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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT3G17730

Z-value: 1.17

Transcription factors associated with AT3G17730

Gene Symbol Gene ID Gene Info
AT3G17730 NAC domain containing protein 57

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC057arTal_v1_Chr3_+_6064272_60642720.107.4e-01Click!

Activity profile of AT3G17730 motif

Sorted Z-values of AT3G17730 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_14827211 2.67 AT4G30280.1
xyloglucan endotransglucosylase/hydrolase 18
Chr4_-_7421828 2.37 AT4G12520.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_29130375 1.87 AT1G77520.1
O-methyltransferase family protein
Chr4_+_13128394 1.85 AT4G25810.1
xyloglucan endotransglycosylase 6
Chr1_+_29135904 1.82 AT1G77530.1
AT1G77530.2
O-methyltransferase family protein
Chr5_+_1629610 1.68 AT5G05500.1
Pollen Ole e 1 allergen and extensin family protein
Chr5_+_4488476 1.65 AT5G13930.1
Chalcone and stilbene synthase family protein
Chr5_-_15167859 1.65 AT5G38020.2
AT5G38020.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_15382071 1.60 AT5G38420.1
Ribulose bisphosphate carboxylase (small chain) family protein
Chr3_+_8703220 1.59 AT3G24100.1
Uncharacterized protein family SERF
Chr3_-_17008528 1.49 AT3G46280.1
kinase-like protein
Chr1_+_24257216 1.48 AT1G65310.1
xyloglucan endotransglucosylase/hydrolase 17
Chr3_+_9208861 1.48 AT3G25290.1
AT3G25290.2
Auxin-responsive family protein
Chr1_+_24257054 1.47 AT1G65310.2
xyloglucan endotransglucosylase/hydrolase 17
Chr2_+_15445294 1.46 AT2G36830.1
gamma tonoplast intrinsic protein
Chr3_+_512220 1.46 AT3G02480.1
Late embryogenesis abundant protein (LEA) family protein
Chr1_-_24558322 1.44 AT1G65970.1
thioredoxin-dependent peroxidase 2
Chr2_+_19151481 1.39 AT2G46650.1
cytochrome B5 isoform C
Chr2_-_15036556 1.34 AT2G35770.1
serine carboxypeptidase-like 28
Chr4_-_12339967 1.30 AT4G23690.1
Disease resistance-responsive (dirigent-like protein) family protein
Chr3_-_3993886 1.26 AT3G12580.1
heat shock protein 70
Chr4_-_7493080 1.25 AT4G12730.1
FASCICLIN-like arabinogalactan 2
Chr3_-_20418910 1.25 AT3G55090.1
ABC-2 type transporter family protein
Chr1_+_6568002 1.24 AT1G19020.1
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Chr4_+_18519599 1.23 AT4G39940.1
APS-kinase 2
Chr2_-_16780368 1.23 AT2G40170.1
Stress induced protein
Chr1_-_30173109 1.23 AT1G80240.1
choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)
Chr5_-_3517035 1.22 AT5G11070.1
hypothetical protein
Chr4_+_14517393 1.21 AT4G29610.1
Cytidine/deoxycytidylate deaminase family protein
Chr5_-_18371021 1.21 AT5G45340.2
AT5G45340.1
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr4_-_14542565 1.20 AT4G29690.1
Alkaline-phosphatase-like family protein
Chr1_+_3664187 1.19 AT1G10960.1
ferredoxin 1
Chr3_+_9480746 1.18 AT3G25900.1
AT3G25900.3
AT3G25900.2
Homocysteine S-methyltransferase family protein
Chr2_+_11012499 1.17 AT2G25810.1
tonoplast intrinsic protein 4;1
Chr2_-_14541617 1.16 AT2G34500.1
cytochrome P450, family 710, subfamily A, polypeptide 1
Chr5_-_17099595 1.15 AT5G42650.1
allene oxide synthase
Chr5_+_8042853 1.14 AT5G23860.1
AT5G23860.2
tubulin beta 8
Chr3_-_3059148 1.13 AT3G09940.2
AT3G09940.1
monodehydroascorbate reductase
Chr4_-_18581696 1.10 AT4G40090.1
arabinogalactan protein 3
Chr1_+_8709941 1.08 AT1G24580.1
RING/U-box superfamily protein
Chr4_-_11896480 1.07 AT4G22590.1
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr3_+_8414616 1.05 AT3G23470.2
AT3G23470.3
AT3G23470.1
Cyclopropane-fatty-acyl-phospholipid synthase
Chr4_-_993039 1.04 AT4G02270.1
root hair specific 13
Chr2_-_6867004 1.02 AT2G15760.1
calmodulin-binding protein (DUF1645)
Chr2_+_19437648 1.02 AT2G47360.1
transmembrane protein
Chr3_-_10590685 1.00 AT3G28340.1
galacturonosyltransferase-like 10
Chr1_-_27865694 1.00 AT1G74100.1
sulfotransferase 16
Chr5_-_37999 0.99 AT5G01100.1
O-fucosyltransferase family protein
Chr2_+_17854557 0.99 AT2G42900.1
Plant basic secretory protein (BSP) family protein
Chr2_+_8144881 0.99 AT2G18800.1
xyloglucan endotransglucosylase/hydrolase 21
Chr3_+_18704764 0.99 AT3G50400.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_6000447 0.99 AT3G17520.1
Late embryogenesis abundant protein (LEA) family protein
Chr1_-_20160864 0.98 AT1G54010.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_+_22075277 0.98 AT5G54370.1
Late embryogenesis abundant (LEA) protein-like protein
Chr4_+_13130291 0.98 AT4G25820.1
xyloglucan endotransglucosylase/hydrolase 14
Chr2_-_16493343 0.98 AT2G39510.1
nodulin MtN21 /EamA-like transporter family protein
Chr1_+_4864881 0.97 AT1G14240.2
AT1G14240.4
AT1G14240.1
AT1G14240.3
GDA1/CD39 nucleoside phosphatase family protein
Chr4_+_17752079 0.96 AT4G37770.1
1-amino-cyclopropane-1-carboxylate synthase 8
Chr5_-_7805968 0.96 AT5G23190.1
cytochrome P450, family 86, subfamily B, polypeptide 1
Chr5_-_22024658 0.96 AT5G54240.1
membrane lipoprotein lipid attachment site-like protein, putative (DUF1223)
Chr4_+_4886962 0.95 AT4G08040.1
1-aminocyclopropane-1-carboxylate synthase 11
Chr1_-_10127098 0.94 AT1G29025.1
Calcium-binding EF-hand family protein
Chr5_-_17831336 0.94 AT5G44260.1
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr1_+_5204312 0.93 AT1G15125.1
AT1G15125.2
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_13275200 0.92 AT4G26200.1
1-amino-cyclopropane-1-carboxylate synthase 7
Chr1_+_11928757 0.90 AT1G32920.1
hypothetical protein
Chr2_+_7275657 0.88 AT2G16760.1
Calcium-dependent phosphotriesterase superfamily protein
Chr4_-_12471261 0.88 AT4G24015.1
RING/U-box superfamily protein
Chr2_-_16198577 0.88 AT2G38750.1
annexin 4
Chr2_-_14740146 0.88 AT2G34930.1
disease resistance family protein / LRR family protein
Chr5_-_216773 0.88 AT5G01550.1
lectin receptor kinase a4.1
Chr1_-_23013477 0.88 AT1G62290.5
AT1G62290.6
AT1G62290.1
AT1G62290.3
AT1G62290.4
AT1G62290.2
Saposin-like aspartyl protease family protein
Chr3_+_16892702 0.87 AT3G45960.2
AT3G45960.1
expansin-like A3
Chr5_-_22358381 0.86 AT5G55090.1
AT5G55090.2
mitogen-activated protein kinase kinase kinase 15
Chr1_-_7388512 0.86 AT1G21100.1
O-methyltransferase family protein
Chr5_-_23289635 0.86 AT5G57510.1
cotton fiber protein
Chr2_-_16198832 0.86 AT2G38750.2
annexin 4
Chr4_-_17267472 0.85 AT4G36610.1
alpha/beta-Hydrolases superfamily protein
Chr1_+_5940292 0.85 AT1G17345.1
SAUR-like auxin-responsive protein family
Chr1_+_5596633 0.83 AT1G16370.1
organic cation/carnitine transporter 6
Chr5_+_8148544 0.82 AT5G24100.1
Leucine-rich repeat protein kinase family protein
Chr3_-_15953346 0.81 AT3G44260.1
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr5_+_430858 0.81 AT5G02180.1
AT5G02180.2
Transmembrane amino acid transporter family protein
Chr5_+_3545211 0.80 AT5G11140.1
phospholipase-like protein (PEARLI 4) family protein
Chr2_-_18463533 0.80 AT2G44790.1
uclacyanin 2
Chr5_-_23873691 0.79 AT5G59130.1
AT5G59130.2
AT5G59130.3
AT5G59130.4
Subtilase family protein
Chr4_+_160643 0.79 AT4G00360.1
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr3_+_3638178 0.78 AT3G11550.1
Uncharacterized protein family (UPF0497)
Chr4_-_12147993 0.78 AT4G23200.2
AT4G23200.1
cysteine-rich RLK (RECEPTOR-like protein kinase) 12
Chr4_+_13723610 0.77 AT4G27435.1
fiber (DUF1218)
Chr3_+_18643860 0.77 AT3G50300.1
HXXXD-type acyl-transferase family protein
Chr2_-_14537556 0.76 AT2G34490.1
cytochrome P450, family 710, subfamily A, polypeptide 2
Chr5_+_3206140 0.76 AT5G10210.1
nitric oxide synthase-interacting protein
Chr3_-_21931570 0.75 AT3G59340.1
AT3G59340.3
AT3G59340.4
solute carrier family 35 protein (DUF914)
Chr5_-_4423095 0.75 AT5G13700.1
polyamine oxidase 1
Chr4_+_12539656 0.75 AT4G24160.1
AT4G24160.2
alpha/beta-Hydrolases superfamily protein
Chr1_-_59215 0.75 AT1G01120.1
3-ketoacyl-CoA synthase 1
Chr4_-_17300367 0.74 AT4G36700.1
RmlC-like cupins superfamily protein
Chr3_+_20005616 0.74 AT3G54020.1
Inositol phosphorylceramide synthase 1
Chr1_-_20015038 0.74 AT1G53625.1
hypothetical protein
Chr5_-_15385247 0.73 AT5G38430.2
AT5G38430.1
Ribulose bisphosphate carboxylase (small chain) family protein
Chr1_+_9427804 0.73 AT1G27140.1
glutathione S-transferase tau 14
Chr1_-_23257463 0.72 AT1G62800.1
AT1G62800.3
AT1G62800.2
aspartate aminotransferase 4
Chr5_+_25721733 0.72 AT5G64310.1
arabinogalactan protein 1
Chr2_+_10066117 0.72 AT2G23680.2
AT2G23680.1
Cold acclimation protein WCOR413 family
Chr3_+_1440014 0.71 AT3G05150.1
AT3G05150.2
AT3G05150.3
Major facilitator superfamily protein
Chr1_-_27265806 0.71 AT1G72430.1
SAUR-like auxin-responsive protein family
Chr2_-_13784471 0.71 AT2G32460.2
AT2G32460.1
myb domain protein 101
Chr3_+_983057 0.70 AT3G03850.1
SAUR-like auxin-responsive protein family
Chr2_+_16782366 0.70 AT2G40180.1
phosphatase 2C5
Chr1_+_6061895 0.70 AT1G17620.1
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr2_+_18958999 0.69 AT2G46140.1
Late embryogenesis abundant protein
Chr5_+_9050660 0.69 AT5G25930.1
kinase family with leucine-rich repeat domain-containing protein
Chr1_-_6101983 0.69 AT1G17744.1
hypothetical protein
Chr3_-_314120 0.68 AT3G01900.1
cytochrome P450, family 94, subfamily B, polypeptide 2
Chr2_-_17199320 0.68 AT2G41240.2
AT2G41240.1
basic helix-loop-helix protein 100
Chr5_+_18875382 0.68 AT5G46530.1
AWPM-19-like family protein
Chr2_-_10055323 0.68 AT2G23630.1
AT2G23630.2
SKU5 similar 16
Chr5_+_7426310 0.68 AT5G22410.1
root hair specific 18
Chr2_-_8533779 0.68 AT2G19800.1
myo-inositol oxygenase 2
Chr2_+_18172889 0.68 AT2G43880.1
AT2G43880.2
Pectin lyase-like superfamily protein
Chr1_+_541236 0.68 AT1G02570.1
transmembrane protein
Chr5_+_4623198 0.68 AT5G14340.1
AT5G14340.2
myb domain protein 40
Chr4_+_8688250 0.67 AT4G15233.1
AT4G15233.7
AT4G15233.8
AT4G15233.2
ABC-2 and Plant PDR ABC-type transporter family protein
Chr5_+_8323895 0.67 AT5G24380.1
YELLOW STRIPE like 2
Chr4_+_564760 0.67 AT4G01360.1
BPS1-like protein
Chr2_-_17992047 0.67 AT2G43290.1
Calcium-binding EF-hand family protein
Chr4_-_6260259 0.67 AT4G09990.1
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Chr5_-_20544857 0.67 AT5G50450.1
HCP-like superfamily protein with MYND-type zinc finger
Chr3_+_18487411 0.66 AT3G49845.2
cysteine-rich TM module stress tolerance protein
Chr3_+_18487130 0.66 AT3G49845.1
cysteine-rich TM module stress tolerance protein
Chr5_-_15461459 0.66 AT5G38610.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr4_-_10828618 0.66 AT4G19980.1
hypothetical protein
Chr3_+_21893812 0.66 AT3G59220.1
pirin
Chr3_+_5249112 0.65 AT3G15518.1
hypothetical protein
Chr2_-_7707954 0.65 AT2G17740.1
Cysteine/Histidine-rich C1 domain family protein
Chr5_-_2655732 0.65 AT5G08250.1
AT5G08250.2
Cytochrome P450 superfamily protein
Chr1_+_23199612 0.65 AT1G62660.2
AT1G62660.1
AT1G62660.3
Glycosyl hydrolases family 32 protein
Chr2_-_18077517 0.65 AT2G43570.1
chitinase
Chr5_+_4967011 0.65 AT5G15290.1
Uncharacterized protein family (UPF0497)
Chr5_-_24326827 0.64 AT5G60490.1
FASCICLIN-like arabinogalactan-protein 12
Chr1_+_729830 0.64 AT1G03070.1
AT1G03070.3
AT1G03070.2
Bax inhibitor-1 family protein
Chr1_-_24395503 0.64 AT1G65610.1
Six-hairpin glycosidases superfamily protein
Chr5_+_1835047 0.63 AT5G06090.1
glycerol-3-phosphate acyltransferase 7
Chr3_-_4620305 0.63 AT3G13980.1
SKI/DACH domain protein
Chr2_+_18842516 0.63 AT2G45750.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_-_17497276 0.63 AT4G37160.1
SKU5 similar 15
Chr5_+_18345534 0.63 AT5G45280.2
AT5G45280.1
Pectinacetylesterase family protein
Chr1_-_9753952 0.62 AT1G27990.1
transmembrane protein
Chr4_-_14545310 0.62 AT4G29700.1
Alkaline-phosphatase-like family protein
Chr1_-_26790262 0.62 AT1G71015.2
AT1G71015.1
plastid movement impaired protein
Chr2_+_9903215 0.62 AT2G23270.1
transmembrane protein
Chr1_-_10905724 0.62 AT1G30750.1
TPRXL
Chr4_-_17497124 0.61 AT4G37160.2
SKU5 similar 15
Chr4_-_11397726 0.61 AT4G21390.1
AT4G21390.2
S-locus lectin protein kinase family protein
Chr1_+_23200591 0.61 AT1G62660.4
Glycosyl hydrolases family 32 protein
Chr2_+_3618058 0.61 AT2G08986.1
hypothetical protein
Chr3_+_6045002 0.60 AT3G17690.3
AT3G17690.2
AT3G17690.1
cyclic nucleotide gated channel 19
Chr5_-_19996357 0.60 AT5G49320.1
transmembrane protein, putative (DUF1218)
Chr5_-_5741500 0.60 AT5G17420.1
Cellulose synthase family protein
Chr5_+_19281374 0.60 AT5G47530.1
Auxin-responsive family protein
Chr1_+_9191503 0.59 AT1G26600.2
AT1G26600.1
CLAVATA3/ESR-RELATED 9
Chr1_+_27127170 0.59 AT1G72100.1
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
Chr5_-_19974530 0.59 AT5G49270.1
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Chr1_+_16871696 0.59 AT1G44575.2
Chlorophyll A-B binding family protein
Chr4_-_16732923 0.59 AT4G35160.1
O-methyltransferase family protein
Chr3_+_5264001 0.59 AT3G15540.1
indole-3-acetic acid inducible 19
Chr1_-_3416474 0.59 AT1G10400.1
UDP-Glycosyltransferase superfamily protein
Chr1_+_16871511 0.58 AT1G44575.3
Chlorophyll A-B binding family protein
Chr1_-_10382153 0.58 AT1G29690.1
MAC/Perforin domain-containing protein
Chr3_-_4799612 0.58 AT3G14370.1
Protein kinase superfamily protein
Chr1_+_16870221 0.58 AT1G44575.1
Chlorophyll A-B binding family protein
Chr3_+_5133444 0.58 AT3G15240.2
Serine/threonine-protein kinase WNK (With No Lysine)-like protein
Chr5_-_24333144 0.58 AT5G60520.1
Late embryogenesis abundant (LEA) protein-like protein
Chr5_+_21138703 0.58 AT5G52050.1
MATE efflux family protein
Chr1_-_1437763 0.58 AT1G05020.1
ENTH/ANTH/VHS superfamily protein
Chr3_-_19066560 0.58 AT3G51360.1
AT3G51360.4
AT3G51360.10
AT3G51360.3
AT3G51360.2
AT3G51360.6
AT3G51360.9
AT3G51360.7
AT3G51360.8
AT3G51360.5
Eukaryotic aspartyl protease family protein
Chr2_+_18425111 0.58 AT2G44670.1
senescence-associated family protein (DUF581)
Chr2_-_17882636 0.57 AT2G43000.1
AT2G43000.2
NAC domain containing protein 42
Chr1_+_12964986 0.57 AT1G35330.1
RING/U-box superfamily protein
Chr5_-_20468128 0.57 AT5G50300.1
AT5G50300.2
Xanthine/uracil permease family protein
Chr2_+_13704068 0.57 AT2G32270.1
zinc transporter 3 precursor
Chr3_-_21592938 0.57 AT3G58350.1
AT3G58350.2
RESTRICTED TEV MOVEMENT 3
Chr5_+_16431304 0.57 AT5G41040.1
AT5G41040.2
HXXXD-type acyl-transferase family protein
Chr1_-_2962207 0.56 AT1G09170.6
AT1G09170.7
AT1G09170.8
AT1G09170.1
AT1G09170.2
AT1G09170.4
AT1G09170.3
AT1G09170.5
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein
Chr4_-_10731808 0.56 AT4G19720.1
Glycosyl hydrolase family protein with chitinase insertion domain-containing protein
Chr1_+_4069992 0.56 AT1G12040.1
leucine-rich repeat/extensin 1
Chr5_+_21352557 0.56 AT5G52640.1
heat shock-like protein
Chr3_+_8581890 0.56 AT3G23800.2
selenium-binding protein 3
Chr4_+_12920742 0.55 AT4G25220.1
root hair specific 15
Chr1_-_24062804 0.55 AT1G64780.1
ammonium transporter 1;2
Chr1_-_2152541 0.55 AT1G07000.1
exocyst subunit exo70 family protein B2
Chr3_+_8581446 0.55 AT3G23800.1
selenium-binding protein 3
Chr1_-_8153530 0.55 AT1G23020.2
AT1G23020.7
AT1G23020.6
AT1G23020.5
AT1G23020.4
AT1G23020.3
AT1G23020.1
ferric reduction oxidase 3
Chr1_+_27506485 0.54 AT1G73160.1
UDP-Glycosyltransferase superfamily protein
Chr2_+_19253670 0.54 AT2G46860.1
pyrophosphorylase 3
Chr4_+_8687354 0.54 AT4G15233.3
AT4G15233.4
ABC-2 and Plant PDR ABC-type transporter family protein
Chr4_-_17376279 0.54 AT4G36880.1
cysteine proteinase1
Chr5_+_23400715 0.54 AT5G57760.1
hypothetical protein
Chr1_+_24637196 0.53 AT1G66160.2
AT1G66160.1
CYS, MET, PRO, and GLY protein 1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G17730

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.5 GO:0015840 urea transport(GO:0015840)
0.5 1.4 GO:0090224 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.4 1.2 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.3 1.0 GO:0090547 response to low humidity(GO:0090547)
0.3 1.0 GO:0035445 borate transmembrane transport(GO:0035445)
0.3 0.6 GO:0042539 hypotonic salinity response(GO:0042539)
0.3 1.4 GO:0007043 cell-cell junction assembly(GO:0007043)
0.3 1.3 GO:1901568 icosanoid metabolic process(GO:0006690) fatty acid derivative metabolic process(GO:1901568)
0.3 1.3 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.3 0.8 GO:0055089 fatty acid homeostasis(GO:0055089)
0.2 1.0 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.2 1.3 GO:0046345 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.2 1.2 GO:0009972 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.2 0.2 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.2 1.3 GO:0043066 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.2 0.2 GO:0051480 regulation of cytosolic calcium ion concentration(GO:0051480)
0.2 0.9 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.2 0.6 GO:0010272 response to silver ion(GO:0010272)
0.2 0.6 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.2 0.8 GO:0046208 spermine catabolic process(GO:0046208)
0.2 0.5 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.1 0.6 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 0.4 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.1 0.6 GO:0099636 cytoplasmic streaming(GO:0099636)
0.1 0.7 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.1 0.6 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.1 0.1 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
0.1 1.3 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 0.7 GO:0019310 inositol catabolic process(GO:0019310)
0.1 0.9 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.1 0.4 GO:0000032 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
0.1 8.3 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.4 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 0.4 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 1.0 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.1 0.4 GO:2000692 negative regulation of seed maturation(GO:2000692)
0.1 0.7 GO:1990019 protein storage vacuole organization(GO:1990019)
0.1 0.5 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.1 0.6 GO:0071276 phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.1 0.5 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.1 1.0 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 0.3 GO:0002215 defense response to nematode(GO:0002215)
0.1 1.2 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.1 0.5 GO:0016137 glycoside metabolic process(GO:0016137)
0.1 0.3 GO:0042908 xenobiotic transport(GO:0042908)
0.1 0.7 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.4 GO:0051938 L-amino acid import(GO:0043092) L-glutamate import(GO:0051938) L-alpha-amino acid transmembrane transport(GO:1902475)
0.1 1.0 GO:0080086 stamen filament development(GO:0080086)
0.1 0.5 GO:0046683 response to organophosphorus(GO:0046683)
0.1 0.5 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
0.1 0.3 GO:0046102 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.1 0.5 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.1 0.3 GO:0017145 stem cell division(GO:0017145)
0.1 1.9 GO:0045493 xylan catabolic process(GO:0045493)
0.1 0.3 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.1 0.4 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 1.0 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.1 0.5 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.4 GO:0010338 leaf formation(GO:0010338)
0.1 0.3 GO:0090603 sieve element differentiation(GO:0090603)
0.1 0.4 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 2.1 GO:0010227 floral organ abscission(GO:0010227)
0.1 0.5 GO:0000187 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.1 0.2 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.1 1.5 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 1.2 GO:0006032 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.1 0.7 GO:0010230 alternative respiration(GO:0010230)
0.1 0.7 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.1 1.9 GO:0045492 xylan biosynthetic process(GO:0045492)
0.1 0.7 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.1 0.9 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 0.7 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.1 0.3 GO:0071323 cellular response to chitin(GO:0071323)
0.1 0.3 GO:0071836 nectar secretion(GO:0071836)
0.1 0.2 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.1 0.4 GO:0046339 diacylglycerol metabolic process(GO:0046339)
0.1 0.8 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.1 0.4 GO:0046949 fatty-acyl-CoA biosynthetic process(GO:0046949)
0.1 0.6 GO:0006561 proline biosynthetic process(GO:0006561)
0.1 1.7 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 0.3 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.1 1.2 GO:0000038 very long-chain fatty acid metabolic process(GO:0000038)
0.1 0.2 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.1 0.3 GO:1901656 glycoside transport(GO:1901656)
0.1 0.6 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.1 0.3 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.1 1.1 GO:0002239 response to oomycetes(GO:0002239)
0.1 0.2 GO:2000082 regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.1 0.8 GO:0052325 cell wall pectin biosynthetic process(GO:0052325)
0.0 0.5 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.0 0.2 GO:0010226 response to lithium ion(GO:0010226)
0.0 0.4 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 1.5 GO:1900674 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.8 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.0 0.4 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.0 0.2 GO:0042550 photosystem I stabilization(GO:0042550)
0.0 0.4 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.0 0.6 GO:0080027 response to herbivore(GO:0080027)
0.0 0.4 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 1.1 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.4 GO:0006308 DNA catabolic process(GO:0006308)
0.0 0.3 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.3 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.0 0.7 GO:0010440 stomatal lineage progression(GO:0010440)
0.0 0.2 GO:0036473 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.0 1.3 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.1 GO:1904062 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.0 0.4 GO:0043901 negative regulation of multi-organism process(GO:0043901)
0.0 0.4 GO:0030307 positive regulation of cell growth(GO:0030307)
0.0 1.4 GO:0085029 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.0 0.2 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.6 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 0.3 GO:0019264 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.0 0.3 GO:0044209 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096) AMP salvage(GO:0044209)
0.0 0.6 GO:0015770 sucrose transport(GO:0015770)
0.0 0.4 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.0 0.7 GO:0002229 defense response to oomycetes(GO:0002229)
0.0 0.5 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.0 0.7 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.0 0.1 GO:0080051 cutin transport(GO:0080051)
0.0 1.3 GO:1901800 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.0 0.3 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.2 GO:0006116 NADH oxidation(GO:0006116)
0.0 0.1 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.0 0.1 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.4 GO:0019471 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 3.5 GO:0010054 trichoblast differentiation(GO:0010054)
0.0 0.3 GO:1903340 positive regulation of secondary cell wall biogenesis(GO:1901348) positive regulation of cell wall organization or biogenesis(GO:1903340)
0.0 0.5 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.0 0.9 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.8 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.6 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.2 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.0 0.5 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.1 GO:0019406 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.0 0.3 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.1 GO:0034963 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.0 0.2 GO:0009643 photosynthetic acclimation(GO:0009643)
0.0 0.2 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.0 0.5 GO:0010082 regulation of root meristem growth(GO:0010082)
0.0 0.2 GO:0010358 leaf shaping(GO:0010358)
0.0 0.1 GO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.0 0.3 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.0 0.4 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.2 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.0 0.3 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.3 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.0 0.1 GO:0006527 arginine catabolic process(GO:0006527)
0.0 0.2 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 0.2 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.0 0.3 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.2 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.0 0.2 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.0 0.2 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0 0.3 GO:0009085 lysine biosynthetic process(GO:0009085)
0.0 2.0 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.4 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 0.1 GO:0042549 photosystem II stabilization(GO:0042549)
0.0 0.3 GO:0009649 entrainment of circadian clock(GO:0009649) positive regulation of circadian rhythm(GO:0042753)
0.0 0.2 GO:0009088 threonine biosynthetic process(GO:0009088)
0.0 0.1 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 0.1 GO:0030100 regulation of endocytosis(GO:0030100)
0.0 0.9 GO:0006749 glutathione metabolic process(GO:0006749)
0.0 0.2 GO:0010052 guard cell differentiation(GO:0010052)
0.0 0.6 GO:0043622 cortical microtubule organization(GO:0043622)
0.0 0.5 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.1 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.0 0.1 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.2 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.2 GO:0019346 homoserine metabolic process(GO:0009092) transsulfuration(GO:0019346) homocysteine metabolic process(GO:0050667)
0.0 0.5 GO:0046246 terpene biosynthetic process(GO:0046246)
0.0 0.8 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.0 1.9 GO:0048588 developmental cell growth(GO:0048588)
0.0 0.3 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.1 GO:0045793 positive regulation of cell size(GO:0045793)
0.0 0.2 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 0.5 GO:0009960 endosperm development(GO:0009960)
0.0 1.2 GO:0071368 cellular response to cytokinin stimulus(GO:0071368)
0.0 0.2 GO:0015976 carbon utilization(GO:0015976)
0.0 0.1 GO:0000304 response to singlet oxygen(GO:0000304)
0.0 0.5 GO:0010582 floral meristem determinacy(GO:0010582)
0.0 0.2 GO:1904668 regulation of ubiquitin protein ligase activity(GO:1904666) positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 0.2 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.1 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.9 GO:0006887 exocytosis(GO:0006887)
0.0 0.6 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 3.3 GO:0032259 methylation(GO:0032259)
0.0 0.6 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.8 GO:0048544 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.0 0.1 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.1 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.1 GO:0000338 protein deneddylation(GO:0000338)
0.0 0.5 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.0 0.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.3 GO:0010214 seed coat development(GO:0010214)
0.0 0.2 GO:0071428 ribosomal subunit export from nucleus(GO:0000054) ribosome localization(GO:0033750) establishment of ribosome localization(GO:0033753) rRNA-containing ribonucleoprotein complex export from nucleus(GO:0071428)
0.0 0.2 GO:0007008 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 0.2 GO:0019915 lipid storage(GO:0019915)
0.0 0.5 GO:0000911 cytokinesis by cell plate formation(GO:0000911)
0.0 0.1 GO:0097036 regulation of plasma membrane sterol distribution(GO:0097036)
0.0 0.3 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.5 GO:0009827 plant-type cell wall modification(GO:0009827)
0.0 0.2 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.3 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.3 0.8 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.3 2.3 GO:0009503 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.1 0.6 GO:0010330 cellulose synthase complex(GO:0010330)
0.1 1.9 GO:0005880 nuclear microtubule(GO:0005880)
0.1 1.5 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.4 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.1 0.7 GO:0035619 root hair tip(GO:0035619)
0.1 0.7 GO:0005784 Sec61 translocon complex(GO:0005784)
0.1 1.1 GO:0045298 tubulin complex(GO:0045298)
0.1 0.9 GO:0048226 Casparian strip(GO:0048226)
0.1 0.2 GO:0030093 chloroplast photosystem I(GO:0030093)
0.1 0.2 GO:0009501 amyloplast(GO:0009501)
0.1 0.6 GO:0030139 endocytic vesicle(GO:0030139)
0.1 0.6 GO:0043230 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.1 0.5 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 1.0 GO:0051286 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.1 0.1 GO:0009897 external side of plasma membrane(GO:0009897)
0.1 0.2 GO:0070505 pollen coat(GO:0070505)
0.1 0.4 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.0 0.3 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 2.2 GO:0090406 pollen tube(GO:0090406)
0.0 0.7 GO:0016459 myosin complex(GO:0016459)
0.0 0.3 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.0 0.2 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0 0.5 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.2 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.6 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 1.1 GO:0005764 lysosome(GO:0005764)
0.0 8.8 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.4 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.0 0.7 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 4.9 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.1 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.0 0.5 GO:0000145 exocyst(GO:0000145)
0.0 0.7 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.4 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 1.0 GO:0010287 plastoglobule(GO:0010287)
0.0 0.2 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 0.3 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.0 0.5 GO:0005811 lipid particle(GO:0005811)
0.0 0.2 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.1 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.3 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 31.3 GO:0005576 extracellular region(GO:0005576)
0.0 0.2 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.1 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 0.3 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 5.6 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.6 1.9 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.6 1.8 GO:0051738 xanthophyll binding(GO:0051738)
0.5 1.5 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.5 1.8 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.4 1.2 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.3 1.7 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.3 1.0 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.3 0.9 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.3 0.9 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.3 1.7 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.3 0.8 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.3 1.3 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.2 0.7 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.2 1.1 GO:0008430 selenium binding(GO:0008430)
0.2 0.9 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.2 1.2 GO:0004126 cytidine deaminase activity(GO:0004126)
0.2 0.6 GO:0070704 sterol desaturase activity(GO:0070704)
0.2 0.6 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.2 1.0 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.2 2.2 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.2 0.8 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 3.8 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 1.3 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 1.6 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 1.6 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.1 1.0 GO:0019825 oxygen binding(GO:0019825)
0.1 0.7 GO:0050113 inositol oxygenase activity(GO:0050113)
0.1 0.4 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.1 1.2 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 1.3 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.1 0.8 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 0.6 GO:0015446 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) cadmium ion binding(GO:0046870)
0.1 0.7 GO:0052655 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 1.5 GO:0008061 chitin binding(GO:0008061)
0.1 0.5 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.1 0.4 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.1 0.3 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.1 2.7 GO:0008810 cellulase activity(GO:0008810)
0.1 0.5 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.1 0.6 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.1 1.4 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 1.3 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 1.0 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 3.9 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 0.4 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)
0.1 0.2 GO:0019789 SUMO transferase activity(GO:0019789)
0.1 2.7 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.1 0.3 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.7 GO:0009916 alternative oxidase activity(GO:0009916)
0.1 0.6 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.1 0.3 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.1 0.2 GO:0045430 chalcone isomerase activity(GO:0045430)
0.1 0.7 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 0.4 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 0.4 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.8 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.1 0.4 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.1 0.5 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.1 0.3 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.1 0.7 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.1 1.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.7 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 0.2 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.1 0.8 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.1 0.2 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 0.7 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.3 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.2 GO:0004556 alpha-amylase activity(GO:0004556)
0.1 0.1 GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen(GO:0016713)
0.1 0.2 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.1 1.5 GO:0051787 misfolded protein binding(GO:0051787)
0.1 0.9 GO:0070628 proteasome binding(GO:0070628)
0.1 1.4 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.1 1.3 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.7 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.1 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.0 0.3 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.0 0.8 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 0.8 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.2 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.0 0.2 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 0.1 GO:0016643 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.0 0.3 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.3 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.0 1.0 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.3 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.0 0.6 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.4 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 0.3 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.0 0.1 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.0 1.6 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.3 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.0 0.1 GO:0010242 oxygen evolving activity(GO:0010242)
0.0 0.2 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 1.3 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 0.4 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.7 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.3 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 1.1 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 2.9 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.2 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.0 0.1 GO:0042947 glucoside transmembrane transporter activity(GO:0042947) (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.0 0.1 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.0 0.6 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.5 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.4 GO:0004656 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0 0.5 GO:0004568 chitinase activity(GO:0004568)
0.0 0.1 GO:0004651 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192)
0.0 0.6 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 0.4 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.2 GO:0015563 allantoin uptake transmembrane transporter activity(GO:0005274) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.0 0.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.1 GO:1990259 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.0 3.1 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.2 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.1 GO:0008705 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.0 0.1 GO:0036456 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.0 0.3 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.3 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.0 2.6 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.2 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.0 0.2 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.0 0.1 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.0 0.2 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 0.1 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.0 0.3 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 1.0 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.3 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.1 GO:0000048 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.0 0.1 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.0 0.5 GO:0031386 protein tag(GO:0031386)
0.0 0.9 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 1.8 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 0.8 GO:0043022 ribosome binding(GO:0043022)
0.0 0.5 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 1.2 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.0 0.4 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.3 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 1.1 GO:0004185 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.0 0.3 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.0 0.2 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.2 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 1.2 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.3 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.0 0.5 GO:0005179 hormone activity(GO:0005179)
0.0 0.2 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 0.0 GO:0004071 aspartate-ammonia ligase activity(GO:0004071)
0.0 0.1 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.0 0.2 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 1.1 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 2.0 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.2 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 0.5 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.3 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.0 0.1 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.2 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.0 0.1 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.0 0.5 GO:0005262 calcium channel activity(GO:0005262)
0.0 0.1 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.0 0.2 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.3 GO:0016780 phosphotransferase activity, for other substituted phosphate groups(GO:0016780)
0.0 0.5 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.2 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.1 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.4 PID AURORA A PATHWAY Aurora A signaling
0.3 0.8 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.1 0.6 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.1 0.4 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 REACTOME NUCLEOTIDE BINDING DOMAIN LEUCINE RICH REPEAT CONTAINING RECEPTOR NLR SIGNALING PATHWAYS Genes involved in Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways
0.1 0.9 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.3 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.0 0.2 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.0 0.2 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis