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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT3G26790

Z-value: 3.78

Transcription factors associated with AT3G26790

Gene Symbol Gene ID Gene Info
AT3G26790
AT3G26790 AP2/B3-like transcriptional factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
FUS3arTal_v1_Chr3_-_9856212_98562120.478.7e-02Click!

Activity profile of AT3G26790 motif

Sorted Z-values of AT3G26790 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_6130025 6.56 AT1G17810.1
BETA-TIP
beta-tonoplast intrinsic protein
Chr4_+_2449434 6.46 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
Chr3_+_20354351 5.66 AT3G54940.3
AT3G54940.2
AT3G54940
Papain family cysteine protease
Chr5_-_19036938 5.58 AT5G46890.1
AT5G46890
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_19428888 5.47 AT5G47980.1
AT5G47980
HXXXD-type acyl-transferase family protein
Chr5_+_1119937 5.15 AT5G04120.1
AT5G04120
Phosphoglycerate mutase family protein
Chr3_-_7656053 4.84 AT3G21720.1
ICL
isocitrate lyase
Chr1_+_12851983 4.77 AT1G35140.1
PHI-1
Phosphate-responsive 1 family protein
Chr4_-_9754161 4.77 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
Chr1_-_27569823 4.63 AT1G73330.1
DR4
drought-repressed 4
Chr1_-_4835089 4.49 AT1G14120.2
AT1G14120.1
AT1G14120.3
AT1G14120
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_-_983544 4.43 AT1G03870.1
FLA9
FASCICLIN-like arabinoogalactan 9
Chr5_+_1568694 4.31 AT5G05290.1
EXPA2
expansin A2
Chr2_+_12709721 3.77 AT2G29750.1
UGT71C1
UDP-glucosyl transferase 71C1
Chr1_-_16838562 3.77 AT1G44350.1
ILL6
IAA-amino acid hydrolase ILR1-like 6
Chr2_+_19605030 3.74 AT2G47880.1
AT2G47880
Glutaredoxin family protein
Chr2_+_19508929 3.67 AT2G47550.1
AT2G47550
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_-_14002069 3.61 AT4G28250.2
AT4G28250.3
AT4G28250.4
AT4G28250.1
EXPB3
expansin B3
Chr1_+_3288087 3.53 AT1G10070.3
AT1G10070.2
AT1G10070.1
BCAT-2
branched-chain amino acid transaminase 2
Chr3_+_9480746 3.40 AT3G25900.1
AT3G25900.3
AT3G25900.2
HMT-1
Homocysteine S-methyltransferase family protein
Chr2_+_11037303 3.32 AT2G25890.2
AT2G25890.1
AT2G25890
Oleosin family protein
Chr3_-_8290164 3.31 AT3G23230.1
TDR1
Integrase-type DNA-binding superfamily protein
Chr1_-_22589789 3.29 AT1G61255.1
AT1G61255
hypothetical protein
Chr4_+_16598958 3.23 AT4G34810.1
AT4G34810
SAUR-like auxin-responsive protein family
Chr1_+_22628264 3.19 AT1G61340.1
AT1G61340.2
FBS1
F-box family protein
Chr5_+_26266180 3.14 AT5G65690.1
AT5G65690.2
AT5G65690.3
AT5G65690.4
PCK2
phosphoenolpyruvate carboxykinase 2
Chr5_+_1608988 3.12 AT5G05440.1
PYL5
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr1_+_28053030 3.07 AT1G74670.1
GASA6
Gibberellin-regulated family protein
Chr3_-_21293158 3.06 AT3G57520.2
AT3G57520.3
AT3G57520.1
SIP2
seed imbibition 2
Chr3_-_5297851 2.98 AT3G15630.1
AT3G15630
plant/protein
Chr4_+_13275200 2.96 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
Chr1_-_25065446 2.95 AT1G67110.1
AT1G67110.2
CYP735A2
cytochrome P450, family 735, subfamily A, polypeptide 2
Chr1_+_5602786 2.94 AT1G16390.1
OCT3
organic cation/carnitine transporter 3
Chr4_+_13959872 2.92 AT4G28085.1
AT4G28085.2
AT4G28085
transmembrane protein
Chr5_+_448092 2.89 AT5G02230.1
AT5G02230.3
AT5G02230.2
AT5G02230
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_17758275 2.86 AT5G44120.2
AT5G44120.1
AT5G44120.3
CRA1
RmlC-like cupins superfamily protein
Chr1_+_26860110 2.86 AT1G71250.1
AT1G71250
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_+_13297695 2.86 AT4G26260.1
AT4G26260.2
MIOX4
myo-inositol oxygenase 4
Chr2_+_11012499 2.84 AT2G25810.1
TIP4%3B1
tonoplast intrinsic protein 4;1
Chr2_+_13676389 2.81 AT2G32200.2
AT2G32200.1
AT2G32200
cysteine-rich/transmembrane domain A-like protein
Chr3_+_7339640 2.79 AT3G20940.1
CYP705A30
cytochrome P450, family 705, subfamily A, polypeptide 30
Chr4_-_11585391 2.76 AT4G21830.2
MSRB7
methionine sulfoxide reductase B7
Chr4_-_11585542 2.75 AT4G21830.1
MSRB7
methionine sulfoxide reductase B7
Chr3_+_21059785 2.73 AT3G56880.1
AT3G56880
VQ motif-containing protein
Chr2_+_3618058 2.61 AT2G08986.1
AT2G08986
hypothetical protein
Chr5_+_15256243 2.53 AT5G38200.2
AT5G38200.3
AT5G38200.1
AT5G38200
Class I glutamine amidotransferase-like superfamily protein
Chr5_-_20016857 2.49 AT5G49360.1
BXL1
beta-xylosidase 1
Chr1_+_25053673 2.46 AT1G67100.1
LBD40
LOB domain-containing protein 40
Chr5_+_8161928 2.45 AT5G24130.1
AT5G24130
polypyrimidine tract-binding-like protein
Chr5_-_25661007 2.44 AT5G64120.1
AT5G64120
Peroxidase superfamily protein
Chr2_+_7606728 2.40 AT2G17500.2
AT2G17500.1
AT2G17500.3
AT2G17500.4
AT2G17500
Auxin efflux carrier family protein
Chr1_+_27141765 2.40 AT1G72140.1
AT1G72140
Major facilitator superfamily protein
Chr1_-_23013477 2.37 AT1G62290.5
AT1G62290.6
AT1G62290.1
AT1G62290.3
AT1G62290.4
AT1G62290.2
AT1G62290
Saposin-like aspartyl protease family protein
Chr2_-_7182287 2.37 AT2G16570.1
ASE1
GLN phosphoribosyl pyrophosphate amidotransferase 1
Chr1_+_4276505 2.37 AT1G12560.1
EXPA7
expansin A7
Chr2_-_9564850 2.36 AT2G22500.1
UCP5
uncoupling protein 5
Chr1_+_27127170 2.35 AT1G72100.1
AT1G72100
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
Chr2_-_15036556 2.34 AT2G35770.1
scpl28
serine carboxypeptidase-like 28
Chr5_-_22239187 2.34 AT5G54740.1
SESA5
seed storage albumin 5
Chr5_-_11667214 2.30 AT5G31702.1
AT5G31702

Chr3_+_8414616 2.29 AT3G23470.2
AT3G23470.3
AT3G23470.1
AT3G23470
Cyclopropane-fatty-acyl-phospholipid synthase
Chr1_+_26464226 2.28 AT1G70270.2
AT1G70270.1
AT1G70270
transcription factor
Chr5_-_26906517 2.27 AT5G67420.1
AT5G67420.2
LBD37
LOB domain-containing protein 37
Chr5_-_7859201 2.25 AT5G23350.1
AT5G23350
GRAM domain protein/ABA-responsive-like protein
Chr2_-_17268200 2.25 AT2G41420.1
WIH2
proline-rich family protein
Chr1_-_8537780 2.24 AT1G24140.1
AT1G24140
Matrixin family protein
Chr2_+_1676999 2.24 AT2G04780.2
FLA7
FASCICLIN-like arabinoogalactan 7
Chr4_+_13611796 2.24 AT4G27160.1
SESA3
seed storage albumin 3
Chr5_-_3993767 2.24 AT5G12340.2
AT5G12340
DUF4228 domain protein
Chr5_-_17005510 2.22 AT5G42530.1
AT5G42530
hypothetical protein
Chr2_+_19686333 2.22 AT2G48140.1
AT2G48140.2
EDA4
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_6389399 2.22 AT1G18570.1
MYB51
myb domain protein 51
Chr2_+_1676717 2.22 AT2G04780.1
FLA7
FASCICLIN-like arabinoogalactan 7
Chr4_-_10423487 2.21 AT4G19030.3
AT4G19030.1
AT4G19030.2
NLM1
NOD26-like major intrinsic protein 1
Chr1_+_23112933 2.20 AT1G62440.1
LRX2
leucine-rich repeat/extensin 2
Chr2_-_17768379 2.19 AT2G42660.1
AT2G42660
Homeodomain-like superfamily protein
Chr4_+_16708361 2.18 AT4G35100.1
PIP3
plasma membrane intrinsic protein 3
Chr4_+_16708552 2.18 AT4G35100.2
PIP3
plasma membrane intrinsic protein 3
Chr1_+_18121434 2.18 AT1G48990.1
AT1G48990
Oleosin family protein
Chr1_+_7886323 2.15 AT1G22330.1
AT1G22330
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr2_-_19512728 2.13 AT2G47560.1
AT2G47560
RING/U-box superfamily protein
Chr2_-_832619 2.13 AT2G02860.2
AT2G02860.1
SUT2
sucrose transporter 2
Chr4_-_1005253 2.11 AT4G02290.2
AT4G02290.1
GH9B13
glycosyl hydrolase 9B13
Chr4_+_18121526 2.07 AT4G38825.1
AT4G38825
SAUR-like auxin-responsive protein family
Chr1_-_22595338 2.06 AT1G61260.1
AT1G61260
cotton fiber (DUF761)
Chr4_-_18228854 2.06 AT4G39130.1
AT4G39130
Dehydrin family protein
Chr5_-_3993610 2.05 AT5G12340.1
AT5G12340
DUF4228 domain protein
Chr5_+_20820068 2.04 AT5G51210.1
OLEO3
oleosin3
Chr2_+_9488413 2.02 AT2G22330.2
AT2G22330.1
CYP79B3
cytochrome P450, family 79, subfamily B, polypeptide 3
Chr1_-_28823727 2.01 AT1G76790.1
IGMT5
O-methyltransferase family protein
Chr1_+_25957567 2.00 AT1G69040.2
ACR4
ACT domain repeat 4
Chr5_+_23928954 1.98 AT5G59320.1
LTP3
lipid transfer protein 3
Chr3_+_19674533 1.98 AT3G53070.1
AT3G53070
Putative membrane lipoprotein
Chr4_+_13607329 1.97 AT4G27140.1
SESA1
seed storage albumin 1
Chr3_-_16448844 1.97 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
Chr4_+_12900430 1.97 AT4G25140.1
OLEO1
oleosin 1
Chr1_+_25957823 1.96 AT1G69040.1
ACR4
ACT domain repeat 4
Chr3_-_12366047 1.92 AT3G30737.1
AT3G30737

Chr2_+_18236789 1.92 AT2G44080.1
ARL
ARGOS-like protein
Chr1_+_7346156 1.91 AT1G21010.1
AT1G21010
poly polymerase
Chr2_-_9207125 1.91 AT2G21490.1
LEA
dehydrin LEA
Chr5_-_14739256 1.90 AT5G37240.2
AT5G37240.3
AT5G37240.1
AT5G37240
hypothetical protein
Chr1_-_5181374 1.89 AT1G15040.2
AT1G15040.1
GAT1_2.1
Class I glutamine amidotransferase-like superfamily protein
Chr4_-_18084630 1.88 AT4G38740.1
ROC1
rotamase CYP 1
Chr1_-_10378961 1.86 AT1G29680.1
AT1G29680
histone acetyltransferase (DUF1264)
Chr1_-_8983314 1.85 AT1G25560.1
TEM1
AP2/B3 transcription factor family protein
Chr3_-_20523098 1.84 AT3G55360.1
CER10
3-oxo-5-alpha-steroid 4-dehydrogenase family protein
Chr3_-_17902872 1.84 AT3G48344.1
AT3G48344
hypothetical protein
Chr1_-_24183199 1.84 AT1G65090.2
AT1G65090.1
AT1G65090.3
AT1G65090
nucleolin
Chr3_+_1440014 1.83 AT3G05150.1
AT3G05150.2
AT3G05150.3
AT3G05150
Major facilitator superfamily protein
Chr2_-_15186852 1.83 AT2G36210.1
AT2G36210
SAUR-like auxin-responsive protein family
Chr1_+_1136078 1.82 AT1G04250.1
AXR3
AUX/IAA transcriptional regulator family protein
Chr4_-_3950602 1.81 AT4G06700.1
AT4G06700

Chr4_+_12137995 1.79 AT4G23180.1
AT4G23180.3
AT4G23180.2
CRK10
cysteine-rich RLK (RECEPTOR-like protein kinase) 10
Chr5_+_9667311 1.79 AT5G27370.1
AT5G27370
inactive Serine/Threonine-kinase, putative (DUF679)
Chr2_-_5776289 1.78 AT2G13820.2
AT2G13820.1
AT2G13820.3
XYP2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_4337894 1.77 AT5G13500.1
AT5G13500
Hyp O-arabinosyltransferase-like protein
Chr4_-_507626 1.77 AT4G01200.1
AT4G01200
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr3_+_4371441 1.75 AT3G13432.1
AT3G13432
transmembrane protein
Chr4_+_17201922 1.75 AT4G36410.1
UBC17
ubiquitin-conjugating enzyme 17
Chr1_-_4913167 1.72 AT1G14360.1
UTR3
UDP-galactose transporter 3
Chr5_-_18579241 1.71 AT5G45800.2
AT5G45800.1
MEE62
Leucine-rich repeat protein kinase family protein
Chr3_-_19872749 1.69 AT3G53590.1
AT3G53590
LRR receptor-like Serine/Threonine-kinase
Chr2_+_13704068 1.69 AT2G32270.1
ZIP3
zinc transporter 3 precursor
Chr5_+_4338231 1.68 AT5G13500.3
AT5G13500.2
AT5G13500
Hyp O-arabinosyltransferase-like protein
Chr1_-_14172040 1.68 AT1G37140.1
AT1G37140.2
MCT1
MEI2 C-terminal RRM only like 1
Chr1_+_29178705 1.68 AT1G77640.1
AT1G77640
Integrase-type DNA-binding superfamily protein
Chr5_-_7669410 1.67 AT5G22930.1
AT5G22930
enabled-like protein (DUF1635)
Chr3_-_7557969 1.66 AT3G21460.1
AT3G21460
Glutaredoxin family protein
Chr2_+_19469571 1.66 AT2G47440.2
AT2G47440.1
AT2G47440
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_+_1958878 1.63 AT1G06420.1
AT1G06420.2
AT1G06420
DNA ligase-like protein
Chr3_+_10517977 1.62 AT3G28200.1
AT3G28200
Peroxidase superfamily protein
Chr3_-_13049106 1.61 AT3G32040.1
AT3G32040
Terpenoid synthases superfamily protein
Chr1_+_21017311 1.61 AT1G56150.1
AT1G56150
SAUR-like auxin-responsive protein family
Chr1_+_22767617 1.60 AT1G61667.1
AT1G61667
serine protease, putative (Protein of unknown function, DUF538)
Chr4_+_6391854 1.58 AT4G10310.1
HKT1
high-affinity K+ transporter 1
Chr1_+_22767464 1.58 AT1G61667.2
AT1G61667
serine protease, putative (Protein of unknown function, DUF538)
Chr3_+_10831162 1.58 AT3G28830.1
AT3G28830
mucin-like protein, putative (DUF1216)
Chr5_+_20925852 1.58 AT5G51520.1
AT5G51520
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr2_+_14733975 1.58 AT2G34925.1
CLE42
CLAVATA3/ESR-RELATED 42
Chr3_+_21680027 1.58 AT3G58620.1
AT3G58620.2
TTL4
tetratricopetide-repeat thioredoxin-like 4
Chr2_+_14710754 1.57 AT2G34870.1
MEE26
hydroxyproline-rich glycoprotein family protein
Chr4_-_846792 1.57 AT4G01950.1
AT4G01950.2
GPAT3
glycerol-3-phosphate acyltransferase 3
Chr1_+_677360 1.56 AT1G02980.1
CUL2
cullin 2
Chr2_+_17209697 1.56 AT2G41280.1
M10
late embryogenesis abundant protein (M10) / LEA protein M10
Chr3_-_14470707 1.55 AT3G42316.1
AT3G42316

Chr5_+_17927443 1.55 AT5G44500.2
AT5G44500.1
AT5G44500
Small nuclear ribonucleoprotein family protein
Chr3_-_1515566 1.53 AT3G05320.2
AT3G05320.3
AT3G05320
O-fucosyltransferase family protein
Chr5_-_23409452 1.52 AT5G57785.2
AT5G57785
hypothetical protein
Chr4_+_12934562 1.52 AT4G25250.1
AT4G25250
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_677869 1.52 AT1G02980.2
CUL2
cullin 2
Chr5_-_14739490 1.51 AT5G37240.4
AT5G37240.5
AT5G37240
hypothetical protein
Chr1_+_26666383 1.51 AT1G70720.2
AT1G70720.1
AT1G70720
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_+_1332759 1.51 AT5G04640.1
AGL99
AGAMOUS-like 99
Chr5_-_20915879 1.51 AT5G51490.1
AT5G51490
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_+_14052180 1.50 AT4G28410.1
AT4G28410.2
AT4G28410
Tyrosine transaminase family protein
Chr3_+_7940914 1.49 AT3G22415.1
AT3G22415
hypothetical protein
Chr4_+_11352958 1.48 AT4G21340.1
B70
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_-_4018366 1.48 AT4G06718.1
AT4G06718

Chr2_-_16545746 1.47 AT2G39700.1
EXPA4
expansin A4
Chr1_-_6677680 1.47 AT1G19310.1
AT1G19310
RING/U-box superfamily protein
Chr4_+_1569937 1.47 AT4G03540.1
AT4G03540
Uncharacterized protein family (UPF0497)
Chr1_+_6061895 1.46 AT1G17620.1
AT1G17620
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr5_+_4904873 1.46 AT5G15130.2
WRKY72
WRKY DNA-binding protein 72
Chr5_+_11615250 1.46 AT5G30500.2
AT5G30500.1
GolS10
Nucleotide-diphospho-sugar transferases superfamily protein
Chr3_-_12168181 1.46 AT3G30580.1
AT3G30580
hypothetical protein
Chr1_+_26576486 1.46 AT1G70510.2
AT1G70510.1
KNAT2
homeobox knotted-like protein
Chr2_-_10704825 1.46 AT2G25150.1
AT2G25150
HXXXD-type acyl-transferase family protein
Chr4_-_16241169 1.45 AT4G33880.1
RSL2
ROOT HAIR DEFECTIVE 6-LIKE 2
Chr4_+_8931617 1.45 AT4G15680.1
AT4G15680
Thioredoxin superfamily protein
Chr2_-_7893709 1.45 AT2G18150.1
AT2G18150
Peroxidase superfamily protein
Chr1_+_4810115 1.45 AT1G14040.1
AT1G14040
EXS (ERD1/XPR1/SYG1) family protein
Chr1_-_6873358 1.44 AT1G19840.1
AT1G19840
SAUR-like auxin-responsive protein family
Chr2_+_6778191 1.44 AT2G15535.1
LCR10
low-molecular-weight cysteine-rich 10
Chr2_-_14295353 1.44 AT2G33790.1
AGP30
arabinogalactan protein 30
Chr1_+_26182156 1.44 AT1G69600.1
ZFHD1
zinc finger homeodomain 1
Chr3_-_3978600 1.44 AT3G12545.1
AT3G12545
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_4904290 1.44 AT5G15130.1
WRKY72
WRKY DNA-binding protein 72
Chr1_+_28016045 1.43 AT1G74550.1
CYP98A9
cytochrome P450, family 98, subfamily A, polypeptide 9
Chr5_-_11821563 1.43 AT5G32143.1
AT5G32143

Chr2_+_16916330 1.43 AT2G40500.1
AT2G40500
Protein kinase superfamily protein
Chr4_+_17113872 1.43 AT4G36170.1
AT4G36170
hypothetical protein
Chr2_-_3312651 1.42 AT2G07687.1
AT2G07687
Cytochrome c oxidase, subunit III
Chr1_+_3403132 1.42 AT1G10385.1
AT1G10385
Vps51/Vps67 family (components of vesicular transport) protein
Chr3_-_13817171 1.42 AT3G33080.1
AT3G33080

Chr4_-_7386931 1.41 AT4G12450.1
AT4G12450
zinc finger (C2H2 type) family protein
Chr1_-_25662276 1.41 AT1G68450.1
PDE337
VQ motif-containing protein
Chr4_+_11604986 1.39 AT4G21880.1
AT4G21880
Pentatricopeptide repeat (PPR) superfamily protein
Chr4_-_5341209 1.39 AT4G08410.2
AT4G08410.1
AT4G08410
Proline-rich extensin-like family protein
Chr1_+_10897925 1.39 AT1G30720.1
AT1G30720
FAD-binding Berberine family protein
Chr3_-_21216836 1.39 AT3G57330.1
ACA11
autoinhibited Ca2+-ATPase 11
Chr1_-_3831068 1.38 AT1G11370.1
AT1G11370
Pectin lyase-like superfamily protein
Chr5_-_23409715 1.38 AT5G57785.1
AT5G57785
hypothetical protein
Chr4_-_14820595 1.38 AT4G30270.1
XTH24
xyloglucan endotransglucosylase/hydrolase 24
Chr5_-_20036205 1.37 AT5G49420.1
AT5G49420
MADS-box transcription factor family protein
Chr3_-_6575613 1.37 AT3G19040.2
HAF2
histone acetyltransferase of the TAFII250 family 2
Chr2_-_19330197 1.36 AT2G47040.1
VGD1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_-_16583075 1.36 AT4G34760.1
AT4G34760
SAUR-like auxin-responsive protein family
Chr3_-_6575282 1.36 AT3G19040.1
HAF2
histone acetyltransferase of the TAFII250 family 2
Chr1_-_8915219 1.36 AT1G25410.1
IPT6
isopentenyltransferase 6

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G26790

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 5.2 GO:0046416 D-amino acid metabolic process(GO:0046416)
1.2 4.7 GO:0006097 glyoxylate cycle(GO:0006097)
1.1 3.4 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
1.1 3.4 GO:0033530 raffinose metabolic process(GO:0033530)
1.1 4.3 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
1.0 3.9 GO:0048462 carpel formation(GO:0048462)
0.8 2.4 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.8 5.3 GO:0009099 valine biosynthetic process(GO:0009099)
0.8 2.3 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.7 4.2 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.7 4.6 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.6 6.8 GO:0000304 response to singlet oxygen(GO:0000304)
0.6 2.9 GO:0019310 inositol catabolic process(GO:0019310)
0.6 2.2 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.5 1.6 GO:0000032 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
0.5 1.0 GO:0080182 histone H3-K4 trimethylation(GO:0080182)
0.5 2.8 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.4 2.7 GO:1990019 protein storage vacuole organization(GO:1990019)
0.4 1.3 GO:0002215 defense response to nematode(GO:0002215)
0.4 4.6 GO:0052547 negative regulation of peptidase activity(GO:0010466) regulation of peptidase activity(GO:0052547)
0.4 2.0 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.4 1.9 GO:0046622 positive regulation of organ growth(GO:0046622)
0.4 1.8 GO:0010080 regulation of floral meristem growth(GO:0010080)
0.3 4.1 GO:0008216 spermidine metabolic process(GO:0008216)
0.3 4.8 GO:0006949 syncytium formation(GO:0006949)
0.3 1.0 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.3 1.3 GO:0016099 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.3 1.0 GO:0009945 radial axis specification(GO:0009945)
0.3 3.2 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.3 0.9 GO:0002100 tRNA wobble adenosine to inosine editing(GO:0002100)
0.3 2.5 GO:0031222 arabinan catabolic process(GO:0031222)
0.3 6.9 GO:0019915 lipid storage(GO:0019915)
0.3 0.9 GO:0016124 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.3 1.1 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.3 6.8 GO:0030091 protein repair(GO:0030091)
0.3 1.1 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862) negative regulation of seed maturation(GO:2000692)
0.3 1.3 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.3 1.0 GO:0010482 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.3 1.8 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.3 0.8 GO:0048451 petal formation(GO:0048451)
0.3 1.3 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.2 2.0 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.2 5.0 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.2 0.7 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.2 0.9 GO:0042144 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144)
0.2 6.5 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.2 0.7 GO:0010028 xanthophyll cycle(GO:0010028)
0.2 3.6 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.2 1.1 GO:0007266 Rho protein signal transduction(GO:0007266)
0.2 0.9 GO:0010507 negative regulation of autophagy(GO:0010507)
0.2 4.2 GO:0060688 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.2 1.1 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.2 0.2 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.2 1.6 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.2 0.8 GO:2000082 regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.2 3.9 GO:0006521 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238)
0.2 1.2 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.2 0.4 GO:1904062 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.2 1.9 GO:0010264 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.2 2.3 GO:0009554 megasporogenesis(GO:0009554)
0.2 0.7 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.2 1.8 GO:1902025 nitrate import(GO:1902025)
0.2 1.6 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.2 2.2 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.2 0.9 GO:0048655 anther morphogenesis(GO:0048654) anther wall tapetum morphogenesis(GO:0048655)
0.2 3.1 GO:0009750 response to fructose(GO:0009750)
0.2 2.4 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.2 2.3 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.2 0.7 GO:0031023 microtubule organizing center organization(GO:0031023)
0.2 3.3 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.2 0.7 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.2 2.4 GO:0009690 cytokinin metabolic process(GO:0009690)
0.2 0.6 GO:0043447 alkane biosynthetic process(GO:0043447)
0.2 1.1 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.2 1.1 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.2 0.6 GO:0046835 carbohydrate phosphorylation(GO:0046835)
0.2 1.2 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.2 1.7 GO:0048859 formation of organ boundary(GO:0010160) formation of anatomical boundary(GO:0048859)
0.2 12.6 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.1 0.4 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.1 4.0 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.1 2.5 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.1 1.2 GO:0006032 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.1 0.6 GO:0042989 sequestering of actin monomers(GO:0042989)
0.1 2.0 GO:0010315 auxin efflux(GO:0010315)
0.1 0.1 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.8 GO:0009972 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.1 1.2 GO:0048587 regulation of short-day photoperiodism, flowering(GO:0048587)
0.1 2.5 GO:0015770 sucrose transport(GO:0015770)
0.1 0.4 GO:0034247 snoRNA splicing(GO:0034247)
0.1 11.8 GO:0045490 pectin catabolic process(GO:0045490)
0.1 3.5 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.1 0.7 GO:0010455 positive regulation of cell fate commitment(GO:0010455)
0.1 0.9 GO:0051014 actin filament severing(GO:0051014)
0.1 1.5 GO:0080086 stamen filament development(GO:0080086)
0.1 0.4 GO:1990110 callus formation(GO:1990110)
0.1 0.9 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.1 0.7 GO:0009650 UV protection(GO:0009650)
0.1 2.0 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.1 2.3 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 1.5 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.1 0.8 GO:0044211 CTP salvage(GO:0044211)
0.1 1.6 GO:0010161 red light signaling pathway(GO:0010161)
0.1 0.5 GO:0071480 cellular response to gamma radiation(GO:0071480)
0.1 1.8 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.1 1.1 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.1 0.7 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.1 2.0 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.1 0.5 GO:0051318 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.1 0.6 GO:0048579 leading strand elongation(GO:0006272) embryonic root morphogenesis(GO:0010086) negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.1 1.6 GO:0009704 de-etiolation(GO:0009704)
0.1 1.7 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.1 0.5 GO:0010047 fruit dehiscence(GO:0010047)
0.1 1.7 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.1 0.3 GO:0080051 cutin transport(GO:0080051)
0.1 0.4 GO:0045332 phospholipid translocation(GO:0045332)
0.1 1.7 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.1 3.3 GO:0010022 meristem determinacy(GO:0010022)
0.1 3.4 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.1 3.1 GO:0006094 gluconeogenesis(GO:0006094)
0.1 2.4 GO:1900673 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.1 1.1 GO:0009901 anther dehiscence(GO:0009901)
0.1 0.8 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.1 1.6 GO:0009685 gibberellin metabolic process(GO:0009685)
0.1 1.5 GO:0098876 vesicle-mediated transport to the plasma membrane(GO:0098876)
0.1 1.3 GO:0010093 specification of floral organ identity(GO:0010093)
0.1 1.0 GO:0045230 UDP-L-arabinose biosynthetic process(GO:0033358) extracellular polysaccharide biosynthetic process(GO:0045226) capsule polysaccharide biosynthetic process(GO:0045227) capsule organization(GO:0045230) extracellular polysaccharide metabolic process(GO:0046379)
0.1 1.5 GO:0006012 galactose metabolic process(GO:0006012)
0.1 1.4 GO:0010227 floral organ abscission(GO:0010227)
0.1 0.3 GO:0090603 sieve element differentiation(GO:0090603)
0.1 0.3 GO:0043092 L-amino acid import(GO:0043092) L-glutamate import(GO:0051938) L-alpha-amino acid transmembrane transport(GO:1902475)
0.1 1.6 GO:0006814 sodium ion transport(GO:0006814)
0.1 2.1 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.1 1.0 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.1 1.1 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.1 1.2 GO:0015743 malate transport(GO:0015743)
0.1 0.5 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.1 0.7 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 0.7 GO:1902170 cellular response to nitrate(GO:0071249) cellular response to reactive nitrogen species(GO:1902170)
0.1 6.4 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.1 1.1 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 1.8 GO:0010187 negative regulation of seed germination(GO:0010187)
0.1 0.2 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.1 1.4 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 0.8 GO:0009410 response to xenobiotic stimulus(GO:0009410)
0.1 3.9 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.1 1.4 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.1 0.2 GO:2000653 guard cell fate commitment(GO:0010377) regulation of G1/S transition of mitotic cell cycle(GO:2000045) regulation of genetic imprinting(GO:2000653)
0.1 0.5 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.1 0.8 GO:0009880 embryonic pattern specification(GO:0009880)
0.1 2.1 GO:1901800 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.1 0.8 GO:0009299 mRNA transcription(GO:0009299)
0.1 0.5 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.1 3.9 GO:0010431 seed maturation(GO:0010431)
0.1 0.5 GO:0010921 regulation of phosphatase activity(GO:0010921)
0.1 0.8 GO:0048766 root hair initiation(GO:0048766)
0.1 0.4 GO:0048317 seed morphogenesis(GO:0048317)
0.1 0.6 GO:0010833 telomere maintenance via telomere lengthening(GO:0010833)
0.0 0.1 GO:0006651 diacylglycerol biosynthetic process(GO:0006651) diacylglycerol metabolic process(GO:0046339)
0.0 1.3 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.0 0.5 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.7 GO:0001709 cell fate determination(GO:0001709)
0.0 0.1 GO:1903335 regulation of vacuolar transport(GO:1903335) regulation of intracellular mRNA localization(GO:1904580)
0.0 0.8 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.0 0.3 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.4 GO:0036065 fucosylation(GO:0036065)
0.0 0.3 GO:0072337 modified amino acid transport(GO:0072337)
0.0 0.3 GO:0032890 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.0 0.5 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.5 GO:0046654 tetrahydrofolate biosynthetic process(GO:0046654)
0.0 0.9 GO:0050826 response to freezing(GO:0050826)
0.0 1.3 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.5 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.0 0.8 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.0 0.3 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 3.2 GO:0006869 lipid transport(GO:0006869)
0.0 1.0 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.3 GO:0000338 protein deneddylation(GO:0000338)
0.0 1.4 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.3 GO:0031048 chromatin silencing by small RNA(GO:0031048)
0.0 0.1 GO:0015739 sialic acid transport(GO:0015739)
0.0 1.2 GO:0009846 pollen germination(GO:0009846)
0.0 0.4 GO:0046149 chlorophyll catabolic process(GO:0015996) pigment catabolic process(GO:0046149)
0.0 0.2 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.0 0.1 GO:0080187 floral organ senescence(GO:0080187)
0.0 0.9 GO:0098732 macromolecule deacylation(GO:0098732)
0.0 1.5 GO:0006885 regulation of pH(GO:0006885)
0.0 2.0 GO:0009723 response to ethylene(GO:0009723)
0.0 0.8 GO:0000160 phosphorelay signal transduction system(GO:0000160)
0.0 0.4 GO:0000038 very long-chain fatty acid metabolic process(GO:0000038)
0.0 0.5 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.8 GO:0002239 response to oomycetes(GO:0002239)
0.0 0.2 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 1.4 GO:0019722 calcium-mediated signaling(GO:0019722)
0.0 0.3 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 0.1 GO:0046786 viral replication complex formation and maintenance(GO:0046786)
0.0 0.4 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.3 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.7 GO:0042542 response to hydrogen peroxide(GO:0042542)
0.0 0.0 GO:0009660 amyloplast organization(GO:0009660)
0.0 0.5 GO:0043622 cortical microtubule organization(GO:0043622)
0.0 0.0 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.0 0.6 GO:0035670 plant-type ovary development(GO:0035670) plant ovule development(GO:0048481)
0.0 0.2 GO:0042330 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.7 5.0 GO:0009514 glyoxysome(GO:0009514)
0.6 14.9 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.4 1.3 GO:0016323 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.3 0.9 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.3 0.9 GO:0009501 amyloplast(GO:0009501)
0.3 1.6 GO:0005687 U4 snRNP(GO:0005687)
0.2 0.7 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.2 2.1 GO:0030139 endocytic vesicle(GO:0030139)
0.2 7.9 GO:0005764 lysosome(GO:0005764)
0.2 0.7 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.2 1.8 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.2 1.3 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.2 0.6 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.2 1.1 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.2 0.6 GO:0000782 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.1 0.9 GO:0031931 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.1 21.0 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 2.3 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 0.9 GO:0005884 actin filament(GO:0005884)
0.1 1.4 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.1 3.0 GO:0005811 lipid particle(GO:0005811)
0.1 0.9 GO:0016324 apical plasma membrane(GO:0016324)
0.1 1.7 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.1 0.2 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.1 0.3 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.1 1.0 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.1 4.3 GO:0090406 pollen tube(GO:0090406)
0.1 12.3 GO:0009505 plant-type cell wall(GO:0009505)
0.1 7.4 GO:0031225 anchored component of membrane(GO:0031225)
0.1 1.1 GO:1902495 transmembrane transporter complex(GO:1902495)
0.1 6.4 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.1 0.7 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.1 3.6 GO:0005615 extracellular space(GO:0005615)
0.1 1.1 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 1.1 GO:0000145 exocyst(GO:0000145)
0.0 2.9 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.5 GO:0008180 COP9 signalosome(GO:0008180)
0.0 2.4 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.0 0.3 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 0.4 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 1.2 GO:0099568 cell cortex(GO:0005938) cytoplasmic region(GO:0099568)
0.0 51.8 GO:0005576 extracellular region(GO:0005576)
0.0 0.7 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 3.7 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.0 0.4 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.0 2.1 GO:0005681 spliceosomal complex(GO:0005681)
0.0 0.1 GO:0031902 late endosome membrane(GO:0031902)
0.0 0.1 GO:0009986 cell surface(GO:0009986)
0.0 0.3 GO:0005871 kinesin complex(GO:0005871)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 5.2 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
1.3 3.8 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
1.1 3.4 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
1.1 12.3 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
1.0 3.1 GO:0052692 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.8 2.4 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.8 2.4 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.7 4.0 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.6 12.5 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.6 1.8 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.6 2.9 GO:0050113 inositol oxygenase activity(GO:0050113)
0.5 1.6 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.5 3.8 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.5 2.8 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.4 3.1 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.4 1.3 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.4 1.3 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.4 1.1 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.4 2.8 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.3 1.3 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.3 3.8 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.3 0.9 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.3 1.3 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.3 3.8 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.3 0.9 GO:0036310 annealing helicase activity(GO:0036310)
0.3 1.3 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.3 2.3 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.3 2.8 GO:0033613 activating transcription factor binding(GO:0033613)
0.2 2.0 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.2 3.0 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.2 1.2 GO:0004129 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.2 1.7 GO:0019158 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.2 5.2 GO:0030414 peptidase inhibitor activity(GO:0030414)
0.2 0.6 GO:0071771 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.2 0.6 GO:0047912 galacturonokinase activity(GO:0047912)
0.2 0.8 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
0.2 1.6 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.2 2.5 GO:0046556 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.2 1.3 GO:0050551 myrcene synthase activity(GO:0050551)
0.2 0.9 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.2 4.1 GO:0010333 terpene synthase activity(GO:0010333)
0.2 4.6 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.2 1.6 GO:0008083 growth factor activity(GO:0008083)
0.2 0.5 GO:0008909 isochorismate synthase activity(GO:0008909)
0.2 3.6 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.2 1.4 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.2 11.9 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.2 1.2 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.2 1.7 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.2 1.5 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.2 0.5 GO:0004156 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.2 0.6 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.2 1.1 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.2 6.7 GO:0045735 nutrient reservoir activity(GO:0045735)
0.2 1.3 GO:0042299 lupeol synthase activity(GO:0042299)
0.2 0.5 GO:0016418 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.2 0.6 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.2 0.5 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.2 4.0 GO:0015925 beta-galactosidase activity(GO:0004565) galactosidase activity(GO:0015925)
0.2 0.3 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
0.1 2.3 GO:0017025 TBP-class protein binding(GO:0017025)
0.1 2.0 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 0.8 GO:0004126 cytidine deaminase activity(GO:0004126)
0.1 0.6 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 2.5 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.1 2.0 GO:0004499 N,N-dimethylaniline monooxygenase activity(GO:0004499)
0.1 0.5 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.1 1.7 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.1 0.9 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.1 0.6 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 3.5 GO:0008810 cellulase activity(GO:0008810)
0.1 2.3 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 0.8 GO:0004849 uridine kinase activity(GO:0004849)
0.1 0.6 GO:0003785 actin monomer binding(GO:0003785)
0.1 2.2 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.9 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.1 0.9 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.1 0.7 GO:0051183 vitamin transporter activity(GO:0051183)
0.1 2.9 GO:0005179 hormone activity(GO:0005179)
0.1 3.6 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.1 2.2 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.1 2.2 GO:0043424 protein histidine kinase binding(GO:0043424)
0.1 1.1 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.1 1.2 GO:0008061 chitin binding(GO:0008061)
0.1 4.4 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 1.0 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.1 1.9 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.8 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.1 0.9 GO:0030674 protein binding, bridging(GO:0030674)
0.1 4.7 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.1 1.6 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 5.2 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.1 1.0 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 1.0 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 3.3 GO:0015081 sodium ion transmembrane transporter activity(GO:0015081)
0.1 0.3 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 1.3 GO:0030599 pectinesterase activity(GO:0030599)
0.1 0.6 GO:0017136 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 0.7 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 0.5 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.1 3.0 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.1 0.5 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.5 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.0 0.1 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.0 0.3 GO:0016004 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.0 1.0 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.0 3.1 GO:0016410 N-acyltransferase activity(GO:0016410)
0.0 0.6 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.7 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.0 2.2 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 1.6 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.4 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.3 GO:0051185 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 2.8 GO:1901476 carbohydrate transporter activity(GO:1901476)
0.0 0.1 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.0 0.1 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.0 0.2 GO:0015369 calcium:cation antiporter activity(GO:0015368) calcium:proton antiporter activity(GO:0015369)
0.0 0.3 GO:0008169 C-methyltransferase activity(GO:0008169)
0.0 0.3 GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism(GO:0044769) proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.0 0.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.0 0.2 GO:0019137 thioglucosidase activity(GO:0019137)
0.0 0.8 GO:0016168 chlorophyll binding(GO:0016168)
0.0 2.8 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.3 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.7 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.6 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.3 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.9 GO:0016790 thiolester hydrolase activity(GO:0016790)
0.0 0.5 GO:0031386 protein tag(GO:0031386)
0.0 1.1 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.0 0.8 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.6 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.0 0.2 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.0 1.1 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.4 GO:0097602 cullin family protein binding(GO:0097602)
0.0 5.0 GO:0005506 iron ion binding(GO:0005506)
0.0 1.1 GO:0016836 hydro-lyase activity(GO:0016836)
0.0 0.6 GO:0005096 GTPase activator activity(GO:0005096)
0.0 0.6 GO:0019901 protein kinase binding(GO:0019901)
0.0 0.5 GO:0008483 transaminase activity(GO:0008483)
0.0 0.9 GO:0005543 phospholipid binding(GO:0005543)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.1 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.7 1.3 NABA SECRETED FACTORS Genes encoding secreted soluble factors
0.4 1.9 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.2 0.6 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.2 1.6 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.2 0.6 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.1 0.9 PID NOTCH PATHWAY Notch signaling pathway
0.1 0.7 PID E2F PATHWAY E2F transcription factor network
0.0 0.1 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.0 0.1 PID CMYB PATHWAY C-MYB transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 3.1 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
1.0 4.1 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.2 0.6 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.2 1.3 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.2 1.1 REACTOME BIOLOGICAL OXIDATIONS Genes involved in Biological oxidations
0.1 1.2 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.7 REACTOME G1 PHASE Genes involved in G1 Phase
0.1 0.7 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives