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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT3G12720

Z-value: 2.13

Transcription factors associated with AT3G12720

Gene Symbol Gene ID Gene Info
AT3G12720
AT3G12720 myb domain protein 67

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB67arTal_v1_Chr3_-_4044715_40447150.797.1e-04Click!

Activity profile of AT3G12720 motif

Sorted Z-values of AT3G12720 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_28975255 4.23 AT1G77120.1
ADH1
alcohol dehydrogenase 1
Chr2_-_17710433 3.94 AT2G42530.1
COR15B
cold regulated 15b
Chr3_+_4104463 3.44 AT3G12900.1
AT3G12900
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_+_15451988 3.41 AT4G31940.1
CYP82C4
cytochrome P450, family 82, subfamily C, polypeptide 4
Chr1_+_3019639 3.30 AT1G09350.1
GolS3
galactinol synthase 3
Chr5_-_14753088 3.23 AT5G37260.1
RVE2
Homeodomain-like superfamily protein
Chr4_+_10707344 3.12 AT4G19690.2
AT4G19690.1
IRT1
iron-regulated transporter 1
Chr1_+_3020221 3.05 AT1G09350.2
GolS3
galactinol synthase 3
Chr1_+_209208 3.00 AT1G01580.1
FRO2
ferric reduction oxidase 2
Chr1_+_208995 2.99 AT1G01580.2
FRO2
ferric reduction oxidase 2
Chr4_-_15954803 2.57 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Chr5_-_5692920 2.56 AT5G17300.2
AT5G17300.1
RVE1
Homeodomain-like superfamily protein
Chr4_-_18472048 2.50 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
Chr3_-_7796310 2.47 AT3G22120.1
AT3G22120.2
CWLP
cell wall-plasma membrane linker protein
Chr5_+_20151163 2.46 AT5G49640.1
AT5G49640
hypothetical protein
Chr4_+_8827600 2.41 AT4G15430.2
AT4G15430.1
AT4G15430
ERD (early-responsive to dehydration stress) family protein
Chr3_+_2465235 2.23 AT3G07720.1
AT3G07720
Galactose oxidase/kelch repeat superfamily protein
Chr5_-_16252434 2.19 AT5G40590.1
AT5G40590
Cysteine/Histidine-rich C1 domain family protein
Chr3_-_20576249 2.15 AT3G55500.1
EXPA16
expansin A16
Chr2_+_12004658 2.14 AT2G28160.1
AT2G28160.2
FRU
FER-like regulator of iron uptake
Chr2_-_19370478 2.11 AT2G47180.1
GolS1
galactinol synthase 1
Chr5_+_15878698 2.03 AT5G39660.1
AT5G39660.3
AT5G39660.2
CDF2
cycling DOF factor 2
Chr3_+_19845097 1.98 AT3G53530.2
AT3G53530.1
NAKR3
Chloroplast-targeted copper chaperone protein
Chr1_-_26163715 1.95 AT1G69570.1
AT1G69570
Dof-type zinc finger DNA-binding family protein
Chr3_-_8085669 1.91 AT3G22840.1
ELIP1
Chlorophyll A-B binding family protein
Chr2_+_13381767 1.90 AT2G31380.1
STH
salt tolerance homologue
Chr1_+_3093644 1.89 AT1G09560.1
GLP5
germin-like protein 5
Chr3_+_2441565 1.89 AT3G07650.4
AT3G07650.1
AT3G07650.3
AT3G07650.2
COL9
CONSTANS-like 9
Chr1_-_18238497 1.88 AT1G49310.1
AT1G49310
transmembrane protein
Chr1_-_10164452 1.87 AT1G29090.1
AT1G29090
Cysteine proteinases superfamily protein
Chr3_-_2569700 1.86 AT3G08040.2
AT3G08040.1
FRD3
MATE efflux family protein
Chr5_-_5177897 1.86 AT5G15850.1
COL1
CONSTANS-like 1
Chr5_+_19481897 1.86 AT5G48070.1
XTH20
xyloglucan endotransglucosylase/hydrolase 20
Chr5_-_7054281 1.85 AT5G20830.3
SUS1
sucrose synthase 1
Chr2_-_12415661 1.83 AT2G28900.1
OEP16-1
outer plastid envelope protein 16-1
Chr2_+_16079679 1.82 AT2G38390.1
AT2G38390
Peroxidase superfamily protein
Chr1_-_3756998 1.81 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
Chr5_-_7054713 1.81 AT5G20830.1
SUS1
sucrose synthase 1
Chr1_-_16917053 1.80 AT1G44800.1
SIAR1
nodulin MtN21 /EamA-like transporter family protein
Chr2_+_9126263 1.79 AT2G21320.1
BBX18
B-box zinc finger family protein
Chr3_-_17475274 1.79 AT3G47420.3
AT3G47420.1
AT3G47420.2
G3Pp1
putative glycerol-3-phosphate transporter 1
Chr4_-_2992618 1.77 AT4G05631.1
AT4G05631
hypothetical protein
Chr5_-_22115539 1.77 AT5G54470.1
BBX29
B-box type zinc finger family protein
Chr1_+_18546086 1.76 AT1G50050.2
AT1G50050.1
AT1G50050
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr5_-_7055398 1.76 AT5G20830.2
SUS1
sucrose synthase 1
Chr3_-_10599042 1.75 AT3G28345.1
ABCB15
ABC transporter family protein
Chr2_+_9248525 1.75 AT2G21620.1
AT2G21620.2
RD2
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr4_-_18551183 1.73 AT4G40010.1
SNRK2.7
SNF1-related protein kinase 2.7
Chr3_+_5025383 1.71 AT3G14940.2
PPC3
phosphoenolpyruvate carboxylase 3
Chr1_-_20719165 1.71 AT1G55490.1
AT1G55490.2
AT1G55490.4
AT1G55490.3
AT1G55490.5
CPN60B
chaperonin 60 beta
Chr3_+_4449259 1.70 AT3G13610.1
AT3G13610
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_+_5025184 1.69 AT3G14940.1
PPC3
phosphoenolpyruvate carboxylase 3
Chr5_+_2866222 1.67 AT5G09220.1
AAP2
amino acid permease 2
Chr3_+_19825267 1.66 AT3G53480.1
ABCG37
pleiotropic drug resistance 9
Chr3_-_10790553 1.62 AT3G28740.1
CYP81D11
Cytochrome P450 superfamily protein
Chr5_+_22388782 1.62 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr3_+_1695156 1.61 AT3G05730.1
AT3G05730
defensin-like protein
Chr2_+_7316789 1.61 AT2G16890.3
AT2G16890.2
AT2G16890.1
AT2G16890.4
AT2G16890
UDP-Glycosyltransferase superfamily protein
Chr4_-_9583290 1.61 AT4G17030.1
EXLB1
expansin-like B1
Chr3_-_20629295 1.59 AT3G55610.1
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
Chr5_+_22388521 1.59 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr2_+_13987669 1.59 AT2G32960.1
PFA-DSP2
Phosphotyrosine protein phosphatases superfamily protein
Chr4_-_12345652 1.59 AT4G23700.2
CHX17
cation/H+ exchanger 17
Chr5_+_17937622 1.59 AT5G44530.3
AT5G44530.2
AT5G44530.1
AT5G44530
Subtilase family protein
Chr1_+_27538190 1.58 AT1G73220.1
OCT1
organic cation/carnitine transporter1
Chr3_-_20816035 1.57 AT3G56090.1
FER3
ferritin 3
Chr2_-_18082776 1.56 AT2G43590.1
AT2G43590
Chitinase family protein
Chr4_-_12346051 1.56 AT4G23700.1
CHX17
cation/H+ exchanger 17
Chr3_-_20629093 1.56 AT3G55610.2
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
Chr1_-_8711578 1.55 AT1G24575.1
AT1G24575
DEAD-box ATP-dependent RNA helicase-like protein
Chr3_+_5720941 1.54 AT3G16800.5
AT3G16800.4
AT3G16800.2
AT3G16800.6
AT3G16800.1
AT3G16800
Protein phosphatase 2C family protein
Chr3_+_8941066 1.54 AT3G24520.1
HSFC1
heat shock transcription factor C1
Chr1_-_8189220 1.53 AT1G23090.4
AT1G23090.1
AT1G23090.3
AT1G23090.2
AST91
sulfate transporter 91
Chr1_+_22198266 1.52 AT1G60190.1
PUB19
ARM repeat superfamily protein
Chr4_-_9779939 1.52 AT4G17550.1
G3Pp4
Major facilitator superfamily protein
Chr5_+_21771811 1.51 AT5G53590.1
AT5G53590
SAUR-like auxin-responsive protein family
Chr3_+_7959753 1.51 AT3G22440.1
AT3G22440
FRIGIDA-like protein
Chr4_-_12624039 1.50 AT4G24410.1
AT4G24410
hypothetical protein
Chr3_-_19747114 1.50 AT3G53260.1
PAL2
phenylalanine ammonia-lyase 2
Chr1_+_25016402 1.50 AT1G67030.1
ZFP6
zinc finger protein 6
Chr5_-_10092686 1.49 AT5G28080.7
AT5G28080.1
AT5G28080.6
AT5G28080.2
AT5G28080.5
AT5G28080.3
AT5G28080.4
AT5G28080.8
WNK9
Protein kinase superfamily protein
Chr5_-_23117403 1.48 AT5G57110.3
AT5G57110.1
AT5G57110.2
ACA8
autoinhibited Ca2+ -ATPase, isoform 8
Chr4_+_11182092 1.47 AT4G20890.1
TUB9
tubulin beta-9 chain
Chr2_+_2015624 1.47 AT2G05510.1
AT2G05510.3
AT2G05510.4
AT2G05510.2
AT2G05510.6
AT2G05510.5
AT2G05510
Glycine-rich protein family
Chr4_-_13016235 1.47 AT4G25470.1
CBF2
C-repeat/DRE binding factor 2
Chr1_+_25701770 1.46 AT1G68500.1
AT1G68500
hypothetical protein
Chr1_+_28829243 1.45 AT1G76800.1
AT1G76800
Vacuolar iron transporter (VIT) family protein
Chr1_-_507268 1.45 AT1G02460.1
AT1G02460
Pectin lyase-like superfamily protein
Chr4_+_16136749 1.44 AT4G33565.1
AT4G33565
RING/U-box superfamily protein
Chr5_-_5759817 1.44 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr1_-_30186716 1.43 AT1G80280.1
AT1G80280
alpha/beta-Hydrolases superfamily protein
Chr1_+_7404328 1.42 AT1G21140.1
AT1G21140
Vacuolar iron transporter (VIT) family protein
Chr3_+_9174398 1.42 AT3G25190.1
AT3G25190
Vacuolar iron transporter (VIT) family protein
Chr5_+_25040540 1.42 AT5G62360.1
AT5G62360
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_+_5705541 1.42 AT3G16770.1
EBP
ethylene-responsive element binding protein
Chr1_-_4845847 1.41 AT1G14170.2
AT1G14170.1
AT1G14170.3
AT1G14170
RNA-binding KH domain-containing protein
Chr1_-_3167924 1.41 AT1G09780.1
iPGAM1
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
Chr1_-_4651549 1.41 AT1G13600.1
bZIP58
basic leucine-zipper 58
Chr3_+_9475350 1.40 AT3G25890.2
AT3G25890.1
CRF11
Integrase-type DNA-binding superfamily protein
Chr5_+_903470 1.39 AT5G03570.1
AT5G03570.3
IREG2
iron regulated 2
Chr5_-_10070899 1.38 AT5G28060.1
AT5G28060
Ribosomal protein S24e family protein
Chr3_-_23046153 1.38 AT3G62270.1
AT3G62270
HCO3- transporter family
Chr4_-_9844290 1.38 AT4G17680.3
AT4G17680.2
AT4G17680.1
AT4G17680
SBP (S-ribonuclease binding protein) family protein
Chr1_+_7785708 1.38 AT1G22065.1
AT1G22065
hypothetical protein
Chr4_+_8839256 1.38 AT4G15450.1
AT4G15450.2
AT4G15450
Senescence/dehydration-associated protein-like protein
Chr3_+_20991280 1.37 AT3G56680.1
AT3G56680
Single-stranded nucleic acid binding R3H protein
Chr3_+_11810726 1.37 AT3G30180.1
BR6OX2
brassinosteroid-6-oxidase 2
Chr5_-_21992812 1.37 AT5G54190.2
AT5G54190.1
PORA
protochlorophyllide oxidoreductase A
Chr1_+_25508639 1.36 AT1G68050.1
FKF1
flavin-binding, kelch repeat, f box 1
Chr5_+_2657054 1.36 AT5G08260.1
scpl35
serine carboxypeptidase-like 35
Chr5_-_7385833 1.34 AT5G22310.1
AT5G22310
trichohyalin-like protein
Chr2_+_1993038 1.34 AT2G05440.2
AT2G05440.9
AT2G05440.5
AT2G05440.1
AT2G05440.6
AT2G05440.3
AT2G05440.4
AT2G05440.8
AT2G05440.7
GRP9
GLYCINE RICH PROTEIN 9
Chr1_-_12224000 1.34 AT1G33720.5
AT1G33720.1
AT1G33720.3
AT1G33720.2
AT1G33720.4
CYP76C6
cytochrome P450, family 76, subfamily C, polypeptide 6
Chr4_-_16080721 1.34 AT4G33400.1
AT4G33400
Vacuolar import/degradation, Vid27-related protein
Chr4_+_16542242 1.34 AT4G34650.1
SQS2
squalene synthase 2
Chr4_+_12827856 1.33 AT4G24960.1
AT4G24960.3
AT4G24960.2
HVA22D
HVA22 homologue D
Chr1_-_11719988 1.33 AT1G32450.1
NRT1.5
nitrate transporter 1.5
Chr1_+_18198227 1.33 AT1G49200.1
AT1G49200
RING/U-box superfamily protein
Chr2_-_856725 1.32 AT2G02950.1
PKS1
phytochrome kinase substrate 1
Chr1_+_29356346 1.32 AT1G78070.2
AT1G78070.3
AT1G78070
Transducin/WD40 repeat-like superfamily protein
Chr5_+_8687188 1.32 AT5G25160.1
ZFP3
zinc finger protein 3
Chr1_-_27755297 1.31 AT1G73810.1
AT1G73810
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr1_-_4398193 1.31 AT1G12920.1
ERF1-2
eukaryotic release factor 1-2
Chr4_-_6479165 1.30 AT4G10480.2
AT4G10480.1
AT4G10480
Nascent polypeptide-associated complex (NAC), alpha subunit family protein
Chr5_+_18791575 1.30 AT5G46330.1
AT5G46330.2
FLS2
Leucine-rich receptor-like protein kinase family protein
Chr5_+_25328119 1.30 AT5G63140.1
PAP29
purple acid phosphatase 29
Chr5_+_2563366 1.30 AT5G08000.1
AT5G08000.2
E13L3
glucan endo-1,3-beta-glucosidase-like protein 3
Chr3_-_19078955 1.30 AT3G51400.1
AT3G51400
hypothetical protein (DUF241)
Chr1_-_23716170 1.29 AT1G63880.2
AT1G63880.1
AT1G63880
Disease resistance protein (TIR-NBS-LRR class) family
Chr3_+_2946239 1.29 AT3G09600.1
AT3G09600.2
AT3G09600.4
AT3G09600.3
AT3G09600.7
AT3G09600.6
AT3G09600.5
AT3G09600.8
AT3G09600.9
RVE8
Homeodomain-like superfamily protein
Chr1_+_4647815 1.29 AT1G13590.1
PSK1
phytosulfokine 1 precursor
Chr4_+_16130593 1.29 AT4G33540.1
AT4G33540.2
AT4G33540
metallo-beta-lactamase family protein
Chr5_+_21020014 1.28 AT5G51750.1
SBT1.3
subtilase 1.3
Chr1_+_17847042 1.28 AT1G48300.1
DGAT3
diacylglycerol acyltransferase
Chr5_-_1994824 1.28 AT5G06530.2
AT5G06530.3
AT5G06530.4
AT5G06530.1
ABCG22
ABC-2 type transporter family protein
Chr4_-_11313709 1.28 AT4G21215.1
AT4G21215.2
AT4G21215
transmembrane protein
Chr4_-_5456100 1.28 AT4G08570.1
AT4G08570
Heavy metal transport/detoxification superfamily protein
Chr2_-_15599951 1.28 AT2G37130.2
AT2G37130
Peroxidase superfamily protein
Chr4_-_17687105 1.27 AT4G37640.1
ACA2
calcium ATPase 2
Chr5_-_7654835 1.26 AT5G22890.1
AT5G22890
C2H2 and C2HC zinc fingers superfamily protein
Chr5_-_2697724 1.26 AT5G08380.2
AT5G08380.1
AGAL1
alpha-galactosidase 1
Chr4_-_16631339 1.26 AT4G34900.3
AT4G34900.2
AT4G34900.1
XDH2
xanthine dehydrogenase 2
Chr4_-_810574 1.25 AT4G01870.1
AT4G01870.2
AT4G01870
tolB protein-like protein
Chr5_+_18398832 1.25 AT5G45400.1
RPA70C
Replication factor-A protein 1-like protein
Chr3_-_19139423 1.25 AT3G51600.1
LTP5
lipid transfer protein 5
Chr3_+_4403355 1.24 AT3G13510.1
AT3G13510
carboxyl-terminal peptidase, putative (DUF239)
Chr3_+_2907479 1.24 AT3G09450.1
AT3G09450
fusaric acid resistance family protein
Chr4_-_16347364 1.24 AT4G34135.1
AT4G34135.2
UGT73B2
UDP-glucosyltransferase 73B2
Chr5_+_9033204 1.24 AT5G25890.1
IAA28
indole-3-acetic acid inducible 28
Chr1_+_25999837 1.23 AT1G69160.1
AT1G69160
suppressor
Chr3_+_3776177 1.23 AT3G11930.2
AT3G11930.3
AT3G11930.1
AT3G11930.4
AT3G11930
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr2_-_15600154 1.23 AT2G37130.1
AT2G37130
Peroxidase superfamily protein
Chr1_+_29759030 1.23 AT1G79110.2
AT1G79110.3
AT1G79110.1
BRG2
zinc ion binding protein
Chr2_+_6761635 1.22 AT2G15490.2
AT2G15490.3
AT2G15490.1
UGT73B4
UDP-glycosyltransferase 73B4
Chr1_-_11079240 1.22 AT1G31050.8
AT1G31050.7
AT1G31050.4
AT1G31050.6
AT1G31050.5
AT1G31050.3
AT1G31050.2
AT1G31050.1
AT1G31050
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_-_22936084 1.22 AT5G56670.1
AT5G56670
Ribosomal protein S30 family protein
Chr1_-_30142697 1.22 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_1225919 1.22 AT3G04550.1
AT3G04550
rubisco accumulation factor-like protein
Chr3_-_1652149 1.22 AT3G05660.1
RLP33
receptor like protein 33
Chr2_-_19287590 1.21 AT2G46940.1
AT2G46940
fold protein
Chr5_+_6673874 1.21 AT5G19740.1
AT5G19740
Peptidase M28 family protein
Chr1_+_29354944 1.21 AT1G78070.1
AT1G78070
Transducin/WD40 repeat-like superfamily protein
Chr4_+_5244865 1.20 AT4G08300.1
UMAMIT17
nodulin MtN21 /EamA-like transporter family protein
Chr1_+_18305445 1.20 AT1G49450.1
AT1G49450
Transducin/WD40 repeat-like superfamily protein
Chr4_-_9935685 1.20 AT4G17880.1
MYC4
Basic helix-loop-helix (bHLH) DNA-binding family protein
Chr3_-_1624819 1.20 AT3G05600.2
AT3G05600.1
AT3G05600
alpha/beta-Hydrolases superfamily protein
Chr3_+_22635803 1.19 AT3G61160.3
AT3G61160.6
AT3G61160.5
AT3G61160.4
AT3G61160.2
AT3G61160.1
AT3G61160
Protein kinase superfamily protein
Chr3_+_8480025 1.19 AT3G23620.1
AT3G23620
Ribosomal RNA processing Brix domain protein
Chr3_+_673428 1.19 AT3G02990.1
HSFA1E
heat shock transcription factor A1E
Chr4_-_2429899 1.19 AT4G04770.1
ABCI8
ATP binding cassette protein 1
Chr5_-_16634012 1.19 AT5G41590.1
AT5G41590
LURP-one-like protein (DUF567)
Chr3_+_1024144 1.19 AT3G03960.1
AT3G03960
TCP-1/cpn60 chaperonin family protein
Chr1_-_25758411 1.19 AT1G68590.1
PSRP3/1
Ribosomal protein PSRP-3/Ycf65
Chr4_+_16543154 1.18 AT4G34650.2
SQS2
squalene synthase 2
Chr1_-_25758232 1.18 AT1G68590.2
PSRP3/1
Ribosomal protein PSRP-3/Ycf65
Chr1_-_156178 1.18 AT1G01420.2
UGT72B3
UDP-glucosyl transferase 72B3
Chr2_-_14746124 1.18 AT2G34960.1
CAT5
cationic amino acid transporter 5
Chr1_-_29034822 1.17 AT1G77280.2
AT1G77280.1
AT1G77280
kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
Chr4_-_12180936 1.17 AT4G23290.2
AT4G23290.1
CRK21
cysteine-rich RLK (RECEPTOR-like protein kinase) 21
Chr3_+_17427950 1.17 AT3G47295.1
AT3G47295
hypothetical protein
Chr3_+_16138375 1.17 AT3G44550.2
FAR5
fatty acid reductase 5
Chr1_-_156011 1.17 AT1G01420.1
UGT72B3
UDP-glucosyl transferase 72B3
Chr1_+_10996870 1.17 AT1G30900.1
VSR6
VACUOLAR SORTING RECEPTOR 6
Chr5_+_21401312 1.17 AT5G52820.1
AT5G52820
WD-40 repeat family protein / notchless protein
Chr5_-_1742161 1.17 AT5G05790.2
AT5G05790.1
AT5G05790
Duplicated homeodomain-like superfamily protein
Chr1_-_8414886 1.17 AT1G23800.1
AT1G23800.2
ALDH2B7
aldehyde dehydrogenase 2B7
Chr5_-_18899646 1.16 AT5G46580.1
AT5G46580
pentatricopeptide (PPR) repeat-containing protein
Chr4_+_13074090 1.16 AT4G25630.1
FIB2
fibrillarin 2
Chr3_-_17506124 1.16 AT3G47500.1
CDF3
cycling DOF factor 3
Chr5_+_904693 1.16 AT5G03570.4
IREG2
iron regulated 2
Chr5_+_6687030 1.15 AT5G19780.1
TUA5
tubulin alpha-5
Chr5_-_2951701 1.15 AT5G09480.1
AT5G09480
hydroxyproline-rich glycoprotein family protein
Chr4_+_8646150 1.15 AT4G15160.2
AT4G15160.1
AT4G15160
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_22317070 1.15 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr4_-_18370698 1.15 AT4G39510.1
CYP96A12
cytochrome P450, family 96, subfamily A, polypeptide 12
Chr1_+_18400003 1.15 AT1G49720.1
AT1G49720.2
AT1G49720.3
ABF1
abscisic acid responsive element-binding factor 1
Chr1_+_13225168 1.14 AT1G35720.1
ANNAT1
annexin 1
Chr4_+_16131373 1.14 AT4G33540.3
AT4G33540
metallo-beta-lactamase family protein
Chr1_+_23328727 1.14 AT1G62975.2
AT1G62975.1
AT1G62975
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr3_+_3942257 1.14 AT3G12390.1
AT3G12390
Nascent polypeptide-associated complex (NAC), alpha subunit family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G12720

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.7 6.7 GO:0015675 nickel cation transport(GO:0015675)
1.6 9.5 GO:0009413 response to flooding(GO:0009413)
1.4 4.3 GO:0071281 cellular response to iron ion(GO:0071281)
0.7 3.6 GO:0009647 skotomorphogenesis(GO:0009647)
0.7 2.1 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.7 1.4 GO:0019320 hexose catabolic process(GO:0019320)
0.7 2.1 GO:0015696 ammonium transport(GO:0015696)
0.6 1.9 GO:0032490 detection of molecule of bacterial origin(GO:0032490)
0.6 1.8 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424)
0.6 2.4 GO:0033306 phytol metabolic process(GO:0033306)
0.6 1.7 GO:0015800 acidic amino acid transport(GO:0015800)
0.6 1.7 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.6 0.6 GO:0042407 cristae formation(GO:0042407)
0.5 1.6 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.5 3.1 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.5 1.0 GO:0016553 base conversion or substitution editing(GO:0016553) cytidine to uridine editing(GO:0016554)
0.5 1.5 GO:1990532 stress response to nickel ion(GO:1990532)
0.5 2.0 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.5 1.4 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.5 1.4 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.5 2.3 GO:0000729 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.5 0.5 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.5 2.3 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.5 3.2 GO:0043090 amino acid import(GO:0043090)
0.4 1.3 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
0.4 1.3 GO:0018065 protein-cofactor linkage(GO:0018065)
0.4 6.1 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.4 1.3 GO:0071485 cellular response to absence of light(GO:0071485)
0.4 1.7 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.4 1.3 GO:0090547 response to low humidity(GO:0090547)
0.4 3.0 GO:0009803 cinnamic acid metabolic process(GO:0009803)
0.4 0.8 GO:0006968 cellular defense response(GO:0006968)
0.4 2.9 GO:1904481 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.4 0.4 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.4 2.0 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.4 2.4 GO:0031112 positive regulation of microtubule polymerization or depolymerization(GO:0031112)
0.4 1.6 GO:0042144 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144)
0.4 1.2 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.4 2.0 GO:1901562 response to paraquat(GO:1901562)
0.4 1.6 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.4 1.2 GO:0010024 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.4 2.0 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.4 1.6 GO:0006423 cysteinyl-tRNA aminoacylation(GO:0006423)
0.4 1.2 GO:0018364 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.4 3.4 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.4 1.1 GO:0043132 NAD transport(GO:0043132)
0.4 1.1 GO:0051298 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.4 0.8 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.4 14.4 GO:0055072 iron ion homeostasis(GO:0055072)
0.4 1.1 GO:0016237 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.4 1.9 GO:0060919 auxin influx(GO:0060919)
0.4 1.9 GO:0005980 glycogen catabolic process(GO:0005980)
0.4 2.3 GO:0043478 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.4 0.7 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.4 0.4 GO:0075733 intracellular transport of virus(GO:0075733)
0.4 1.1 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.4 1.5 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.4 0.7 GO:0031055 chromatin remodeling at centromere(GO:0031055)
0.4 1.5 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.4 3.3 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.3 0.7 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.3 1.4 GO:0019499 cyanide metabolic process(GO:0019499)
0.3 1.0 GO:0098532 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.3 0.7 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.3 1.0 GO:1902326 positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.3 0.7 GO:1900151 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.3 3.4 GO:0050879 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.3 1.0 GO:0010028 xanthophyll cycle(GO:0010028)
0.3 1.3 GO:0042256 mature ribosome assembly(GO:0042256)
0.3 1.0 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.3 1.0 GO:0009663 plasmodesma organization(GO:0009663)
0.3 2.3 GO:0045898 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.3 1.0 GO:0048451 petal formation(GO:0048451)
0.3 0.3 GO:0080182 histone H3-K4 trimethylation(GO:0080182)
0.3 1.9 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.3 1.0 GO:0042353 fucose biosynthetic process(GO:0042353)
0.3 2.5 GO:0061727 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.3 1.0 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.3 1.9 GO:0048439 flower morphogenesis(GO:0048439)
0.3 0.9 GO:1900032 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.3 0.9 GO:0033259 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.3 3.1 GO:0009942 longitudinal axis specification(GO:0009942)
0.3 0.6 GO:0010376 stomatal complex formation(GO:0010376)
0.3 1.2 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.3 0.9 GO:0019594 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.3 0.9 GO:0030974 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.3 0.9 GO:0071763 nuclear membrane organization(GO:0071763)
0.3 0.9 GO:2000736 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.3 0.9 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.3 1.5 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.3 2.4 GO:1902299 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.3 0.9 GO:0009660 amyloplast organization(GO:0009660)
0.3 0.9 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.3 0.3 GO:0007164 establishment of tissue polarity(GO:0007164)
0.3 1.8 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.3 2.1 GO:0010148 transpiration(GO:0010148)
0.3 5.3 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.3 2.4 GO:0009819 drought recovery(GO:0009819)
0.3 2.1 GO:0090059 protoxylem development(GO:0090059)
0.3 0.9 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.3 1.4 GO:0008608 attachment of spindle microtubules to kinetochore(GO:0008608)
0.3 1.4 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.3 0.9 GO:1990882 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.3 0.9 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.3 0.3 GO:0080093 regulation of photorespiration(GO:0080093)
0.3 0.9 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
0.3 0.9 GO:1904062 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.3 1.1 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.3 0.9 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.3 2.6 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.3 1.7 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.3 1.1 GO:0031538 negative regulation of anthocyanin metabolic process(GO:0031538)
0.3 1.1 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.3 0.8 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.3 0.8 GO:0035246 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) histone arginine methylation(GO:0034969) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.3 1.6 GO:0097502 mannosylation(GO:0097502)
0.3 8.3 GO:0006012 galactose metabolic process(GO:0006012)
0.3 1.3 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.3 1.6 GO:0046500 S-adenosylmethionine metabolic process(GO:0046500)
0.3 1.1 GO:0010480 microsporocyte differentiation(GO:0010480)
0.3 1.3 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system(GO:0010201)
0.3 0.5 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.3 0.5 GO:0048207 vesicle targeting, rough ER to cis-Golgi(GO:0048207) COPII vesicle coating(GO:0048208)
0.3 0.8 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.3 4.0 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.3 0.5 GO:0010288 response to lead ion(GO:0010288)
0.3 0.5 GO:0097576 vacuole fusion(GO:0097576)
0.3 0.5 GO:0015802 basic amino acid transport(GO:0015802)
0.3 0.8 GO:0031054 pre-miRNA processing(GO:0031054)
0.3 1.8 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.3 1.0 GO:0072351 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.3 1.5 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.2 0.7 GO:0009093 cysteine catabolic process(GO:0009093)
0.2 0.5 GO:0043271 negative regulation of ion transport(GO:0043271)
0.2 1.5 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.2 0.7 GO:0009662 etioplast organization(GO:0009662)
0.2 1.5 GO:1904961 quiescent center organization(GO:1904961)
0.2 2.2 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.2 2.9 GO:0031053 primary miRNA processing(GO:0031053)
0.2 9.3 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.2 1.0 GO:0051512 positive regulation of unidimensional cell growth(GO:0051512)
0.2 1.5 GO:0010338 leaf formation(GO:0010338)
0.2 2.2 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.2 1.0 GO:0006023 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.2 0.2 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.2 1.4 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.2 2.1 GO:0060866 leaf abscission(GO:0060866)
0.2 5.2 GO:0009638 phototropism(GO:0009638)
0.2 0.7 GO:0044277 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.2 0.7 GO:0071569 protein ufmylation(GO:0071569)
0.2 2.1 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.2 0.9 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056)
0.2 2.1 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.2 0.9 GO:0031297 replication fork processing(GO:0031297)
0.2 1.4 GO:0010036 response to boron-containing substance(GO:0010036)
0.2 0.5 GO:0009590 detection of gravity(GO:0009590)
0.2 0.9 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 1.2 GO:0000972 transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000972)
0.2 0.9 GO:0010507 negative regulation of autophagy(GO:0010507)
0.2 3.7 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.2 1.6 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.2 1.1 GO:0035627 ceramide transport(GO:0035627)
0.2 0.5 GO:0034724 DNA replication-independent nucleosome organization(GO:0034724)
0.2 1.1 GO:0042350 GDP-L-fucose biosynthetic process(GO:0042350) GDP-L-fucose metabolic process(GO:0046368)
0.2 1.1 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.2 3.4 GO:0019856 pyrimidine nucleobase biosynthetic process(GO:0019856)
0.2 0.9 GO:0001578 microtubule bundle formation(GO:0001578)
0.2 0.7 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.2 0.4 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.2 0.4 GO:0051415 interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)
0.2 0.9 GO:0016598 protein arginylation(GO:0016598)
0.2 0.9 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.2 0.2 GO:0070601 centromeric sister chromatid cohesion(GO:0070601)
0.2 4.9 GO:0031647 regulation of protein stability(GO:0031647)
0.2 0.4 GO:0051653 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.2 4.3 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.2 1.7 GO:0043489 RNA stabilization(GO:0043489)
0.2 0.4 GO:0061014 regulation of mRNA catabolic process(GO:0061013) positive regulation of mRNA catabolic process(GO:0061014)
0.2 0.8 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.2 1.1 GO:0033753 ribosomal subunit export from nucleus(GO:0000054) ribosome localization(GO:0033750) establishment of ribosome localization(GO:0033753) rRNA-containing ribonucleoprotein complex export from nucleus(GO:0071428)
0.2 6.4 GO:0010143 cutin biosynthetic process(GO:0010143)
0.2 1.0 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.2 2.6 GO:0043248 proteasome assembly(GO:0043248)
0.2 1.8 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.2 0.4 GO:0009193 UDP biosynthetic process(GO:0006225) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine ribonucleoside diphosphate metabolic process(GO:0009193) pyrimidine ribonucleoside diphosphate biosynthetic process(GO:0009194) UDP metabolic process(GO:0046048)
0.2 11.0 GO:0002181 cytoplasmic translation(GO:0002181)
0.2 1.2 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.2 0.6 GO:0070207 protein homotrimerization(GO:0070207)
0.2 0.6 GO:0043181 vacuolar sequestering(GO:0043181)
0.2 1.8 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.2 0.6 GO:0048358 mucilage pectin biosynthetic process(GO:0048358)
0.2 1.0 GO:0010315 auxin efflux(GO:0010315)
0.2 1.0 GO:0060261 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.2 0.8 GO:0009557 antipodal cell differentiation(GO:0009557)
0.2 0.8 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.2 1.0 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.2 0.8 GO:0000480 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000472) endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000480)
0.2 2.5 GO:0051050 positive regulation of transport(GO:0051050)
0.2 7.7 GO:0040034 regulation of development, heterochronic(GO:0040034)
0.2 2.3 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.2 0.6 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.2 0.6 GO:0051098 regulation of binding(GO:0051098)
0.2 0.6 GO:0071494 cellular response to UV-C(GO:0071494)
0.2 1.7 GO:0006168 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.2 0.9 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.2 0.8 GO:0019377 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.2 4.9 GO:0006730 one-carbon metabolic process(GO:0006730)
0.2 0.2 GO:0001887 selenium compound metabolic process(GO:0001887)
0.2 2.2 GO:0001522 pseudouridine synthesis(GO:0001522)
0.2 0.7 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.2 0.9 GO:0000919 cell plate assembly(GO:0000919)
0.2 1.8 GO:0009088 threonine biosynthetic process(GO:0009088)
0.2 1.8 GO:0008214 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.2 0.5 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.2 1.1 GO:0006013 mannose metabolic process(GO:0006013)
0.2 4.0 GO:0051085 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.2 0.5 GO:0009915 phloem sucrose loading(GO:0009915)
0.2 1.8 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.2 0.2 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.2 3.6 GO:0000373 Group II intron splicing(GO:0000373)
0.2 0.4 GO:0010541 acropetal auxin transport(GO:0010541)
0.2 2.1 GO:0031425 chloroplast RNA processing(GO:0031425)
0.2 2.5 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.2 2.5 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.2 0.4 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.2 0.7 GO:0034389 lipid particle organization(GO:0034389)
0.2 0.7 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.2 1.7 GO:1901070 guanosine-containing compound biosynthetic process(GO:1901070)
0.2 3.1 GO:0071545 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.2 0.9 GO:0007142 male meiosis II(GO:0007142)
0.2 1.4 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.2 1.3 GO:0006308 DNA catabolic process(GO:0006308)
0.2 2.0 GO:0006265 DNA topological change(GO:0006265)
0.2 4.9 GO:0042026 protein refolding(GO:0042026)
0.2 0.2 GO:0002833 positive regulation of response to biotic stimulus(GO:0002833) positive regulation of defense response to oomycetes(GO:1902290)
0.2 2.0 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.2 0.8 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.2 1.3 GO:0010540 basipetal auxin transport(GO:0010540)
0.2 0.8 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.2 0.3 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.2 1.0 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.2 0.5 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.2 0.5 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.2 0.6 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.2 0.5 GO:0045981 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) regulation of ATP metabolic process(GO:1903578) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.2 0.8 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.2 0.5 GO:0071486 cellular response to high light intensity(GO:0071486)
0.2 2.8 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.2 0.5 GO:0072698 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.2 0.5 GO:0007569 cell aging(GO:0007569)
0.2 0.9 GO:0019509 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.2 0.5 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.2 0.2 GO:0036115 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.2 1.2 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.2 0.5 GO:0051639 actin filament network formation(GO:0051639)
0.2 1.7 GO:0032544 plastid translation(GO:0032544)
0.2 0.6 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.1 1.5 GO:0017183 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 0.4 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.1 0.1 GO:0000492 box C/D snoRNP assembly(GO:0000492)
0.1 2.8 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 0.4 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.1 0.6 GO:0017157 regulation of exocytosis(GO:0017157)
0.1 0.9 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.1 1.8 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.1 1.9 GO:0052325 cell wall pectin biosynthetic process(GO:0052325)
0.1 2.2 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.1 1.6 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.1 0.1 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.1 0.6 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.1 4.2 GO:0016556 mRNA modification(GO:0016556)
0.1 0.9 GO:0006145 purine nucleobase catabolic process(GO:0006145)
0.1 1.4 GO:0050665 hydrogen peroxide biosynthetic process(GO:0050665)
0.1 0.6 GO:1901601 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.1 2.4 GO:0061572 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.1 2.3 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.1 0.9 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.1 0.4 GO:0048872 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.1 1.1 GO:0006144 purine nucleobase metabolic process(GO:0006144)
0.1 0.6 GO:0019477 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.1 0.6 GO:0046039 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) GTP metabolic process(GO:0046039) prosthetic group metabolic process(GO:0051189)
0.1 1.8 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.1 2.0 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.1 0.4 GO:0080058 protein deglutathionylation(GO:0080058)
0.1 0.3 GO:0031998 regulation of fatty acid beta-oxidation(GO:0031998) positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
0.1 0.8 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.1 1.7 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.1 0.4 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.1 9.6 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.1 3.5 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.1 1.6 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.1 GO:1900864 mitochondrial RNA modification(GO:1900864)
0.1 0.8 GO:0007097 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023) nucleus localization(GO:0051647)
0.1 1.2 GO:0010230 alternative respiration(GO:0010230)
0.1 0.8 GO:0080120 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.1 0.1 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.1 0.9 GO:0015695 organic cation transport(GO:0015695)
0.1 0.1 GO:1903335 regulation of vacuolar transport(GO:1903335)
0.1 4.8 GO:0043038 amino acid activation(GO:0043038) tRNA aminoacylation(GO:0043039)
0.1 1.1 GO:0032456 endocytic recycling(GO:0032456)
0.1 0.4 GO:0071481 cellular response to X-ray(GO:0071481)
0.1 5.1 GO:0006099 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.1 0.7 GO:0008333 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.1 0.9 GO:0032781 positive regulation of ATPase activity(GO:0032781)
0.1 1.4 GO:0000959 mitochondrial RNA metabolic process(GO:0000959)
0.1 0.5 GO:0060149 negative regulation of posttranscriptional gene silencing(GO:0060149)
0.1 0.5 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.1 0.8 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.1 2.6 GO:0051781 positive regulation of cell division(GO:0051781)
0.1 0.3 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.1 0.9 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 0.3 GO:0048480 stigma development(GO:0048480)
0.1 0.4 GO:0010045 response to nickel cation(GO:0010045)
0.1 0.4 GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process(GO:2001009)
0.1 0.9 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.1 0.4 GO:0009204 deoxyribonucleoside triphosphate catabolic process(GO:0009204) deoxyribose phosphate catabolic process(GO:0046386)
0.1 0.4 GO:0048530 fruit morphogenesis(GO:0048530)
0.1 0.8 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.1 0.5 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.1 3.6 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.1 0.9 GO:0019632 shikimate metabolic process(GO:0019632)
0.1 2.2 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.1 0.5 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.1 0.5 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 0.9 GO:0016584 nucleosome positioning(GO:0016584)
0.1 1.2 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.1 1.5 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 0.6 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.1 0.5 GO:0043981 histone H4-K5 acetylation(GO:0043981)
0.1 1.9 GO:0072506 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.1 0.4 GO:0043987 histone-serine phosphorylation(GO:0035404) histone H3-S10 phosphorylation(GO:0043987)
0.1 0.6 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.1 0.1 GO:0051569 regulation of histone H3-K4 methylation(GO:0051569)
0.1 0.1 GO:1902292 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.1 1.0 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.1 0.2 GO:0045332 phospholipid translocation(GO:0045332)
0.1 0.6 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.1 3.3 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.1 0.7 GO:0010067 procambium histogenesis(GO:0010067)
0.1 0.3 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.1 0.8 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.1 1.1 GO:1990937 xylan acetylation(GO:1990937)
0.1 0.8 GO:0010039 response to iron ion(GO:0010039)
0.1 0.3 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.1 1.0 GO:0010332 response to gamma radiation(GO:0010332)
0.1 0.4 GO:0044843 G1/S transition of mitotic cell cycle(GO:0000082) cell cycle G1/S phase transition(GO:0044843)
0.1 0.6 GO:0006379 mRNA cleavage(GO:0006379)
0.1 0.2 GO:0048863 stem cell differentiation(GO:0048863)
0.1 0.3 GO:0019483 uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483) uracil metabolic process(GO:0019860)
0.1 0.4 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.1 0.4 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.1 0.2 GO:0072526 pyridine-containing compound catabolic process(GO:0072526)
0.1 0.5 GO:0006264 mitochondrial DNA replication(GO:0006264)
0.1 1.2 GO:0048317 seed morphogenesis(GO:0048317)
0.1 0.6 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.1 0.1 GO:0048478 replication fork protection(GO:0048478)
0.1 2.5 GO:0002213 defense response to insect(GO:0002213)
0.1 0.8 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 3.7 GO:0010043 response to zinc ion(GO:0010043)
0.1 0.2 GO:0010054 trichoblast differentiation(GO:0010054)
0.1 0.9 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.1 2.7 GO:0042255 ribosome assembly(GO:0042255)
0.1 0.9 GO:0007105 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.1 0.3 GO:0044088 regulation of vacuole organization(GO:0044088)
0.1 0.7 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.1 0.5 GO:0015940 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.1 0.4 GO:0035308 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.1 0.5 GO:0060148 positive regulation of posttranscriptional gene silencing(GO:0060148)
0.1 0.7 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.1 0.3 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.1 0.2 GO:1901672 positive regulation of systemic acquired resistance(GO:1901672)
0.1 0.1 GO:0043605 cellular amide catabolic process(GO:0043605)
0.1 0.4 GO:1900458 negative regulation of brassinosteroid mediated signaling pathway(GO:1900458)
0.1 0.3 GO:0080051 cutin transport(GO:0080051)
0.1 0.2 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.1 0.1 GO:0015074 DNA integration(GO:0015074)
0.1 0.7 GO:1903322 positive regulation of protein modification by small protein conjugation or removal(GO:1903322)
0.1 0.3 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 4.1 GO:0072666 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.1 0.7 GO:0010222 stem vascular tissue pattern formation(GO:0010222)
0.1 0.7 GO:0046085 adenosine metabolic process(GO:0046085)
0.1 0.9 GO:0034312 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.1 0.3 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.1 0.4 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.1 0.3 GO:0046838 phosphorylated carbohydrate dephosphorylation(GO:0046838)
0.1 1.7 GO:0051260 protein homooligomerization(GO:0051260)
0.1 0.3 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.1 0.5 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.1 3.1 GO:0006897 endocytosis(GO:0006897)
0.1 0.6 GO:0032973 amino acid export(GO:0032973)
0.1 0.4 GO:0006882 cellular zinc ion homeostasis(GO:0006882)
0.1 0.4 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.1 3.3 GO:0006413 translational initiation(GO:0006413)
0.1 1.8 GO:0016109 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.1 0.4 GO:0045910 negative regulation of DNA recombination(GO:0045910)
0.1 0.2 GO:0031087 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay(GO:0031086) deadenylation-independent decapping of nuclear-transcribed mRNA(GO:0031087)
0.1 0.9 GO:0010088 phloem development(GO:0010088)
0.1 0.2 GO:0010219 regulation of vernalization response(GO:0010219)
0.1 0.5 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.1 0.4 GO:0006549 isoleucine metabolic process(GO:0006549) isoleucine biosynthetic process(GO:0009097)
0.1 0.2 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.1 0.4 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.1 0.6 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 0.3 GO:0010483 pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.1 2.1 GO:0009395 phospholipid catabolic process(GO:0009395)
0.1 0.3 GO:0050992 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.1 0.5 GO:0016926 protein desumoylation(GO:0016926)
0.1 0.3 GO:0035494 SNARE complex disassembly(GO:0035494)
0.1 0.2 GO:0048209 regulation of vesicle targeting, to, from or within Golgi(GO:0048209)
0.1 1.7 GO:0010167 response to nitrate(GO:0010167)
0.1 1.3 GO:0051028 mRNA transport(GO:0051028)
0.1 1.5 GO:0055070 copper ion homeostasis(GO:0055070)
0.1 0.1 GO:0019184 glutathione biosynthetic process(GO:0006750) nonribosomal peptide biosynthetic process(GO:0019184)
0.1 1.2 GO:1902074 response to salt(GO:1902074)
0.1 1.3 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 0.2 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.1 2.2 GO:0071472 cellular response to salt stress(GO:0071472)
0.1 0.3 GO:0018196 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.1 0.4 GO:0009827 plant-type cell wall modification(GO:0009827)
0.1 0.3 GO:0070301 cellular response to hydrogen peroxide(GO:0070301)
0.1 0.4 GO:1900908 regulation of ethylene biosynthetic process(GO:0010364) regulation of sulfur amino acid metabolic process(GO:0031335) regulation of olefin metabolic process(GO:1900908) regulation of olefin biosynthetic process(GO:1900911)
0.1 2.5 GO:0006476 protein deacetylation(GO:0006476)
0.1 2.3 GO:0006414 translational elongation(GO:0006414)
0.1 0.6 GO:0044375 regulation of peroxisome size(GO:0044375)
0.1 4.1 GO:0009631 cold acclimation(GO:0009631)
0.1 0.2 GO:0031396 regulation of protein ubiquitination(GO:0031396) regulation of protein modification by small protein conjugation or removal(GO:1903320)
0.1 0.8 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1 0.3 GO:0032877 positive regulation of DNA endoreduplication(GO:0032877) positive regulation of DNA-dependent DNA replication(GO:2000105)
0.1 0.2 GO:0080117 secondary growth(GO:0080117)
0.1 0.5 GO:0042816 vitamin B6 metabolic process(GO:0042816)
0.1 0.2 GO:0051211 anisotropic cell growth(GO:0051211)
0.1 0.3 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.1 0.3 GO:0032272 negative regulation of protein polymerization(GO:0032272)
0.1 0.8 GO:0006085 acetyl-CoA biosynthetic process(GO:0006085)
0.1 0.7 GO:0033619 membrane protein proteolysis(GO:0033619)
0.1 1.8 GO:0048768 root hair cell tip growth(GO:0048768)
0.1 1.6 GO:0009269 response to desiccation(GO:0009269)
0.1 2.1 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.1 1.4 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.1 1.7 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.1 1.0 GO:0006303 non-recombinational repair(GO:0000726) double-strand break repair via nonhomologous end joining(GO:0006303)
0.1 0.1 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.1 0.5 GO:0005513 detection of calcium ion(GO:0005513)
0.1 0.2 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.1 0.3 GO:0015669 gas transport(GO:0015669)
0.1 0.4 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.1 0.4 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.1 0.5 GO:0006000 fructose metabolic process(GO:0006000)
0.1 0.4 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.1 17.7 GO:0006412 translation(GO:0006412)
0.1 1.5 GO:0090333 regulation of stomatal closure(GO:0090333)
0.1 1.5 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 0.6 GO:0031221 arabinan metabolic process(GO:0031221)
0.1 0.6 GO:0036297 interstrand cross-link repair(GO:0036297)
0.1 0.3 GO:0015914 phospholipid transport(GO:0015914)
0.1 1.2 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.1 0.2 GO:0009584 detection of visible light(GO:0009584)
0.1 0.2 GO:0071277 cellular response to calcium ion(GO:0071277)
0.1 0.7 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.1 2.9 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.1 0.9 GO:0043650 dicarboxylic acid biosynthetic process(GO:0043650)
0.1 0.1 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 0.5 GO:0006491 N-glycan processing(GO:0006491)
0.1 0.4 GO:0042814 monopolar cell growth(GO:0042814)
0.1 0.3 GO:0000719 photoreactive repair(GO:0000719) pyrimidine dimer repair(GO:0006290)
0.1 1.1 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.1 0.3 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.1 1.3 GO:0045338 farnesyl diphosphate metabolic process(GO:0045338)
0.1 0.3 GO:0010267 production of ta-siRNAs involved in RNA interference(GO:0010267)
0.1 4.8 GO:0018105 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.1 0.6 GO:0009229 thiamine diphosphate biosynthetic process(GO:0009229) thiamine diphosphate metabolic process(GO:0042357)
0.1 0.6 GO:0015865 purine nucleotide transport(GO:0015865)
0.1 0.1 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.1 0.3 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.1 0.4 GO:0080113 regulation of seed growth(GO:0080113)
0.1 1.5 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.1 0.6 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.1 0.2 GO:0090056 regulation of chlorophyll metabolic process(GO:0090056)
0.1 0.2 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.1 0.3 GO:0018874 benzoate metabolic process(GO:0018874)
0.1 3.8 GO:0016579 protein deubiquitination(GO:0016579)
0.1 4.2 GO:0007623 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)
0.1 1.6 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.1 0.2 GO:0071047 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.1 1.1 GO:0010207 photosystem II assembly(GO:0010207)
0.1 0.4 GO:0009218 pyrimidine ribonucleotide metabolic process(GO:0009218) pyrimidine ribonucleotide biosynthetic process(GO:0009220)
0.1 0.1 GO:0016572 histone phosphorylation(GO:0016572)
0.1 3.0 GO:0006972 hyperosmotic response(GO:0006972)
0.1 0.2 GO:0046506 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.1 0.5 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 5.4 GO:0006457 protein folding(GO:0006457)
0.1 0.3 GO:0048587 regulation of short-day photoperiodism, flowering(GO:0048587)
0.1 0.1 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.1 0.2 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.1 0.8 GO:0051782 negative regulation of cell division(GO:0051782)
0.1 3.9 GO:0006261 DNA-dependent DNA replication(GO:0006261)
0.1 0.8 GO:0006388 RNA splicing, via endonucleolytic cleavage and ligation(GO:0000394) tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.1 1.0 GO:0000911 cytokinesis by cell plate formation(GO:0000911)
0.1 0.3 GO:0015846 polyamine transport(GO:0015846)
0.1 0.7 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.1 0.3 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.1 1.1 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.1 0.5 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 0.4 GO:0016072 rRNA metabolic process(GO:0016072)
0.1 0.7 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.1 1.0 GO:0015986 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.1 3.2 GO:0007018 microtubule-based movement(GO:0007018)
0.1 0.1 GO:0015786 UDP-glucose transport(GO:0015786)
0.1 0.1 GO:0080190 lateral growth(GO:0080190)
0.1 0.1 GO:1902583 multi-organism intracellular transport(GO:1902583)
0.1 0.2 GO:1902099 regulation of mitotic metaphase/anaphase transition(GO:0030071) regulation of metaphase/anaphase transition of cell cycle(GO:1902099)
0.1 0.2 GO:0031936 negative regulation of chromatin silencing(GO:0031936)
0.1 0.2 GO:0007292 female gamete generation(GO:0007292)
0.1 1.1 GO:0006401 RNA catabolic process(GO:0006401)
0.1 0.3 GO:0043967 histone H4 acetylation(GO:0043967)
0.0 3.5 GO:0042254 ribosome biogenesis(GO:0042254)
0.0 2.1 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.6 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.0 0.3 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.0 1.8 GO:0006338 chromatin remodeling(GO:0006338)
0.0 0.7 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.0 0.8 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.2 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.0 1.1 GO:0009910 negative regulation of flower development(GO:0009910)
0.0 0.4 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.0 0.3 GO:0097034 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.0 5.8 GO:0009451 RNA modification(GO:0009451)
0.0 0.1 GO:0019627 urea metabolic process(GO:0019627)
0.0 0.1 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.0 0.3 GO:0071333 cellular response to glucose stimulus(GO:0071333)
0.0 0.4 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.0 0.1 GO:1990641 response to iron ion starvation(GO:1990641)
0.0 0.9 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.8 GO:0007006 mitochondrial membrane organization(GO:0007006)
0.0 0.7 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.0 0.1 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.0 0.3 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.2 GO:0048359 mucilage metabolic process involved in seed coat development(GO:0048359)
0.0 0.2 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.0 0.0 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.0 0.2 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.4 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 2.2 GO:0048765 trichoblast maturation(GO:0048764) root hair cell differentiation(GO:0048765)
0.0 0.6 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.6 GO:0009098 leucine biosynthetic process(GO:0009098)
0.0 0.3 GO:0048564 photosystem I assembly(GO:0048564)
0.0 1.9 GO:0006875 cellular metal ion homeostasis(GO:0006875)
0.0 0.5 GO:0010274 hydrotropism(GO:0010274)
0.0 0.5 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.8 GO:0034728 nucleosome organization(GO:0034728)
0.0 0.3 GO:0052541 plant-type cell wall cellulose biosynthetic process(GO:0052324) plant-type cell wall cellulose metabolic process(GO:0052541)
0.0 1.1 GO:0006887 exocytosis(GO:0006887)
0.0 3.6 GO:0046777 protein autophosphorylation(GO:0046777)
0.0 0.3 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.0 0.4 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.3 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.0 0.4 GO:0010082 regulation of root meristem growth(GO:0010082)
0.0 1.1 GO:0009247 glycolipid biosynthetic process(GO:0009247)
0.0 0.1 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.0 0.0 GO:0010447 response to acidic pH(GO:0010447)
0.0 0.3 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.4 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.0 GO:0051205 protein insertion into membrane(GO:0051205)
0.0 0.1 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.0 0.3 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.0 1.2 GO:0042176 regulation of protein catabolic process(GO:0042176)
0.0 4.9 GO:0046686 response to cadmium ion(GO:0046686)
0.0 0.2 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.6 GO:0019750 chloroplast relocation(GO:0009902) chloroplast localization(GO:0019750) plastid localization(GO:0051644) establishment of plastid localization(GO:0051667)
0.0 0.6 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.6 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.9 GO:0006612 protein targeting to membrane(GO:0006612)
0.0 0.0 GO:0010048 vernalization response(GO:0010048)
0.0 0.1 GO:0006560 proline metabolic process(GO:0006560)
0.0 0.7 GO:0009853 photorespiration(GO:0009853)
0.0 0.1 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.9 GO:0010029 regulation of seed germination(GO:0010029)
0.0 0.1 GO:0006903 vesicle targeting(GO:0006903)
0.0 0.6 GO:1901420 negative regulation of abscisic acid-activated signaling pathway(GO:0009788) negative regulation of response to alcohol(GO:1901420)
0.0 0.1 GO:0006405 RNA export from nucleus(GO:0006405)
0.0 0.1 GO:0098781 ncRNA transcription(GO:0098781)
0.0 0.0 GO:0098876 vesicle-mediated transport to the plasma membrane(GO:0098876)
0.0 0.2 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.0 0.1 GO:0034508 centromere complex assembly(GO:0034508)
0.0 0.1 GO:0017004 cytochrome complex assembly(GO:0017004)
0.0 0.2 GO:0048829 root cap development(GO:0048829)
0.0 0.1 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603) regulation of organelle assembly(GO:1902115)
0.0 0.3 GO:0060249 telomere maintenance(GO:0000723) telomere organization(GO:0032200) anatomical structure homeostasis(GO:0060249)
0.0 0.1 GO:0080187 floral organ senescence(GO:0080187)
0.0 3.8 GO:0035556 intracellular signal transduction(GO:0035556)
0.0 0.3 GO:0001708 cell fate specification(GO:0001708)
0.0 0.0 GO:0016559 peroxisome fission(GO:0016559)
0.0 0.9 GO:0048193 Golgi vesicle transport(GO:0048193)
0.0 0.1 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.0 0.1 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.1 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.0 0.2 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.0 GO:0000002 mitochondrial genome maintenance(GO:0000002)
0.0 0.3 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.0 GO:0071490 cellular response to far red light(GO:0071490)
0.0 0.1 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.1 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.9 GO:0042788 polysomal ribosome(GO:0042788)
0.6 1.7 GO:0030689 Noc complex(GO:0030689)
0.5 1.5 GO:0016328 lateral plasma membrane(GO:0016328)
0.5 2.5 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.5 1.5 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.5 5.5 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.4 1.6 GO:0018444 translation release factor complex(GO:0018444)
0.4 3.1 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.4 1.1 GO:0005814 centrosome(GO:0005813) centriole(GO:0005814)
0.3 1.0 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.3 1.7 GO:0000812 Swr1 complex(GO:0000812)
0.3 3.2 GO:0016272 prefoldin complex(GO:0016272)
0.3 0.9 GO:0005846 nuclear cap binding complex(GO:0005846)
0.3 3.0 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.3 1.8 GO:0009346 citrate lyase complex(GO:0009346)
0.3 3.0 GO:0017119 Golgi transport complex(GO:0017119)
0.3 0.6 GO:0031350 intrinsic component of plastid membrane(GO:0031350) integral component of plastid membrane(GO:0031351)
0.3 3.0 GO:0042555 MCM complex(GO:0042555)
0.3 1.5 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.3 3.2 GO:0005663 DNA replication factor C complex(GO:0005663)
0.3 1.2 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.3 2.3 GO:0055037 recycling endosome(GO:0055037)
0.3 3.7 GO:0045298 tubulin complex(GO:0045298)
0.3 1.1 GO:0009509 chromoplast(GO:0009509)
0.3 0.5 GO:0009501 amyloplast(GO:0009501)
0.3 1.3 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.2 1.0 GO:0030132 clathrin coat of coated pit(GO:0030132)
0.2 1.7 GO:0090395 plant cell papilla(GO:0090395)
0.2 0.9 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.2 3.7 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.2 1.4 GO:0017053 transcriptional repressor complex(GO:0017053)
0.2 3.2 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.2 0.9 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.2 2.2 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.2 5.6 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.2 0.9 GO:0005782 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.2 0.8 GO:0008278 cohesin complex(GO:0008278)
0.2 0.6 GO:0005845 mRNA cap binding complex(GO:0005845) RNA cap binding complex(GO:0034518)
0.2 1.9 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.2 1.4 GO:0000974 Prp19 complex(GO:0000974)
0.2 0.8 GO:0031357 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.2 1.4 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.2 0.8 GO:0010330 cellulose synthase complex(GO:0010330)
0.2 1.5 GO:0005662 DNA replication factor A complex(GO:0005662)
0.2 0.6 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.2 1.7 GO:0005677 chromatin silencing complex(GO:0005677)
0.2 1.5 GO:0010445 nuclear dicing body(GO:0010445)
0.2 0.6 GO:0031897 Tic complex(GO:0031897)
0.2 0.6 GO:0030874 nucleolar chromatin(GO:0030874)
0.2 0.9 GO:0010007 magnesium chelatase complex(GO:0010007)
0.2 2.6 GO:0000314 organellar small ribosomal subunit(GO:0000314)
0.2 1.7 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.2 0.3 GO:0022624 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.2 6.9 GO:0009504 cell plate(GO:0009504)
0.2 3.0 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.2 1.3 GO:0035861 site of double-strand break(GO:0035861)
0.2 0.7 GO:0000931 gamma-tubulin large complex(GO:0000931) gamma-tubulin ring complex(GO:0008274)
0.2 0.6 GO:0032045 guanyl-nucleotide exchange factor complex(GO:0032045)
0.2 1.3 GO:0005884 actin filament(GO:0005884)
0.2 0.3 GO:0055035 plastid thylakoid membrane(GO:0055035)
0.2 1.1 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.2 3.5 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.2 0.5 GO:0035101 FACT complex(GO:0035101)
0.2 2.4 GO:0005769 early endosome(GO:0005769)
0.1 2.4 GO:0070461 SAGA-type complex(GO:0070461)
0.1 1.3 GO:0000347 THO complex(GO:0000347)
0.1 1.0 GO:0030897 HOPS complex(GO:0030897)
0.1 18.6 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 0.7 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 1.4 GO:1903561 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.1 0.8 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.1 0.7 GO:0034657 GID complex(GO:0034657)
0.1 0.4 GO:1990112 RQC complex(GO:1990112)
0.1 0.7 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1 0.4 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 0.7 GO:0030677 ribonuclease P complex(GO:0030677)
0.1 4.9 GO:0000137 Golgi cis cisterna(GO:0000137)
0.1 0.9 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 0.1 GO:0000439 core TFIIH complex(GO:0000439)
0.1 2.2 GO:0035097 histone methyltransferase complex(GO:0035097)
0.1 2.1 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.1 0.4 GO:0005775 vacuolar lumen(GO:0005775)
0.1 0.6 GO:0030286 dynein complex(GO:0030286)
0.1 0.9 GO:0005753 mitochondrial proton-transporting ATP synthase complex(GO:0005753)
0.1 0.4 GO:0005712 chiasma(GO:0005712)
0.1 0.4 GO:0097361 CIA complex(GO:0097361)
0.1 0.6 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 0.6 GO:0034426 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.1 0.4 GO:0032133 chromosome passenger complex(GO:0032133)
0.1 1.6 GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.1 1.4 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.1 1.2 GO:0072546 ER membrane protein complex(GO:0072546)
0.1 0.9 GO:0089701 U2AF(GO:0089701)
0.1 2.1 GO:0030686 90S preribosome(GO:0030686)
0.1 19.6 GO:0022626 cytosolic ribosome(GO:0022626)
0.1 0.7 GO:0098552 side of membrane(GO:0098552)
0.1 1.5 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.1 0.8 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.1 2.9 GO:0016607 nuclear speck(GO:0016607)
0.1 1.5 GO:0045273 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.1 0.5 GO:0034708 methyltransferase complex(GO:0034708)
0.1 0.5 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.1 0.2 GO:1990752 microtubule end(GO:1990752)
0.1 0.7 GO:0035619 root hair tip(GO:0035619)
0.1 0.4 GO:0000922 spindle pole(GO:0000922)
0.1 11.8 GO:0031969 chloroplast membrane(GO:0031969)
0.1 0.3 GO:0033290 eukaryotic 48S preinitiation complex(GO:0033290) multi-eIF complex(GO:0043614)
0.1 0.5 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.1 0.6 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.1 0.1 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.1 2.1 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.1 2.5 GO:0005871 kinesin complex(GO:0005871)
0.1 2.1 GO:0009508 plastid chromosome(GO:0009508)
0.1 12.6 GO:0000790 nuclear chromatin(GO:0000790)
0.1 0.8 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.1 2.0 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.1 2.2 GO:0009574 preprophase band(GO:0009574)
0.1 0.3 GO:0032153 cell division site(GO:0032153)
0.1 2.4 GO:0000145 exocyst(GO:0000145)
0.1 0.3 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.1 0.3 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.1 8.4 GO:0000138 Golgi trans cisterna(GO:0000138)
0.1 0.3 GO:0030139 endocytic vesicle(GO:0030139)
0.1 0.5 GO:0030141 secretory granule(GO:0030141)
0.1 0.6 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.1 0.3 GO:0031211 palmitoyltransferase complex(GO:0002178) serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
0.1 0.5 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.1 0.5 GO:0010168 ER body(GO:0010168)
0.1 1.9 GO:1902554 serine/threonine protein kinase complex(GO:1902554)
0.1 4.8 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 0.3 GO:0033281 TAT protein transport complex(GO:0033281)
0.1 0.5 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.1 0.3 GO:0071007 U2-type catalytic step 2 spliceosome(GO:0071007)
0.1 9.1 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.1 4.0 GO:0031978 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.1 0.5 GO:0030904 retromer complex(GO:0030904)
0.1 1.4 GO:0071011 precatalytic spliceosome(GO:0071011)
0.1 3.7 GO:0016592 mediator complex(GO:0016592)
0.1 0.8 GO:0015934 large ribosomal subunit(GO:0015934)
0.1 0.2 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.1 3.5 GO:0005770 late endosome(GO:0005770)
0.1 0.7 GO:0012507 ER to Golgi transport vesicle membrane(GO:0012507)
0.1 0.6 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.1 0.5 GO:0000796 condensin complex(GO:0000796)
0.1 2.6 GO:0005643 nuclear pore(GO:0005643)
0.1 3.0 GO:0005635 nuclear envelope(GO:0005635)
0.1 4.3 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.1 0.2 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 56.1 GO:0030054 cell-cell junction(GO:0005911) plasmodesma(GO:0009506) cell junction(GO:0030054) symplast(GO:0055044)
0.1 0.4 GO:0005844 polysome(GO:0005844)
0.1 1.4 GO:0042644 chloroplast nucleoid(GO:0042644)
0.1 0.7 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.1 1.3 GO:0000178 exosome (RNase complex)(GO:0000178)
0.1 0.5 GO:0000813 ESCRT I complex(GO:0000813)
0.1 0.4 GO:0008180 COP9 signalosome(GO:0008180)
0.1 1.6 GO:0005819 spindle(GO:0005819)
0.1 0.8 GO:0045275 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.1 1.3 GO:0005840 ribosome(GO:0005840)
0.1 0.2 GO:0005960 glycine cleavage complex(GO:0005960)
0.1 0.5 GO:0070390 transcription export complex 2(GO:0070390)
0.1 34.5 GO:0009570 chloroplast stroma(GO:0009570)
0.1 1.3 GO:0005680 anaphase-promoting complex(GO:0005680)
0.1 2.2 GO:0090575 RNA polymerase II transcription factor complex(GO:0090575)
0.1 22.0 GO:0044434 chloroplast part(GO:0044434)
0.1 1.1 GO:0005875 microtubule associated complex(GO:0005875)
0.1 0.8 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.5 GO:0005746 mitochondrial respiratory chain(GO:0005746) respiratory chain(GO:0070469)
0.1 0.2 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.1 0.5 GO:0030131 clathrin adaptor complex(GO:0030131)
0.1 0.4 GO:0031201 SNARE complex(GO:0031201)
0.1 0.8 GO:0044815 nucleosome(GO:0000786) DNA packaging complex(GO:0044815)
0.1 0.6 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.1 0.1 GO:0030894 alpha DNA polymerase:primase complex(GO:0005658) replisome(GO:0030894) nuclear replisome(GO:0043601)
0.1 0.2 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.1 0.1 GO:0000938 GARP complex(GO:0000938)
0.1 0.6 GO:0042575 DNA polymerase complex(GO:0042575)
0.1 0.5 GO:0030014 CCR4-NOT complex(GO:0030014)
0.1 0.1 GO:0044545 NSL complex(GO:0044545)
0.1 0.6 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.1 1.3 GO:0000118 histone deacetylase complex(GO:0000118)
0.1 1.5 GO:0009579 thylakoid(GO:0009579)
0.1 0.7 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.1 1.1 GO:0036464 ribonucleoprotein granule(GO:0035770) cytoplasmic ribonucleoprotein granule(GO:0036464)
0.0 0.3 GO:0000780 condensed chromosome, centromeric region(GO:0000779) condensed nuclear chromosome, centromeric region(GO:0000780)
0.0 0.3 GO:1902555 endoribonuclease complex(GO:1902555)
0.0 0.6 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 0.2 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.0 0.1 GO:0000835 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.0 6.8 GO:0005768 endosome(GO:0005768)
0.0 96.0 GO:0005829 cytosol(GO:0005829)
0.0 0.9 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.4 GO:0097708 cytoplasmic vesicle(GO:0031410) intracellular vesicle(GO:0097708)
0.0 0.5 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.5 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 1.3 GO:0000228 nuclear chromosome(GO:0000228)
0.0 2.8 GO:0042025 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 0.4 GO:0009526 plastid envelope(GO:0009526)
0.0 1.1 GO:0019866 organelle inner membrane(GO:0019866)
0.0 0.6 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 0.3 GO:0009524 phragmoplast(GO:0009524)
0.0 0.2 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 0.1 GO:0005682 U5 snRNP(GO:0005682)
0.0 0.8 GO:0000428 DNA-directed RNA polymerase complex(GO:0000428)
0.0 5.3 GO:0005774 vacuolar membrane(GO:0005774)
0.0 3.9 GO:0005730 nucleolus(GO:0005730)
0.0 0.9 GO:0005667 transcription factor complex(GO:0005667)
0.0 0.1 GO:0030880 RNA polymerase complex(GO:0030880) RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 40.2 GO:0005886 plasma membrane(GO:0005886)
0.0 0.0 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 4.8 GO:0005794 Golgi apparatus(GO:0005794)
0.0 0.1 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.0 0.7 GO:0099503 secretory vesicle(GO:0099503)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 3.6 GO:0015087 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.8 7.6 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.8 4.2 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.8 3.1 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.8 3.1 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.8 3.8 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.7 2.0 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.6 1.8 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.6 0.6 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.6 1.7 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.6 1.7 GO:0019003 GDP binding(GO:0019003)
0.5 6.0 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.5 1.5 GO:0004776 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.5 3.0 GO:0070547 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.5 2.0 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.5 0.5 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.5 1.9 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.5 3.6 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.4 2.7 GO:0030544 Hsp70 protein binding(GO:0030544)
0.4 2.2 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.4 3.5 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.4 1.3 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.4 1.3 GO:0046422 violaxanthin de-epoxidase activity(GO:0046422)
0.4 1.7 GO:0052595 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.4 2.5 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.4 2.9 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.4 1.2 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.4 1.2 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.4 1.6 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.4 2.5 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.4 2.0 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.4 4.8 GO:0047893 flavonol 3-O-glucosyltransferase activity(GO:0047893)
0.4 1.2 GO:0043325 phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.4 1.2 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.4 1.2 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.4 1.6 GO:0004817 cysteine-tRNA ligase activity(GO:0004817)
0.4 1.2 GO:1990259 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.4 1.9 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.4 2.6 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.4 1.1 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.4 1.8 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.4 2.2 GO:0016312 inositol bisphosphate phosphatase activity(GO:0016312)
0.4 1.1 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.4 1.4 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.4 2.2 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.4 1.4 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.4 1.1 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.4 1.4 GO:0008686 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.3 1.0 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.3 1.3 GO:0008301 DNA binding, bending(GO:0008301)
0.3 1.0 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.3 2.0 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.3 1.0 GO:0050997 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.3 1.3 GO:0004556 alpha-amylase activity(GO:0004556)
0.3 1.6 GO:0070035 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.3 1.0 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.3 1.3 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.3 2.5 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.3 1.9 GO:0019904 protein domain specific binding(GO:0019904)
0.3 1.6 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.3 0.3 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.3 0.9 GO:0008311 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.3 5.3 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.3 1.2 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.3 0.9 GO:0045430 chalcone isomerase activity(GO:0045430)
0.3 0.9 GO:0090422 thiamine pyrophosphate transporter activity(GO:0090422)
0.3 0.9 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.3 1.2 GO:0004174 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.3 1.2 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.3 1.8 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.3 3.0 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.3 3.6 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.3 1.8 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.3 0.6 GO:0016841 ammonia-lyase activity(GO:0016841)
0.3 1.2 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.3 0.9 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.3 2.0 GO:0045431 flavonol synthase activity(GO:0045431)
0.3 1.1 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.3 0.8 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.3 0.8 GO:0016842 amidine-lyase activity(GO:0016842)
0.3 1.9 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.3 3.1 GO:0070300 phosphatidic acid binding(GO:0070300)
0.3 4.7 GO:0016157 sucrose synthase activity(GO:0016157)
0.3 5.5 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.3 0.8 GO:0016504 peptidase activator activity(GO:0016504)
0.3 0.8 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.3 7.8 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.3 1.1 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.3 1.0 GO:0043546 molybdopterin cofactor binding(GO:0043546)
0.3 0.8 GO:0005046 KDEL sequence binding(GO:0005046)
0.3 0.5 GO:0030619 U1 snRNA binding(GO:0030619)
0.3 0.8 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.3 2.8 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.3 1.0 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.3 1.5 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.2 1.0 GO:0046481 digalactosyldiacylglycerol synthase activity(GO:0046481)
0.2 3.2 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.2 1.5 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.2 1.0 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.2 1.7 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.2 0.7 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.2 0.7 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.2 0.9 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.2 0.9 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.2 0.7 GO:0022858 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.2 0.9 GO:0004839 ubiquitin activating enzyme activity(GO:0004839)
0.2 1.1 GO:1902387 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.2 1.6 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.2 0.9 GO:0004057 arginyltransferase activity(GO:0004057)
0.2 0.9 GO:0033862 UMP kinase activity(GO:0033862)
0.2 0.9 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.2 0.2 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.2 0.6 GO:0050377 dTDP-glucose 4,6-dehydratase activity(GO:0008460) UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.2 0.9 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.2 1.7 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.2 0.6 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.2 1.1 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.2 1.0 GO:0035197 siRNA binding(GO:0035197)
0.2 0.6 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
0.2 0.6 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.2 3.1 GO:0004629 phospholipase C activity(GO:0004629)
0.2 2.2 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.2 0.6 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.2 0.8 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.2 0.6 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.2 0.6 GO:0047780 citrate dehydratase activity(GO:0047780)
0.2 1.2 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.2 1.2 GO:0051723 protein methylesterase activity(GO:0051723)
0.2 1.4 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.2 1.6 GO:0001653 peptide receptor activity(GO:0001653)
0.2 3.1 GO:0051117 ATPase binding(GO:0051117)
0.2 2.7 GO:0008097 5S rRNA binding(GO:0008097)
0.2 1.0 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.2 0.8 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.2 3.8 GO:0019902 phosphatase binding(GO:0019902)
0.2 0.8 GO:0016417 S-acyltransferase activity(GO:0016417)
0.2 1.0 GO:0016768 spermine synthase activity(GO:0016768)
0.2 1.3 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.2 0.2 GO:0072349 modified amino acid transmembrane transporter activity(GO:0072349)
0.2 0.8 GO:0004348 glucosylceramidase activity(GO:0004348)
0.2 0.6 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.2 0.9 GO:0051003 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.2 0.2 GO:0030332 cyclin binding(GO:0030332)
0.2 0.6 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.2 1.3 GO:0008022 protein C-terminus binding(GO:0008022)
0.2 3.0 GO:0031369 translation initiation factor binding(GO:0031369)
0.2 0.7 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.2 0.6 GO:0016972 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.2 1.8 GO:0017022 myosin binding(GO:0017022)
0.2 1.1 GO:0016531 copper chaperone activity(GO:0016531)
0.2 0.5 GO:0005078 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.2 0.5 GO:0004788 thiamine diphosphokinase activity(GO:0004788) thiamine binding(GO:0030975)
0.2 2.7 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.2 0.7 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.2 1.2 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.2 0.7 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.2 1.9 GO:0015462 protein-transmembrane transporting ATPase activity(GO:0015462)
0.2 0.7 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.2 0.9 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.2 17.7 GO:0051082 unfolded protein binding(GO:0051082)
0.2 1.4 GO:0017091 AU-rich element binding(GO:0017091)
0.2 0.7 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.2 3.4 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.2 13.8 GO:0003724 RNA helicase activity(GO:0003724)
0.2 2.4 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.2 0.7 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.2 0.8 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.2 1.9 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.2 0.8 GO:0070137 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.2 0.2 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.2 2.6 GO:0035064 methylated histone binding(GO:0035064)
0.2 0.7 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.2 0.7 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.2 4.0 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.2 0.6 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.2 0.8 GO:0003785 actin monomer binding(GO:0003785)
0.2 0.5 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
0.2 0.5 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.2 0.8 GO:0034511 U3 snoRNA binding(GO:0034511)
0.2 1.9 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.2 1.4 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.2 0.6 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.2 0.5 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.2 0.6 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.2 0.5 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.2 1.2 GO:0009916 alternative oxidase activity(GO:0009916)
0.2 1.8 GO:0008235 metalloexopeptidase activity(GO:0008235)
0.1 2.8 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 1.0 GO:0052854 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.1 2.8 GO:0031491 nucleosome binding(GO:0031491)
0.1 1.3 GO:0043495 protein anchor(GO:0043495)
0.1 0.6 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.1 0.6 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.1 4.9 GO:0004812 aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876)
0.1 4.1 GO:0048029 monosaccharide binding(GO:0048029)
0.1 0.4 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.1 0.4 GO:0019779 Atg8 activating enzyme activity(GO:0019779)
0.1 1.3 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.1 0.4 GO:0015026 coreceptor activity(GO:0015026)
0.1 0.9 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.1 0.6 GO:0016751 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.1 0.9 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 1.4 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.1 0.3 GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor(GO:0016668)
0.1 1.3 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 0.7 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.4 GO:0004046 aminoacylase activity(GO:0004046)
0.1 0.7 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.1 1.0 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.1 0.4 GO:0003856 3-dehydroquinate synthase activity(GO:0003856)
0.1 0.7 GO:0035173 histone kinase activity(GO:0035173)
0.1 1.8 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.1 1.3 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.1 0.4 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.1 0.3 GO:0090599 alpha-glucosidase activity(GO:0090599)
0.1 0.4 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 0.7 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.7 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 2.1 GO:0043424 protein histidine kinase binding(GO:0043424)
0.1 0.3 GO:0000155 phosphorelay sensor kinase activity(GO:0000155)
0.1 0.5 GO:0004335 galactokinase activity(GO:0004335)
0.1 1.7 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 0.5 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.1 0.9 GO:0018822 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.1 0.6 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.1 1.3 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 2.3 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.1 0.4 GO:0030941 chloroplast targeting sequence binding(GO:0030941)
0.1 0.6 GO:0051959 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.1 0.6 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.1 0.7 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 3.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 1.2 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.1 0.7 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.1 2.6 GO:0030276 clathrin binding(GO:0030276)
0.1 1.7 GO:0030515 snoRNA binding(GO:0030515)
0.1 0.5 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.1 5.9 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.1 0.6 GO:0022829 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.1 0.5 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.1 0.5 GO:0047215 indole-3-acetate beta-glucosyltransferase activity(GO:0047215)
0.1 0.6 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.1 4.0 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.1 0.2 GO:0003777 microtubule motor activity(GO:0003777)
0.1 1.2 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.1 0.3 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.1 0.8 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.1 0.7 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.1 0.2 GO:0090079 translation regulator activity, nucleic acid binding(GO:0090079)
0.1 1.0 GO:0000014 single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.1 1.3 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 0.3 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.1 0.8 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 1.7 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 0.9 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 4.4 GO:0004707 MAP kinase activity(GO:0004707)
0.1 0.8 GO:0032977 membrane insertase activity(GO:0032977)
0.1 1.2 GO:0052745 inositol phosphate phosphatase activity(GO:0052745)
0.1 0.5 GO:0016034 maleylacetoacetate isomerase activity(GO:0016034)
0.1 0.3 GO:0004488 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.1 2.6 GO:0008143 poly(A) binding(GO:0008143)
0.1 0.4 GO:0004352 glutamate dehydrogenase (NAD+) activity(GO:0004352)
0.1 0.4 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 1.0 GO:0043566 structure-specific DNA binding(GO:0043566)
0.1 0.4 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.1 0.4 GO:0050486 intramolecular transferase activity, transferring hydroxy groups(GO:0050486)
0.1 0.3 GO:0036310 annealing helicase activity(GO:0036310)
0.1 0.1 GO:0004001 adenosine kinase activity(GO:0004001)
0.1 1.6 GO:0051879 Hsp90 protein binding(GO:0051879)
0.1 26.1 GO:0003735 structural constituent of ribosome(GO:0003735)
0.1 0.5 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.1 0.4 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.1 2.4 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.1 1.4 GO:0004017 adenylate kinase activity(GO:0004017)
0.1 0.3 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.1 0.6 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.1 0.3 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.1 0.4 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.1 0.4 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.1 1.1 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.1 0.8 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.1 0.4 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.1 1.7 GO:0070122 isopeptidase activity(GO:0070122)
0.1 0.7 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.1 0.5 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.1 0.6 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 0.9 GO:0035198 miRNA binding(GO:0035198)
0.1 0.5 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.1 0.3 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 5.1 GO:0043621 protein self-association(GO:0043621)
0.1 0.1 GO:0015645 fatty acid ligase activity(GO:0015645)
0.1 0.4 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 3.3 GO:0003727 single-stranded RNA binding(GO:0003727)
0.1 0.5 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.1 0.9 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.1 0.5 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.1 2.0 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 0.8 GO:0004526 ribonuclease P activity(GO:0004526)
0.1 0.6 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 0.3 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.1 0.3 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.1 0.3 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.5 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.3 GO:0030623 U5 snRNA binding(GO:0030623)
0.1 3.3 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.1 0.5 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.1 0.3 GO:0004385 guanylate kinase activity(GO:0004385)
0.1 3.3 GO:0003713 transcription coactivator activity(GO:0003713)
0.1 0.2 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.1 0.4 GO:0015101 organic cation transmembrane transporter activity(GO:0015101)
0.1 1.3 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 0.3 GO:0030267 glyoxylate reductase (NADP) activity(GO:0030267)
0.1 0.8 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.1 3.9 GO:0005198 structural molecule activity(GO:0005198)
0.1 1.6 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 0.6 GO:0051011 microtubule minus-end binding(GO:0051011)
0.1 0.3 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.1 0.7 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.1 0.2 GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity(GO:0008893) diphosphoric monoester hydrolase activity(GO:0016794)
0.1 5.9 GO:0000989 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.1 2.9 GO:0030145 manganese ion binding(GO:0030145)
0.1 0.2 GO:0016635 oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor(GO:0016635)
0.1 0.1 GO:0004766 spermidine synthase activity(GO:0004766)
0.1 0.4 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.1 1.1 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 0.4 GO:0031072 heat shock protein binding(GO:0031072)
0.1 0.3 GO:0004549 tRNA-specific ribonuclease activity(GO:0004549)
0.1 0.4 GO:0016409 palmitoyltransferase activity(GO:0016409)
0.1 47.4 GO:0044822 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.1 0.6 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.1 0.4 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 0.2 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.1 4.7 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.1 0.2 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.1 2.4 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.1 0.8 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 0.8 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.1 0.4 GO:0019137 thioglucosidase activity(GO:0019137)
0.1 0.2 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.1 1.3 GO:0016279 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.1 0.3 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.1 9.2 GO:0043492 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances(GO:0016820) ATPase activity, coupled to transmembrane movement of substances(GO:0042626) ATPase activity, coupled to movement of substances(GO:0043492)
0.1 1.1 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.1 0.2 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.1 0.5 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 0.4 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.2 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.1 0.2 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.1 2.8 GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides(GO:0016811)
0.1 0.7 GO:2001070 starch binding(GO:2001070)
0.1 0.3 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.1 1.9 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.1 0.4 GO:0008079 translation release factor activity(GO:0003747) translation termination factor activity(GO:0008079)
0.1 0.9 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.1 0.2 GO:0004651 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192) polynucleotide phosphatase activity(GO:0098518)
0.1 0.2 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.1 0.7 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.1 2.4 GO:0003678 DNA helicase activity(GO:0003678)
0.1 0.4 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.1 1.6 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.1 0.8 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.9 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.1 7.1 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 0.4 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.1 0.3 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.1 0.4 GO:0004300 enoyl-CoA hydratase activity(GO:0004300)
0.1 0.3 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.1 0.1 GO:0046972 histone acetyltransferase activity (H4-K5 specific)(GO:0043995) histone acetyltransferase activity (H4-K8 specific)(GO:0043996) histone acetyltransferase activity (H4-K16 specific)(GO:0046972)
0.1 2.3 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 0.8 GO:0043175 RNA polymerase core enzyme binding(GO:0043175)
0.1 3.1 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.1 1.1 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.1 0.5 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 0.2 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.1 0.7 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 0.4 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 0.4 GO:0004849 uridine kinase activity(GO:0004849)
0.1 0.4 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.1 0.2 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.1 0.4 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 0.7 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.1 0.2 GO:0017070 U6 snRNA binding(GO:0017070)
0.1 7.1 GO:0016887 ATPase activity(GO:0016887)
0.1 0.9 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.1 0.2 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.0 0.6 GO:0008312 7S RNA binding(GO:0008312)
0.0 0.4 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.3 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 0.2 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.1 GO:0047443 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.0 0.2 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.0 0.3 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.0 0.5 GO:0019905 syntaxin binding(GO:0019905)
0.0 0.1 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.0 0.5 GO:0009008 DNA-methyltransferase activity(GO:0009008)
0.0 0.1 GO:0051010 microtubule plus-end binding(GO:0051010)
0.0 0.1 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.0 1.1 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 2.4 GO:0009931 calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 6.7 GO:0042803 protein homodimerization activity(GO:0042803)
0.0 0.6 GO:0005487 nucleocytoplasmic transporter activity(GO:0005487)
0.0 1.2 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.3 GO:0070568 guanylyltransferase activity(GO:0070568)
0.0 0.4 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.0 0.2 GO:0047714 galactolipase activity(GO:0047714)
0.0 2.5 GO:0016859 cis-trans isomerase activity(GO:0016859)
0.0 1.0 GO:0019208 phosphatase regulator activity(GO:0019208)
0.0 0.4 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 0.2 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.0 2.2 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.4 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.2 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457)
0.0 0.3 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.0 0.7 GO:0015399 primary active transmembrane transporter activity(GO:0015399)
0.0 15.5 GO:0008270 zinc ion binding(GO:0008270)
0.0 0.5 GO:0019210 kinase inhibitor activity(GO:0019210)
0.0 0.3 GO:0008641 small protein activating enzyme activity(GO:0008641)
0.0 0.1 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.0 1.9 GO:0051015 actin filament binding(GO:0051015)
0.0 1.3 GO:0017137 Rab GTPase binding(GO:0017137)
0.0 0.8 GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives(GO:0016857)
0.0 0.1 GO:0016854 racemase and epimerase activity(GO:0016854)
0.0 5.0 GO:0003924 GTPase activity(GO:0003924)
0.0 1.1 GO:0004527 exonuclease activity(GO:0004527)
0.0 5.2 GO:0005509 calcium ion binding(GO:0005509)
0.0 0.1 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.0 0.2 GO:0035250 UDP-galactosyltransferase activity(GO:0035250)
0.0 1.5 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.4 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.0 GO:0017069 snRNA binding(GO:0017069)
0.0 0.5 GO:0005249 voltage-gated potassium channel activity(GO:0005249)
0.0 0.3 GO:0008083 growth factor activity(GO:0008083)
0.0 0.5 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.1 GO:0004765 shikimate kinase activity(GO:0004765)
0.0 0.2 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.2 GO:0015369 calcium:proton antiporter activity(GO:0015369) metal ion:proton antiporter activity(GO:0051139)
0.0 0.6 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.1 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.0 0.8 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.1 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.1 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.0 0.7 GO:0003779 actin binding(GO:0003779)
0.0 0.1 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.0 0.2 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 0.1 GO:0046592 polyamine oxidase activity(GO:0046592)
0.0 2.3 GO:0042802 identical protein binding(GO:0042802)
0.0 0.2 GO:0051184 cofactor transporter activity(GO:0051184)
0.0 0.5 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 4.7 GO:0003723 RNA binding(GO:0003723)
0.0 0.2 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.1 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.0 0.5 GO:0042393 histone binding(GO:0042393)
0.0 0.1 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.0 1.6 GO:0008092 cytoskeletal protein binding(GO:0008092)
0.0 0.0 GO:0042162 telomeric DNA binding(GO:0042162)
0.0 0.1 GO:0010011 auxin binding(GO:0010011)
0.0 0.4 GO:0046915 transition metal ion transmembrane transporter activity(GO:0046915)
0.0 0.1 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.0 1.1 GO:0005516 calmodulin binding(GO:0005516)
0.0 2.2 GO:0043531 ADP binding(GO:0043531)
0.0 1.0 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 8.1 GO:0004672 protein kinase activity(GO:0004672)
0.0 0.0 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.0 2.8 GO:0004175 endopeptidase activity(GO:0004175)
0.0 0.1 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.0 0.5 GO:0003682 chromatin binding(GO:0003682)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.9 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.6 0.6 PID RAS PATHWAY Regulation of Ras family activation
0.6 1.1 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.5 0.5 PID IL4 2PATHWAY IL4-mediated signaling events
0.4 1.3 ST G ALPHA I PATHWAY G alpha i Pathway
0.4 1.2 SIG CHEMOTAXIS Genes related to chemotaxis
0.3 1.0 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.3 0.3 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.3 0.6 ST DIFFERENTIATION PATHWAY IN PC12 CELLS Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway.
0.3 2.5 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.3 0.5 PID A6B1 A6B4 INTEGRIN PATHWAY a6b1 and a6b4 Integrin signaling
0.3 0.3 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.2 0.7 NABA SECRETED FACTORS Genes encoding secreted soluble factors
0.2 0.2 PID P53 REGULATION PATHWAY p53 pathway
0.2 1.7 PID ATR PATHWAY ATR signaling pathway
0.2 1.1 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 0.9 PID NOTCH PATHWAY Notch signaling pathway
0.1 0.2 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.1 0.1 PID EPHA2 FWD PATHWAY EPHA2 forward signaling
0.1 0.3 PID DELTA NP63 PATHWAY Validated transcriptional targets of deltaNp63 isoforms
0.1 0.4 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.1 0.1 PID ATF2 PATHWAY ATF-2 transcription factor network
0.1 0.3 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.0 0.1 PID S1P META PATHWAY Sphingosine 1-phosphate (S1P) pathway
0.0 0.0 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.0 0.1 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.0 0.0 PID S1P S1P1 PATHWAY S1P1 pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.8 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.4 2.5 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.4 1.2 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.4 1.1 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.4 2.6 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.4 2.1 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.3 1.0 REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC
0.3 1.4 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.3 1.8 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.2 1.6 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.2 1.1 REACTOME PROLACTIN RECEPTOR SIGNALING Genes involved in Prolactin receptor signaling
0.2 1.8 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.2 1.0 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.2 0.5 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.2 0.7 REACTOME PROTEIN FOLDING Genes involved in Protein folding
0.1 1.1 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.1 0.5 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.1 0.3 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.1 0.4 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 1.6 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.1 0.1 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.1 0.7 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.1 0.3 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.1 0.4 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1 0.3 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.1 0.2 REACTOME DNA STRAND ELONGATION Genes involved in DNA strand elongation
0.1 0.1 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.0 0.8 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.9 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins
0.0 0.1 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.0 0.1 REACTOME METABOLISM OF NUCLEOTIDES Genes involved in Metabolism of nucleotides
0.0 0.1 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.0 0.0 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling