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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT3G10030

Z-value: 1.22

Transcription factors associated with AT3G10030

Gene Symbol Gene ID Gene Info
AT3G10030
AT3G10030 aspartate/glutamate/uridylate kinase family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT3G10030arTal_v1_Chr3_-_3094945_3095025-0.771.4e-03Click!

Activity profile of AT3G10030 motif

Sorted Z-values of AT3G10030 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_+_6833564 2.11 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
Chr5_+_26772644 1.99 AT5G67080.1
MAPKKK19
mitogen-activated protein kinase kinase kinase 19
Chr3_-_11194897 1.83 AT3G29250.2
AT3G29250.1
SDR4
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_-_9754161 1.69 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
Chr3_+_22129505 1.58 AT3G59900.1
ARGOS
auxin-regulated gene involved in organ size
Chr1_-_749034 1.56 AT1G03106.1
AT1G03106
hypothetical protein
Chr5_+_4370692 1.46 AT5G13580.1
ABCG6
ABC-2 type transporter family protein
Chr2_+_19508929 1.40 AT2G47550.1
AT2G47550
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_+_84474 1.40 AT5G01210.1
AT5G01210
HXXXD-type acyl-transferase family protein
Chr2_-_7768040 1.39 AT2G17880.1
AT2G17880
Chaperone DnaJ-domain superfamily protein
Chr3_-_11195171 1.38 AT3G29250.3
SDR4
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_8912642 1.34 AT1G25400.2
AT1G25400
transmembrane protein
Chr4_-_11896480 1.32 AT4G22590.1
TPPG
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr1_-_8912822 1.31 AT1G25400.1
AT1G25400
transmembrane protein
Chr1_+_3777236 1.28 AT1G11260.1
STP1
sugar transporter 1
Chr2_-_19352088 1.20 AT2G47140.1
SDR5
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_1461786 1.15 AT5G04960.1
AT5G04960
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_-_7493080 1.07 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr4_+_18539511 1.06 AT4G39980.1
DHS1
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1
Chr5_-_25843555 1.06 AT5G64660.1
CMPG2
CYS, MET, PRO, and GLY protein 2
Chr5_-_4566988 1.03 AT5G14150.1
AT5G14150.2
AT5G14150
Emb:.1 protein, putative (Protein of unknown function, DUF642)
Chr5_-_20940895 1.01 AT5G51550.1
EXL3
EXORDIUM like 3
Chr1_-_3444360 1.00 AT1G10470.1
ARR4
response regulator 4
Chr1_-_8983314 1.00 AT1G25560.1
TEM1
AP2/B3 transcription factor family protein
Chr5_-_22024658 1.00 AT5G54240.1
AT5G54240
membrane lipoprotein lipid attachment site-like protein, putative (DUF1223)
Chr1_-_3443957 0.99 AT1G10470.3
AT1G10470.2
ARR4
response regulator 4
Chr5_+_25703649 0.99 AT5G64260.1
EXL2
EXORDIUM like 2
Chr5_+_19179881 0.98 AT5G47230.1
ERF5
ethylene responsive element binding factor 5
Chr3_+_5121303 0.97 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
Chr1_+_26654768 0.91 AT1G70700.3
AT1G70700.2
TIFY7
TIFY domain/Divergent CCT motif family protein
Chr5_+_16202142 0.91 AT5G40460.1
AT5G40460
cyclin-dependent kinase inhibitor SMR3-like protein
Chr1_-_9956960 0.91 AT1G28370.1
AT1G28370.2
ERF11
ERF domain protein 11
Chr3_+_16271511 0.89 AT3G44720.1
ADT4
arogenate dehydratase 4
Chr1_+_26654529 0.89 AT1G70700.1
TIFY7
TIFY domain/Divergent CCT motif family protein
Chr5_+_26818949 0.86 AT5G67210.1
IRX15-L
IRREGULAR XYLEM protein (DUF579)
Chr1_-_6241510 0.86 AT1G18140.1
LAC1
laccase 1
Chr3_+_1591115 0.83 AT3G05490.1
RALFL22
ralf-like 22
Chr1_+_25657757 0.83 AT1G68440.1
AT1G68440
transmembrane protein
Chr1_-_29638773 0.83 AT1G78830.1
AT1G78830
Curculin-like (mannose-binding) lectin family protein
Chr1_+_618061 0.83 AT1G02810.1
AT1G02810
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_-_16690182 0.82 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
Chr3_-_18649521 0.80 AT3G50310.1
MAPKKK20
mitogen-activated protein kinase kinase kinase 20
Chr3_+_22492811 0.79 AT3G60870.1
AHL18
AT-hook motif nuclear-localized protein 18
Chr5_+_8042853 0.78 AT5G23860.1
AT5G23860.2
TUB8
tubulin beta 8
Chr4_+_17882644 0.77 AT4G38080.1
AT4G38080
hydroxyproline-rich glycoprotein family protein
Chr5_-_5358789 0.77 AT5G16370.1
AAE5
acyl activating enzyme 5
Chr5_+_1378954 0.75 AT5G04770.3
CAT6
cationic amino acid transporter 6
Chr5_-_5351095 0.73 AT5G16340.1
AT5G16340
AMP-dependent synthetase and ligase family protein
Chr5_-_967432 0.72 AT5G03700.1
AT5G03700
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr4_-_11623797 0.72 AT4G21903.2
AT4G21903.1
AT4G21903
MATE efflux family protein
Chr5_+_1378788 0.72 AT5G04770.2
CAT6
cationic amino acid transporter 6
Chr5_+_2938193 0.71 AT5G09440.1
EXL4
EXORDIUM like 4
Chr5_+_1378621 0.71 AT5G04770.1
CAT6
cationic amino acid transporter 6
Chr3_+_9195334 0.71 AT3G25250.1
AGC2-1
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Chr4_+_7758275 0.70 AT4G13340.1
LRX3
Leucine-rich repeat (LRR) family protein
Chr1_+_7346156 0.69 AT1G21010.1
AT1G21010
poly polymerase
Chr1_+_6389399 0.68 AT1G18570.1
MYB51
myb domain protein 51
Chr3_+_546739 0.68 AT3G02580.1
STE1
sterol 1
Chr3_-_2830649 0.68 AT3G09220.2
AT3G09220.1
LAC7
laccase 7
Chr1_-_26327965 0.68 AT1G69900.1
AT1G69900
Actin cross-linking protein
Chr5_+_21216772 0.67 AT5G52250.1
RUP1
Transducin/WD40 repeat-like superfamily protein
Chr5_-_20468128 0.67 AT5G50300.1
AT5G50300.2
AZG2
Xanthine/uracil permease family protein
Chr1_+_12180483 0.67 AT1G33600.1
AT1G33600
Leucine-rich repeat (LRR) family protein
Chr3_-_4834015 0.66 AT3G14440.1
NCED3
nine-cis-epoxycarotenoid dioxygenase 3
Chr3_+_2347186 0.66 AT3G07350.1
AT3G07350
sulfate/thiosulfate import ATP-binding protein, putative (DUF506)
Chr4_+_160643 0.65 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr3_-_17180559 0.65 AT3G46620.1
RDUF1
zinc finger (C3HC4-type RING finger) family protein
Chr1_+_19958380 0.64 AT1G53470.1
MSL4
mechanosensitive channel of small conductance-like 4
Chr3_+_19090947 0.64 AT3G51450.1
AT3G51450
Calcium-dependent phosphotriesterase superfamily protein
Chr3_-_9471039 0.64 AT3G25882.1
NIMIN-2
NIM1-interacting 2
Chr1_-_2563706 0.63 AT1G08170.1
AT1G08170
Histone superfamily protein
Chr5_+_320349 0.62 AT5G01830.1
SAUR21
ARM repeat superfamily protein
Chr1_-_5068677 0.62 AT1G14720.1
XTH28
xyloglucan endotransglucosylase/hydrolase 28
Chr5_+_21943983 0.62 AT5G54070.1
HSFA9
heat shock transcription factor A9
Chr3_-_7879810 0.62 AT3G22275.1
AT3G22275
jasmonate ZIM-domain protein
Chr4_-_11624459 0.61 AT4G21903.3
AT4G21903
MATE efflux family protein
Chr3_-_22111609 0.61 AT3G59850.1
AT3G59850.2
AT3G59850
Pectin lyase-like superfamily protein
Chr3_-_9008801 0.61 AT3G24670.1
AT3G24670
Pectin lyase-like superfamily protein
Chr2_+_11566288 0.61 AT2G27080.1
AT2G27080
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr3_-_20121314 0.60 AT3G54340.1
AP3
K-box region and MADS-box transcription factor family protein
Chr1_+_12180776 0.60 AT1G33600.2
AT1G33600
Leucine-rich repeat (LRR) family protein
Chr1_-_22067076 0.60 AT1G59940.1
ARR3
response regulator 3
Chr2_-_3312651 0.60 AT2G07687.1
AT2G07687
Cytochrome c oxidase, subunit III
Chr5_-_26246960 0.60 AT5G65660.1
AT5G65660
hydroxyproline-rich glycoprotein family protein
Chr3_+_22349308 0.59 AT3G60490.1
AT3G60490
Integrase-type DNA-binding superfamily protein
Chr1_-_22067233 0.58 AT1G59940.2
ARR3
response regulator 3
Chr4_+_12600803 0.58 AT4G24310.1
AT4G24310
transmembrane protein, putative (DUF679)
Chr4_-_481160 0.58 AT4G01110.1
AT4G01110
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
Chr5_-_24000166 0.57 AT5G59550.2
RDUF2
zinc finger (C3HC4-type RING finger) family protein
Chr5_-_1467161 0.57 AT5G04970.1
AT5G04970
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_-_23999837 0.56 AT5G59550.1
RDUF2
zinc finger (C3HC4-type RING finger) family protein
Chr1_+_9746709 0.56 AT1G27970.1
AT1G27970.2
NTF2B
nuclear transport factor 2B
Chr1_-_22595338 0.56 AT1G61260.1
AT1G61260
cotton fiber (DUF761)
Chr4_+_7038437 0.55 AT4G11655.1
AT4G11655.2
AT4G11655
Uncharacterized protein family (UPF0497)
Chr1_+_28517939 0.55 AT1G75960.1
AT1G75960
AMP-dependent synthetase and ligase family protein
Chr3_-_19165322 0.55 AT3G51660.1
AT3G51660
Tautomerase/MIF superfamily protein
Chr2_-_18914739 0.54 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
Chr5_+_24844248 0.54 AT5G61850.2
AT5G61850.1
LFY
floral meristem identity control protein LEAFY (LFY)
Chr1_-_28396677 0.54 AT1G75620.1
AT1G75620
glyoxal oxidase-related protein
Chr3_+_6843662 0.53 AT3G19700.1
IKU2
Leucine-rich repeat protein kinase family protein
Chr2_+_11563933 0.53 AT2G27080.2
AT2G27080
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr1_-_13125263 0.53 AT1G35580.3
AT1G35580.1
AT1G35580.2
CINV1
cytosolic invertase 1
Chr1_+_28163344 0.53 AT1G75000.1
AT1G75000
GNS1/SUR4 membrane protein family
Chr1_+_5376793 0.53 AT1G15630.1
AT1G15630
transmembrane protein
Chr3_+_3352077 0.53 AT3G10710.1
RHS12
root hair specific 12
Chr5_+_4756057 0.53 AT5G14730.1
AT5G14730
hypothetical protein
Chr1_-_6908805 0.53 AT1G19900.1
AT1G19900
glyoxal oxidase-related protein
Chr2_+_18495215 0.52 AT2G44840.1
ERF13
ethylene-responsive element binding factor 13
Chr2_+_14710754 0.52 AT2G34870.1
MEE26
hydroxyproline-rich glycoprotein family protein
Chr4_+_17881504 0.52 AT4G38070.1
AT4G38070
transcription factor bHLH131-like protein
Chr1_-_24362054 0.52 AT1G65520.1
ECI1
delta(3), delta(2)-enoyl CoA isomerase 1
Chr5_-_1580875 0.52 AT5G05340.1
PRX52
Peroxidase superfamily protein
Chr3_-_20552215 0.52 AT3G55430.1
AT3G55430
O-Glycosyl hydrolases family 17 protein
Chr3_-_3357754 0.51 AT3G10720.2
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_-_15081712 0.51 AT4G30980.1
AT4G30980.2
LRL2
LJRHL1-like 2
Chr3_+_20666887 0.51 AT3G55690.1
AT3G55690
hypothetical protein
Chr2_+_11041331 0.51 AT2G25900.2
AT2G25900.1
ATCTH
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr5_+_1332759 0.51 AT5G04640.1
AGL99
AGAMOUS-like 99
Chr5_-_18579241 0.51 AT5G45800.2
AT5G45800.1
MEE62
Leucine-rich repeat protein kinase family protein
Chr1_+_6100964 0.50 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
Chr4_+_12278915 0.50 AT4G23530.1
AT4G23530
ROH1, putative (DUF793)
Chr2_+_15056753 0.50 AT2G35850.1
AT2G35850
transmembrane protein
Chr1_+_8401808 0.50 AT1G23760.1
JP630
BURP domain-containing protein
Chr5_+_25322975 0.50 AT5G63130.2
AT5G63130.1
AT5G63130
Octicosapeptide/Phox/Bem1p family protein
Chr5_+_2616134 0.50 AT5G08139.1
AT5G08139
RING/U-box superfamily protein
Chr5_+_2616287 0.50 AT5G08139.2
AT5G08139
RING/U-box superfamily protein
Chr5_+_21307016 0.50 AT5G52510.1
SCL8
SCARECROW-like 8
Chr3_+_3314432 0.50 AT3G10600.2
CAT7
cationic amino acid transporter 7
Chr1_+_25255155 0.49 AT1G67420.3
AT1G67420.4
AT1G67420.2
AT1G67420.5
AT1G67420.6
AT1G67420.1
AT1G67420
Zn-dependent exopeptidases superfamily protein
Chr5_+_4591690 0.49 AT5G14230.1
AT5G14230
ankyrin
Chr5_+_72292 0.48 AT5G01190.2
AT5G01190.1
LAC10
laccase 10
Chr5_+_435168 0.48 AT5G02190.1
PCS1
Eukaryotic aspartyl protease family protein
Chr4_+_7962428 0.48 AT4G13710.1
AT4G13710.2
AT4G13710
Pectin lyase-like superfamily protein
Chr1_-_28383769 0.48 AT1G75590.1
AT1G75590
SAUR-like auxin-responsive protein family
Chr3_+_20065607 0.47 AT3G54200.1
AT3G54200
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr3_+_3313953 0.47 AT3G10600.1
CAT7
cationic amino acid transporter 7
Chr3_+_8610979 0.47 AT3G23840.1
AT3G23840
HXXXD-type acyl-transferase family protein
Chr4_-_17033972 0.47 AT4G35985.3
AT4G35985.2
AT4G35985
Senescence/dehydration-associated protein-like protein
Chr1_-_18366559 0.46 AT1G49620.1
ICK5
Cyclin-dependent kinase inhibitor family protein
Chr3_-_202754 0.46 AT3G01513.1
AT3G01513
hypothetical protein
Chr2_-_16804823 0.46 AT2G40230.1
AT2G40230
HXXXD-type acyl-transferase family protein
Chr1_+_17065111 0.46 AT1G45130.1
BGAL5
beta-galactosidase 5
Chr5_-_7040919 0.46 AT5G20790.1
AT5G20790
transmembrane protein
Chr3_+_19880504 0.46 AT3G53620.1
PPa4
pyrophosphorylase 4
Chr3_+_17867131 0.45 AT3G48240.1
AT3G48240
Octicosapeptide/Phox/Bem1p family protein
Chr2_-_15790139 0.44 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
Chr1_-_9968301 0.44 AT1G28390.2
AT1G28390
Protein kinase superfamily protein
Chr4_-_15181937 0.44 AT4G31250.1
AT4G31250
Leucine-rich repeat protein kinase family protein
Chr1_-_25662276 0.44 AT1G68450.1
PDE337
VQ motif-containing protein
Chr1_+_4872856 0.44 AT1G14260.2
AT1G14260.1
AT1G14260
RING/FYVE/PHD zinc finger superfamily protein
Chr4_+_12527675 0.43 AT4G24130.1
AT4G24130
DUF538 family protein (Protein of unknown function, DUF538)
Chr1_-_5513933 0.42 AT1G16070.3
AT1G16070.2
AT1G16070.1
TLP8
tubby like protein 8
Chr1_-_26362010 0.42 AT1G69990.1
AT1G69990
Leucine-rich repeat protein kinase family protein
Chr1_-_9968495 0.42 AT1G28390.1
AT1G28390
Protein kinase superfamily protein
Chr1_-_59215 0.41 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
Chr1_+_4542168 0.41 AT1G13260.1
RAV1
related to ABI3/VP1 1
Chr4_+_6967709 0.40 AT4G11470.2
AT4G11470.1
CRK31
cysteine-rich RLK (RECEPTOR-like protein kinase) 31
Chr1_+_17065858 0.40 AT1G45130.2
BGAL5
beta-galactosidase 5
Chr1_+_7272526 0.40 AT1G20900.1
ESC
Putative AT-hook DNA-binding family protein
Chr2_+_385171 0.39 AT2G01850.1
EXGT-A3
endoxyloglucan transferase A3
Chr2_-_15789605 0.39 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
Chr3_-_15092521 0.39 AT3G43110.1
AT3G43110
transmembrane protein
Chr1_-_27377473 0.39 AT1G72720.1
AT1G72720
hypothetical protein (DUF3511)
Chr4_+_18576216 0.39 AT4G40070.1
AT4G40070
RING/U-box superfamily protein
Chr3_-_2306615 0.39 AT3G07250.1
AT3G07250
RNA-binding (RRM-RBD-RNP motif) domain nuclear transport factor 2 family protein
Chr2_+_14196732 0.39 AT2G33520.1
AT2G33520
cysteine-rich/transmembrane domain protein A
Chr5_+_22555995 0.39 AT5G55720.1
AT5G55720
Pectin lyase-like superfamily protein
Chr1_+_10571310 0.38 AT1G30100.1
NCED5
nine-cis-epoxycarotenoid dioxygenase 5
Chr3_-_20756690 0.38 AT3G55950.1
CCR3
CRINKLY4 related 3
Chr1_-_29993724 0.38 AT1G79700.1
AT1G79700.3
AT1G79700.2
WRI4
Integrase-type DNA-binding superfamily protein
Chr4_-_17034244 0.38 AT4G35985.1
AT4G35985
Senescence/dehydration-associated protein-like protein
Chr1_-_13421119 0.37 AT1G35995.1
AT1G35995

Chr1_+_20137537 0.37 AT1G53920.1
GLIP5
GDSL-motif lipase 5
Chr5_-_15754690 0.37 AT5G39360.1
EDL2
EID1-like 2
Chr2_-_7810811 0.37 AT2G17950.1
WUS
Homeodomain-like superfamily protein
Chr5_-_5253790 0.37 AT5G16080.1
CXE17
carboxyesterase 17
Chr1_+_10936923 0.37 AT1G30800.1
AT1G30800
Fasciclin-like arabinogalactan family protein
Chr3_-_17376054 0.36 AT3G47190.1
AT3G47190
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_+_3133244 0.36 AT5G10020.1
AT5G10020.2
AT5G10020
Leucine-rich receptor-like protein kinase family protein
Chr2_-_10317353 0.36 AT2G24255.1
AT2G24255
LOW protein: F-box/kelch-repeat protein
Chr1_-_18366744 0.36 AT1G49620.3
AT1G49620.2
ICK5
Cyclin-dependent kinase inhibitor family protein
Chr5_+_4593198 0.36 AT5G14230.2
AT5G14230
ankyrin
Chr4_+_10398857 0.36 AT4G18980.1
AtS40-3
AtS40-3
Chr4_+_14151387 0.35 AT4G28670.1
AT4G28670
cysteine-rich RECEPTOR-like kinase, putative (DUF26)
Chr3_+_4988008 0.35 AT3G14840.2
AT3G14840.1
AT3G14840
Leucine-rich repeat transmembrane protein kinase
Chr4_+_11619735 0.35 AT4G21902.1
AT4G21902
hypothetical protein
Chr2_+_18791289 0.35 AT2G45610.1
AT2G45610
alpha/beta-Hydrolases superfamily protein
Chr4_-_7133385 0.35 AT4G11850.1
PLDGAMMA1
phospholipase D gamma 1
Chr5_+_3799408 0.34 AT5G11790.2
AT5G11790.1
NDL2
N-MYC downregulated-like 2
Chr4_+_550175 0.34 AT4G01330.1
AT4G01330
Protein kinase superfamily protein
Chr3_+_18620450 0.34 AT3G50230.2
AT3G50230.1
AT3G50230
Leucine-rich repeat protein kinase family protein
Chr3_-_18364956 0.34 AT3G49530.2
AT3G49530.1
NAC062
NAC domain containing protein 62
Chr4_-_13214509 0.33 AT4G26055.1
AT4G26055
transmembrane protein
Chr3_-_3585850 0.33 AT3G11410.1
PP2CA
protein phosphatase 2CA
Chr4_+_550349 0.33 AT4G01330.2
AT4G01330.3
AT4G01330
Protein kinase superfamily protein
Chr4_-_810574 0.33 AT4G01870.1
AT4G01870.2
AT4G01870
tolB protein-like protein
Chr3_-_3356811 0.32 AT3G10720.1
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_-_2156153 0.32 AT1G07020.1
AT1G07020
hypothetical protein
Chr3_+_9396272 0.32 AT3G25730.1
EDF3
ethylene response DNA binding factor 3
Chr5_-_1207679 0.32 AT5G04310.2
AT5G04310.3
AT5G04310
Pectin lyase-like superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G10030

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.6 GO:0046622 positive regulation of organ growth(GO:0046622)
0.2 2.1 GO:0051865 protein autoubiquitination(GO:0051865)
0.1 0.5 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.1 0.5 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.1 0.7 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 1.3 GO:0015749 monosaccharide transport(GO:0015749)
0.1 0.5 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 0.3 GO:0033194 response to hydroperoxide(GO:0033194)
0.1 1.1 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.1 2.2 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.1 0.3 GO:0090603 sieve element differentiation(GO:0090603)
0.1 0.6 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.1 1.1 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 1.2 GO:0010161 red light signaling pathway(GO:0010161)
0.1 0.3 GO:0010482 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.1 1.0 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.1 1.2 GO:0010093 specification of floral organ identity(GO:0010093)
0.1 0.4 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.3 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 3.6 GO:0010114 response to red light(GO:0010114)
0.1 1.8 GO:0010345 suberin biosynthetic process(GO:0010345)
0.1 0.3 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 1.1 GO:1902645 abscisic acid biosynthetic process(GO:0009688) apocarotenoid biosynthetic process(GO:0043289) tertiary alcohol biosynthetic process(GO:1902645)
0.1 4.3 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.1 2.5 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.1 0.3 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.1 0.6 GO:0080086 stamen filament development(GO:0080086)
0.1 0.2 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.0 1.6 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.5 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.0 4.0 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.7 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.0 0.5 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.5 GO:0010274 hydrotropism(GO:0010274)
0.0 0.1 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.0 3.9 GO:0080167 response to karrikin(GO:0080167)
0.0 0.5 GO:0030497 fatty acid elongation(GO:0030497)
0.0 0.8 GO:0090333 regulation of stomatal closure(GO:0090333)
0.0 0.3 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.5 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.4 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.0 0.3 GO:0010044 response to aluminum ion(GO:0010044)
0.0 1.0 GO:0006865 amino acid transport(GO:0006865)
0.0 1.6 GO:0002239 response to oomycetes(GO:0002239)
0.0 0.1 GO:0006059 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.0 0.9 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.1 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.0 0.1 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.0 0.2 GO:0010160 formation of organ boundary(GO:0010160) formation of anatomical boundary(GO:0048859)
0.0 1.9 GO:0010200 response to chitin(GO:0010200)
0.0 0.3 GO:0046348 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.7 GO:0009851 auxin biosynthetic process(GO:0009851)
0.0 3.5 GO:0071456 cellular response to hypoxia(GO:0071456)
0.0 1.1 GO:0019722 calcium-mediated signaling(GO:0019722)
0.0 0.1 GO:0033206 meiotic cytokinesis(GO:0033206)
0.0 0.6 GO:0006606 protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744)
0.0 0.5 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.0 0.2 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.0 0.5 GO:0009960 endosperm development(GO:0009960)
0.0 0.3 GO:0010928 regulation of auxin mediated signaling pathway(GO:0010928)
0.0 0.5 GO:0009625 response to insect(GO:0009625)
0.0 0.3 GO:0008361 regulation of cell size(GO:0008361)
0.0 0.1 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.0 0.7 GO:0048544 recognition of pollen(GO:0048544)
0.0 0.0 GO:0071457 cellular response to ozone(GO:0071457)
0.0 0.2 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.0 0.6 GO:0034605 cellular response to heat(GO:0034605)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.6 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.1 0.4 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.8 GO:0045298 tubulin complex(GO:0045298)
0.0 0.3 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 3.3 GO:0009505 plant-type cell wall(GO:0009505)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.1 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.3 2.4 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.3 1.1 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.2 0.7 GO:0000248 C-5 sterol desaturase activity(GO:0000248)
0.2 1.1 GO:0003680 AT DNA binding(GO:0003680)
0.2 1.1 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 3.1 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.1 0.5 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.1 0.5 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 0.8 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 0.3 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.1 2.0 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.6 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 3.2 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 1.8 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.1 1.3 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 1.6 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.7 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.5 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 0.8 GO:0004709 MAP kinase kinase activity(GO:0004708) MAP kinase kinase kinase activity(GO:0004709)
0.1 0.4 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 0.4 GO:0030332 cyclin binding(GO:0030332)
0.0 0.5 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.3 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.0 3.0 GO:0019901 protein kinase binding(GO:0019901)
0.0 0.2 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142)
0.0 0.5 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.7 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.9 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.3 GO:0035198 miRNA binding(GO:0035198)
0.0 2.2 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.5 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 1.0 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.6 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 0.2 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.0 0.8 GO:0005179 hormone activity(GO:0005179)
0.0 0.8 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.9 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.2 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.5 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.3 GO:0008061 chitin binding(GO:0008061)
0.0 0.3 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.1 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.3 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.2 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.0 2.6 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 2.9 GO:0005507 copper ion binding(GO:0005507)
0.0 0.3 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.1 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 0.1 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.3 GO:0008810 cellulase activity(GO:0008810)
0.0 0.7 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.2 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.0 0.2 PID MYC PATHWAY C-MYC pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.0 0.4 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.5 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism