ISMARA results: AT3G54340_AT5G20240

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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT3G54340_AT5G20240

Z-value: 0.10

Transcription factors associated with AT3G54340_AT5G20240

Gene Symbol	Gene ID	Gene Info
AT3G54340 TAIR	AT3G54340	K-box region and MADS-box transcription factor family protein
AT5G20240 TAIR	AT5G20240	K-box region and MADS-box transcription factor family protein

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
PI	arTal_v1_Chr5_+_6828904_6828987	-0.26	3.6e-01	Click!
AP3	arTal_v1_Chr3_-_20121314_20121314	0.07	8.1e-01	Click!

Activity profile of AT3G54340_AT5G20240 motif

Sorted Z-values of AT3G54340_AT5G20240 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr1_+_26122080_26122080 Show fit	0.10	AT1G69490.1	NAP TAIR Show fit	NAC-like, activated by AP3/PI
arTal_v1_Chr3_+_8242256_8242256 Show fit	0.06	AT3G23130.1	SUP TAIR Show fit	C2H2 and C2HC zinc fingers superfamily protein
arTal_v1_Chr1_-_25986349_25986349 Show fit	0.04	AT1G69120.1 AT1G69120.2	AP1 TAIR Show fit	K-box region and MADS-box transcription factor family protein
arTal_v1_Chr3_-_20121314_20121314 Show fit	0.04	AT3G54340.1	AP3 TAIR Show fit	K-box region and MADS-box transcription factor family protein
arTal_v1_Chr1_-_25984937_25984937 Show fit	0.04	AT1G69120.3	AP1 TAIR Show fit	K-box region and MADS-box transcription factor family protein

Showing 1 to 5 of 5 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G54340_AT5G20240

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Gene Ontology Analysis