.2
AT4G13575
hypothetical protein
Chr5_-_17486309 0.54 AT5G43520.1
AT5G43520
Cysteine/Histidine-rich C1 domain family protein
Chr5_-_25813620 0.54 AT5G64570.3
AT5G64570.2
AT5G64570.1
XYL4
beta-D-xylosidase 4
Chr2_+_16011233 0.54 AT2G38230.1
PDX1.1
pyridoxine biosynthesis 1.1
Chr2_+_8108898 0.54 AT2G18700.1
TPS11
trehalose phosphatase/synthase 11
Chr5_-_19530316 0.54 AT5G48160.2
AT5G48160.1
OBE2
potyvirus VPg interacting protein (DUF1423)
Chr1_-_5265103 0.53 AT1G15290.2
AT1G15290.1
AT1G15290
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_8175431 0.53 AT5G24150.2
AT5G24150.1
SQP1
FAD/NAD(P)-binding oxidoreductase family protein
Chr1_-_29518028 0.53 AT1G78450.1
AT1G78450
SOUL heme-binding family protein
Chr2_+_17582673 0.53 AT2G42190.2
AT2G42190.1
AT2G42190.3
AT2G42190
rho GTPase-activating gacO-like protein
Chr1_-_6802652 0.53 AT1G19660.2
AT1G19660.3
AT1G19660.1
AT1G19660
Wound-responsive family protein
Chr3_-_2329926 0.53 AT3G07310.2
AT3G07310.1
AT3G07310
phosphoserine aminotransferase, putative (DUF760)
Chr1_-_130570 0.53 AT1G01320.1
AT1G01320.3
AT1G01320.2
AT1G01320
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_+_25464712 0.53 AT1G67900.4
AT1G67900.3
AT1G67900.5
AT1G67900
Phototropic-responsive NPH3 family protein
Chr1_+_28053030 0.53 AT1G74670.1
GASA6
Gibberellin-regulated family protein
Chr1_-_1337849 0.53 AT1G04770.1
AT1G04770
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_9352444 0.52 AT3G25690.4
AT3G25690.5
AT3G25690.6
CHUP1
Hydroxyproline-rich glycoprotein family protein
Chr4_+_18130237 0.52 AT4G38860.1
AT4G38860
SAUR-like auxin-responsive protein family
Chr5_-_19504534 0.52 AT5G48110.1
AT5G48110
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Chr1_-_19052582 0.52 AT1G51400.1
AT1G51400
Photosystem II 5 kD protein
Chr1_+_21746354 0.52 AT1G58602.2
AT1G58602.1
AT1G58602
LRR and NB-ARC domains-containing disease resistance protein
Chr5_+_5279884 0.52 AT5G16180.2
AT5G16180.1
CRS1
maize chloroplast splicing factor-like protein
Chr3_+_16195848 0.51 AT3G44630.1
AT3G44630.4
AT3G44630.2
AT3G44630.3
AT3G44630
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_+_8395466 0.51 AT1G23730.2
AT1G23730.1
BCA3
beta carbonic anhydrase 3
Chr5_-_26547793 0.51 AT5G66490.1
AT5G66490
hypothetical protein
Chr4_-_6302744 0.51 AT4G10080.1
AT4G10080
transmembrane protein
Chr2_+_12588191 0.51 AT2G29300.2
AT2G29300.1
AT2G29300
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_+_1679307 0.51 AT2G04790.10
AT2G04790.6
AT2G04790.5
AT2G04790.7
AT2G04790.9
AT2G04790.8
AT2G04790.13
AT2G04790.12
AT2G04790.11
AT2G04790.14
AT2G04790.15
AT2G04790.16
AT2G04790.4
AT2G04790.3
AT2G04790.1
AT2G04790.2
AT2G04790
PTB domain engulfment adapter
Chr5_+_6006035 0.50 AT5G18170.1
GDH1
glutamate dehydrogenase 1
Chr3_-_18946621 0.50 AT3G51000.1
AT3G51000
alpha/beta-Hydrolases superfamily protein
Chr1_+_7496998 0.50 AT1G21410.1
AT1G21410.2
SKP2A
F-box/RNI-like superfamily protein
Chr5_+_5497524 0.50 AT5G16730.1
AT5G16730
weak chloroplast movement under blue light protein (DUF827)
Chr3_-_23065794 0.50 AT3G62330.1
AT3G62330.2
AT3G62330
Zinc knuckle (CCHC-type) family protein
Chr2_-_17202848 0.50 AT2G41250.1
AT2G41250
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr1_-_20893268 0.49 AT1G55860.1
UPL1
LOW protein: E3 ubiquitin ligase-like protein
Chr3_+_9353010 0.49 AT3G25690.2
AT3G25690.3
CHUP1
Hydroxyproline-rich glycoprotein family protein
Chr2_+_12597018 0.49 AT2G29340.2
AT2G29340.1
AT2G29340.3
AT2G29340.4
AT2G29340
NAD-dependent epimerase/dehydratase family protein
Chr3_+_5755714 0.49 AT3G16857.1
AT3G16857.2
RR1
response regulator 1
Chr5_+_9605484 0.49 AT5G27270.2
AT5G27270.3
AT5G27270.1
AT5G27270.4
AT5G27270.5
EMB976
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_22429495 0.49 AT5G55300.3
AT5G55300.2
AT5G55300.1
TOP1ALPHA
DNA topoisomerase I alpha
Chr1_-_9879433 0.49 AT1G28260.2
AT1G28260.1
AT1G28260
Telomerase activating protein Est1
Chr3_-_18348730 0.49 AT3G49490.1
AT3G49490
hypothetical protein
Chr2_+_7945998 0.49 AT2G18280.2
AT2G18280.1
TLP2
tubby like protein 2
Chr1_+_17847042 0.49 AT1G48300.1
DGAT3
diacylglycerol acyltransferase
Chr1_+_4461738 0.49 AT1G13090.1
AT1G13090.2
CYP71B28
cytochrome P450, family 71, subfamily B, polypeptide 28
Chr2_-_18184089 0.49 AT2G43900.1
AT2G43900.2
5PTase12
Endonuclease/exonuclease/phosphatase family protein
Chr5_-_16855741 0.49 AT5G42190.1
AT5G42190
E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Chr5_+_9984044 0.49 AT5G27950.2
AT5G27950.1
AT5G27950
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_5756356 0.48 AT3G16857.3
RR1
response regulator 1
Chr5_+_25345542 0.48 AT5G63190.1
AT5G63190.2
AT5G63190
MA3 domain-containing protein
Chr2_+_18347765 0.48 AT2G44460.2
BGLU28
beta glucosidase 28
Chr4_+_418327 0.48 AT4G00970.1
AT4G00970.2
CRK41
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Chr3_-_399960 0.48 AT3G02170.1
LNG2
longifolia2
Chr1_+_26122080 0.48 AT1G69490.1
NAP
NAC-like, activated by AP3/PI
Chr1_+_30290325 0.48 AT1G80570.1
AT1G80570.3
AT1G80570.2
AT1G80570
RNI-like superfamily protein
Chr1_+_29523982 0.48 AT1G78476.1
AT1G78476
hypothetical protein
Chr4_+_12137995 0.48 AT4G23180.1
AT4G23180.3
AT4G23180.2
CRK10
cysteine-rich RLK (RECEPTOR-like protein kinase) 10
Chr1_+_25464376 0.48 AT1G67900.2
AT1G67900.1
AT1G67900
Phototropic-responsive NPH3 family protein
Chr1_-_7565655 0.48 AT1G21580.9
AT1G21580.6
AT1G21580.7
AT1G21580.5
AT1G21580.8
AT1G21580.1
AT1G21580.3
AT1G21580.4
AT1G21580.2
AT1G21580
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr5_-_2501253 0.48 AT5G07820.1
AT5G07820
Plant calmodulin-binding protein-like protein
Chr1_-_3100695 0.47 AT1G09570.5
AT1G09570.1
AT1G09570.6
PHYA
phytochrome A
Chr4_+_11424666 0.47 AT4G21445.1
AT4G21445
receptor-interacting protein
Chr1_-_20719165 0.47 AT1G55490.1
AT1G55490.2
AT1G55490.4
AT1G55490.3
AT1G55490.5
CPN60B
chaperonin 60 beta
Chr3_+_8003898 0.47 AT3G22590.1
PHP
PLANT HOMOLOGOUS TO PARAFIBROMIN
Chr4_-_9492400 0.47 AT4G16860.2
RPP4
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_-_1605027 0.47 AT1G05460.2
AT1G05460.1
SDE3
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_-_3235289 0.47 AT3G10405.1
AT3G10405
vacuolar acid trehalase
Chr4_+_8475101 0.47 AT4G14760.3
AT4G14760.1
NET1B
kinase interacting (KIP1-like) family protein
Chr2_-_16603319 0.47 AT2G39800.1
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
Chr5_+_4122400 0.47 AT5G13010.1
EMB3011
RNA helicase family protein
Chr2_-_10446434 0.47 AT2G24580.1
AT2G24580
FAD-dependent oxidoreductase family protein
Chr5_-_26833903 0.47 AT5G67250.1
SKIP2
SKP1/ASK1-interacting protein 2
Chr4_+_16301027 0.47 AT4G34030.1
MCCB
3-methylcrotonyl-CoA carboxylase
Chr1_+_2034156 0.47 AT1G06645.1
AT1G06645
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_-_3595003 0.47 AT5G11260.2
AT5G11260.1
HY5
Basic-leucine zipper (bZIP) transcription factor family protein
Chr4_-_407142 0.46 AT4G00950.1
MEE47
hypothetical protein (DUF688)
Chr4_+_17243583 0.46 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr5_-_8186662 0.46 AT5G24160.2
AT5G24160.1
SQE6
squalene monooxygenase 6
Chr4_+_15731443 0.46 AT4G32620.1
AT4G32620.2
AT4G32620
Enhancer of polycomb-like transcription factor protein
Chr5_+_7529292 0.46 AT5G22640.3
AT5G22640.1
AT5G22640.2
emb1211
MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein
Chr1_+_5171181 0.46 AT1G15010.1
AT1G15010
mediator of RNA polymerase II transcription subunit
Chr1_-_23429603 0.46 AT1G63180.2
AT1G63180.1
UGE3
UDP-D-glucose/UDP-D-galactose 4-epimerase 3
Chr5_-_16813183 0.46 AT5G42030.3
AT5G42030.2
AT5G42030.1
ABIL4
ABL interactor-like protein 4
Chr5_+_6457026 0.46 AT5G19190.1
AT5G19190
hypothetical protein
Chr4_+_8875656 0.46 AT4G15545.1
AT4G15545
PH-response transcription factor
Chr2_+_14577083 0.46 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
Chr1_+_1018058 0.46 AT1G03970.1
GBF4
G-box binding factor 4
Chr5_-_7620079 0.46 AT5G22800.1
EMB1030
Alanyl-tRNA synthetase, class IIc
Chr5_+_8365601 0.46 AT5G24490.1
AT5G24490
30S ribosomal protein
Chr2_+_12481664 0.46 AT2G29060.1
AT2G29060.2
AT2G29060
GRAS family transcription factor
Chr5_-_23308680 0.46 AT5G57560.1
TCH4
Xyloglucan endotransglucosylase/hydrolase family protein
Chr1_-_28284036 0.46 AT1G75380.3
AT1G75380.1
AT1G75380.2
AT1G75380.4
BBD1
bifunctional nuclease in basal defense response 1
Chr4_+_13725546 0.46 AT4G27440.2
AT4G27440.1
PORB
protochlorophyllide oxidoreductase B
Chr2_+_8059106 0.45 AT2G18560.1
AT2G18560
UDP-Glycosyltransferase superfamily protein
Chr4_-_10590700 0.45 AT4G19420.4
AT4G19420
Pectinacetylesterase family protein
Chr2_-_15421866 0.45 AT2G36790.1
UGT73C6
UDP-glucosyl transferase 73C6
Chr5_-_24083528 0.45 AT5G59780.2
AT5G59780.1
AT5G59780.3
MYB59
myb domain protein 59
Chr2_-_761013 0.45 AT2G02710.2
AT2G02710.3
AT2G02710.4
AT2G02710.1
PLPB
PAS/LOV protein B
Chr5_-_7620278 0.45 AT5G22800.2
EMB1030
Alanyl-tRNA synthetase, class IIc
Chr1_-_3099830 0.45 AT1G09570.4
AT1G09570.3
PHYA
phytochrome A
Chr2_+_13814543 0.45 AT2G32540.1
CSLB04
cellulose synthase-like B4
Chr3_-_3608092 0.45 AT3G11450.1
AT3G11450
DnaJ and Myb-like DNA-binding domain-containing protein
Chr1_-_20804574 0.45 AT1G55675.1
AT1G55675
transmembrane protein
Chr3_-_22871612 0.45 AT3G61780.1
emb1703
embryo defective 1703
Chr1_+_27148261 0.45 AT1G72150.1
PATL1
PATELLIN 1
Chr2_+_9254378 0.45 AT2G21640.1
AT2G21640
marker for oxidative stress response protein
Chr5_-_18673551 0.45 AT5G46040.1
AT5G46040
Major facilitator superfamily protein
Chr1_-_7706198 0.45 AT1G21920.2
AT1G21920.1
AT1G21920
Histone H3 K4-specific methyltransferase SET7/9 family protein
Chr1_-_25758232 0.45 AT1G68590.2
PSRP3/1
Ribosomal protein PSRP-3/Ycf65
Chr1_-_5098270 0.44 AT1G14790.1
RDR1
RNA-dependent RNA polymerase 1
Chr5_-_19807853 0.44 AT5G48850.1
ATSDI1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_5788291 0.44 AT5G17550.2
AT5G17550.1
PEX19-2
peroxin 19-2
Chr2_+_18346306 0.44 AT2G44460.1
BGLU28
beta glucosidase 28
Chr3_-_5491332 0.44 AT3G16190.1
AT3G16190
Isochorismatase family protein
Chr1_+_11827359 0.44 AT1G32700.1
AT1G32700.2
AT1G32700
PLATZ transcription factor family protein
Chr4_-_15412451 0.44 AT4G31875.1
AT4G31875
hypothetical protein
Chr1_+_4153641 0.44 AT1G12240.1
ATBETAFRUCT4
Glycosyl hydrolases family 32 protein
Chr1_-_21539914 0.44 AT1G58180.4
AT1G58180.6
AT1G58180.3
AT1G58180.1
AT1G58180.2
AT1G58180.5
BCA6
beta carbonic anhydrase 6
Chr3_+_7946408 0.44 AT3G22420.4
AT3G22420.3
AT3G22420.5
AT3G22420.1
AT3G22420.2
AT3G22420.6
WNK2
with no lysine (K) kinase 2
Chr1_-_25758411 0.44 AT1G68590.1
PSRP3/1
Ribosomal protein PSRP-3/Ycf65
Chr2_+_14827360 0.44 AT2G35170.1
AT2G35170
Histone H3 K4-specific methyltransferase SET7/9 family protein
Chr2_-_1032625 0.44 AT2G03390.6
AT2G03390.3
AT2G03390.2
AT2G03390.4
AT2G03390.7
AT2G03390.5
AT2G03390.1
AT2G03390
uvrB/uvrC motif-containing protein
Chr1_-_2184193 0.44 AT1G07110.1
F2KP
fructose-2,6-bisphosphatase
Chr1_-_7652288 0.44 AT1G21770.1
AT1G21770
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr1_-_669919 0.44 AT1G02960.1
AT1G02960.4
AT1G02960.5
AT1G02960.2
AT1G02960.6
AT1G02960.3
AT1G02960
kinetochore protein
Chr4_+_9560078 0.44 AT4G16990.16
AT4G16990.17
AT4G16990.1
AT4G16990.3
AT4G16990.4
RLM3
disease resistance protein (TIR-NBS class)
Chr3_-_23450195 0.44 AT3G63500.1
AT3G63500.3
AT3G63500.2
TTA2
fibronectin type III domain protein (DUF1423)
Chr1_-_4651549 0.44 AT1G13600.1
bZIP58
basic leucine-zipper 58
Chr1_+_30359649 0.44 AT1G80790.2
AT1G80790.1
AT1G80790.3
FDM5
XH/XS domain-containing protein
Chr1_+_30117847 0.44 AT1G80070.1
SUS2
Pre-mRNA-processing-splicing factor
Chr1_-_24421361 0.44 AT1G65660.1
SMP1
Pre-mRNA splicing Prp18-interacting factor
Chr4_-_450642 0.44 AT4G01030.1
AT4G01030
pentatricopeptide (PPR) repeat-containing protein
Chr3_-_1832190 0.43 AT3G06070.1
AT3G06070
hypothetical protein
Chr1_+_25497145 0.43 AT1G68020.3
AT1G68020.1
ATTPS6
UDP-Glycosyltransferase / trehalose-phosphatase family protein
Chr2_-_16287967 0.43 AT2G39000.3
AT2G39000.2
AT2G39000.4
AT2G39000
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr3_-_20272504 0.43 AT3G54760.2
AT3G54760.1
AT3G54760
dentin sialophosphoprotein-like protein
Chr4_-_9935685 0.43 AT4G17880.1
MYC4
Basic helix-loop-helix (bHLH) DNA-binding family protein
Chr1_+_23952133 0.43 AT1G64490.1
AT1G64490
DEK, chromatin associated protein
Chr2_-_19370478 0.43 AT2G47180.1
GolS1
galactinol synthase 1
Chr4_+_9036169 0.43 AT4G15930.2
AT4G15930.1
AT4G15930
Dynein light chain type 1 family protein
Chr3_-_1624819 0.43 AT3G05600.2
AT3G05600.1
AT3G05600
alpha/beta-Hydrolases superfamily protein
Chr1_+_21167565 0.43 AT1G56510.1
WRR4
Disease resistance protein (TIR-NBS-LRR class)
Chr5_+_17526660 0.43 AT5G43630.2
AT5G43630.1
AT5G43630.3
AT5G43630.4
TZP
zinc knuckle (CCHC-type) family protein
Chr5_+_18856454 0.43 AT5G46500.4
AT5G46500.3
AT5G46500.1
AT5G46500
protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein
Chr3_+_16525245 0.43 AT3G45140.1
AT3G45140.2
LOX2
lipoxygenase 2
Chr5_-_24537244 0.43 AT5G60970.1
TCP5
TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G00250

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.3 GO:0010203 response to very low fluence red light stimulus(GO:0010203)
0.4 1.2 GO:1902347 response to strigolactone(GO:1902347)
0.3 0.8 GO:0035444 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
0.3 0.8 GO:0031054 pre-miRNA processing(GO:0031054)
0.3 1.0 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.2 0.7 GO:0017014 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.2 2.1 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.2 0.9 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.2 0.9 GO:0035865 cellular response to potassium ion(GO:0035865)
0.2 0.6 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
0.2 0.6 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.2 3.4 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.2 0.9 GO:0035627 ceramide transport(GO:0035627)
0.2 0.7 GO:0010618 aerenchyma formation(GO:0010618)
0.2 1.5 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.2 0.5 GO:1902586 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.2 0.9 GO:0080119 ER body organization(GO:0080119)
0.2 1.2 GO:0090059 protoxylem development(GO:0090059)
0.2 1.0 GO:1902326 positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.2 1.0 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.2 0.5 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.2 0.5 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.2 0.7 GO:0045046 protein import into peroxisome membrane(GO:0045046)
0.2 0.5 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
0.2 0.6 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 0.5 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.2 3.1 GO:1901401 regulation of tetrapyrrole metabolic process(GO:1901401)
0.2 0.5 GO:0033120 positive regulation of RNA splicing(GO:0033120)
0.2 1.4 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.2 1.2 GO:0009061 anaerobic respiration(GO:0009061)
0.2 0.5 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.2 0.5 GO:0042908 xenobiotic transport(GO:0042908)
0.2 0.9 GO:0034059 response to anoxia(GO:0034059)
0.2 0.8 GO:0019323 pentose catabolic process(GO:0019323)
0.1 0.7 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.1 1.3 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.1 0.1 GO:1903959 regulation of anion transmembrane transport(GO:1903959)
0.1 0.7 GO:0009558 embryo sac cellularization(GO:0009558)
0.1 0.3 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.1 0.4 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 0.5 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 0.9 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.1 0.8 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 1.0 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 1.2 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 0.8 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.1 0.4 GO:0048872 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.1 0.5 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.1 0.6 GO:0060151 peroxisome localization(GO:0060151)
0.1 0.8 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 0.5 GO:1900109 histone H3-K9 dimethylation(GO:0036123) regulation of histone H3-K9 dimethylation(GO:1900109)
0.1 0.5 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.1 0.4 GO:0051639 actin filament network formation(GO:0051639)
0.1 0.5 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.1 0.1 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.1 1.0 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 0.4 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.1 1.3 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.1 0.6 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.1 0.5 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.1 0.3 GO:1901654 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217) response to ketone(GO:1901654)
0.1 0.3 GO:0007019 microtubule depolymerization(GO:0007019)
0.1 1.6 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.1 0.6 GO:0045922 negative regulation of fatty acid metabolic process(GO:0045922)
0.1 0.4 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 0.6 GO:0042550 photosystem I stabilization(GO:0042550)
0.1 0.8 GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.1 0.3 GO:0010541 acropetal auxin transport(GO:0010541)
0.1 0.4 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.1 0.4 GO:0010219 regulation of vernalization response(GO:0010219)
0.1 0.3 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.1 0.4 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 0.3 GO:0034727 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.1 0.8 GO:0006000 fructose metabolic process(GO:0006000)
0.1 1.9 GO:0000373 Group II intron splicing(GO:0000373)
0.1 0.5 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.1 0.4 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.1 0.5 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.1 0.3 GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process(GO:1990116)
0.1 0.4 GO:0035494 SNARE complex disassembly(GO:0035494)
0.1 0.4 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.1 0.3 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.1 1.4 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.1 0.5 GO:0090342 regulation of cell aging(GO:0090342)
0.1 0.6 GO:0048439 flower morphogenesis(GO:0048439)
0.1 0.9 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 0.7 GO:0010067 procambium histogenesis(GO:0010067)
0.1 0.5 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.1 0.3 GO:0010024 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.1 0.5 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 0.5 GO:0008608 attachment of spindle microtubules to kinetochore(GO:0008608)
0.1 0.2 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.1 0.3 GO:0090549 response to carbon starvation(GO:0090549)
0.1 0.5 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 0.4 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.1 0.3 GO:0090143 nucleoid organization(GO:0090143)
0.1 0.7 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.1 0.3 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.1 0.3 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 0.7 GO:0097437 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.1 0.3 GO:0016584 nucleosome positioning(GO:0016584)
0.1 0.2 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.1 0.4 GO:0090065 regulation of production of siRNA involved in RNA interference(GO:0090065)
0.1 0.6 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.8 GO:0006775 fat-soluble vitamin metabolic process(GO:0006775) fat-soluble vitamin biosynthetic process(GO:0042362)
0.1 0.3 GO:0034982 mitochondrial protein processing(GO:0034982) cristae formation(GO:0042407)
0.1 0.3 GO:0036292 DNA rewinding(GO:0036292)
0.1 0.4 GO:0005980 glycogen catabolic process(GO:0005980)
0.1 0.3 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.1 0.2 GO:0033194 response to hydroperoxide(GO:0033194)
0.1 0.3 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 1.1 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.1 0.3 GO:0009107 lipoate biosynthetic process(GO:0009107)
0.1 0.3 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 0.6 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.1 0.9 GO:0010206 photosystem II repair(GO:0010206)
0.1 0.2 GO:0015909 long-chain fatty acid transport(GO:0015909)
0.1 0.2 GO:0018065 protein-cofactor linkage(GO:0018065)
0.1 0.5 GO:0010444 guard mother cell differentiation(GO:0010444)
0.1 1.8 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 0.4 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.1 1.1 GO:0032544 plastid translation(GO:0032544)
0.1 0.5 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.1 0.3 GO:0035308 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.1 0.8 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 0.7 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.3 GO:0006570 tyrosine metabolic process(GO:0006570)
0.1 0.8 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.1 0.2 GO:0030242 pexophagy(GO:0030242)
0.1 0.4 GO:0031112 positive regulation of microtubule polymerization or depolymerization(GO:0031112)
0.1 0.4 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.1 0.1 GO:0040014 regulation of multicellular organism growth(GO:0040014)
0.1 0.3 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.1 0.3 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.1 0.2 GO:1900032 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.1 0.3 GO:0000256 allantoin catabolic process(GO:0000256)
0.1 0.6 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 0.1 GO:0051647 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023) nucleus localization(GO:0051647)
0.1 0.1 GO:0031060 regulation of histone methylation(GO:0031060)
0.1 0.3 GO:0016045 detection of bacterium(GO:0016045)
0.1 0.3 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.1 0.2 GO:0010447 response to acidic pH(GO:0010447)
0.1 0.2 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.1 0.3 GO:0060919 auxin influx(GO:0060919)
0.1 0.2 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.1 0.7 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 0.4 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.1 0.3 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.1 0.5 GO:0006021 inositol biosynthetic process(GO:0006021)
0.1 0.6 GO:0009819 drought recovery(GO:0009819)
0.1 0.3 GO:0043479 pigmentation(GO:0043473) pigment accumulation(GO:0043476) pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 0.3 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.1 0.4 GO:0046717 acid secretion(GO:0046717)
0.1 0.1 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.1 0.3 GO:0007063 regulation of sister chromatid cohesion(GO:0007063)
0.1 0.5 GO:0042851 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.1 0.5 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.1 0.3 GO:0051289 protein homotetramerization(GO:0051289)
0.1 0.2 GO:0051298 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.1 0.4 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 0.3 GO:2000576 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.1 0.4 GO:0032456 endocytic recycling(GO:0032456)
0.1 0.3 GO:0010390 histone monoubiquitination(GO:0010390)
0.1 0.2 GO:2001294 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.1 0.2 GO:0010032 meiotic chromosome condensation(GO:0010032)
0.1 0.4 GO:0032204 regulation of telomere maintenance(GO:0032204)
0.1 0.2 GO:0010731 protein glutathionylation(GO:0010731)
0.1 0.2 GO:0046521 sphingoid catabolic process(GO:0046521)
0.1 0.5 GO:0042372 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.1 0.2 GO:0010587 miRNA catabolic process(GO:0010587)
0.1 0.2 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.1 0.2 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.1 0.1 GO:0034034 purine ribonucleotide catabolic process(GO:0009154) ribonucleotide catabolic process(GO:0009261) coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034)
0.1 0.2 GO:0097438 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.1 0.7 GO:2000144 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.1 0.7 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.1 0.5 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.1 1.0 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.1 0.3 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.1 0.3 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.1 0.2 GO:0000012 single strand break repair(GO:0000012)
0.1 0.2 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.1 0.2 GO:0045332 phospholipid translocation(GO:0045332)
0.1 0.2 GO:0090239 regulation of histone H4 acetylation(GO:0090239)
0.1 0.3 GO:0009228 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.1 0.4 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 0.7 GO:0006265 DNA topological change(GO:0006265)
0.1 2.2 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.1 2.0 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.1 0.8 GO:0052249 virus induced gene silencing(GO:0009616) modulation by symbiont of RNA levels in host(GO:0052018) modulation of RNA levels in other organism involved in symbiotic interaction(GO:0052249)
0.1 0.5 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.1 0.5 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.2 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.1 0.3 GO:0060148 positive regulation of posttranscriptional gene silencing(GO:0060148)
0.1 0.3 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.1 0.3 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.2 GO:0035493 SNARE complex assembly(GO:0035493)
0.1 0.4 GO:0042177 negative regulation of protein catabolic process(GO:0042177)
0.1 0.6 GO:0071333 cellular response to glucose stimulus(GO:0071333)
0.1 0.2 GO:0051972 regulation of telomerase activity(GO:0051972)
0.1 0.2 GO:0031441 negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA processing(GO:0050686) negative regulation of mRNA polyadenylation(GO:1900364) negative regulation of mRNA metabolic process(GO:1903312)
0.1 1.2 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.1 0.7 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.1 0.2 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.1 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.1 0.2 GO:1901379 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.1 0.4 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 0.2 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.1 0.4 GO:0051567 histone H3-K9 methylation(GO:0051567)
0.1 0.3 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.0 0.5 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.0 0.2 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.0 0.3 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.0 0.4 GO:0045815 positive regulation of gene expression, epigenetic(GO:0045815)
0.0 0.0 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.0 2.0 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.5 GO:0009750 response to fructose(GO:0009750)
0.0 0.3 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.0 0.2 GO:0016598 protein arginylation(GO:0016598)
0.0 0.8 GO:0009638 phototropism(GO:0009638)
0.0 0.6 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.0 0.3 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.0 0.3 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.0 0.3 GO:0019464 glycine catabolic process(GO:0006546) glycine decarboxylation via glycine cleavage system(GO:0019464)
0.0 0.2 GO:0060969 negative regulation of posttranscriptional gene silencing(GO:0060149) negative regulation of gene silencing(GO:0060969)
0.0 0.5 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.2 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.0 0.2 GO:0070601 centromeric sister chromatid cohesion(GO:0070601)
0.0 0.3 GO:0007035 vacuolar acidification(GO:0007035) intracellular pH reduction(GO:0051452)
0.0 0.5 GO:0080111 DNA demethylation(GO:0080111)
0.0 0.3 GO:0019243 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.1 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.0 0.2 GO:2000769 establishment or maintenance of cell polarity regulating cell shape(GO:0071963) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769)
0.0 0.5 GO:0007050 cell cycle arrest(GO:0007050)
0.0 0.2 GO:0046825 regulation of protein export from nucleus(GO:0046825)
0.0 1.6 GO:0051667 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.0 0.3 GO:0060966 regulation of gene silencing by RNA(GO:0060966)
0.0 0.2 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.0 0.2 GO:0051096 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.1 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.0 0.3 GO:0008272 sulfate transport(GO:0008272)
0.0 0.2 GO:0051205 protein insertion into membrane(GO:0051205)
0.0 0.2 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.0 0.3 GO:0044211 CTP salvage(GO:0044211)
0.0 0.8 GO:0046838 phosphorylated carbohydrate dephosphorylation(GO:0046838)
0.0 0.1 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.0 0.0 GO:0046149 pigment catabolic process(GO:0046149)
0.0 0.1 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.0 0.3 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 0.2 GO:1903321 negative regulation of protein modification by small protein conjugation or removal(GO:1903321)
0.0 0.8 GO:0043488 regulation of mRNA stability(GO:0043488)
0.0 0.2 GO:0018871 1-aminocyclopropane-1-carboxylate metabolic process(GO:0018871)
0.0 0.4 GO:0051568 histone H3-K4 methylation(GO:0051568)
0.0 0.2 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.0 0.1 GO:1990428 miRNA transport(GO:1990428)
0.0 0.1 GO:0071483 cellular response to blue light(GO:0071483)
0.0 0.6 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.2 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.2 GO:0000301 retrograde transport, vesicle recycling within Golgi(GO:0000301)
0.0 0.9 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 0.1 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.0 1.0 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.0 0.7 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.1 GO:0008645 hexose transport(GO:0008645) fructose transport(GO:0015755)
0.0 0.5 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.3 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.0 0.1 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.0 0.1 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.0 0.4 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.0 0.7 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.0 0.6 GO:0051260 protein homooligomerization(GO:0051260)
0.0 0.1 GO:0008153 para-aminobenzoic acid biosynthetic process(GO:0008153)
0.0 0.1 GO:0019695 choline metabolic process(GO:0019695)
0.0 0.2 GO:0000023 maltose metabolic process(GO:0000023)
0.0 0.3 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.0 0.1 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.1 GO:0006788 heme oxidation(GO:0006788)
0.0 0.1 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.0 0.1 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.0 0.3 GO:0046654 tetrahydrofolate biosynthetic process(GO:0046654)
0.0 0.3 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 0.2 GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290)
0.0 0.4 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.1 GO:0043486 histone exchange(GO:0043486)
0.0 0.1 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.0 0.2 GO:0016926 protein desumoylation(GO:0016926)
0.0 0.2 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.0 0.4 GO:0052317 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.0 0.3 GO:0042732 D-xylose metabolic process(GO:0042732)
0.0 0.1 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.0 0.2 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.1 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.0 0.1 GO:0010480 microsporocyte differentiation(GO:0010480)
0.0 1.0 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.3 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.0 0.1 GO:0046705 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.0 0.2 GO:0010098 suspensor development(GO:0010098)
0.0 0.2 GO:0009590 detection of gravity(GO:0009590)
0.0 0.1 GO:0006434 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.0 0.4 GO:0000919 cell plate assembly(GO:0000919)
0.0 0.7 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.1 GO:0010042 response to manganese ion(GO:0010042)
0.0 0.1 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.0 0.5 GO:0001709 cell fate determination(GO:0001709)
0.0 1.0 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.1 GO:0051211 anisotropic cell growth(GO:0051211)
0.0 0.3 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.2 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.0 0.1 GO:1901334 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.0 0.1 GO:0006678 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.0 0.1 GO:0007041 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.0 0.5 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.3 GO:0009880 embryonic pattern specification(GO:0009880)
0.0 0.2 GO:0000719 photoreactive repair(GO:0000719) UV protection(GO:0009650)
0.0 0.1 GO:0006560 proline metabolic process(GO:0006560)
0.0 0.1 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.0 0.1 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.0 0.2 GO:0000132 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.0 0.3 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.0 0.1 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.0 0.1 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.0 0.6 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.2 GO:0046835 carbohydrate phosphorylation(GO:0046835)
0.0 0.4 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 0.4 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.0 0.1 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.0 0.0 GO:0033273 response to vitamin(GO:0033273)
0.0 0.5 GO:0006900 membrane budding(GO:0006900)
0.0 0.1 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.0 0.2 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.0 0.1 GO:0051016 negative regulation of actin filament depolymerization(GO:0030835) negative regulation of protein complex disassembly(GO:0043242) barbed-end actin filament capping(GO:0051016) actin filament capping(GO:0051693) negative regulation of protein depolymerization(GO:1901880)
0.0 1.0 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.0 0.2 GO:0030307 positive regulation of cell growth(GO:0030307)
0.0 0.1 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.0 0.1 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.3 GO:0051865 protein autoubiquitination(GO:0051865)
0.0 0.9 GO:0090174 organelle membrane fusion(GO:0090174)
0.0 0.1 GO:0071457 cellular response to ozone(GO:0071457)
0.0 0.3 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.0 0.4 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 1.0 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.0 0.2 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.0 0.1 GO:0080171 lytic vacuole organization(GO:0080171)
0.0 0.2 GO:0019253 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.0 0.3 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.3 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.2 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.4 GO:0010584 pollen exine formation(GO:0010584)
0.0 0.1 GO:0043461 proton-transporting ATP synthase complex assembly(GO:0043461) proton-transporting ATP synthase complex biogenesis(GO:0070272)
0.0 0.6 GO:0009960 endosperm development(GO:0009960)
0.0 0.2 GO:0006312 mitotic recombination(GO:0006312)
0.0 0.6 GO:0010091 trichome branching(GO:0010091)
0.0 1.8 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.2 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 0.4 GO:0008544 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.0 0.1 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.0 0.5 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.1 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.0 0.2 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.2 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.0 0.6 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 0.8 GO:0000741 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.5 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.0 0.7 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.0 0.1 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.0 0.2 GO:0010048 vernalization response(GO:0010048)
0.0 0.3 GO:0018022 peptidyl-lysine methylation(GO:0018022)
0.0 0.3 GO:0046653 tetrahydrofolate metabolic process(GO:0046653)
0.0 0.3 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.4 GO:0010257 NADH dehydrogenase complex assembly(GO:0010257)
0.0 0.3 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.0 0.1 GO:0042780 tRNA 3'-trailer cleavage(GO:0042779) tRNA 3'-end processing(GO:0042780)
0.0 0.1 GO:0009099 valine biosynthetic process(GO:0009099)
0.0 0.1 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.0 0.3 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.4 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.2 GO:0042659 regulation of cell fate specification(GO:0042659)
0.0 0.6 GO:0009625 response to insect(GO:0009625)
0.0 0.2 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.0 0.1 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.0 0.1 GO:0048655 anther morphogenesis(GO:0048654) anther wall tapetum morphogenesis(GO:0048655) protein storage vacuole organization(GO:1990019)
0.0 0.1 GO:0010394 homogalacturonan biosynthetic process(GO:0010289) homogalacturonan metabolic process(GO:0010394)
0.0 0.1 GO:0071331 cellular response to monosaccharide stimulus(GO:0071326) cellular response to hexose stimulus(GO:0071331)
0.0 0.2 GO:0032351 negative regulation of hormone metabolic process(GO:0032351)
0.0 0.1 GO:0009583 phototransduction(GO:0007602) detection of light stimulus(GO:0009583) red, far-red light phototransduction(GO:0009585)
0.0 0.4 GO:0009682 induced systemic resistance(GO:0009682)
0.0 0.1 GO:0006666 3-keto-sphinganine metabolic process(GO:0006666)
0.0 0.3 GO:0006282 regulation of DNA repair(GO:0006282)
0.0 0.1 GO:1900409 positive regulation of cellular response to oxidative stress(GO:1900409)
0.0 0.3 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.0 0.1 GO:0016558 protein import into peroxisome matrix(GO:0016558)
0.0 1.1 GO:0009627 systemic acquired resistance(GO:0009627)
0.0 1.6 GO:0009658 chloroplast organization(GO:0009658)
0.0 0.1 GO:0016540 protein autoprocessing(GO:0016540)
0.0 0.1 GO:0006544 glycine metabolic process(GO:0006544) glycine biosynthetic process(GO:0006545)
0.0 0.5 GO:0040034 regulation of development, heterochronic(GO:0040034)
0.0 0.2 GO:0006826 iron ion transport(GO:0006826)
0.0 0.1 GO:0045116 protein neddylation(GO:0045116)
0.0 0.5 GO:0035304 regulation of protein dephosphorylation(GO:0035304)
0.0 0.3 GO:0031348 negative regulation of defense response(GO:0031348)
0.0 0.1 GO:0019563 alditol catabolic process(GO:0019405) glycerol catabolic process(GO:0019563)
0.0 0.8 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.0 0.4 GO:0006284 base-excision repair(GO:0006284)
0.0 0.2 GO:0006892 post-Golgi vesicle-mediated transport(GO:0006892)
0.0 0.1 GO:0080051 cutin transport(GO:0080051)
0.0 0.2 GO:0009405 pathogenesis(GO:0009405)
0.0 0.2 GO:0035196 production of miRNAs involved in gene silencing by miRNA(GO:0035196)
0.0 0.3 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.0 0.7 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.1 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.2 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.0 0.1 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.0 0.1 GO:0019433 triglyceride catabolic process(GO:0019433)
0.0 0.7 GO:0043039 amino acid activation(GO:0043038) tRNA aminoacylation(GO:0043039)
0.0 0.1 GO:0051050 positive regulation of transport(GO:0051050)
0.0 0.0 GO:0010288 response to lead ion(GO:0010288)
0.0 0.1 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 0.1 GO:0002757 pattern recognition receptor signaling pathway(GO:0002221) immune response-activating signal transduction(GO:0002757) innate immune response-activating signal transduction(GO:0002758) immune response-regulating signaling pathway(GO:0002764)
0.0 0.1 GO:0009704 de-etiolation(GO:0009704)
0.0 0.1 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.0 0.1 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.0 0.1 GO:0034227 tRNA thio-modification(GO:0034227)
0.0 0.1 GO:0043462 regulation of ATPase activity(GO:0043462)
0.0 1.1 GO:0000209 protein polyubiquitination(GO:0000209)
0.0 0.2 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.4 GO:0007062 sister chromatid cohesion(GO:0007062)
0.0 0.4 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.1 GO:0031542 positive regulation of anthocyanin metabolic process(GO:0031539) positive regulation of anthocyanin biosynthetic process(GO:0031542)
0.0 0.2 GO:0031647 regulation of protein stability(GO:0031647)
0.0 0.2 GO:0006997 nucleus organization(GO:0006997)
0.0 0.0 GO:0072698 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.0 0.2 GO:0048017 inositol lipid-mediated signaling(GO:0048017)
0.0 0.1 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.3 GO:0007093 mitotic cell cycle checkpoint(GO:0007093)
0.0 0.1 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.1 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.9 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.1 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.2 GO:0051028 mRNA export from nucleus(GO:0006406) mRNA transport(GO:0051028) mRNA-containing ribonucleoprotein complex export from nucleus(GO:0071427)
0.0 0.1 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.1 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 0.2 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.2 GO:0009612 response to mechanical stimulus(GO:0009612)
0.0 0.2 GO:0006415 translational termination(GO:0006415)
0.0 0.0 GO:0034969 histone arginine methylation(GO:0034969)
0.0 0.2 GO:0051495 positive regulation of protein polymerization(GO:0032273) positive regulation of cytoskeleton organization(GO:0051495)
0.0 0.0 GO:0051176 positive regulation of sulfur metabolic process(GO:0051176)
0.0 0.4 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 0.1 GO:0070828 heterochromatin organization(GO:0070828)
0.0 0.2 GO:0009142 nucleoside triphosphate biosynthetic process(GO:0009142)
0.0 0.1 GO:0036065 fucosylation(GO:0036065)
0.0 0.1 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.0 0.1 GO:0006013 mannose metabolic process(GO:0006013)
0.0 0.0 GO:0048480 stigma development(GO:0048480)
0.0 0.0 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.0 0.1 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.0 GO:0046900 tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.0 0.0 GO:0006760 folic acid-containing compound metabolic process(GO:0006760)
0.0 0.1 GO:0046512 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.0 0.9 GO:0018105 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.0 0.4 GO:0019762 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.0 0.3 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.0 GO:0006884 cell volume homeostasis(GO:0006884) potassium ion import(GO:0010107) potassium ion import across plasma membrane(GO:1990573)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 GO:0031897 Tic complex(GO:0031897)
0.2 0.5 GO:0060293 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.2 0.9 GO:0010007 magnesium chelatase complex(GO:0010007)
0.2 1.3 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.2 0.5 GO:0005775 vacuolar lumen(GO:0005775)
0.1 0.8 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.1 1.1 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.1 0.4 GO:0032432 actin filament bundle(GO:0032432)
0.1 0.5 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.1 1.0 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.1 0.3 GO:0005652 nuclear lamina(GO:0005652)
0.1 0.7 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 0.3 GO:1990112 RQC complex(GO:1990112)
0.1 0.4 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.1 0.8 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.1 0.6 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.1 0.3 GO:0070847 core mediator complex(GO:0070847)
0.1 0.4 GO:0034657 GID complex(GO:0034657)
0.1 0.2 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.1 0.8 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.1 1.1 GO:0008023 transcription elongation factor complex(GO:0008023)
0.1 0.2 GO:0009501 amyloplast(GO:0009501)
0.1 0.2 GO:0030427 site of polarized growth(GO:0030427)
0.1 0.2 GO:0033281 TAT protein transport complex(GO:0033281)
0.1 0.2 GO:0005712 chiasma(GO:0005712)
0.1 0.5 GO:0030897 HOPS complex(GO:0030897)
0.1 1.5 GO:0000229 cytoplasmic chromosome(GO:0000229)
0.1 0.4 GO:0071818 BAT3 complex(GO:0071818)
0.1 0.3 GO:1990752 microtubule end(GO:1990752)
0.1 0.3 GO:0031932 TORC2 complex(GO:0031932)
0.1 1.1 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.1 0.2 GO:0045334 clathrin-coated endocytic vesicle(GO:0045334)
0.1 0.7 GO:0010168 ER body(GO:0010168)
0.1 0.7 GO:0008278 cohesin complex(GO:0008278)
0.1 0.1 GO:0045254 pyruvate dehydrogenase complex(GO:0045254)
0.1 0.8 GO:0000815 ESCRT III complex(GO:0000815)
0.1 0.2 GO:1990298 bub1-bub3 complex(GO:1990298)
0.1 0.2 GO:0005813 centrosome(GO:0005813) centriole(GO:0005814)
0.1 0.3 GO:0030286 dynein complex(GO:0030286)
0.1 4.1 GO:0031977 thylakoid lumen(GO:0031977)
0.1 0.6 GO:0005844 polysome(GO:0005844)
0.1 0.3 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 0.3 GO:0000938 GARP complex(GO:0000938)
0.1 0.3 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.1 0.2 GO:0005942 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.1 0.4 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.1 0.5 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 0.2 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.1 0.9 GO:0042651 thylakoid membrane(GO:0042651)
0.1 0.5 GO:0098553 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.1 0.3 GO:0005776 autophagosome(GO:0005776)
0.1 0.4 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.0 0.5 GO:0031209 SCAR complex(GO:0031209)
0.0 2.7 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.4 GO:0070390 transcription export complex 2(GO:0070390)
0.0 0.4 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.0 3.2 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.2 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 1.0 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 2.6 GO:0031969 chloroplast membrane(GO:0031969)
0.0 0.2 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 0.7 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.0 0.2 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.2 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.0 0.7 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.5 GO:0000786 nucleosome(GO:0000786)
0.0 0.2 GO:0005884 actin filament(GO:0005884)
0.0 0.4 GO:0017119 Golgi transport complex(GO:0017119)
0.0 1.6 GO:0016592 mediator complex(GO:0016592)
0.0 0.1 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.0 0.4 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 0.1 GO:0030874 nucleolar chromatin(GO:0030874)
0.0 1.2 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 0.2 GO:0015030 Cajal body(GO:0015030)
0.0 0.2 GO:0044438 microbody part(GO:0044438) peroxisomal part(GO:0044439)
0.0 0.4 GO:0043230 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 0.4 GO:0005682 U5 snRNP(GO:0005682)
0.0 0.2 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.0 2.9 GO:0016604 nuclear body(GO:0016604)
0.0 0.2 GO:0000791 euchromatin(GO:0000791)
0.0 2.0 GO:0031201 SNARE complex(GO:0031201)
0.0 0.4 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 0.3 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.0 0.2 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 1.6 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.3 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.2 GO:0044815 DNA packaging complex(GO:0044815)
0.0 8.5 GO:0031976 plastid thylakoid(GO:0031976)
0.0 0.1 GO:0005828 kinetochore microtubule(GO:0005828)
0.0 0.3 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.2 GO:0012510 trans-Golgi network transport vesicle membrane(GO:0012510)
0.0 0.2 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.1 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.6 GO:0010319 stromule(GO:0010319)
0.0 0.1 GO:0030870 Mre11 complex(GO:0030870)
0.0 0.1 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.2 GO:0005675 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.0 0.2 GO:0030904 retromer complex(GO:0030904)
0.0 0.4 GO:0072686 mitotic spindle(GO:0072686)
0.0 0.6 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 2.6 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.2 GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.0 0.1 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 0.2 GO:0070531 BRCA1-A complex(GO:0070531)
0.0 0.1 GO:0031902 late endosome membrane(GO:0031902)
0.0 0.1 GO:0000811 GINS complex(GO:0000811)
0.0 0.1 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.6 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 0.2 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.0 0.2 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.0 1.1 GO:0044440 endosomal part(GO:0044440)
0.0 0.2 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.0 0.6 GO:0019898 extrinsic component of membrane(GO:0019898)
0.0 0.4 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.0 0.2 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 0.4 GO:0010287 plastoglobule(GO:0010287)
0.0 0.4 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.1 GO:0030141 secretory granule(GO:0030141)
0.0 0.1 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.2 GO:0030136 clathrin-coated vesicle(GO:0030136)
0.0 1.3 GO:0005681 spliceosomal complex(GO:0005681)
0.0 0.9 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.3 GO:0005770 late endosome(GO:0005770)
0.0 0.1 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.0 0.3 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 0.4 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.4 GO:0044463 cell projection part(GO:0044463)
0.0 0.1 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 0.2 GO:0005769 early endosome(GO:0005769)
0.0 0.2 GO:0031965 nuclear membrane(GO:0031965)
0.0 2.2 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.6 GO:0009524 phragmoplast(GO:0009524)
0.0 0.1 GO:0000124 SAGA complex(GO:0000124)
0.0 0.1 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 6.7 GO:0009532 plastid stroma(GO:0009532)
0.0 0.1 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.1 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.0 0.1 GO:0045275 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 0.1 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.0 0.1 GO:0030119 AP-type membrane coat adaptor complex(GO:0030119)
0.0 0.3 GO:0005881 cytoplasmic microtubule(GO:0005881)
0.0 0.4 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.2 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 47.2 GO:0009536 plastid(GO:0009536)
0.0 0.2 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.3 1.3 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.3 1.0 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.3 1.3 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.3 0.9 GO:0030275 LRR domain binding(GO:0030275)
0.3 1.2 GO:0052595 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.3 0.8 GO:0015087 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.3 1.0 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.2 0.7 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.2 0.9 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.2 0.6 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.2 1.2 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.2 1.6 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.2 3.4 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.2 1.0 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.2 0.6 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.2 0.8 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.2 0.9 GO:1902388 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.2 2.1 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.2 0.6 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.2 0.5 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.2 0.5 GO:0043325 phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.2 0.7 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.2 0.7 GO:0070034 telomerase RNA binding(GO:0070034)
0.2 0.6 GO:1901982 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.2 0.6 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.1 0.6 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 0.4 GO:0004046 aminoacylase activity(GO:0004046)
0.1 0.4 GO:0000386 second spliceosomal transesterification activity(GO:0000386)
0.1 0.4 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.1 0.9 GO:0051002 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.1 0.7 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 4.7 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.9 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.1 1.2 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.1 0.5 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.1 0.4 GO:0015026 coreceptor activity(GO:0015026)
0.1 0.5 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.1 0.5 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.1 0.4 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.1 0.7 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.1 0.6 GO:0001664 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.1 0.4 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.1 1.1 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 0.8 GO:0046030 inositol trisphosphate phosphatase activity(GO:0046030)
0.1 0.5 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.1 1.6 GO:2001070 starch binding(GO:2001070)
0.1 0.8 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.1 0.3 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 0.4 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.1 0.4 GO:0097157 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
0.1 0.3 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.1 0.4 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 1.4 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.1 0.4 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.1 0.4 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.1 1.1 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.3 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.1 0.3 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.1 1.0 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.1 1.6 GO:0001098 basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099)
0.1 0.6 GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity(GO:0004021) alanine-oxo-acid transaminase activity(GO:0047635)
0.1 2.6 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 0.3 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.1 0.5 GO:0008490 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225)
0.1 0.9 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 0.8 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.1 0.5 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.1 0.7 GO:0004738 pyruvate dehydrogenase activity(GO:0004738)
0.1 0.9 GO:0035198 miRNA binding(GO:0035198)
0.1 0.5 GO:0030544 Hsp70 protein binding(GO:0030544)
0.1 0.7 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 0.4 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.1 0.2 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.1 0.3 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.1 0.7 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 0.3 GO:0016979 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.1 0.3 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.1 0.2 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 0.4 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.1 0.1 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.1 0.3 GO:0019779 Atg8 activating enzyme activity(GO:0019779)
0.1 0.8 GO:0015198 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.1 1.5 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.1 0.2 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 0.7 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.1 0.9 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.6 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.1 0.4 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.1 0.3 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.1 0.2 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 0.2 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.1 0.3 GO:0047714 galactolipase activity(GO:0047714)
0.1 0.5 GO:0032977 membrane insertase activity(GO:0032977)
0.1 0.2 GO:0030594 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.1 0.5 GO:0005034 osmosensor activity(GO:0005034)
0.1 0.3 GO:0035197 siRNA binding(GO:0035197)
0.1 0.5 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.1 0.4 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.1 0.2 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.1 0.1 GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity(GO:0051903)
0.1 0.7 GO:0003916 DNA topoisomerase activity(GO:0003916) DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.1 0.9 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 0.1 GO:0030332 cyclin binding(GO:0030332)
0.1 0.2 GO:0004528 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.1 0.4 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.1 0.5 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.8 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 0.4 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.7 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 0.3 GO:0008301 DNA binding, bending(GO:0008301)
0.1 0.3 GO:0045502 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.1 0.3 GO:0030371 translation repressor activity(GO:0030371)
0.1 0.7 GO:0070300 phosphatidic acid binding(GO:0070300)
0.1 0.4 GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.1 0.3 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.3 GO:0004072 aspartate kinase activity(GO:0004072)
0.1 0.3 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.1 0.3 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 0.3 GO:0004325 ferrochelatase activity(GO:0004325)
0.1 0.3 GO:0004127 cytidylate kinase activity(GO:0004127)
0.1 0.2 GO:0050162 oxalate oxidase activity(GO:0050162)
0.1 1.1 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 0.2 GO:0097617 annealing helicase activity(GO:0036310) annealing activity(GO:0097617)
0.1 0.2 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.1 0.4 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.1 0.2 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 0.3 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.1 0.6 GO:0004860 protein kinase inhibitor activity(GO:0004860)
0.1 0.2 GO:0070140 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.1 0.2 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.1 0.5 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.3 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.0 0.1 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.0 0.2 GO:0004335 galactokinase activity(GO:0004335)
0.0 0.2 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.0 0.4 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.0 0.1 GO:0030941 chloroplast targeting sequence binding(GO:0030941)
0.0 0.3 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.0 2.2 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.5 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.2 GO:0004057 arginyltransferase activity(GO:0004057)
0.0 0.1 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.0 0.5 GO:0098847 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.0 0.2 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.0 0.1 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.0 0.2 GO:0003935 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.0 0.4 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.7 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 0.3 GO:0004849 uridine kinase activity(GO:0004849)
0.0 0.1 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.0 0.9 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.0 0.3 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.3 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.0 0.2 GO:0015245 fatty acid transporter activity(GO:0015245)
0.0 0.6 GO:0090599 alpha-glucosidase activity(GO:0090599)
0.0 0.5 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.0 0.1 GO:0009924 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.0 0.7 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.1 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.0 3.7 GO:0000989 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 0.7 GO:0031491 nucleosome binding(GO:0031491)
0.0 2.3 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.5 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.3 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.1 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.0 0.5 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.2 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.0 3.3 GO:0051015 actin filament binding(GO:0051015)
0.0 0.2 GO:0016151 nickel cation binding(GO:0016151)
0.0 0.4 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.1 GO:0016728 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.0 1.6 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.1 GO:0035615 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.2 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.0 0.2 GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity(GO:0003857)
0.0 0.4 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.1 GO:0000035 acyl binding(GO:0000035)
0.0 0.2 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.0 0.2 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.1 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.0 0.2 GO:0017070 U6 snRNA binding(GO:0017070)
0.0 0.2 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.1 GO:0004113 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.0 0.2 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.0 0.2 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.0 0.1 GO:0004348 glucosylceramidase activity(GO:0004348)
0.0 0.2 GO:0019137 thioglucosidase activity(GO:0019137)
0.0 5.0 GO:0043531 ADP binding(GO:0043531)
0.0 0.1 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.0 0.3 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.0 GO:0016815 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.0 0.1 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.0 0.1 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.0 0.2 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.1 GO:0030267 glyoxylate reductase (NADP) activity(GO:0030267)
0.0 0.8 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.1 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.0 0.3 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 1.6 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 1.6 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.2 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.3 GO:0004124 cysteine synthase activity(GO:0004124)
0.0 0.1 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.0 0.6 GO:0060090 binding, bridging(GO:0060090)
0.0 0.4 GO:0008252 nucleotidase activity(GO:0008252)
0.0 0.1 GO:0003856 3-dehydroquinate synthase activity(GO:0003856)
0.0 0.3 GO:0019905 syntaxin binding(GO:0019905)
0.0 0.4 GO:0008417 fucosyltransferase activity(GO:0008417)
0.0 0.3 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.0 0.3 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.2 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.3 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 0.5 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.5 GO:0022884 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.0 1.4 GO:0019843 rRNA binding(GO:0019843)
0.0 0.2 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.0 0.1 GO:0050997 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.0 0.3 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.6 GO:0019200 carbohydrate kinase activity(GO:0019200)
0.0 1.3 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.2 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546) phosphatidylinositol bisphosphate binding(GO:1902936)
0.0 0.1 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.0 0.2 GO:0016248 ion channel inhibitor activity(GO:0008200) channel regulator activity(GO:0016247) channel inhibitor activity(GO:0016248) sodium channel regulator activity(GO:0017080) sodium channel inhibitor activity(GO:0019871)
0.0 0.1 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.0 0.3 GO:0019902 phosphatase binding(GO:0019902)
0.0 0.1 GO:0070678 preprotein binding(GO:0070678)
0.0 1.0 GO:0017137 Rab GTPase binding(GO:0017137)
0.0 0.2 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.0 0.2 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.4 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.0 1.2 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.2 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.0 0.4 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.1 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.0 1.2 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683)
0.0 0.5 GO:0043138 3'-5' DNA helicase activity(GO:0043138)
0.0 0.1 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.0 0.2 GO:0000339 RNA cap binding(GO:0000339)
0.0 0.1 GO:0016768 spermine synthase activity(GO:0016768)
0.0 2.6 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.3 GO:0008066 glutamate receptor activity(GO:0008066)
0.0 1.2 GO:0003727 single-stranded RNA binding(GO:0003727)
0.0 1.0 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.1 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.0 0.1 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.6 GO:0016597 amino acid binding(GO:0016597)
0.0 0.1 GO:0080106 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.0 0.1 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.0 0.4 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.7 GO:0071949 FAD binding(GO:0071949)
0.0 0.2 GO:0016885 CoA carboxylase activity(GO:0016421) ligase activity, forming carbon-carbon bonds(GO:0016885)
0.0 0.1 GO:0047560 3-dehydrosphinganine reductase activity(GO:0047560)
0.0 0.1 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.0 0.8 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.7 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.2 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 0.3 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.1 GO:0017116 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.5 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.0 0.2 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.0 1.5 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.1 GO:0032036 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.0 0.4 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.1 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 0.1 GO:0000149 SNARE binding(GO:0000149)
0.0 0.1 GO:0047780 citrate dehydratase activity(GO:0047780)
0.0 0.0 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.0 0.1 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.0 1.0 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.1 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.0 0.3 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.0 0.5 GO:0016776 phosphotransferase activity, phosphate group as acceptor(GO:0016776)
0.0 1.2 GO:0008017 microtubule binding(GO:0008017)
0.0 0.8 GO:0042393 histone binding(GO:0042393)
0.0 0.1 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 0.1 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.3 GO:0019212 protein phosphatase inhibitor activity(GO:0004864) phosphatase inhibitor activity(GO:0019212)
0.0 0.2 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.1 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.0 0.3 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.1 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.2 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 4.7 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 0.1 GO:0019172 glyoxalase III activity(GO:0019172)
0.0 0.1 GO:0005047 signal recognition particle binding(GO:0005047)
0.0 0.1 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.0 0.1 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.0 0.1 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.0 0.3 GO:0010181 FMN binding(GO:0010181)
0.0 0.0 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.0 0.1 GO:0016676 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.7 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.0 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.0 0.4 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.0 0.1 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.0 0.2 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.0 2.6 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.1 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 1.7 GO:0005516 calmodulin binding(GO:0005516)
0.0 0.0 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.0 0.4 GO:0016279 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.0 0.1 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.1 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.2 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.5 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.2 GO:0030276 clathrin binding(GO:0030276)
0.0 0.2 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.0 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.0 0.1 GO:0010011 auxin binding(GO:0010011)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.4 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.1 0.6 PID S1P META PATHWAY Sphingosine 1-phosphate (S1P) pathway
0.1 0.4 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.1 0.7 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.2 PID ATF2 PATHWAY ATF-2 transcription factor network
0.1 0.3 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.1 0.1 PID SMAD2 3NUCLEAR PATHWAY Regulation of nuclear SMAD2/3 signaling
0.1 0.2 PID LYMPH ANGIOGENESIS PATHWAY VEGFR3 signaling in lymphatic endothelium
0.0 0.1 PID AP1 PATHWAY AP-1 transcription factor network
0.0 0.0 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.0 0.1 PID BARD1 PATHWAY BARD1 signaling events
0.0 0.1 PID E2F PATHWAY E2F transcription factor network
0.0 0.2 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.0 0.1 PID VEGFR1 PATHWAY VEGFR1 specific signals
0.0 0.0 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.2 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.1 0.4 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.1 0.4 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.4 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.1 0.3 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.1 0.3 REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX Genes involved in Signaling by TGF-beta Receptor Complex
0.1 0.3 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.1 0.7 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.1 0.3 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 0.5 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.1 0.2 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.1 0.3 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.1 0.2 REACTOME GLUCOSE METABOLISM Genes involved in Glucose metabolism
0.0 0.4 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.0 0.3 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.0 0.3 REACTOME MEMBRANE TRAFFICKING Genes involved in Membrane Trafficking
0.0 1.0 REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex
0.0 0.4 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.3 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.0 0.1 REACTOME DOWNSTREAM SIGNAL TRANSDUCTION Genes involved in Downstream signal transduction
0.0 0.3 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.0 0.2 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.0 0.3 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.0 0.1 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.0 0.1 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.0 0.1 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.7 REACTOME TRANSMEMBRANE TRANSPORT OF SMALL MOLECULES Genes involved in Transmembrane transport of small molecules
0.0 0.1 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.0 0.1 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions