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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT3G09735

Z-value: 1.28

Transcription factors associated with AT3G09735

Gene Symbol Gene ID Gene Info
AT3G09735
AT3G09735 S1FA-like DNA-binding protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT3G09735arTal_v1_Chr3_-_2987990_29879900.107.2e-01Click!

Activity profile of AT3G09735 motif

Sorted Z-values of AT3G09735 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_+_5209717 2.67 AT5G15960.1
KIN1
stress-responsive protein (KIN1) / stress-induced protein (KIN1)
Chr1_+_3019639 1.75 AT1G09350.1
GolS3
galactinol synthase 3
Chr1_+_28975255 1.64 AT1G77120.1
ADH1
alcohol dehydrogenase 1
Chr1_+_3020221 1.62 AT1G09350.2
GolS3
galactinol synthase 3
Chr3_-_2699257 1.61 AT3G08860.2
PYD4
PYRIMIDINE 4
Chr3_-_2699420 1.57 AT3G08860.1
PYD4
PYRIMIDINE 4
Chr2_-_19370478 1.52 AT2G47180.1
GolS1
galactinol synthase 1
Chr4_+_14954204 1.49 AT4G30650.1
AT4G30650
Low temperature and salt responsive protein family
Chr3_-_489467 1.49 AT3G02380.1
COL2
CONSTANS-like 2
Chr5_-_8444101 1.40 AT5G24660.1
LSU2
response to low sulfur 2
Chr4_-_9607402 1.38 AT4G17090.1
CT-BMY
chloroplast beta-amylase
Chr2_-_16603059 1.36 AT2G39800.2
AT2G39800.4
AT2G39800.3
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
Chr3_+_4729399 1.31 AT3G14210.1
AT3G14210.2
ESM1
GDSL-like lipase/acylhydrolase superfamily protein
Chr5_+_5206156 1.28 AT5G15950.2
AT5G15950
Adenosylmethionine decarboxylase family protein
Chr1_+_6763765 1.27 AT1G19530.1
AT1G19530.2
AT1G19530
DNA polymerase epsilon catalytic subunit A
Chr3_-_17475274 1.26 AT3G47420.3
AT3G47420.1
AT3G47420.2
G3Pp1
putative glycerol-3-phosphate transporter 1
Chr2_+_1993038 1.26 AT2G05440.2
AT2G05440.9
AT2G05440.5
AT2G05440.1
AT2G05440.6
AT2G05440.3
AT2G05440.4
AT2G05440.8
AT2G05440.7
GRP9
GLYCINE RICH PROTEIN 9
Chr5_+_5205869 1.25 AT5G15950.1
AT5G15950
Adenosylmethionine decarboxylase family protein
Chr4_-_2992618 1.22 AT4G05631.1
AT4G05631
hypothetical protein
Chr2_+_18346306 1.18 AT2G44460.1
BGLU28
beta glucosidase 28
Chr4_+_13253084 1.17 AT4G26150.1
CGA1
cytokinin-responsive gata factor 1
Chr2_-_16603319 1.16 AT2G39800.1
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
Chr1_-_1248826 1.16 AT1G04570.2
AT1G04570.1
AT1G04570
Major facilitator superfamily protein
Chr2_+_18347765 1.13 AT2G44460.2
BGLU28
beta glucosidase 28
Chr1_-_24595544 1.13 AT1G66060.1
AT1G66060
hypothetical protein (DUF577)
Chr3_+_19265141 1.11 AT3G51910.1
HSFA7A
heat shock transcription factor A7A
Chr3_-_5173001 1.11 AT3G15354.4
AT3G15354.1
AT3G15354.2
AT3G15354.3
SPA3
SPA1-related 3
Chr2_+_19232607 1.10 AT2G46790.3
AT2G46790.4
AT2G46790.1
AT2G46790.2
AT2G46790.5
PRR9
pseudo-response regulator 9
Chr2_-_18811085 1.08 AT2G45660.2
AT2G45660.1
AGL20
AGAMOUS-like 20
Chr4_-_18472048 1.08 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
Chr4_+_1292483 1.08 AT4G02920.1
AT4G02920.2
AT4G02920
hypothetical protein
Chr3_+_19845097 1.06 AT3G53530.2
AT3G53530.1
NAKR3
Chloroplast-targeted copper chaperone protein
Chr1_-_37757 1.05 AT1G01060.3
AT1G01060.2
AT1G01060.4
AT1G01060.1
AT1G01060.6
AT1G01060.7
AT1G01060.5
LHY
Homeodomain-like superfamily protein
Chr1_-_30142697 1.04 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_29459493 1.03 AT1G78290.2
AT1G78290.3
SNRK2-8
Protein kinase superfamily protein
Chr3_-_22915393 1.00 AT3G61890.1
HB-12
homeobox 12
Chr2_+_7316789 1.00 AT2G16890.3
AT2G16890.2
AT2G16890.1
AT2G16890.4
AT2G16890
UDP-Glycosyltransferase superfamily protein
Chr1_+_22198266 0.99 AT1G60190.1
PUB19
ARM repeat superfamily protein
Chr3_-_18373147 0.97 AT3G49570.1
LSU3
response to low sulfur 3
Chr5_+_6718206 0.94 AT5G19875.1
AT5G19875
transmembrane protein
Chr4_+_17646408 0.94 AT4G37560.1
AT4G37560.2
AT4G37560
Acetamidase/Formamidase family protein
Chr5_-_25920254 0.92 AT5G64840.1
ABCF5
general control non-repressible 5
Chr5_+_22467337 0.91 AT5G55450.1
AT5G55450
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_8085669 0.91 AT3G22840.1
ELIP1
Chlorophyll A-B binding family protein
Chr2_-_10702203 0.91 AT2G25140.1
CLPB4
casein lytic proteinase B4
Chr3_+_5705541 0.90 AT3G16770.1
EBP
ethylene-responsive element binding protein
Chr3_-_23195917 0.90 AT3G62700.1
ABCC14
multidrug resistance-associated protein 10
Chr1_-_4651549 0.89 AT1G13600.1
bZIP58
basic leucine-zipper 58
Chr2_-_9056481 0.89 AT2G21130.1
AT2G21130
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr1_+_17847042 0.88 AT1G48300.1
DGAT3
diacylglycerol acyltransferase
Chr5_-_14753088 0.87 AT5G37260.1
RVE2
Homeodomain-like superfamily protein
Chr1_+_11181504 0.86 AT1G31280.1
AGO2
Argonaute family protein
Chr1_-_26163715 0.85 AT1G69570.1
AT1G69570
Dof-type zinc finger DNA-binding family protein
Chr3_-_9640918 0.84 AT3G26300.1
CYP71B34
cytochrome P450, family 71, subfamily B, polypeptide 34
Chr5_+_451406 0.83 AT5G02240.1
AT5G02240
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_22977625 0.83 AT1G62180.2
APR2
5'adenylylphosphosulfate reductase 2
Chr4_+_9171280 0.83 AT4G16190.1
AT4G16190
Papain family cysteine protease
Chr3_-_9642779 0.83 AT3G26310.1
CYP71B35
cytochrome P450, family 71, subfamily B, polypeptide 35
Chr5_+_8541713 0.82 AT5G24860.3
AT5G24860.1
FPF1
flowering promoting factor 1
Chr5_-_24955503 0.82 AT5G62140.1
AT5G62140
ATP-dependent Clp protease ATP-binding subunit
Chr1_-_25238036 0.82 AT1G67360.1
AT1G67360
Rubber elongation factor protein (REF)
Chr1_-_25238216 0.82 AT1G67360.2
AT1G67360
Rubber elongation factor protein (REF)
Chr1_-_22977885 0.81 AT1G62180.1
APR2
5'adenylylphosphosulfate reductase 2
Chr2_-_8850111 0.80 AT2G20560.1
AT2G20560
DNAJ heat shock family protein
Chr3_+_1225919 0.79 AT3G04550.1
AT3G04550
rubisco accumulation factor-like protein
Chr3_-_17133462 0.79 AT3G46530.1
RPP13
NB-ARC domain-containing disease resistance protein
Chr4_-_10325816 0.79 AT4G18810.2
AT4G18810.1
AT4G18810
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_+_994726 0.79 AT4G02280.1
SUS3
sucrose synthase 3
Chr5_-_648538 0.78 AT5G02830.1
AT5G02830
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_16579936 0.78 AT5G41410.1
BEL1
POX (plant homeobox) family protein
Chr1_-_20731289 0.77 AT1G55530.3
AT1G55530.2
AT1G55530.1
AT1G55530
RING/U-box superfamily protein
Chr3_-_6143310 0.77 AT3G17930.1
DAC
transmembrane protein
Chr1_-_6308243 0.77 AT1G18330.1
EPR1
Homeodomain-like superfamily protein
Chr1_-_6308010 0.77 AT1G18330.2
EPR1
Homeodomain-like superfamily protein
Chr3_+_8918679 0.77 AT3G24500.2
MBF1C
multiprotein bridging factor 1C
Chr5_-_24836933 0.77 AT5G61820.1
AT5G61820.2
AT5G61820
stress up-regulated Nod 19 protein
Chr4_-_11659105 0.77 AT4G21990.1
AT4G21990.2
APR3
APS reductase 3
Chr5_-_18768992 0.76 AT5G46270.2
AT5G46270.3
AT5G46270.4
AT5G46270.1
AT5G46270.5
AT5G46270
Disease resistance protein (TIR-NBS-LRR class) family
Chr3_-_22244061 0.76 AT3G60180.2
AT3G60180.1
AT3G60180
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_-_2697724 0.75 AT5G08380.2
AT5G08380.1
AGAL1
alpha-galactosidase 1
Chr1_-_29002135 0.75 AT1G77180.1
AT1G77180.3
AT1G77180.2
SKIP
chromatin protein family
Chr1_+_25999837 0.75 AT1G69160.1
AT1G69160
suppressor
Chr2_-_8495892 0.75 AT2G19650.1
AT2G19650
Cysteine/Histidine-rich C1 domain family protein
Chr3_-_5171674 0.75 AT3G15354.5
SPA3
SPA1-related 3
Chr2_-_1032625 0.74 AT2G03390.6
AT2G03390.3
AT2G03390.2
AT2G03390.4
AT2G03390.7
AT2G03390.5
AT2G03390.1
AT2G03390
uvrB/uvrC motif-containing protein
Chr4_+_10861382 0.74 AT4G20070.1
AT4G20070.2
AAH
allantoate amidohydrolase
Chr2_-_19166949 0.73 AT2G46680.2
AT2G46680.1
HB-7
homeobox 7
Chr1_-_26770175 0.73 AT1G71000.1
AT1G71000.2
AT1G71000
Chaperone DnaJ-domain superfamily protein
Chr1_-_6152222 0.73 AT1G17870.1
EGY3
ethylene-dependent gravitropism-deficient and yellow-green-like 3
Chr3_-_4714698 0.73 AT3G14200.1
AT3G14200
Chaperone DnaJ-domain superfamily protein
Chr3_+_8918267 0.72 AT3G24500.1
MBF1C
multiprotein bridging factor 1C
Chr3_-_7463525 0.72 AT3G21250.1
AT3G21250.6
AT3G21250.5
AT3G21250.3
AT3G21250.2
AT3G21250.4
ABCC8
multidrug resistance-associated protein 6
Chr3_+_20189794 0.72 AT3G54540.1
AT3G54540.2
ABCF4
general control non-repressible 4
Chr3_-_19802328 0.72 AT3G53410.1
LUL2
RING/U-box superfamily protein
Chr3_+_5081780 0.72 AT3G15095.2
AT3G15095.1
AT3G15095.3
HCF243
Serine/Threonine-kinase pakA-like protein
Chr3_-_4762457 0.71 AT3G14280.1
AT3G14280
LL-diaminopimelate aminotransferase
Chr1_-_26434538 0.71 AT1G70200.1
AT1G70200
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_-_4679594 0.71 AT1G13640.2
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
Chr1_-_25176230 0.71 AT1G67265.1
RTFL21
ROTUNDIFOLIA like 21
Chr5_+_648648 0.70 AT5G02840.3
AT5G02840.1
AT5G02840.5
AT5G02840.2
AT5G02840.4
LCL1
LHY/CCA1-like 1
Chr1_-_4679862 0.69 AT1G13640.1
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
Chr3_+_11810726 0.69 AT3G30180.1
BR6OX2
brassinosteroid-6-oxidase 2
Chr5_+_17148808 0.69 AT5G42760.2
AT5G42760.1
AT5G42760
Leucine carboxyl methyltransferase
Chr5_-_24984044 0.69 AT5G62190.1
PRH75
DEAD box RNA helicase (PRH75)
Chr5_-_23501416 0.69 AT5G58070.1
TIL
temperature-induced lipocalin
Chr2_+_10244745 0.68 AT2G24100.1
ASG1
ATP-dependent DNA helicase
Chr1_+_3161832 0.68 AT1G09770.1
CDC5
cell division cycle 5
Chr2_+_11135624 0.68 AT2G26150.2
AT2G26150.1
AT2G26150.4
AT2G26150.3
HSFA2
heat shock transcription factor A2
Chr5_+_14968758 0.68 AT5G37670.1
AT5G37670
HSP20-like chaperones superfamily protein
Chr4_-_13709013 0.68 AT4G27410.3
RD26
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr1_-_1286619 0.68 AT1G04620.1
HCAR
coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family
Chr5_-_23117403 0.67 AT5G57110.3
AT5G57110.1
AT5G57110.2
ACA8
autoinhibited Ca2+ -ATPase, isoform 8
Chr5_-_21291928 0.67 AT5G52450.1
AT5G52450
MATE efflux family protein
Chr3_-_18684346 0.67 AT3G50370.1
AT3G50370.2
AT3G50370
hypothetical protein
Chr5_+_5995479 0.67 AT5G18130.2
AT5G18130
transmembrane protein
Chr5_+_8541558 0.67 AT5G24860.2
FPF1
flowering promoting factor 1
Chr5_+_105268 0.67 AT5G01260.3
AT5G01260.2
AT5G01260.1
AT5G01260
Carbohydrate-binding-like fold
Chr5_-_25676823 0.66 AT5G64170.1
AT5G64170.2
AT5G64170.3
AT5G64170
dentin sialophosphoprotein-like protein
Chr4_-_9779939 0.66 AT4G17550.1
G3Pp4
Major facilitator superfamily protein
Chr1_+_16847684 0.65 AT1G44414.1
AT1G44414
zinc-ribbon domain protein
Chr5_+_25040540 0.65 AT5G62360.1
AT5G62360
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_-_25976356 0.65 AT5G65030.1
AT5G65030
nitric oxide synthase-interacting protein
Chr4_-_12416691 0.65 AT4G23880.1
AT4G23880
hypothetical protein
Chr1_-_6283348 0.65 AT1G18265.1
AT1G18265
zein-binding protein (Protein of unknown function, DUF593)
Chr3_+_9352444 0.65 AT3G25690.4
AT3G25690.5
AT3G25690.6
CHUP1
Hydroxyproline-rich glycoprotein family protein
Chr4_-_17875201 0.65 AT4G38060.1
AT4G38060.3
AT4G38060.4
AT4G38060
hypothetical protein
Chr1_+_1706736 0.65 AT1G05690.1
BT3
BTB and TAZ domain protein 3
Chr5_+_26416126 0.64 AT5G66052.1
AT5G66052
transmembrane protein
Chr1_-_10548140 0.64 AT1G30070.2
AT1G30070.1
AT1G30070
SGS domain-containing protein
Chr5_+_4206738 0.64 AT5G13200.2
AT5G13200.1
AT5G13200
GRAM domain family protein
Chr4_-_8981829 0.64 AT4G15780.1
VAMP724
vesicle-associated membrane protein 724
Chr5_+_23524130 0.64 AT5G58140.7
AT5G58140.6
AT5G58140.1
PHOT2
phototropin 2
Chr2_-_15540139 0.64 AT2G36990.1
SIGF
RNApolymerase sigma-subunit F
Chr1_-_4855287 0.64 AT1G14200.1
AT1G14200
RING/U-box superfamily protein
Chr1_-_756303 0.64 AT1G03140.1
AT1G03140
splicing factor Prp18 family protein
Chr3_+_7595680 0.64 AT3G21560.1
UGT84A2
UDP-Glycosyltransferase superfamily protein
Chr1_-_26231375 0.64 AT1G69730.1
AT1G69730
Wall-associated kinase family protein
Chr1_+_2152798 0.64 AT1G07010.1
AT1G07010.2
AT1G07010.3
SLP1
Calcineurin-like metallo-phosphoesterase superfamily protein
Chr3_+_6313471 0.64 AT3G18390.1
EMB1865
CRS1 / YhbY (CRM) domain-containing protein
Chr1_-_11079240 0.64 AT1G31050.8
AT1G31050.7
AT1G31050.4
AT1G31050.6
AT1G31050.5
AT1G31050.3
AT1G31050.2
AT1G31050.1
AT1G31050
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_-_7876877 0.63 AT4G13550.2
AT4G13550.3
AT4G13550
putative triglyceride lipase
Chr4_+_8475101 0.63 AT4G14760.3
AT4G14760.1
NET1B
kinase interacting (KIP1-like) family protein
Chr1_+_10918267 0.63 AT1G30760.2
AT1G30760.1
AT1G30760
FAD-binding Berberine family protein
Chr1_+_23230922 0.63 AT1G62740.1
Hop2
stress-inducible protein
Chr4_-_13708861 0.63 AT4G27410.1
RD26
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr5_+_5995323 0.63 AT5G18130.1
AT5G18130
transmembrane protein
Chr5_-_5018347 0.62 AT5G15450.1
CLPB3
casein lytic proteinase B3
Chr5_+_7116687 0.62 AT5G20960.2
AO1
aldehyde oxidase 1
Chr5_-_25071111 0.62 AT5G62430.1
CDF1
cycling DOF factor 1
Chr3_+_22285138 0.62 AT3G60300.1
AT3G60300.2
AT3G60300
RWD domain-containing protein
Chr3_+_9353010 0.62 AT3G25690.2
AT3G25690.3
CHUP1
Hydroxyproline-rich glycoprotein family protein
Chr3_-_1652149 0.61 AT3G05660.1
RLP33
receptor like protein 33
Chr5_+_7116455 0.61 AT5G20960.1
AO1
aldehyde oxidase 1
Chr2_+_19204185 0.61 AT2G46735.1
AT2G46735
death domain associated protein
Chr4_+_7042354 0.61 AT4G11660.1
AT-HSFB2B
winged-helix DNA-binding transcription factor family protein
Chr1_-_1583446 0.61 AT1G05385.2
LPA19
photosystem II 11 kDa protein-like protein
Chr1_-_467873 0.61 AT1G02340.2
AT1G02340.1
HFR1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_26448938 0.61 AT5G66180.1
AT5G66180.2
AT5G66180.3
AT5G66180
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_4643747 0.61 AT4G07825.1
AT4G07825
transmembrane protein
Chr1_-_17683629 0.61 AT1G47960.1
AT1G47960.2
C/VIF1
cell wall / vacuolar inhibitor of fructosidase 1
Chr5_+_7103384 0.61 AT5G20935.1
AT5G20935.2
CRR42
DUF3148 family protein
Chr1_-_29147498 0.60 AT1G77580.1
AT1G77580.3
AT1G77580.4
AT1G77580.2
AT1G77580
filament-like protein (DUF869)
Chr5_+_23524487 0.60 AT5G58140.4
AT5G58140.3
PHOT2
phototropin 2
Chr4_-_13709170 0.60 AT4G27410.2
RD26
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr3_+_17427950 0.60 AT3G47295.1
AT3G47295
hypothetical protein
Chr5_-_18435469 0.60 AT5G45500.3
AT5G45500.6
AT5G45500.2
AT5G45500.9
AT5G45500.1
AT5G45500.4
AT5G45500.7
AT5G45500.8
AT5G45500.5
AT5G45500
RNI-like superfamily protein
Chr3_+_10330547 0.60 AT3G27870.1
AT3G27870.2
AT3G27870.3
AT3G27870
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr5_-_18763503 0.60 AT5G46260.1
AT5G46260
disease resistance protein (TIR-NBS-LRR class) family
Chr1_-_130570 0.60 AT1G01320.1
AT1G01320.3
AT1G01320.2
AT1G01320
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_21724642 0.60 AT5G53490.3
AT5G53490.2
AT5G53490.1
AT5G53490.4
AT5G53490
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_20479121 0.60 AT3G55250.1
PDE329
calcium homeostasis regulator
Chr1_+_19996205 0.60 AT1G53590.1
NTMC2T6.1
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr1_-_9092560 0.59 AT1G26270.1
AT1G26270
Phosphatidylinositol 3- and 4-kinase family protein
Chr2_+_13436485 0.59 AT2G31560.1
AT2G31560.3
AT2G31560.2
AT2G31560
signal transducer/transcription protein, putative (DUF1685)
Chr1_+_4351019 0.59 AT1G12770.1
AT1G12770.2
EMB1586
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_-_18626441 0.59 AT1G50280.1
AT1G50280.2
AT1G50280
Phototropic-responsive NPH3 family protein
Chr2_+_1682856 0.59 AT2G04795.1
AT2G04795
hypothetical protein
Chr5_+_4286740 0.59 AT5G13370.1
AT5G13370
Auxin-responsive GH3 family protein
Chr2_+_19065536 0.59 AT2G46450.1
AT2G46450.3
AT2G46450.4
AT2G46450.2
CNGC12
cyclic nucleotide-gated channel 12
Chr5_+_23523825 0.59 AT5G58140.2
AT5G58140.5
PHOT2
phototropin 2
Chr5_-_24738649 0.58 AT5G61510.2
AT5G61510
GroES-like zinc-binding alcohol dehydrogenase family protein
Chr4_-_17197247 0.58 AT4G36390.1
AT4G36390
Methylthiotransferase
Chr1_-_5265103 0.58 AT1G15290.2
AT1G15290.1
AT1G15290
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_4733225 0.58 AT5G14680.1
AT5G14680
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr5_-_24739002 0.58 AT5G61510.1
AT5G61510
GroES-like zinc-binding alcohol dehydrogenase family protein
Chr3_-_3025945 0.58 AT3G09850.1
AT3G09850
D111/G-patch domain-containing protein
Chr1_-_22417244 0.58 AT1G60890.2
AT1G60890.1
AT1G60890
Phosphatidylinositol-4-phosphate 5-kinase family protein
Chr2_+_417427 0.58 AT2G01910.2
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
Chr1_+_23952133 0.57 AT1G64490.1
AT1G64490
DEK, chromatin associated protein
Chr2_-_8206478 0.57 AT2G18940.1
AT2G18940
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_+_13192608 0.57 AT1G35660.1
AT1G35660
erythroid differentiation factor-like protein
Chr1_-_27940309 0.57 AT1G74310.1
AT1G74310.2
HSP101
heat shock protein 101
Chr5_+_8365601 0.57 AT5G24490.1
AT5G24490
30S ribosomal protein
Chr1_+_2672198 0.57 AT1G08460.1
AT1G08460.2
HDA08
histone deacetylase 8
Chr3_-_8285081 0.57 AT3G23210.1
AT3G23210.2
bHLH34
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr3_-_18898647 0.57 AT3G50840.3
AT3G50840.1
AT3G50840
Phototropic-responsive NPH3 family protein
Chr4_-_16942060 0.57 AT4G35750.1
AT4G35750
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Chr5_+_1602205 0.57 AT5G05410.2
AT5G05410.1
DREB2A
DRE-binding protein 2A
Chr1_+_4897346 0.57 AT1G14340.1
AT1G14340
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr3_-_9632009 0.56 AT3G26280.1
AT3G26280.2
CYP71B4
cytochrome P450, family 71, subfamily B, polypeptide 4

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G09735

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 0.6 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.5 2.6 GO:0019419 sulfate reduction(GO:0019419)
0.4 1.3 GO:0010203 response to very low fluence red light stimulus(GO:0010203)
0.4 2.5 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.4 1.5 GO:0000023 maltose metabolic process(GO:0000023)
0.4 1.8 GO:0010360 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.4 1.1 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.3 1.4 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.3 1.6 GO:0043279 response to caffeine(GO:0031000) response to alkaloid(GO:0043279)
0.3 1.6 GO:1901562 response to paraquat(GO:1901562)
0.3 0.3 GO:0075733 intracellular transport of virus(GO:0075733)
0.3 0.3 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.3 0.9 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.3 0.8 GO:0098532 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.3 0.3 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.3 0.8 GO:0035461 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.3 0.8 GO:0046705 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.2 0.7 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.2 0.7 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 1.2 GO:1902326 positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.2 0.7 GO:0071217 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.2 0.2 GO:0006499 N-terminal protein lipidation(GO:0006498) N-terminal protein myristoylation(GO:0006499) protein myristoylation(GO:0018377)
0.2 1.8 GO:0009061 anaerobic respiration(GO:0009061)
0.2 2.4 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.2 0.4 GO:0043954 cellular component maintenance(GO:0043954) chromatin maintenance(GO:0070827)
0.2 1.1 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.2 0.9 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.2 1.0 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.2 1.0 GO:0042550 photosystem I stabilization(GO:0042550)
0.2 0.8 GO:0080093 regulation of photorespiration(GO:0080093)
0.2 1.4 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.2 0.6 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.2 0.6 GO:0009663 plasmodesma organization(GO:0009663)
0.2 0.8 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.2 0.6 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.2 0.6 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.2 1.1 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.2 1.1 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.2 0.4 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.2 1.8 GO:0043462 regulation of ATPase activity(GO:0043462)
0.2 1.2 GO:0090059 protoxylem development(GO:0090059)
0.2 0.9 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.2 0.3 GO:1901334 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.2 1.7 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.2 1.7 GO:0010098 suspensor development(GO:0010098)
0.2 0.3 GO:0033306 phytol metabolic process(GO:0033306)
0.2 0.5 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.2 0.5 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.2 0.8 GO:0051098 regulation of binding(GO:0051098)
0.2 0.5 GO:1902586 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.2 0.5 GO:0032025 response to cobalt ion(GO:0032025)
0.2 1.5 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.2 2.4 GO:0048564 photosystem I assembly(GO:0048564)
0.2 0.6 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.2 0.9 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.1 0.4 GO:0071486 cellular response to high light intensity(GO:0071486)
0.1 0.7 GO:0010136 ureide metabolic process(GO:0010135) ureide catabolic process(GO:0010136)
0.1 4.7 GO:0006012 galactose metabolic process(GO:0006012)
0.1 0.4 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.1 0.3 GO:0016584 nucleosome positioning(GO:0016584)
0.1 0.1 GO:1900109 histone H3-K9 dimethylation(GO:0036123) regulation of histone H3-K9 dimethylation(GO:1900109)
0.1 0.4 GO:0010110 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.1 0.7 GO:0019323 pentose catabolic process(GO:0019323)
0.1 0.4 GO:0071569 protein ufmylation(GO:0071569)
0.1 0.6 GO:0048480 stigma development(GO:0048480)
0.1 0.4 GO:0042548 regulation of photosynthesis, light reaction(GO:0042548)
0.1 1.1 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.1 0.5 GO:0007032 endosome organization(GO:0007032)
0.1 0.4 GO:0042766 nucleosome mobilization(GO:0042766)
0.1 0.5 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 2.1 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.1 0.8 GO:0008614 pyridoxine metabolic process(GO:0008614)
0.1 0.8 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.1 0.1 GO:0045793 positive regulation of cell size(GO:0045793)
0.1 1.0 GO:0031936 negative regulation of chromatin silencing(GO:0031936)
0.1 0.4 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.1 0.5 GO:0035865 cellular response to potassium ion(GO:0035865)
0.1 0.4 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.1 0.6 GO:0010155 regulation of proton transport(GO:0010155)
0.1 0.2 GO:0051418 interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)
0.1 0.2 GO:0006883 cellular sodium ion homeostasis(GO:0006883)
0.1 0.5 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.1 0.1 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.1 0.4 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.1 0.5 GO:0031538 negative regulation of anthocyanin metabolic process(GO:0031538)
0.1 1.8 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 1.1 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.1 0.4 GO:0010198 synergid death(GO:0010198)
0.1 0.7 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.1 0.3 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.1 0.4 GO:0009584 detection of visible light(GO:0009584)
0.1 0.3 GO:0009915 phloem sucrose loading(GO:0009915)
0.1 0.2 GO:0000706 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.1 0.6 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056)
0.1 1.1 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 0.4 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.1 1.3 GO:2000144 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.1 0.3 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 3.3 GO:0051667 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.1 0.7 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.1 4.5 GO:0010286 heat acclimation(GO:0010286)
0.1 0.1 GO:0009745 sucrose mediated signaling(GO:0009745)
0.1 0.2 GO:0048358 mucilage pectin biosynthetic process(GO:0048358)
0.1 0.3 GO:0031054 pre-miRNA processing(GO:0031054)
0.1 2.3 GO:0010207 photosystem II assembly(GO:0010207)
0.1 0.3 GO:0000050 urea cycle(GO:0000050)
0.1 0.8 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 0.2 GO:0018023 peptidyl-lysine trimethylation(GO:0018023)
0.1 0.7 GO:0032204 regulation of telomere maintenance(GO:0032204)
0.1 1.0 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.1 0.8 GO:0043486 histone exchange(GO:0043486)
0.1 0.5 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.1 0.6 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.1 0.1 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.1 0.9 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 1.0 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1 0.4 GO:0071494 cellular response to UV-C(GO:0071494)
0.1 0.4 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 0.9 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.1 0.5 GO:0006968 cellular defense response(GO:0006968)
0.1 0.3 GO:0009996 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.1 0.4 GO:0000084 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.1 0.6 GO:0010508 positive regulation of autophagy(GO:0010508)
0.1 0.3 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.1 0.6 GO:0009803 cinnamic acid metabolic process(GO:0009803)
0.1 0.2 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.1 1.0 GO:0071333 cellular response to glucose stimulus(GO:0071333)
0.1 3.7 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.1 0.8 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.1 0.5 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.1 0.7 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.1 0.2 GO:0090342 regulation of cell aging(GO:0090342)
0.1 0.2 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 1.3 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 0.2 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
0.1 0.3 GO:0060145 leaf proximal/distal pattern formation(GO:0010589) viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 0.2 GO:0090143 nucleoid organization(GO:0090143)
0.1 0.1 GO:0051051 negative regulation of transport(GO:0051051)
0.1 0.4 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 0.2 GO:0010447 response to acidic pH(GO:0010447)
0.1 0.4 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.1 1.4 GO:0000373 Group II intron splicing(GO:0000373)
0.1 0.2 GO:1990884 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.1 0.2 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.1 0.8 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.1 0.5 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 2.2 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.1 1.4 GO:0016117 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.1 0.7 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380)
0.1 0.3 GO:0006898 receptor-mediated endocytosis(GO:0006898)
0.1 0.6 GO:0044375 regulation of peroxisome size(GO:0044375)
0.1 0.9 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.1 0.2 GO:0045694 regulation of embryo sac egg cell differentiation(GO:0045694)
0.1 1.0 GO:0010076 maintenance of floral meristem identity(GO:0010076)
0.1 0.4 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 0.2 GO:0009660 amyloplast organization(GO:0009660)
0.1 0.4 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.1 3.5 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.1 GO:0034626 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.1 0.5 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.1 0.2 GO:0080058 protein deglutathionylation(GO:0080058)
0.1 0.2 GO:0016110 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.1 1.8 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.1 0.4 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.1 0.3 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 3.0 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.1 1.8 GO:0042026 protein refolding(GO:0042026)
0.1 3.8 GO:0071489 cellular response to red or far red light(GO:0071489)
0.1 0.2 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.1 0.3 GO:0090065 regulation of production of siRNA involved in RNA interference(GO:0090065)
0.1 0.3 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 0.3 GO:0080026 response to indolebutyric acid(GO:0080026)
0.1 0.3 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.1 0.6 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.1 0.8 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.1 0.2 GO:1901656 glycoside transport(GO:1901656)
0.1 0.2 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.1 1.1 GO:0001708 cell fate specification(GO:0001708)
0.1 1.3 GO:0051084 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.1 0.9 GO:0010540 basipetal auxin transport(GO:0010540)
0.1 0.5 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.1 0.1 GO:0071481 cellular response to X-ray(GO:0071481)
0.1 0.2 GO:0043479 pigmentation(GO:0043473) pigment accumulation(GO:0043476) pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 0.2 GO:2000011 regulation of adaxial/abaxial pattern formation(GO:2000011)
0.1 0.7 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 1.5 GO:0032786 positive regulation of DNA-templated transcription, elongation(GO:0032786)
0.1 0.9 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.1 0.6 GO:0031935 regulation of chromatin silencing(GO:0031935)
0.1 0.2 GO:0043982 histone H4-K8 acetylation(GO:0043982)
0.1 0.1 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.1 0.9 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.1 0.3 GO:0006517 protein deglycosylation(GO:0006517)
0.1 0.2 GO:0006531 2-oxoglutarate metabolic process(GO:0006103) aspartate metabolic process(GO:0006531)
0.1 0.2 GO:0030638 polyketide metabolic process(GO:0030638)
0.1 0.7 GO:0000266 mitochondrial fission(GO:0000266)
0.1 2.8 GO:0009644 response to high light intensity(GO:0009644)
0.1 0.5 GO:0000132 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.1 0.5 GO:0033523 histone H2B ubiquitination(GO:0033523)
0.1 0.4 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 0.5 GO:0060866 leaf abscission(GO:0060866)
0.1 0.4 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.1 0.3 GO:0007041 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.1 0.2 GO:0046203 spermidine catabolic process(GO:0046203)
0.1 0.3 GO:0034508 centromere complex assembly(GO:0034508)
0.1 0.3 GO:0009957 epidermal cell fate specification(GO:0009957)
0.1 0.4 GO:0032973 amino acid export(GO:0032973) amino acid import(GO:0043090)
0.1 0.2 GO:0030100 regulation of endocytosis(GO:0030100)
0.1 0.4 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.1 0.2 GO:0015669 gas transport(GO:0015669)
0.1 0.5 GO:0009229 thiamine diphosphate biosynthetic process(GO:0009229) thiamine diphosphate metabolic process(GO:0042357)
0.1 0.2 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.1 0.5 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.1 0.3 GO:1904961 quiescent center organization(GO:1904961)
0.1 0.3 GO:0030242 pexophagy(GO:0030242)
0.1 0.3 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.1 0.2 GO:0090435 protein localization to nuclear envelope(GO:0090435)
0.1 0.6 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.1 0.2 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.1 0.3 GO:0006482 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.1 0.4 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.2 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.2 GO:1902916 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.0 1.0 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.0 0.4 GO:0010206 photosystem II repair(GO:0010206)
0.0 0.3 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.0 0.2 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.0 0.2 GO:0035305 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.0 0.1 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.0 0.2 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 1.0 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.4 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.0 0.0 GO:0050891 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.0 0.1 GO:0034476 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.0 0.2 GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion(GO:0006296)
0.0 0.1 GO:0019279 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.0 0.3 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.0 0.1 GO:2001294 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.0 0.3 GO:0051646 mitochondrion localization(GO:0051646)
0.0 0.1 GO:1901002 positive regulation of response to salt stress(GO:1901002)
0.0 0.6 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.0 0.6 GO:0010555 response to mannitol(GO:0010555)
0.0 0.3 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 0.7 GO:0097031 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.1 GO:0071277 cellular response to calcium ion(GO:0071277)
0.0 0.8 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.0 1.5 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.3 GO:0051127 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0 0.5 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.2 GO:0042391 regulation of membrane potential(GO:0042391)
0.0 0.1 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.0 0.1 GO:0006000 fructose metabolic process(GO:0006000)
0.0 1.0 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.2 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.0 0.1 GO:0009558 embryo sac cellularization(GO:0009558)
0.0 0.1 GO:0048478 DNA rewinding(GO:0036292) replication fork protection(GO:0048478)
0.0 0.1 GO:0042989 sequestering of actin monomers(GO:0042989)
0.0 0.2 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.0 0.1 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.0 0.1 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.0 0.2 GO:0080190 secondary growth(GO:0080117) lateral growth(GO:0080190)
0.0 0.2 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.0 2.2 GO:0009615 response to virus(GO:0009615)
0.0 0.5 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.3 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.0 0.2 GO:0016444 somatic cell DNA recombination(GO:0016444)
0.0 0.1 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.0 1.0 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.0 0.2 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.0 0.3 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.0 0.4 GO:0008544 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.0 0.1 GO:0048255 mRNA stabilization(GO:0048255)
0.0 0.2 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 0.2 GO:0007292 female gamete generation(GO:0007292) embryo sac egg cell differentiation(GO:0009560)
0.0 1.7 GO:0009827 plant-type cell wall modification(GO:0009827)
0.0 0.3 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.2 GO:0046464 neutral lipid catabolic process(GO:0046461) acylglycerol catabolic process(GO:0046464)
0.0 1.0 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.1 GO:0048200 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.0 0.2 GO:0006513 protein monoubiquitination(GO:0006513)
0.0 1.8 GO:0015994 chlorophyll metabolic process(GO:0015994)
0.0 0.3 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.0 0.1 GO:0072698 protein localization to cytoskeleton(GO:0044380) anisotropic cell growth(GO:0051211) protein localization to microtubule cytoskeleton(GO:0072698)
0.0 0.3 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.1 GO:0050685 positive regulation of RNA splicing(GO:0033120) positive regulation of mRNA processing(GO:0050685) positive regulation of mRNA metabolic process(GO:1903313)
0.0 0.1 GO:0033530 raffinose metabolic process(GO:0033530)
0.0 0.2 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.0 0.3 GO:1990069 stomatal opening(GO:1990069)
0.0 0.1 GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) histone arginine methylation(GO:0034969) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.0 0.1 GO:0001578 microtubule bundle formation(GO:0001578)
0.0 0.2 GO:2000038 regulation of stomatal complex development(GO:2000038)
0.0 0.1 GO:0032418 lysosome localization(GO:0032418)
0.0 0.2 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.0 0.5 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.7 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.2 GO:1901000 regulation of response to salt stress(GO:1901000)
0.0 0.9 GO:0006897 endocytosis(GO:0006897)
0.0 0.3 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.0 0.1 GO:1900369 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.0 0.3 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.6 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.0 0.3 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.6 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.7 GO:0006874 cellular calcium ion homeostasis(GO:0006874)
0.0 0.1 GO:0016598 protein arginylation(GO:0016598)
0.0 0.3 GO:0043967 histone H4 acetylation(GO:0043967)
0.0 0.2 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.0 0.1 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.1 GO:0071731 response to nitric oxide(GO:0071731)
0.0 0.1 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.0 0.2 GO:0006308 DNA catabolic process(GO:0006308)
0.0 0.4 GO:0005977 glycogen metabolic process(GO:0005977) energy reserve metabolic process(GO:0006112)
0.0 0.2 GO:0034614 cellular response to reactive oxygen species(GO:0034614)
0.0 0.4 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.1 GO:0046503 glycerolipid catabolic process(GO:0046503)
0.0 1.1 GO:0048481 plant ovule development(GO:0048481)
0.0 0.3 GO:0006102 isocitrate metabolic process(GO:0006102)
0.0 0.2 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.2 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.0 0.0 GO:0035970 peptidyl-threonine dephosphorylation(GO:0035970)
0.0 0.1 GO:0072387 FAD biosynthetic process(GO:0006747) FAD metabolic process(GO:0046443) flavin adenine dinucleotide metabolic process(GO:0072387) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.0 1.7 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.3 GO:0035196 production of miRNAs involved in gene silencing by miRNA(GO:0035196)
0.0 1.2 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.0 2.1 GO:0009909 regulation of flower development(GO:0009909)
0.0 0.3 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.1 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.0 0.0 GO:0032272 negative regulation of protein polymerization(GO:0032272)
0.0 0.6 GO:0009958 positive gravitropism(GO:0009958)
0.0 0.7 GO:0009637 response to blue light(GO:0009637)
0.0 0.4 GO:0015936 coenzyme A metabolic process(GO:0015936)
0.0 1.3 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.2 GO:0006526 arginine biosynthetic process(GO:0006526)
0.0 0.3 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 0.8 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.1 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.0 0.2 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 1.1 GO:0010029 regulation of seed germination(GO:0010029)
0.0 0.1 GO:0010375 stomatal complex patterning(GO:0010375)
0.0 0.1 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.1 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.0 0.1 GO:0010037 response to carbon dioxide(GO:0010037)
0.0 0.2 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.0 0.2 GO:0097369 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) inorganic cation import into cell(GO:0098659) sodium ion import across plasma membrane(GO:0098719) inorganic ion import into cell(GO:0099587) sodium ion import into cell(GO:1990118)
0.0 0.3 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.3 GO:0051260 protein homooligomerization(GO:0051260)
0.0 0.4 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.1 GO:0050665 hydrogen peroxide biosynthetic process(GO:0050665)
0.0 0.0 GO:0009120 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.0 1.0 GO:0006400 tRNA modification(GO:0006400)
0.0 0.2 GO:0070298 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.3 GO:0030042 actin filament depolymerization(GO:0030042)
0.0 0.5 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.0 0.1 GO:0060919 auxin influx(GO:0060919)
0.0 0.2 GO:0000002 mitochondrial genome maintenance(GO:0000002)
0.0 0.1 GO:0006624 vacuolar protein processing(GO:0006624)
0.0 0.2 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 1.0 GO:0042255 ribosome assembly(GO:0042255)
0.0 0.3 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.0 0.4 GO:0072666 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.0 0.1 GO:0007004 RNA-dependent DNA biosynthetic process(GO:0006278) telomere maintenance via telomerase(GO:0007004)
0.0 0.2 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.2 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.0 GO:0045833 negative regulation of lipid metabolic process(GO:0045833)
0.0 0.5 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.0 0.1 GO:0010067 procambium histogenesis(GO:0010067)
0.0 0.3 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.0 0.2 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.2 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.3 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.0 0.1 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.2 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.0 0.9 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.1 GO:0051814 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.6 GO:0006749 glutathione metabolic process(GO:0006749)
0.0 0.2 GO:0048571 long-day photoperiodism(GO:0048571) long-day photoperiodism, flowering(GO:0048574)
0.0 0.1 GO:0015846 polyamine transport(GO:0015846)
0.0 0.2 GO:0032365 intracellular lipid transport(GO:0032365)
0.0 0.2 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.0 0.1 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.0 0.2 GO:0010091 trichome branching(GO:0010091)
0.0 0.1 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.1 GO:0032507 maintenance of protein location in cell(GO:0032507) maintenance of protein location(GO:0045185)
0.0 0.2 GO:0031497 nucleosome assembly(GO:0006334) chromatin assembly(GO:0031497)
0.0 0.1 GO:0007008 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 0.2 GO:0010274 hydrotropism(GO:0010274)
0.0 0.1 GO:0019632 shikimate metabolic process(GO:0019632)
0.0 0.1 GO:0019405 alditol catabolic process(GO:0019405) glycerol catabolic process(GO:0019563)
0.0 0.3 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.0 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.0 0.2 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.0 0.1 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.0 0.2 GO:0002213 defense response to insect(GO:0002213)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.9 GO:0030132 clathrin coat of coated pit(GO:0030132)
0.2 1.1 GO:0009360 DNA polymerase III complex(GO:0009360)
0.2 0.9 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.2 0.5 GO:0005846 nuclear cap binding complex(GO:0005846)
0.1 0.6 GO:0032044 DSIF complex(GO:0032044)
0.1 0.6 GO:0032807 DNA ligase IV complex(GO:0032807)
0.1 1.1 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 0.4 GO:0030874 nucleolar chromatin(GO:0030874)
0.1 0.5 GO:0031515 tRNA (m1A) methyltransferase complex(GO:0031515)
0.1 1.0 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 0.8 GO:0089701 U2AF(GO:0089701)
0.1 0.4 GO:0000931 gamma-tubulin large complex(GO:0000931) gamma-tubulin ring complex(GO:0008274)
0.1 0.5 GO:0010007 magnesium chelatase complex(GO:0010007)
0.1 0.5 GO:0030286 dynein complex(GO:0030286)
0.1 0.7 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.1 0.8 GO:0000813 ESCRT I complex(GO:0000813)
0.1 1.1 GO:0000974 Prp19 complex(GO:0000974)
0.1 0.5 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 0.6 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.1 0.8 GO:0008023 transcription elongation factor complex(GO:0008023)
0.1 0.5 GO:0016363 nuclear matrix(GO:0016363)
0.1 0.3 GO:0033290 eukaryotic 48S preinitiation complex(GO:0033290)
0.1 0.5 GO:0071818 BAT3 complex(GO:0071818)
0.1 0.8 GO:0017119 Golgi transport complex(GO:0017119)
0.1 0.6 GO:0030897 HOPS complex(GO:0030897)
0.1 0.9 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.1 0.2 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.1 0.8 GO:0030665 clathrin vesicle coat(GO:0030125) clathrin-coated vesicle membrane(GO:0030665)
0.1 0.5 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 0.2 GO:0005682 U5 snRNP(GO:0005682)
0.1 0.4 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 0.2 GO:0034457 Mpp10 complex(GO:0034457)
0.1 1.0 GO:0034399 nuclear periphery(GO:0034399)
0.1 0.3 GO:0009509 chromoplast(GO:0009509)
0.1 0.2 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.1 0.6 GO:0010445 nuclear dicing body(GO:0010445)
0.1 1.0 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.1 0.5 GO:0009538 photosystem I reaction center(GO:0009538)
0.1 1.2 GO:0009574 preprophase band(GO:0009574)
0.1 0.3 GO:0034272 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.1 0.4 GO:0035145 exon-exon junction complex(GO:0035145)
0.1 0.1 GO:0000109 nucleotide-excision repair complex(GO:0000109)
0.1 1.0 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.1 0.7 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 0.2 GO:0071339 MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339)
0.1 3.6 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 0.6 GO:0005675 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.1 0.9 GO:0035097 histone methyltransferase complex(GO:0035097)
0.1 0.8 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.1 0.2 GO:0033281 TAT protein transport complex(GO:0033281)
0.1 1.4 GO:0005871 kinesin complex(GO:0005871)
0.1 0.9 GO:0033202 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.1 1.1 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 0.1 GO:0009528 plastid inner membrane(GO:0009528)
0.1 0.3 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.1 0.2 GO:0032153 cell division site(GO:0032153)
0.1 0.5 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 0.2 GO:0090397 stigma papilla(GO:0090397)
0.0 3.5 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.2 GO:0070505 pollen coat(GO:0070505)
0.0 1.1 GO:0055028 cortical microtubule(GO:0055028)
0.0 0.6 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 2.9 GO:0031969 chloroplast membrane(GO:0031969)
0.0 0.4 GO:0000346 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.0 0.2 GO:0005960 glycine cleavage complex(GO:0005960)
0.0 0.7 GO:0042651 thylakoid membrane(GO:0042651)
0.0 0.9 GO:0000229 cytoplasmic chromosome(GO:0000229) plastid chromosome(GO:0009508)
0.0 0.5 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 1.4 GO:0005643 nuclear pore(GO:0005643)
0.0 1.0 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.3 GO:0035619 root hair tip(GO:0035619)
0.0 1.9 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.0 1.8 GO:0016604 nuclear body(GO:0016604)
0.0 0.6 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 0.4 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.3 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.0 0.7 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.0 0.5 GO:0005769 early endosome(GO:0005769)
0.0 0.5 GO:0000786 nucleosome(GO:0000786)
0.0 0.3 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0 0.1 GO:0031931 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.0 0.1 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.0 0.1 GO:0055037 recycling endosome(GO:0055037)
0.0 0.3 GO:0008278 cohesin complex(GO:0008278)
0.0 0.6 GO:0000178 exosome (RNase complex)(GO:0000178)
0.0 0.1 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.1 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.0 0.1 GO:0005685 U1 snRNP(GO:0005685)
0.0 1.4 GO:0005635 nuclear envelope(GO:0005635)
0.0 0.2 GO:0031519 PcG protein complex(GO:0031519)
0.0 0.4 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 0.5 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.0 0.1 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.0 0.1 GO:0010319 stromule(GO:0010319)
0.0 3.3 GO:0044215 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 3.2 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.3 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.4 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.0 0.7 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.2 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.0 0.5 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.0 0.6 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.3 GO:0031209 SCAR complex(GO:0031209)
0.0 0.2 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.4 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.4 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.9 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.6 GO:0005875 microtubule associated complex(GO:0005875)
0.0 24.2 GO:0044434 chloroplast part(GO:0044434)
0.0 0.7 GO:0044452 nucleolar part(GO:0044452)
0.0 0.5 GO:0005761 mitochondrial ribosome(GO:0005761)
0.0 1.6 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.1 GO:0070847 core mediator complex(GO:0070847)
0.0 0.8 GO:0016592 mediator complex(GO:0016592)
0.0 0.1 GO:0097361 CIA complex(GO:0097361)
0.0 0.1 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.6 GO:0009524 phragmoplast(GO:0009524)
0.0 0.1 GO:0017053 transcriptional repressor complex(GO:0017053)
0.0 0.1 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.3 GO:0000124 SAGA complex(GO:0000124)
0.0 0.8 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.0 0.1 GO:0034657 GID complex(GO:0034657)
0.0 0.0 GO:0070461 SAGA-type complex(GO:0070461)
0.0 0.2 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.0 0.3 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.1 GO:0000938 GARP complex(GO:0000938)
0.0 0.1 GO:0000796 condensin complex(GO:0000796)
0.0 0.1 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.2 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.4 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.9 GO:0005681 spliceosomal complex(GO:0005681)
0.0 0.1 GO:0035861 site of double-strand break(GO:0035861)
0.0 0.1 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 0.0 GO:0034518 mRNA cap binding complex(GO:0005845) RNA cap binding complex(GO:0034518)
0.0 0.2 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.5 GO:0000502 proteasome complex(GO:0000502)
0.0 0.1 GO:0042575 DNA polymerase complex(GO:0042575)
0.0 0.1 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.0 0.3 GO:0009504 cell plate(GO:0009504)
0.0 0.1 GO:0043596 nuclear replication fork(GO:0043596)
0.0 3.1 GO:0005777 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 1.3 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 2.8 GO:0005730 nucleolus(GO:0005730)
0.0 0.3 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.1 GO:0009526 plastid envelope(GO:0009526)
0.0 0.1 GO:0030904 retromer complex(GO:0030904)
0.0 0.0 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.6 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.6 2.5 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.6 5.0 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.4 1.3 GO:0070678 preprotein binding(GO:0070678)
0.3 1.4 GO:0008301 DNA binding, bending(GO:0008301)
0.3 1.0 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.3 1.3 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.3 1.2 GO:0052595 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.3 0.9 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.3 1.7 GO:0030544 Hsp70 protein binding(GO:0030544)
0.3 0.8 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.3 1.1 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.3 0.8 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.3 0.5 GO:0046030 inositol trisphosphate phosphatase activity(GO:0046030) inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658)
0.3 0.8 GO:0090422 thiamine pyrophosphate transporter activity(GO:0090422)
0.3 2.8 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.3 0.8 GO:0052692 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.2 1.2 GO:0035197 siRNA binding(GO:0035197)
0.2 2.1 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.2 0.9 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.2 0.6 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.2 1.0 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.2 0.8 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.2 0.4 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.2 1.0 GO:0030371 translation repressor activity(GO:0030371)
0.2 0.6 GO:0030941 chloroplast targeting sequence binding(GO:0030941)
0.2 0.8 GO:0033862 UMP kinase activity(GO:0033862)
0.2 0.8 GO:0050815 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.2 0.5 GO:0000823 inositol-1,4,5-trisphosphate 6-kinase activity(GO:0000823) inositol tetrakisphosphate 3-kinase activity(GO:0000824) inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440) inositol tetrakisphosphate 5-kinase activity(GO:0047326)
0.2 1.3 GO:0017091 AU-rich element binding(GO:0017091)
0.2 2.0 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.2 2.6 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 1.3 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 1.6 GO:0016161 beta-amylase activity(GO:0016161)
0.1 0.7 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.1 1.1 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 1.5 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 0.5 GO:0016429 tRNA (adenine-N1-)-methyltransferase activity(GO:0016429)
0.1 0.5 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.1 0.4 GO:0070336 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.1 0.5 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.1 0.8 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.1 0.5 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.1 0.6 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 0.6 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 0.1 GO:0070628 proteasome binding(GO:0070628)
0.1 0.8 GO:0008022 protein C-terminus binding(GO:0008022)
0.1 0.7 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.1 0.3 GO:0019003 GDP binding(GO:0019003)
0.1 0.4 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.1 0.4 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.1 1.2 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.1 0.5 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 1.2 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 0.4 GO:0097157 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
0.1 1.6 GO:0036002 pre-mRNA binding(GO:0036002)
0.1 0.3 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.1 0.5 GO:0045502 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.1 1.4 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 0.4 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.1 0.5 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.1 1.1 GO:0051879 Hsp90 protein binding(GO:0051879)
0.1 0.3 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.1 0.5 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.1 0.6 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.9 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.4 GO:0070492 oligosaccharide binding(GO:0070492)
0.1 0.3 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.1 0.3 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 0.2 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.2 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.1 0.2 GO:0019137 thioglucosidase activity(GO:0019137)
0.1 0.6 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 1.1 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.2 GO:0004775 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.1 0.5 GO:0000990 transcription factor activity, core RNA polymerase binding(GO:0000990)
0.1 0.2 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.1 1.5 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.5 GO:0051002 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.1 0.5 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 0.2 GO:0016642 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.1 0.5 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.1 0.3 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.1 0.7 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 1.0 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 0.4 GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor(GO:0016731)
0.1 0.7 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 1.7 GO:0030276 clathrin binding(GO:0030276)
0.1 0.3 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.1 0.5 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.1 0.2 GO:0035671 enone reductase activity(GO:0035671)
0.1 0.3 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.1 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.1 0.3 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 1.2 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.1 0.7 GO:2001070 starch binding(GO:2001070)
0.1 0.2 GO:0008428 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.1 0.2 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.1 1.2 GO:0008536 Ran GTPase binding(GO:0008536)
0.1 0.2 GO:0016643 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.1 0.7 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.1 0.4 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.1 0.4 GO:0015645 fatty acid ligase activity(GO:0015645)
0.1 1.0 GO:0031491 nucleosome binding(GO:0031491)
0.1 0.3 GO:0047714 galactolipase activity(GO:0047714)
0.1 0.2 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.1 0.4 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.9 GO:0004629 phospholipase C activity(GO:0004629)
0.1 0.3 GO:0004594 pantothenate kinase activity(GO:0004594)
0.1 0.4 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266) phosphatidylinositol-3,5-bisphosphate binding(GO:0080025)
0.1 0.4 GO:0016151 nickel cation binding(GO:0016151)
0.1 0.4 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 1.0 GO:0035064 methylated histone binding(GO:0035064)
0.1 0.2 GO:0016728 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.1 0.4 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.1 0.4 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.3 GO:0030267 glyoxylate reductase (NADP) activity(GO:0030267)
0.1 1.6 GO:0031072 heat shock protein binding(GO:0031072)
0.1 4.7 GO:0003724 RNA helicase activity(GO:0003724)
0.1 0.9 GO:0051117 ATPase binding(GO:0051117)
0.1 0.6 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.9 GO:0001098 RNA polymerase II core binding(GO:0000993) basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099) RNA polymerase core enzyme binding(GO:0043175)
0.1 0.3 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.1 0.8 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.3 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.1 0.4 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 0.3 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.1 0.3 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.2 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.1 0.2 GO:0008821 crossover junction endodeoxyribonuclease activity(GO:0008821)
0.1 0.2 GO:0004298 threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.1 0.4 GO:0004567 beta-mannosidase activity(GO:0004567)
0.1 2.8 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 0.5 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.1 0.5 GO:0035198 miRNA binding(GO:0035198)
0.1 0.4 GO:0102360 flavonol 3-O-glucosyltransferase activity(GO:0047893) daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.1 0.6 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.1 0.3 GO:0005223 intracellular cGMP activated cation channel activity(GO:0005223)
0.1 0.2 GO:0017070 U6 snRNA binding(GO:0017070)
0.1 0.2 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.1 0.7 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.1 0.4 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.0 0.5 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 0.2 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.0 0.1 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.0 0.5 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.0 0.7 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.9 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.4 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 1.0 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 6.0 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.2 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.0 2.2 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.4 GO:0004096 catalase activity(GO:0004096)
0.0 0.2 GO:0070063 RNA polymerase binding(GO:0070063)
0.0 0.2 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.0 2.9 GO:0042393 histone binding(GO:0042393)
0.0 0.5 GO:0051787 misfolded protein binding(GO:0051787)
0.0 1.1 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.3 GO:0015391 nucleobase:cation symporter activity(GO:0015391)
0.0 0.4 GO:0016775 protein histidine kinase activity(GO:0004673) phosphotransferase activity, nitrogenous group as acceptor(GO:0016775)
0.0 2.7 GO:0051082 unfolded protein binding(GO:0051082)
0.0 1.8 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.3 GO:0047627 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.0 1.3 GO:0051087 chaperone binding(GO:0051087)
0.0 0.1 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.0 0.8 GO:0008266 poly(U) RNA binding(GO:0008266)
0.0 0.1 GO:0047661 racemase and epimerase activity, acting on amino acids and derivatives(GO:0016855) racemase activity, acting on amino acids and derivatives(GO:0036361) amino-acid racemase activity(GO:0047661)
0.0 0.1 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.0 0.1 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.0 0.5 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.2 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 0.6 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.4 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.3 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.4 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.3 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.0 0.4 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.3 GO:0004300 enoyl-CoA hydratase activity(GO:0004300)
0.0 0.5 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.1 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.0 0.2 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.2 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.0 0.3 GO:0051011 microtubule minus-end binding(GO:0051011)
0.0 0.1 GO:0003785 actin monomer binding(GO:0003785)
0.0 1.5 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.2 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.1 GO:0052742 phosphatidylinositol kinase activity(GO:0052742)
0.0 0.4 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.7 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.1 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.0 0.2 GO:0008199 ferric iron binding(GO:0008199)
0.0 0.2 GO:0032029 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.0 0.2 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.7 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.1 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.0 0.1 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.2 GO:0052853 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.0 0.6 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.4 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.2 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 0.4 GO:0019210 kinase inhibitor activity(GO:0019210)
0.0 0.3 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.4 GO:0008312 7S RNA binding(GO:0008312)
0.0 0.1 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.4 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.2 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.1 GO:0097472 cyclin-dependent protein serine/threonine kinase activity(GO:0004693) cyclin-dependent protein kinase activity(GO:0097472)
0.0 1.9 GO:0000988 transcription factor activity, protein binding(GO:0000988) transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 1.7 GO:0043130 ubiquitin binding(GO:0043130)
0.0 0.1 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.0 0.2 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.0 0.2 GO:0000014 single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.0 0.3 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 1.0 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 2.7 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 1.0 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.1 GO:0004001 adenosine kinase activity(GO:0004001)
0.0 0.1 GO:0004057 arginyltransferase activity(GO:0004057)
0.0 0.3 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.7 GO:0016782 transferase activity, transferring sulfur-containing groups(GO:0016782)
0.0 0.4 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 1.3 GO:0005096 GTPase activator activity(GO:0005096)
0.0 0.1 GO:0010313 phytochrome binding(GO:0010313)
0.0 0.1 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.0 0.2 GO:0004520 endodeoxyribonuclease activity(GO:0004520)
0.0 0.1 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.2 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 1.2 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 3.3 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 0.1 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.0 0.2 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.1 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.0 0.2 GO:0060590 ATPase regulator activity(GO:0060590)
0.0 0.7 GO:0008422 beta-glucosidase activity(GO:0008422)
0.0 0.7 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.3 GO:0005217 intracellular ligand-gated ion channel activity(GO:0005217) glutamate receptor activity(GO:0008066)
0.0 0.1 GO:0000213 tRNA-intron endonuclease activity(GO:0000213)
0.0 0.4 GO:0051536 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 0.3 GO:0060090 binding, bridging(GO:0060090)
0.0 3.4 GO:0043531 ADP binding(GO:0043531)
0.0 0.1 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 0.1 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.4 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.1 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.4 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.4 GO:0003684 damaged DNA binding(GO:0003684)
0.0 0.1 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.0 0.2 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.0 0.1 GO:0016273 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.5 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.0 GO:0004127 cytidylate kinase activity(GO:0004127)
0.0 0.0 GO:0003996 acyl-CoA ligase activity(GO:0003996)
0.0 0.1 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.1 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.0 0.1 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 0.1 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.0 0.1 GO:0004765 shikimate kinase activity(GO:0004765)
0.0 0.5 GO:0003727 single-stranded RNA binding(GO:0003727)
0.0 0.5 GO:0001871 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.1 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.1 GO:0010011 auxin binding(GO:0010011)
0.0 0.1 GO:0004526 ribonuclease P activity(GO:0004526) tRNA-specific ribonuclease activity(GO:0004549)
0.0 0.6 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 3.3 GO:0019787 ubiquitin-like protein transferase activity(GO:0019787)
0.0 0.0 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.0 0.1 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.3 GO:0019887 protein kinase regulator activity(GO:0019887)
0.0 0.2 GO:0061733 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.0 0.0 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 2.4 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 1.5 GO:0015631 tubulin binding(GO:0015631)
0.0 0.0 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.0 0.1 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.0 0.2 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.2 GO:0031386 protein tag(GO:0031386)
0.0 0.0 GO:0000215 tRNA 2'-phosphotransferase activity(GO:0000215) 2'-phosphotransferase activity(GO:0008665)
0.0 0.1 GO:0008506 sucrose:proton symporter activity(GO:0008506)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.1 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.2 0.7 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.2 1.3 NABA CORE MATRISOME Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans
0.2 0.3 PID TCPTP PATHWAY Signaling events mediated by TCPTP
0.2 0.6 PID S1P S1P1 PATHWAY S1P1 pathway
0.1 0.4 SIG CHEMOTAXIS Genes related to chemotaxis
0.1 0.3 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.1 0.4 PID P53 REGULATION PATHWAY p53 pathway
0.1 0.4 PID ATF2 PATHWAY ATF-2 transcription factor network
0.1 0.3 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.1 0.4 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.1 0.5 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.1 PID IL4 2PATHWAY IL4-mediated signaling events
0.0 0.0 ST ERK1 ERK2 MAPK PATHWAY ERK1/ERK2 MAPK Pathway
0.0 0.4 PID RAC1 PATHWAY RAC1 signaling pathway
0.0 0.3 PID E2F PATHWAY E2F transcription factor network
0.0 0.1 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.0 0.0 PID PDGFRA PATHWAY PDGFR-alpha signaling pathway
0.0 0.0 PID VEGFR1 2 PATHWAY Signaling events mediated by VEGFR1 and VEGFR2

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.4 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 7ALPHA HYDROXYCHOLESTEROL Genes involved in Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
0.2 0.7 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.2 0.5 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.1 0.4 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.1 0.6 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.1 0.4 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.1 0.8 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.1 0.4 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.1 0.7 REACTOME HOST INTERACTIONS OF HIV FACTORS Genes involved in Host Interactions of HIV factors
0.1 0.5 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.1 0.3 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.1 0.4 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 0.6 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.1 0.2 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.1 0.2 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.0 0.1 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.0 1.0 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins
0.0 0.1 REACTOME REGULATION OF KIT SIGNALING Genes involved in Regulation of KIT signaling
0.0 0.2 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.0 0.0 REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT Genes involved in Transport of Mature mRNA Derived from an Intronless Transcript
0.0 1.0 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.0 0.0 REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA Genes involved in Processing of Capped Intron-Containing Pre-mRNA
0.0 0.1 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.0 0.3 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production