Project

GSE130291:vernalization in Arabidopsis thaliana

Navigation
Downloads

Results for AT3G24050

Z-value: 1.53

Transcription factors associated with AT3G24050

Gene Symbol Gene ID Gene Info
AT3G24050
AT3G24050 GATA transcription factor 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
GATA1arTal_v1_Chr3_+_8685739_8685739-0.253.9e-01Click!

Activity profile of AT3G24050 motif

Sorted Z-values of AT3G24050 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_20458952 2.86 AT1G54870.2
AT1G54870.1
AT1G54870
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_2747936 2.53 AT1G08630.6
AT1G08630.7
AT1G08630.5
AT1G08630.2
THA1
threonine aldolase 1
Chr5_+_9200271 2.18 AT5G26260.1
AT5G26260
TRAF-like family protein
Chr3_-_8064649 1.85 AT3G22800.1
AT3G22800
Leucine-rich repeat (LRR) family protein
Chr1_-_28549586 1.85 AT1G76080.1
CDSP32
chloroplastic drought-induced stress protein of 32 kD
Chr1_-_27265806 1.72 AT1G72430.1
AT1G72430
SAUR-like auxin-responsive protein family
Chr1_-_2746526 1.65 AT1G08630.4
THA1
threonine aldolase 1
Chr1_-_2746740 1.63 AT1G08630.3
THA1
threonine aldolase 1
Chr1_-_2747243 1.61 AT1G08630.1
THA1
threonine aldolase 1
Chr2_-_108803 1.52 AT2G01180.7
AT2G01180.2
AT2G01180.5
AT2G01180.1
AT2G01180.8
AT2G01180.4
AT2G01180.3
PAP1
phosphatidic acid phosphatase 1
Chr2_+_3618058 1.42 AT2G08986.1
AT2G08986
hypothetical protein
Chr5_-_13903218 1.42 AT5G35735.1
AT5G35735
Auxin-responsive family protein
Chr5_-_753657 1.40 AT5G03170.1
FLA11
FASCICLIN-like arabinogalactan-protein 11
Chr1_+_6389399 1.33 AT1G18570.1
MYB51
myb domain protein 51
Chr3_-_10590685 1.30 AT3G28340.1
GATL10
galacturonosyltransferase-like 10
Chr4_+_14368877 1.29 AT4G29140.1
ADS1
MATE efflux family protein
Chr3_+_8414616 1.23 AT3G23470.2
AT3G23470.3
AT3G23470.1
AT3G23470
Cyclopropane-fatty-acyl-phospholipid synthase
Chr5_-_19447149 1.22 AT5G48000.7
AT5G48000.4
AT5G48000.2
AT5G48000.3
AT5G48000.5
AT5G48000.6
CYP708A2
cytochrome P450, family 708, subfamily A, polypeptide 2
Chr1_-_19385533 1.18 AT1G52100.1
AT1G52100.3
AT1G52100.4
AT1G52100.2
AT1G52100.5
AT1G52100
Mannose-binding lectin superfamily protein
Chr2_-_108231 1.18 AT2G01180.6
PAP1
phosphatidic acid phosphatase 1
Chr1_-_10720843 1.17 AT1G30370.1
DLAH
alpha/beta-Hydrolases superfamily protein
Chr2_-_13042586 1.17 AT2G30615.1
AT2G30615
F-box/LRR protein
Chr5_+_4541780 1.13 AT5G14070.1
ROXY2
Thioredoxin superfamily protein
Chr2_+_9737583 1.11 AT2G22860.1
PSK2
phytosulfokine 2 precursor
Chr3_-_17902872 1.10 AT3G48344.1
AT3G48344
hypothetical protein
Chr1_+_20462940 1.10 AT1G54890.1
AT1G54890
Late embryogenesis abundant (LEA) protein-like protein
Chr5_+_19338511 1.09 AT5G47740.1
AT5G47740.2
AT5G47740
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr1_-_10014256 1.08 AT1G28480.1
GRX480
Thioredoxin superfamily protein
Chr1_+_3031046 1.07 AT1G09390.1
AT1G09390
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_-_7250770 1.03 AT5G21940.1
AT5G21940
hybrid signal transduction histidine kinase M-like protein
Chr2_+_1568279 1.02 AT2G04500.1
AT2G04500
Cysteine/Histidine-rich C1 domain family protein
Chr1_-_7105869 1.00 AT1G20510.2
AT1G20510.3
AT1G20510.1
OPCL1
OPC-8:0 CoA ligase1
Chr1_+_9191503 1.00 AT1G26600.2
AT1G26600.1
CLE9
CLAVATA3/ESR-RELATED 9
Chr1_-_22447299 0.99 AT1G60960.2
AT1G60960.1
IRT3
iron regulated transporter 3
Chr1_-_8310916 0.97 AT1G23390.1
AT1G23390
Kelch repeat-containing F-box family protein
Chr1_-_22446902 0.97 AT1G60960.3
IRT3
iron regulated transporter 3
Chr2_+_15847450 0.97 AT2G37820.1
AT2G37820
Cysteine/Histidine-rich C1 domain family protein
Chr2_-_17992047 0.97 AT2G43290.1
MSS3
Calcium-binding EF-hand family protein
Chr5_-_7643098 0.97 AT5G22860.4
AT5G22860.3
AT5G22860.1
AT5G22860.6
AT5G22860.7
AT5G22860.8
AT5G22860.2
AT5G22860.5
AT5G22860
Serine carboxypeptidase S28 family protein
Chr4_-_10423487 0.96 AT4G19030.3
AT4G19030.1
AT4G19030.2
NLM1
NOD26-like major intrinsic protein 1
Chr4_-_3950602 0.94 AT4G06700.1
AT4G06700

Chr3_-_8013941 0.94 AT3G22640.1
PAP85
cupin family protein
Chr2_+_3067148 0.92 AT2G07390.1
AT2G07390

Chr5_-_19447866 0.91 AT5G48000.1
CYP708A2
cytochrome P450, family 708, subfamily A, polypeptide 2
Chr5_+_26430071 0.90 AT5G66110.2
AT5G66110.1
AT5G66110.3
HIPP27
Heavy metal transport/detoxification superfamily protein
Chr1_-_27276562 0.89 AT1G72450.1
JAZ6
jasmonate-zim-domain protein 6
Chr3_-_321663 0.89 AT3G01930.1
AT3G01930.3
AT3G01930.2
AT3G01930
Major facilitator superfamily protein
Chr1_-_27276317 0.89 AT1G72450.2
JAZ6
jasmonate-zim-domain protein 6
Chr5_+_25322975 0.89 AT5G63130.2
AT5G63130.1
AT5G63130
Octicosapeptide/Phox/Bem1p family protein
Chr3_+_12104312 0.88 AT3G30460.2
AT3G30460.1
AT3G30460
RING/U-box superfamily protein
Chr3_-_19897955 0.88 AT3G53680.1
AT3G53680
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Chr3_+_3698658 0.86 AT3G11700.1
FLA18
FASCICLIN-like arabinogalactan protein 18 precursor
Chr2_+_875233 0.86 AT2G03000.1
AT2G03000
RING/U-box superfamily protein
Chr2_-_11968712 0.86 AT2G28085.1
AT2G28085
SAUR-like auxin-responsive protein family
Chr3_-_19897412 0.85 AT3G53680.2
AT3G53680
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Chr2_+_6880825 0.84 AT2G15800.1
AT2G15800

Chr5_-_2908658 0.84 AT5G09360.1
LAC14
laccase 14
Chr1_+_1882907 0.84 AT1G06160.1
ORA59
octadecanoid-responsive AP2/ERF 59
Chr1_+_25391338 0.84 AT1G67730.1
KCR1
beta-ketoacyl reductase 1
Chr1_-_7804038 0.83 AT1G22110.2
AT1G22110.1
AT1G22110
structural constituent of ribosome
Chr2_-_16725774 0.83 AT2G40050.2
AT2G40050.1
AT2G40050
Cysteine/Histidine-rich C1 domain family protein
Chr5_-_23890431 0.82 AT5G59200.1
OTP80
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_3018342 0.80 AT5G09730.1
BXL3
beta-xylosidase 3
Chr5_+_10129022 0.78 AT5G28145.1
AT5G28145

Chr5_+_26767599 0.77 AT5G67070.1
RALFL34
ralf-like 34
Chr3_-_4227528 0.77 AT3G13140.1
AT3G13140
hydroxyproline-rich glycoprotein family protein
Chr1_-_7802566 0.77 AT1G22110.3
AT1G22110
structural constituent of ribosome
Chr1_-_20703460 0.77 AT1G55440.1
AT1G55440
Cysteine/Histidine-rich C1 domain family protein
Chr1_+_26157702 0.75 AT1G69560.2
AT1G69560.1
MYB105
myb domain protein 105
Chr4_-_53449 0.74 AT4G00140.1
EDA34
Calcium-binding EF-hand family protein
Chr1_+_21540584 0.74 AT1G58190.1
AT1G58190.2
RLP9
receptor like protein 9
Chr1_-_12313518 0.74 AT1G33900.1
AT1G33900
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_-_7594195 0.73 AT2G17480.1
MLO8
Seven transmembrane MLO family protein
Chr3_-_2781237 0.72 AT3G09080.2
AT3G09080
Transducin/WD40 repeat-like superfamily protein
Chr5_+_15522650 0.72 AT5G38750.1
AT5G38750
asparaginyl-tRNA synthetase family
Chr3_-_19643276 0.71 AT3G52970.1
AT3G52970.2
CYP76G1
cytochrome P450, family 76, subfamily G, polypeptide 1
Chr4_+_11644122 0.71 AT4G21950.1
AT4G21950
hypothetical protein
Chr5_+_7401707 0.71 AT5G22355.1
AT5G22355
Cysteine/Histidine-rich C1 domain family protein
Chr1_-_11015913 0.70 AT1G30930.1
AT1G30930
F-box family protein
Chr2_+_18374162 0.69 AT2G44500.1
AT2G44500.2
AT2G44500
O-fucosyltransferase family protein
Chr1_+_13000586 0.69 AT1G35370.1
AT1G35370

Chr5_-_22921139 0.68 AT5G56620.1
NAC099
NAC domain containing protein 99
Chr2_-_17546559 0.68 AT2G42050.1
AT2G42050

Chr1_-_2282828 0.68 AT1G07430.1
HAI2
highly ABA-induced PP2C protein 2
Chr2_-_3165509 0.68 AT2G07550.1
AT2G07550

Chr3_-_809158 0.67 AT3G03400.1
AT3G03400
EF hand calcium-binding protein family
Chr2_-_3312651 0.67 AT2G07687.1
AT2G07687
Cytochrome c oxidase, subunit III
Chr5_-_13740702 0.67 AT5G35555.1
AT5G35555

Chr3_-_22811024 0.66 AT3G61640.1
AGP20
arabinogalactan protein 20
Chr2_-_10346829 0.66 AT2G24320.1
AT2G24320
alpha/beta-Hydrolases superfamily protein
Chr1_-_20683143 0.66 AT1G55390.1
AT1G55390
Cysteine/Histidine-rich C1 domain family protein
Chr5_+_17053453 0.66 AT5G42600.1
MRN1
marneral synthase
Chr4_-_10955584 0.65 AT4G20290.1
AT4G20290
transmembrane protein
Chr1_+_11811040 0.65 AT1G32660.1
AT1G32660
F-box and associated interaction domains-containing protein
Chr4_+_11352958 0.65 AT4G21340.1
B70
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_-_2193416 0.64 AT5G07050.1
UMAMIT9
nodulin MtN21 /EamA-like transporter family protein
Chr5_-_23896702 0.64 AT5G59220.2
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
Chr5_+_4658441 0.64 AT5G14450.1
AT5G14450
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_14009287 0.64 AT4G28270.1
RMA2
RING membrane-anchor 2
Chr4_+_16118830 0.63 AT4G33520.2
AT4G33520.1
AT4G33520.3
AT4G33520.4
PAA1
P-type ATP-ase 1
Chr5_-_23896939 0.63 AT5G59220.1
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
Chr5_+_16227771 0.63 AT5G40500.2
AT5G40500.1
AT5G40500
hypothetical protein
Chr3_-_19453212 0.63 AT3G52480.1
AT3G52480
transmembrane protein
Chr4_-_11612903 0.62 AT4G21890.1
AT4G21890
zinc finger MYND domain protein
Chr5_+_16121708 0.62 AT5G40320.1
AT5G40320
Cysteine/Histidine-rich C1 domain family protein
Chr5_+_24799836 0.62 AT5G61710.1
AT5G61710
cotton fiber protein
Chr2_+_14507294 0.62 AT2G34360.2
AT2G34360.1
AT2G34360
MATE efflux family protein
Chr3_-_15679850 0.62 AT3G43830.1
AT3G43830

Chr1_+_22847247 0.62 AT1G61840.1
AT1G61840
Cysteine/Histidine-rich C1 domain family protein
Chr3_-_2781785 0.61 AT3G09080.1
AT3G09080.4
AT3G09080.3
AT3G09080
Transducin/WD40 repeat-like superfamily protein
Chr2_+_3144615 0.61 AT2G07530.1
AT2G07530

Chr4_-_7746394 0.60 AT4G13300.1
TPS13
terpenoid synthase 13
Chr2_+_972917 0.60 AT2G03230.1
AT2G03230
GCK domain-containing protein
Chr1_-_18992149 0.60 AT1G51220.1
WIP5
WIP domain protein 5
Chr5_+_26818949 0.60 AT5G67210.1
IRX15-L
IRREGULAR XYLEM protein (DUF579)
Chr2_+_18718348 0.60 AT2G45420.1
LBD18
LOB domain-containing protein 18
Chr5_-_21903854 0.59 AT5G53950.1
CUC2
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr1_+_564018 0.59 AT1G02640.1
BXL2
beta-xylosidase 2
Chr2_+_18958999 0.59 AT2G46140.1
AT2G46140
Late embryogenesis abundant protein
Chr3_-_8619285 0.59 AT3G23860.3
AT3G23860
GTP-binding protein-like protein
Chr5_+_3052062 0.59 AT5G09810.1
ACT7
actin 7
Chr4_-_8563667 0.59 AT4G14980.1
AT4G14980
Cysteine/Histidine-rich C1 domain family protein
Chr5_+_14694503 0.58 AT5G37145.1
AT5G37145

Chr3_-_8617645 0.58 AT3G23860.1
AT3G23860.2
AT3G23860
GTP-binding protein-like protein
Chr1_-_6908805 0.58 AT1G19900.1
AT1G19900
glyoxal oxidase-related protein
Chr5_-_7445573 0.58 AT5G22460.3
AT5G22460.1
AT5G22460
alpha/beta-Hydrolases superfamily protein
Chr5_-_7445400 0.57 AT5G22460.2
AT5G22460
alpha/beta-Hydrolases superfamily protein
Chr5_-_8129402 0.57 AT5G24050.1
AT5G24050
plant-specific B3-DNA-binding domain protein (DUF313)
Chr5_-_23469856 0.57 AT5G57980.1
RPB5C
RNA polymerase II fifth largest subunit, C
Chr5_-_5259924 0.57 AT5G16100.2
AT5G16100
RWP-RK domain protein
Chr1_+_8918789 0.57 AT1G25422.1
AT1G25422
hypothetical protein
Chr1_-_2551544 0.56 AT1G08135.1
CHX6B
cation/H+ exchanger 6B
Chr5_-_2378824 0.56 AT5G07510.2
AT5G07510.1
AT5G07510.3
GRP14
glycine-rich protein 14
Chr3_-_4799612 0.56 AT3G14370.1
WAG2
Protein kinase superfamily protein
Chr4_-_1244822 0.56 AT4G02780.1
GA1
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Chr2_-_10347053 0.56 AT2G24320.2
AT2G24320
alpha/beta-Hydrolases superfamily protein
Chr4_-_8850516 0.55 AT4G15480.1
UGT84A1
UDP-Glycosyltransferase superfamily protein
Chr5_+_1624563 0.55 AT5G05490.2
SYN1
Rad21/Rec8-like family protein
Chr1_-_5652883 0.55 AT1G16530.1
ASL9
ASYMMETRIC LEAVES 2-like 9
Chr5_+_1624206 0.55 AT5G05490.1
SYN1
Rad21/Rec8-like family protein
Chr1_-_9757963 0.55 AT1G28000.1
AT1G28000
Pentatricopeptide repeat (PPR) superfamily protein
Chr5_-_22189746 0.55 AT5G54620.1
AT5G54620
Ankyrin repeat family protein
Chr2_-_2743438 0.55 AT2G06830.1
AT2G06830

Chr1_-_13680593 0.55 AT1G36330.1
AT1G36330

Chr2_-_14031069 0.55 AT2G33070.2
AT2G33070.1
AT2G33070.3
NSP2
nitrile specifier protein 2
Chr5_-_10646093 0.55 AT5G28637.1
AT5G28637

Chr3_+_8586359 0.54 AT3G23805.1
RALFL24
ralf-like 24
Chr5_+_25050152 0.54 AT5G62380.1
NAC101
NAC-domain protein 101
Chr2_+_17560211 0.54 AT2G42100.1
AT2G42100
Actin-like ATPase superfamily protein
Chr1_-_7029698 0.54 AT1G20290.1
AT1G20290
SWI-SNF-related chromatin binding protein
Chr5_-_2108020 0.54 AT5G06805.1
AT5G06805

Chr1_-_10789943 0.53 AT1G30475.1
AT1G30475
hypothetical protein
Chr1_+_15640156 0.53 AT1G41860.1
AT1G41860

Chr5_-_22513588 0.53 AT5G55565.1
AT5G55565
defensin-like protein
Chr5_-_22921499 0.53 AT5G56620.3
AT5G56620.2
NAC099
NAC domain containing protein 99
Chr5_-_5259719 0.53 AT5G16100.1
AT5G16100
RWP-RK domain protein
Chr2_+_5857536 0.53 AT2G13950.1
AT2G13950
Cysteine/Histidine-rich C1 domain family protein
Chr2_-_16568822 0.53 AT2G39720.1
AT2G39720.2
RHC2A
RING-H2 finger C2A
Chr5_+_26355873 0.52 AT5G65890.4
ACR1
ACT domain repeat 1
Chr1_-_16509784 0.52 AT1G43730.1
AT1G43730
RNA-directed DNA polymerase (reverse transcriptase)-related family protein
Chr1_+_11277417 0.52 AT1G31510.1
AT1G31510
F-box associated ubiquitination effector family protein
Chr5_+_2616134 0.52 AT5G08139.1
AT5G08139
RING/U-box superfamily protein
Chr1_+_27354603 0.52 AT1G72660.4
AT1G72660
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_-_22109379 0.52 AT5G54450.1
AT5G54450
hypothetical protein (DUF295)
Chr3_-_3585850 0.52 AT3G11410.1
PP2CA
protein phosphatase 2CA
Chr5_+_11713113 0.52 AT5G31787.1
AT5G31787

Chr3_+_22464623 0.52 AT3G60790.1
AT3G60790
F-box family protein
Chr3_-_4250703 0.52 AT3G13220.1
ABCG26
ABC-2 type transporter family protein
Chr1_+_8885210 0.51 AT1G25340.2
AT1G25340.3
MYB116
myb domain protein 116
Chr1_-_27031461 0.51 AT1G71866.1
AT1G71866.2
AT1G71866
EPIDERMAL PATTERNING FACTOR-like protein
Chr3_-_13428501 0.51 AT3G32902.1
AT3G32902

Chr4_-_9008167 0.51 AT4G15860.1
AT4G15860

Chr5_-_22186633 0.51 AT5G54610.1
ANK
ankyrin
Chr5_-_8284001 0.51 AT5G24318.2
AT5G24318.4
AT5G24318.3
AT5G24318.1
AT5G24318
O-Glycosyl hydrolases family 17 protein
Chr3_+_15262136 0.51 AT3G43307.1
AT3G43307

Chr3_-_23359148 0.51 AT3G63220.2
AT3G63220.3
AT3G63220.1
AT3G63220
Galactose oxidase/kelch repeat superfamily protein
Chr4_-_5312406 0.51 AT4G08380.1
AT4G08380
Proline-rich extensin-like family protein
Chr5_+_26354853 0.51 AT5G65890.2
AT5G65890.3
AT5G65890.1
ACR1
ACT domain repeat 1
Chr5_-_6438242 0.51 AT5G19165.1
AT5G19165

Chr1_+_17520860 0.51 AT1G47650.1
AT1G47650

Chr1_-_13144988 0.51 AT1G35610.1
AT1G35610
Cysteine/Histidine-rich C1 domain family protein
Chr1_-_17798337 0.51 AT1G48200.1
AT1G48200
hypothetical protein
Chr3_-_14377539 0.51 AT3G42203.1
AT3G42203

Chr4_-_13554436 0.50 AT4G26990.1
AT4G26990
polyadenylate-binding protein interacting protein
Chr2_-_3036387 0.50 AT2G07310.1
AT2G07310
hypothetical protein
Chr2_+_16997078 0.50 AT2G40740.3
AT2G40740.2
AT2G40740.1
WRKY55
WRKY DNA-binding protein 55
Chr1_+_29446861 0.50 AT1G78260.1
AT1G78260.2
AT1G78260
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr5_+_2616287 0.50 AT5G08139.2
AT5G08139
RING/U-box superfamily protein
Chr5_-_10733393 0.50 AT5G28692.1
AT5G28692

Chr3_+_14876476 0.50 AT3G42786.1
AT3G42786
hypothetical protein
Chr5_-_14117927 0.49 AT5G35965.1
AT5G35965

Chr5_+_2396708 0.49 AT5G07572.1
AT5G07572
hypothetical protein
Chr3_-_16939766 0.49 AT3G46120.1
PAP19
purple acid phosphatase 19
Chr5_+_14546924 0.49 AT5G36900.1
AT5G36900
hypothetical protein
Chr3_-_7802408 0.49 AT3G22136.1
AT3G22136

Chr2_-_1734471 0.48 AT2G04930.1
AT2G04930
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr4_+_3136680 0.48 AT4G06496.1
AT4G06496

Chr1_+_17661095 0.48 AT1G47920.1
AT1G47920
RNI-like superfamily protein
Chr1_+_27959527 0.48 AT1G74380.1
XXT5
xyloglucan xylosyltransferase 5
Chr1_+_21544835 0.48 AT1G58190.4
RLP9
receptor like protein 9

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G24050

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 7.4 GO:0006567 threonine catabolic process(GO:0006567)
0.5 2.1 GO:0080003 thalianol metabolic process(GO:0080003)
0.4 2.7 GO:0009745 sucrose mediated signaling(GO:0009745)
0.3 1.0 GO:0090058 metaxylem development(GO:0090058)
0.3 1.1 GO:0090172 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.3 0.8 GO:0071242 cellular response to ammonium ion(GO:0071242)
0.2 1.0 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.2 1.3 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.2 1.4 GO:0031222 arabinan catabolic process(GO:0031222)
0.2 0.5 GO:0030638 polyketide metabolic process(GO:0030638)
0.2 0.7 GO:0097438 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438) negative regulation of seed maturation(GO:2000692)
0.2 0.8 GO:1902767 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.1 2.1 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 0.5 GO:0010080 regulation of floral meristem growth(GO:0010080) inflorescence meristem growth(GO:0010450)
0.1 0.3 GO:0046521 sphingoid catabolic process(GO:0046521)
0.1 2.0 GO:0006826 iron ion transport(GO:0006826)
0.1 0.9 GO:1990937 xylan acetylation(GO:1990937)
0.1 0.4 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.1 0.8 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.1 0.3 GO:1901271 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.1 0.2 GO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.1 0.2 GO:1901379 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.1 0.5 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 0.5 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.1 2.2 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.1 0.6 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.1 0.5 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.5 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.0 0.3 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.4 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.0 0.8 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.6 GO:0045338 farnesyl diphosphate metabolic process(GO:0045338)
0.0 1.3 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.7 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 2.7 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.1 GO:0006148 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.0 0.2 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.6 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.0 0.8 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.0 0.5 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.1 GO:0019474 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.0 0.6 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 1.7 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 1.0 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.0 0.4 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.3 GO:0080183 response to photooxidative stress(GO:0080183)
0.0 0.2 GO:0015804 neutral amino acid transport(GO:0015804)
0.0 0.3 GO:1902074 response to salt(GO:1902074)
0.0 1.9 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.0 0.5 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 0.8 GO:0010214 seed coat development(GO:0010214)
0.0 1.1 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 1.9 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 1.2 GO:0048825 cotyledon development(GO:0048825)
0.0 0.9 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.5 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 0.2 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.0 0.6 GO:0019915 lipid storage(GO:0019915)
0.0 0.2 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 0.6 GO:0010223 secondary shoot formation(GO:0010223) shoot axis formation(GO:0010346)
0.0 0.4 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.0 0.1 GO:0030002 cellular anion homeostasis(GO:0030002)
0.0 0.6 GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.0 0.1 GO:0080119 ER body organization(GO:0080119)
0.0 0.6 GO:0009685 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.0 1.1 GO:0006885 regulation of pH(GO:0006885)
0.0 1.1 GO:0008283 cell proliferation(GO:0008283)
0.0 0.1 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.0 0.3 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.1 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.0 0.6 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 2.8 GO:0071456 cellular response to hypoxia(GO:0071456)
0.0 0.5 GO:0010197 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.1 GO:0034991 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.1 1.3 GO:0005801 cis-Golgi network(GO:0005801)
0.1 0.2 GO:0070847 core mediator complex(GO:0070847)
0.1 0.2 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.1 0.9 GO:0009531 secondary cell wall(GO:0009531)
0.0 0.6 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.6 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.3 GO:0000813 ESCRT I complex(GO:0000813)
0.0 2.3 GO:0010008 endosome membrane(GO:0010008)
0.0 0.6 GO:0031012 extracellular matrix(GO:0031012)
0.0 1.6 GO:0005811 lipid particle(GO:0005811)
0.0 2.7 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.5 GO:0035838 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 0.5 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.5 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.1 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.0 1.3 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.2 GO:0045257 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.0 1.3 GO:0042025 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 7.4 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.3 0.8 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.2 3.2 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.2 0.6 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.2 2.7 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.2 1.0 GO:0015105 arsenite transmembrane transporter activity(GO:0015105)
0.1 1.3 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.1 0.4 GO:0004298 threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.1 1.0 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.1 0.6 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 1.4 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 1.2 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.1 2.0 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 0.5 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 1.0 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.2 GO:0004484 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192)
0.1 0.5 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 0.6 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 1.1 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.0 1.8 GO:0016597 amino acid binding(GO:0016597)
0.0 1.1 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 2.2 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 1.3 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 1.3 GO:0005179 hormone activity(GO:0005179)
0.0 0.2 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.0 1.3 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 1.2 GO:0010333 terpene synthase activity(GO:0010333)
0.0 0.1 GO:0016748 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.0 0.6 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 5.2 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 0.1 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.0 0.5 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 0.2 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.0 0.2 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.0 0.1 GO:0032131 alkylated DNA binding(GO:0032131)
0.0 0.5 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 2.1 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.1 GO:0015928 fucosidase activity(GO:0015928)
0.0 0.4 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.4 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.8 GO:0005451 monovalent cation:proton antiporter activity(GO:0005451)
0.0 0.1 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 0.7 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.2 GO:0000036 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process(GO:0000036) ACP phosphopantetheine attachment site binding(GO:0044620) prosthetic group binding(GO:0051192)
0.0 0.1 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.5 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.6 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 PID EPHA2 FWD PATHWAY EPHA2 forward signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.1 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.0 0.2 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation