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GSE130291:vernalization in Arabidopsis thaliana
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Results for AT3G23210
Z-value: 0.32
Transcription factors associated with AT3G23210
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
AT3G23210
|
AT3G23210 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| bHLH34 | arTal_v1_Chr3_-_8285081_8285081 | 0.16 | 5.8e-01 | Click! |
Activity profile of AT3G23210 motif
Sorted Z-values of AT3G23210 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| Chr3_-_21085245 | 0.93 |
AT3G56970.1
|
bHLH38
|
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| Chr2_-_17199320 | 0.85 |
AT2G41240.2
AT2G41240.1 |
BHLH100
|
basic helix-loop-helix protein 100 |
| Chr3_-_21087710 | 0.60 |
AT3G56980.1
|
bHLH39
|
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| Chr5_-_1139631 | 0.48 |
AT5G04150.2
AT5G04150.1 |
BHLH101
|
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| Chr4_+_8299778 | 0.04 |
AT4G14410.3
AT4G14410.2 |
bHLH104
|
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| Chr4_+_8299397 | 0.02 |
AT4G14410.1
|
bHLH104
|
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
Network of associatons between targets according to the STRING database.
First level regulatory network of AT3G23210
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.3 | 2.9 | GO:0010106 | cellular response to iron ion starvation(GO:0010106) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 2.9 | GO:0090575 | RNA polymerase II transcription factor complex(GO:0090575) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 2.9 | GO:0008134 | transcription factor binding(GO:0008134) |