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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT3G03200

Z-value: 1.01

Transcription factors associated with AT3G03200

Gene Symbol Gene ID Gene Info
AT3G03200
AT3G03200 NAC domain containing protein 45

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC045arTal_v1_Chr3_-_738629_738629-0.352.2e-01Click!

Activity profile of AT3G03200 motif

Sorted Z-values of AT3G03200 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_+_7845923 1.69 AT2G18050.2
AT2G18050.1
HIS1-3
histone H1-3
Chr2_-_15421866 1.25 AT2G36790.1
UGT73C6
UDP-glucosyl transferase 73C6
Chr3_+_4729399 1.18 AT3G14210.1
AT3G14210.2
ESM1
GDSL-like lipase/acylhydrolase superfamily protein
Chr3_-_2699257 1.10 AT3G08860.2
PYD4
PYRIMIDINE 4
Chr3_-_2699420 1.09 AT3G08860.1
PYD4
PYRIMIDINE 4
Chr4_+_11150049 0.99 AT4G20820.1
AT4G20820
FAD-binding Berberine family protein
Chr3_+_8918679 0.98 AT3G24500.2
MBF1C
multiprotein bridging factor 1C
Chr1_+_24472873 0.98 AT1G65800.1
AT1G65800.2
RK2
receptor kinase 2
Chr2_-_7919345 0.95 AT2G18193.1
AT2G18193
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_-_15412064 0.95 AT2G36750.1
UGT73C1
UDP-glucosyl transferase 73C1
Chr2_-_8850111 0.94 AT2G20560.1
AT2G20560
DNAJ heat shock family protein
Chr3_+_8918267 0.93 AT3G24500.1
MBF1C
multiprotein bridging factor 1C
Chr2_+_16216752 0.90 AT2G38800.1
AT2G38800
Plant calmodulin-binding protein-like protein
Chr4_+_7887440 0.90 AT4G13572.1
AT4G13572
hypothetical protein
Chr5_+_21352557 0.87 AT5G52640.1
HSP90.1
heat shock-like protein
Chr2_-_1339468 0.87 AT2G04050.1
AT2G04050
MATE efflux family protein
Chr1_+_8395466 0.86 AT1G23730.2
AT1G23730.1
BCA3
beta carbonic anhydrase 3
Chr3_-_3993886 0.84 AT3G12580.1
HSP70
heat shock protein 70
Chr3_-_9634470 0.84 AT3G26290.1
CYP71B26
cytochrome P450, family 71, subfamily B, polypeptide 26
Chr4_+_2189515 0.83 AT4G04410.1
AT4G04410

Chr5_-_19693845 0.82 AT5G48570.1
AT5G48570
FKBP-type peptidyl-prolyl cis-trans isomerase family protein
Chr3_-_9634822 0.81 AT3G26290.2
CYP71B26
cytochrome P450, family 71, subfamily B, polypeptide 26
Chr5_-_4430901 0.80 AT5G13730.1
SIG4
sigma factor 4
Chr1_-_6152222 0.79 AT1G17870.1
EGY3
ethylene-dependent gravitropism-deficient and yellow-green-like 3
Chr1_-_26770175 0.78 AT1G71000.1
AT1G71000.2
AT1G71000
Chaperone DnaJ-domain superfamily protein
Chr3_+_7906521 0.78 AT3G22370.1
AOX1A
alternative oxidase 1A
Chr1_-_27994178 0.78 AT1G74480.1
RKD2
RWP-RK domain-containing protein
Chr2_+_9254378 0.78 AT2G21640.1
AT2G21640
marker for oxidative stress response protein
Chr2_-_10702203 0.77 AT2G25140.1
CLPB4
casein lytic proteinase B4
Chr2_-_8370675 0.76 AT2G19310.1
AT2G19310
HSP20-like chaperones superfamily protein
Chr3_+_9758797 0.75 AT3G26580.1
AT3G26580
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_+_12588191 0.75 AT2G29300.2
AT2G29300.1
AT2G29300
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_8200321 0.75 AT1G23130.1
AT1G23130
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr2_-_18811085 0.74 AT2G45660.2
AT2G45660.1
AGL20
AGAMOUS-like 20
Chr4_-_10591546 0.74 AT4G19420.3
AT4G19420.2
AT4G19420.1
AT4G19420
Pectinacetylesterase family protein
Chr4_+_15202288 0.74 AT4G31330.1
AT4G31330
transmembrane protein, putative (Protein of unknown function, DUF599)
Chr5_-_20720681 0.73 AT5G50920.1
CLPC1
CLPC homologue 1
Chr2_+_12326808 0.73 AT2G28720.1
AT2G28720
Histone superfamily protein
Chr3_-_17133462 0.71 AT3G46530.1
RPP13
NB-ARC domain-containing disease resistance protein
Chr4_+_8360996 0.71 AT4G14560.1
IAA1
indole-3-acetic acid inducible
Chr5_-_23308680 0.71 AT5G57560.1
TCH4
Xyloglucan endotransglucosylase/hydrolase family protein
Chr5_-_17888530 0.70 AT5G44400.1
AT5G44400
FAD-binding Berberine family protein
Chr4_-_11659105 0.70 AT4G21990.1
AT4G21990.2
APR3
APS reductase 3
Chr5_-_23230749 0.70 AT5G57345.1
AT5G57345
transmembrane protein
Chr4_+_17646408 0.70 AT4G37560.1
AT4G37560.2
AT4G37560
Acetamidase/Formamidase family protein
Chr4_+_10481619 0.69 AT4G19170.1
NCED4
nine-cis-epoxycarotenoid dioxygenase 4
Chr5_+_16815310 0.69 AT5G42050.1
AT5G42050
DCD (Development and Cell Death) domain protein
Chr3_+_16818347 0.69 AT3G45780.2
PHOT1
phototropin 1
Chr5_+_20415764 0.69 AT5G50160.1
AT5G50160.2
FRO8
ferric reduction oxidase 8
Chr4_+_13828422 0.69 AT4G27710.2
CYP709B3
cytochrome P450, family 709, subfamily B, polypeptide 3
Chr4_+_13828189 0.69 AT4G27710.1
CYP709B3
cytochrome P450, family 709, subfamily B, polypeptide 3
Chr2_+_10379948 0.68 AT2G24420.1
AT2G24420.2
AT2G24420
DNA repair ATPase-like protein
Chr3_-_21008064 0.68 AT3G56710.1
AT3G56710.2
SIB1
sigma factor binding protein 1
Chr1_-_1704838 0.68 AT1G05680.1
UGT74E2
Uridine diphosphate glycosyltransferase 74E2
Chr3_+_16816721 0.68 AT3G45780.1
PHOT1
phototropin 1
Chr1_-_21235292 0.67 AT1G56650.1
PAP1
production of anthocyanin pigment 1
Chr3_-_1763348 0.67 AT3G05900.2
AT3G05900
neurofilament protein-like protein
Chr5_-_17458800 0.67 AT5G43450.2
AT5G43450
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_+_5946448 0.67 AT1G17360.1
AT1G17360
LOW protein: protein phosphatase 1 regulatory subunit-like protein
Chr3_+_17228642 0.67 AT3G46780.1
PTAC16
plastid transcriptionally active 16
Chr4_+_9171280 0.67 AT4G16190.1
AT4G16190
Papain family cysteine protease
Chr5_-_17458980 0.66 AT5G43450.1
AT5G43450
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_+_16727530 0.66 AT5G41790.1
CIP1
COP1-interactive protein 1
Chr1_+_24824356 0.65 AT1G66540.1
AT1G66540.2
AT1G66540
Cytochrome P450 superfamily protein
Chr5_+_16579936 0.65 AT5G41410.1
BEL1
POX (plant homeobox) family protein
Chr1_-_3590928 0.65 AT1G10760.1
AT1G10760.3
SEX1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein
Chr1_-_29147498 0.65 AT1G77580.1
AT1G77580.3
AT1G77580.4
AT1G77580.2
AT1G77580
filament-like protein (DUF869)
Chr3_-_5358427 0.65 AT3G15840.4
AT3G15840.2
AT3G15840.3
AT3G15840.5
AT3G15840.1
PIFI
post-illumination chlorophyll fluorescence increase
Chr5_+_5649057 0.64 AT5G17170.1
AT5G17170.2
ENH1
rubredoxin family protein
Chr3_+_15660770 0.64 AT3G43800.1
GSTU27
glutathione S-transferase tau 27
Chr4_-_7494234 0.64 AT4G12735.1
AT4G12735
hypothetical protein
Chr4_-_13958107 0.64 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_-_5433851 0.64 AT3G16000.1
MFP1
MAR binding filament-like protein 1
Chr5_+_5995479 0.64 AT5G18130.2
AT5G18130
transmembrane protein
Chr5_-_23085246 0.64 AT5G57040.1
AT5G57040
Lactoylglutathione lyase / glyoxalase I family protein
Chr3_-_3282131 0.63 AT3G10525.1
LGO
LOSS OF GIANT CELLS FROM ORGANS
Chr2_-_19166949 0.63 AT2G46680.2
AT2G46680.1
HB-7
homeobox 7
Chr2_-_13211188 0.63 AT2G31040.1
AT2G31040
ATP synthase protein I-like protein
Chr5_+_23734273 0.62 AT5G58770.1
cPT4
Undecaprenyl pyrophosphate synthetase family protein
Chr5_+_5995323 0.62 AT5G18130.1
AT5G18130
transmembrane protein
Chr4_+_8010967 0.62 AT4G13830.2
AT4G13830.3
J20
DNAJ-like 20
Chr3_-_826585 0.62 AT3G03470.1
CYP89A9
cytochrome P450, family 87, subfamily A, polypeptide 9
Chr3_+_9827682 0.62 AT3G26740.1
CCL
CCR-like protein
Chr3_-_9632009 0.62 AT3G26280.1
AT3G26280.2
CYP71B4
cytochrome P450, family 71, subfamily B, polypeptide 4
Chr4_+_2445775 0.61 AT4G04830.1
AT4G04830.2
MSRB5
methionine sulfoxide reductase B5
Chr1_-_22977625 0.61 AT1G62180.2
APR2
5'adenylylphosphosulfate reductase 2
Chr1_-_23818481 0.61 AT1G64170.1
CHX16
cation/H+ exchanger 16
Chr3_+_22804998 0.61 AT3G61630.1
CRF6
cytokinin response factor 6
Chr3_+_23090944 0.60 AT3G62410.1
CP12-2
CP12 domain-containing protein 2
Chr1_-_22977885 0.60 AT1G62180.1
APR2
5'adenylylphosphosulfate reductase 2
Chr1_+_4461738 0.60 AT1G13090.1
AT1G13090.2
CYP71B28
cytochrome P450, family 71, subfamily B, polypeptide 28
Chr1_+_23650840 0.60 AT1G63750.3
AT1G63750.2
AT1G63750.1
AT1G63750
Disease resistance protein (TIR-NBS-LRR class) family
Chr4_-_10590700 0.59 AT4G19420.4
AT4G19420
Pectinacetylesterase family protein
Chr1_+_18934299 0.59 AT1G51100.1
CRR41
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein
Chr1_-_3590701 0.59 AT1G10760.2
SEX1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein
Chr1_+_20525654 0.59 AT1G55020.1
LOX1
lipoxygenase 1
Chr4_-_8854706 0.59 AT4G15490.1
UGT84A3
UDP-Glycosyltransferase superfamily protein
Chr3_-_1832190 0.59 AT3G06070.1
AT3G06070
hypothetical protein
Chr4_+_8011183 0.59 AT4G13830.1
J20
DNAJ-like 20
Chr3_+_9352444 0.59 AT3G25690.4
AT3G25690.5
AT3G25690.6
CHUP1
Hydroxyproline-rich glycoprotein family protein
Chr4_-_5932475 0.58 AT4G09350.1
NdhT
Chaperone DnaJ-domain superfamily protein
Chr4_+_418327 0.58 AT4G00970.1
AT4G00970.2
CRK41
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Chr3_-_1523889 0.58 AT3G05345.1
AT3G05345
Chaperone DnaJ-domain superfamily protein
Chr4_-_17835017 0.58 AT4G37930.1
SHM1
serine transhydroxymethyltransferase 1
Chr2_-_9454270 0.58 AT2G22240.3
AT2G22240.1
MIPS2
myo-inositol-1-phosphate synthase 2
Chr1_-_11740399 0.58 AT1G32470.1
AT1G32470
Single hybrid motif superfamily protein
Chr2_-_15314807 0.58 AT2G36490.1
DML1
demeter-like 1
Chr4_-_8007578 0.57 AT4G13810.3
AT4G13810.1
AT4G13810.2
RLP47
receptor like protein 47
Chr4_-_7686873 0.57 AT4G13250.2
AT4G13250.1
NYC1
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_7168106 0.57 AT5G21100.1
AT5G21100
Plant L-ascorbate oxidase
Chr5_-_22429495 0.57 AT5G55300.3
AT5G55300.2
AT5G55300.1
TOP1ALPHA
DNA topoisomerase I alpha
Chr1_+_7823066 0.57 AT1G22160.1
AT1G22160
senescence-associated family protein (DUF581)
Chr3_-_16096414 0.56 AT3G44480.2
AT3G44480.5
AT3G44480.1
AT3G44480.3
AT3G44480.4
RPP1
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_-_6860376 0.56 AT1G19835.1
AT1G19835.4
AT1G19835.6
AT1G19835.3
AT1G19835
filament-like protein (DUF869)
Chr1_+_1164910 0.56 AT1G04350.1
AT1G04350
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_-_1647147 0.56 AT1G05560.1
UGT75B1
UDP-glucosyltransferase 75B1
Chr1_+_26452847 0.56 AT1G70250.1
AT1G70250
receptor serine/threonine kinase
Chr3_+_9353010 0.56 AT3G25690.2
AT3G25690.3
CHUP1
Hydroxyproline-rich glycoprotein family protein
Chr1_-_28194068 0.56 AT1G75100.1
JAC1
J-domain protein required for chloroplast accumulation response 1
Chr5_+_3193017 0.56 AT5G10180.1
SULTR2%3B1
slufate transporter 2;1
Chr3_-_22907958 0.56 AT3G61880.1
AT3G61880.2
CYP78A9
cytochrome p450 78a9
Chr1_-_19458069 0.56 AT1G52240.1
ROPGEF11
rop guanine nucleotide exchange factor-like protein
Chr1_-_25911108 0.55 AT1G68910.2
AT1G68910.1
WIT2
WPP domain-interacting protein 2
Chr1_+_7612834 0.55 AT1G21680.1
AT1G21680
DPP6 N-terminal domain-like protein
Chr5_+_25524045 0.55 AT5G63780.2
SHA1
RING/FYVE/PHD zinc finger superfamily protein
Chr5_+_25523827 0.55 AT5G63780.1
SHA1
RING/FYVE/PHD zinc finger superfamily protein
Chr1_-_8711578 0.55 AT1G24575.1
AT1G24575
DEAD-box ATP-dependent RNA helicase-like protein
Chr1_+_15976805 0.55 AT1G42550.1
PMI1
plastid movement impaired1
Chr1_-_9864779 0.55 AT1G28230.1
PUP1
purine permease 1
Chr2_-_1149261 0.54 AT2G03750.1
AT2G03750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_-_11850436 0.54 AT4G22490.1
AT4G22490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_9879275 0.54 AT2G23200.1
AT2G23200
Protein kinase superfamily protein
Chr2_-_9454094 0.54 AT2G22240.2
MIPS2
myo-inositol-1-phosphate synthase 2
Chr3_-_399798 0.54 AT3G02170.2
AT3G02170.3
LNG2
longifolia2
Chr1_-_9286395 0.54 AT1G26800.1
AT1G26800
RING/U-box superfamily protein
Chr5_+_18138775 0.54 AT5G44920.2
AT5G44920.1
AT5G44920
Toll-Interleukin-Resistance (TIR) domain family protein
Chr3_-_5271984 0.54 AT3G15570.1
AT3G15570
Phototropic-responsive NPH3 family protein
Chr5_+_2569098 0.54 AT5G08010.1
AT5G08010
hypothetical protein
Chr1_-_1647435 0.53 AT1G05560.2
UGT75B1
UDP-glucosyltransferase 75B1
Chr5_+_25679425 0.53 AT5G64190.2
AT5G64190.1
AT5G64190
neuronal PAS domain protein
Chr4_-_468294 0.53 AT4G01080.1
TBL26
TRICHOME BIREFRINGENCE-LIKE 26
Chr1_+_1706736 0.53 AT1G05690.1
BT3
BTB and TAZ domain protein 3
Chr3_+_6089381 0.53 AT3G17790.1
PAP17
purple acid phosphatase 17
Chr3_-_1763984 0.53 AT3G05900.1
AT3G05900
neurofilament protein-like protein
Chr2_-_11806087 0.53 AT2G27680.1
AT2G27680
NAD(P)-linked oxidoreductase superfamily protein
Chr2_+_1679307 0.53 AT2G04790.10
AT2G04790.6
AT2G04790.5
AT2G04790.7
AT2G04790.9
AT2G04790.8
AT2G04790.13
AT2G04790.12
AT2G04790.11
AT2G04790.14
AT2G04790.15
AT2G04790.16
AT2G04790.4
AT2G04790.3
AT2G04790.1
AT2G04790.2
AT2G04790
PTB domain engulfment adapter
Chr1_+_28253890 0.52 AT1G75290.1
AT1G75290
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_-_10325816 0.52 AT4G18810.2
AT4G18810.1
AT4G18810
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_24967574 0.52 AT1G66920.1
AT1G66920.2
AT1G66920.3
AT1G66920
Protein kinase superfamily protein
Chr2_+_16726424 0.52 AT2G40060.1
CLC2
Clathrin light chain protein
Chr1_+_5489145 0.52 AT1G15980.1
PnsB1
NDH-dependent cyclic electron flow 1
Chr5_+_9261479 0.52 AT5G26570.1
AT5G26570.2
PWD
chloroplastidic phosphoglucan, water dikinase (ATGWD3)
Chr2_+_16476198 0.52 AT2G39470.1
AT2G39470.2
AT2G39470.3
PnsL1
PsbP-like protein 2
Chr4_-_17559104 0.52 AT4G37310.1
CYP81H1
cytochrome P450, family 81, subfamily H, polypeptide 1
Chr1_+_11532199 0.52 AT1G32060.1
PRK
phosphoribulokinase
Chr4_-_15614544 0.52 AT4G32340.1
AT4G32340
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr4_-_10647079 0.52 AT4G19520.1
AT4G19520.3
AT4G19520.2
AT4G19520.5
AT4G19520.4
AT4G19520
disease resistance protein (TIR-NBS-LRR class) family
Chr5_+_20764096 0.52 AT5G51070.1
ERD1
Clp ATPase
Chr5_-_16195751 0.51 AT5G40450.2
AT5G40450.1
AT5G40450
A-kinase anchor-like protein
Chr4_+_15608905 0.51 AT4G32330.3
AT4G32330.1
AT4G32330.2
AT4G32330.4
AT4G32330
TPX2 (targeting protein for Xklp2) protein family
Chr1_-_12656605 0.51 AT1G34570.1
AT1G34570
Essential protein Yae1, N-terminal
Chr3_-_6676520 0.51 AT3G19270.1
AT3G19270.2
CYP707A4
cytochrome P450, family 707, subfamily A, polypeptide 4
Chr4_+_396444 0.51 AT4G00930.3
AT4G00930.2
AT4G00930.1
AT4G00930.4
AT4G00930.5
CIP4.1
COP1-interacting protein 4.1
Chr5_+_8661970 0.51 AT5G25120.1
CYP71B11
cytochrome p450, family 71, subfamily B, polypeptide 11
Chr1_-_5265103 0.51 AT1G15290.2
AT1G15290.1
AT1G15290
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_+_4868346 0.50 AT1G14250.1
AT1G14250
GDA1/CD39 nucleoside phosphatase family protein
Chr2_-_2081858 0.50 AT2G05620.1
AT2G05620.2
PGR5
proton gradient regulation 5
Chr5_-_20097551 0.50 AT5G49525.1
AT5G49525
transmembrane protein
Chr3_-_3277930 0.50 AT3G10520.1
HB2
hemoglobin 2
Chr1_+_28107822 0.50 AT1G74810.2
AT1G74810.5
AT1G74810.3
AT1G74810.4
AT1G74810.6
AT1G74810.7
AT1G74810.1
BOR5
HCO3- transporter family
Chr3_-_20813046 0.50 AT3G56080.2
AT3G56080.1
AT3G56080
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_1553568 0.50 AT1G05320.1
AT1G05320.4
AT1G05320.3
AT1G05320.2
AT1G05320.6
AT1G05320.5
AT1G05320.7
AT1G05320
myosin heavy chain, embryonic smooth protein
Chr5_-_18026077 0.50 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr3_-_9979843 0.50 AT3G27050.1
AT3G27050
plant/protein
Chr3_+_7946408 0.50 AT3G22420.4
AT3G22420.3
AT3G22420.5
AT3G22420.1
AT3G22420.2
AT3G22420.6
WNK2
with no lysine (K) kinase 2
Chr1_+_19806263 0.50 AT1G53160.1
AT1G53160.2
AT1G53160.3
SPL4
squamosa promoter binding protein-like 4
Chr4_+_15731443 0.50 AT4G32620.1
AT4G32620.2
AT4G32620
Enhancer of polycomb-like transcription factor protein
Chr1_-_28302728 0.50 AT1G75410.3
AT1G75410.1
BLH3
BEL1-like homeodomain 3
Chr4_+_17243583 0.49 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr1_+_3951553 0.49 AT1G11720.1
SS3
starch synthase 3
Chr1_-_18930811 0.49 AT1G51080.1
AT1G51080
golgin family A protein
Chr2_+_6797111 0.49 AT2G15580.3
AT2G15580.1
AT2G15580
RING/U-box superfamily protein
Chr2_+_7406911 0.49 AT2G17040.1
NAC036
NAC domain containing protein 36
Chr2_-_19370478 0.49 AT2G47180.1
GolS1
galactinol synthase 1
Chr1_+_28253722 0.49 AT1G75290.2
AT1G75290
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_5580821 0.49 AT1G16320.1
AT1G16320
plant/protein (DUF2358)
Chr1_-_130570 0.49 AT1G01320.1
AT1G01320.3
AT1G01320.2
AT1G01320
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_4855287 0.49 AT1G14200.1
AT1G14200
RING/U-box superfamily protein
Chr2_+_9792166 0.49 AT2G23000.2
AT2G23000.1
scpl10
serine carboxypeptidase-like 10
Chr1_+_23185760 0.49 AT1G62630.1
AT1G62630
Disease resistance protein (CC-NBS-LRR class) family
Chr4_+_5448049 0.49 AT4G08555.1
AT4G08555
hypothetical protein
Chr5_+_3509833 0.49 AT5G11060.1
KNAT4
homeobox protein knotted-1-like 4
Chr3_-_20436453 0.49 AT3G55130.1
ABCG19
white-brown complex homolog 19
Chr5_+_4122400 0.48 AT5G13010.1
EMB3011
RNA helicase family protein
Chr1_-_22317070 0.48 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr5_-_18597823 0.48 AT5G45840.1
AT5G45840.2
AT5G45840
Leucine-rich repeat protein kinase family protein
Chr5_-_18591474 0.48 AT5G45830.3
AT5G45830.2
AT5G45830.6
AT5G45830.4
AT5G45830.1
AT5G45830.5
DOG1
delay of germination 1
Chr5_-_17456657 0.48 AT5G43440.1
AT5G43440.2
AT5G43440
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_-_24767732 0.48 AT5G61600.1
ERF104
ethylene response factor 104
Chr5_-_3297373 0.48 AT5G10470.2
AT5G10470.1
KAC1
kinesin like protein for actin based chloroplast movement 1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G03200

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.9 GO:0019419 sulfate reduction(GO:0019419)
0.4 1.4 GO:0080093 regulation of photorespiration(GO:0080093)
0.3 1.7 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.3 1.0 GO:1902347 response to strigolactone(GO:1902347)
0.3 1.2 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.3 0.9 GO:0033258 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.3 1.2 GO:0030643 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.3 1.2 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.3 2.3 GO:0031936 negative regulation of chromatin silencing(GO:0031936)
0.3 1.4 GO:0032410 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.3 1.9 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.3 2.3 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.2 1.0 GO:0071963 establishment or maintenance of cell polarity regulating cell shape(GO:0071963) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769)
0.2 0.5 GO:0032025 response to cobalt ion(GO:0032025)
0.2 0.7 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.2 1.1 GO:1904589 regulation of protein import(GO:1904589)
0.2 0.6 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.2 0.6 GO:0051639 actin filament network formation(GO:0051639)
0.2 0.6 GO:0010110 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.2 0.6 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.2 0.6 GO:0006057 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
0.2 0.6 GO:0006883 cellular sodium ion homeostasis(GO:0006883)
0.2 0.5 GO:0010203 response to very low fluence red light stimulus(GO:0010203)
0.2 0.5 GO:0010184 cytokinin transport(GO:0010184)
0.2 0.7 GO:0060964 regulation of gene silencing by miRNA(GO:0060964)
0.2 1.1 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.2 0.5 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.2 0.7 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 1.0 GO:0019676 ammonia assimilation cycle(GO:0019676)
0.2 0.5 GO:0033120 positive regulation of RNA splicing(GO:0033120)
0.2 0.5 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.2 1.8 GO:0070370 cellular heat acclimation(GO:0070370)
0.2 0.8 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.2 1.1 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.2 0.5 GO:0051298 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.2 0.6 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.2 1.7 GO:0009610 response to symbiotic fungus(GO:0009610)
0.2 1.1 GO:0006021 inositol biosynthetic process(GO:0006021)
0.2 0.3 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.1 0.4 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.1 0.6 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 0.7 GO:0001578 microtubule bundle formation(GO:0001578)
0.1 0.1 GO:0050891 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.1 1.6 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.1 2.8 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 1.7 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.1 1.2 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.1 0.5 GO:0033306 phytol metabolic process(GO:0033306)
0.1 0.5 GO:0015669 gas transport(GO:0015669)
0.1 0.4 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.1 0.2 GO:0046209 nitric oxide metabolic process(GO:0046209)
0.1 0.1 GO:0045827 negative regulation of isoprenoid metabolic process(GO:0045827)
0.1 0.7 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 0.4 GO:0046740 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.1 0.6 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.1 0.3 GO:0072526 pyridoxal metabolic process(GO:0042817) pyridine-containing compound catabolic process(GO:0072526)
0.1 0.7 GO:0009745 sucrose mediated signaling(GO:0009745)
0.1 1.4 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 0.4 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 0.7 GO:0048439 flower morphogenesis(GO:0048439)
0.1 1.0 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.1 1.1 GO:0043486 histone exchange(GO:0043486)
0.1 0.6 GO:0016120 carotene biosynthetic process(GO:0016120)
0.1 0.5 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.1 0.3 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.1 0.5 GO:0051319 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.1 0.6 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 1.5 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.5 GO:0042549 photosystem II stabilization(GO:0042549)
0.1 0.4 GO:0035305 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.1 0.9 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.1 0.8 GO:0000967 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.1 0.6 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 0.4 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.1 0.4 GO:0000023 maltose metabolic process(GO:0000023)
0.1 0.4 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.1 0.5 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.1 0.5 GO:0035627 ceramide transport(GO:0035627)
0.1 1.0 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.1 0.9 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.1 0.7 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.1 4.7 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.1 1.6 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.1 0.9 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.1 0.6 GO:0090059 protoxylem development(GO:0090059)
0.1 1.4 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.1 0.3 GO:0042178 xenobiotic catabolic process(GO:0042178)
0.1 2.3 GO:0051667 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.1 0.4 GO:0072718 response to cisplatin(GO:0072718)
0.1 0.4 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 1.2 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.1 0.3 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 0.4 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.1 0.2 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.1 0.9 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.1 1.2 GO:0015976 carbon utilization(GO:0015976)
0.1 0.5 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.1 0.2 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 0.4 GO:1901535 regulation of DNA demethylation(GO:1901535)
0.1 0.4 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.1 1.0 GO:0009704 de-etiolation(GO:0009704)
0.1 0.7 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.1 0.4 GO:0006787 porphyrin-containing compound catabolic process(GO:0006787) heme oxidation(GO:0006788) tetrapyrrole catabolic process(GO:0033015)
0.1 0.2 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.1 0.3 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056)
0.1 0.7 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.1 0.1 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.1 0.2 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.5 GO:0010018 far-red light signaling pathway(GO:0010018)
0.1 1.1 GO:1901401 regulation of tetrapyrrole metabolic process(GO:1901401)
0.1 0.3 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.1 0.4 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.1 0.2 GO:0046521 sphingoid catabolic process(GO:0046521)
0.1 0.5 GO:0042981 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.1 0.3 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 0.7 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 0.2 GO:0035493 SNARE complex assembly(GO:0035493)
0.1 0.2 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.1 0.3 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.1 0.2 GO:0019695 choline metabolic process(GO:0019695)
0.1 0.6 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.3 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.1 0.4 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 0.4 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.2 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.1 0.9 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.1 0.5 GO:0042362 fat-soluble vitamin metabolic process(GO:0006775) vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360) fat-soluble vitamin biosynthetic process(GO:0042362)
0.1 1.4 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.1 0.6 GO:0030026 cellular manganese ion homeostasis(GO:0030026)
0.1 0.7 GO:0000338 protein deneddylation(GO:0000338)
0.1 0.2 GO:0048479 style development(GO:0048479)
0.1 0.2 GO:0035494 SNARE complex disassembly(GO:0035494)
0.1 0.1 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.1 0.5 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 0.2 GO:0006747 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.1 0.5 GO:0010601 positive regulation of auxin biosynthetic process(GO:0010601)
0.1 0.2 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.1 0.2 GO:1903428 positive regulation of reactive oxygen species biosynthetic process(GO:1903428)
0.1 0.2 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.1 0.2 GO:0030970 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.1 0.7 GO:0009645 response to low light intensity stimulus(GO:0009645)
0.1 0.8 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.1 0.3 GO:0009558 embryo sac cellularization(GO:0009558)
0.1 0.2 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.1 1.0 GO:0010207 photosystem II assembly(GO:0010207)
0.1 0.3 GO:0042391 regulation of membrane potential(GO:0042391)
0.1 0.6 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.1 0.3 GO:0070536 protein K63-linked deubiquitination(GO:0070536)
0.1 0.4 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.1 0.3 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.1 0.3 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.1 0.2 GO:0030242 pexophagy(GO:0030242)
0.1 0.6 GO:0006265 DNA topological change(GO:0006265)
0.1 0.3 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.1 0.3 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.1 0.8 GO:0005983 starch catabolic process(GO:0005983)
0.1 0.7 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.2 GO:0019343 cysteine biosynthetic process via cystathionine(GO:0019343)
0.1 0.3 GO:0060148 positive regulation of posttranscriptional gene silencing(GO:0060148)
0.0 0.5 GO:0010206 photosystem II repair(GO:0010206)
0.0 0.9 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.2 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.0 0.2 GO:0042659 regulation of cell fate specification(GO:0042659)
0.0 0.4 GO:0043928 exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay(GO:0043928)
0.0 0.1 GO:0007019 microtubule depolymerization(GO:0007019)
0.0 0.1 GO:0051601 exocyst localization(GO:0051601)
0.0 0.2 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.0 0.2 GO:0060151 peroxisome localization(GO:0060151) leaf pavement cell development(GO:0090436)
0.0 0.1 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 1.2 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.5 GO:0036065 fucosylation(GO:0036065)
0.0 0.6 GO:0019252 starch biosynthetic process(GO:0019252)
0.0 0.2 GO:0051176 positive regulation of sulfur metabolic process(GO:0051176)
0.0 0.2 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.0 0.3 GO:0090057 root radial pattern formation(GO:0090057)
0.0 1.2 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.1 GO:0010045 response to nickel cation(GO:0010045)
0.0 2.1 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.0 0.8 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.2 GO:0015074 DNA integration(GO:0015074)
0.0 1.9 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.2 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.0 0.1 GO:0045332 phospholipid translocation(GO:0045332)
0.0 1.2 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.2 GO:0080003 thalianol metabolic process(GO:0080003)
0.0 0.8 GO:0006949 syncytium formation(GO:0006949)
0.0 0.2 GO:0007266 Rho protein signal transduction(GO:0007266)
0.0 0.2 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.0 0.4 GO:0015804 neutral amino acid transport(GO:0015804)
0.0 0.2 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.0 0.2 GO:0010226 response to lithium ion(GO:0010226)
0.0 0.5 GO:0051865 protein autoubiquitination(GO:0051865)
0.0 0.3 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.0 0.2 GO:0009819 drought recovery(GO:0009819)
0.0 0.4 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.0 0.3 GO:0051014 actin filament severing(GO:0051014)
0.0 0.6 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.2 GO:0080120 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.0 0.4 GO:1901000 regulation of response to salt stress(GO:1901000)
0.0 0.4 GO:0043462 regulation of ATPase activity(GO:0043462)
0.0 0.1 GO:0060236 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.0 1.0 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.6 GO:0009638 phototropism(GO:0009638)
0.0 0.2 GO:0009303 rRNA transcription(GO:0009303)
0.0 0.1 GO:0035970 peptidyl-threonine dephosphorylation(GO:0035970)
0.0 0.1 GO:0045046 protein import into peroxisome membrane(GO:0045046)
0.0 0.8 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.3 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.0 0.6 GO:0071545 phosphorylated carbohydrate dephosphorylation(GO:0046838) inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.0 0.9 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.0 0.1 GO:0035017 cuticle pattern formation(GO:0035017)
0.0 0.7 GO:0009612 response to mechanical stimulus(GO:0009612)
0.0 0.5 GO:0010346 morphogenesis of a branching structure(GO:0001763) secondary shoot formation(GO:0010223) shoot axis formation(GO:0010346)
0.0 0.4 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.4 GO:0016554 cytidine to uridine editing(GO:0016554)
0.0 1.1 GO:0046283 anthocyanin-containing compound metabolic process(GO:0046283)
0.0 0.3 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.0 0.1 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.0 0.7 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.7 GO:0030855 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.0 0.3 GO:0045903 positive regulation of translational fidelity(GO:0045903)
0.0 0.1 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.0 0.2 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.0 0.2 GO:0010067 procambium histogenesis(GO:0010067)
0.0 0.3 GO:0045910 negative regulation of DNA recombination(GO:0045910)
0.0 0.3 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.1 GO:0070828 heterochromatin organization(GO:0070828)
0.0 0.1 GO:0046621 negative regulation of organ growth(GO:0046621)
0.0 0.1 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.0 0.1 GO:0031054 pre-miRNA processing(GO:0031054)
0.0 2.1 GO:0006972 hyperosmotic response(GO:0006972)
0.0 0.3 GO:0044375 regulation of peroxisome size(GO:0044375)
0.0 0.1 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.0 0.3 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.3 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.2 GO:0000719 photoreactive repair(GO:0000719) pyrimidine dimer repair(GO:0006290)
0.0 0.1 GO:0080168 abscisic acid transport(GO:0080168)
0.0 0.2 GO:0042727 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231) flavin-containing compound biosynthetic process(GO:0042727)
0.0 0.3 GO:0010375 stomatal complex patterning(GO:0010375)
0.0 0.1 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.0 0.1 GO:0043903 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of viral process(GO:0050792)
0.0 0.2 GO:0051127 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0 0.2 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.0 0.1 GO:1900363 regulation of mRNA polyadenylation(GO:1900363)
0.0 0.2 GO:0006751 glutathione catabolic process(GO:0006751)
0.0 0.3 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.0 0.1 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.0 0.2 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.0 0.4 GO:0050821 protein stabilization(GO:0050821)
0.0 0.2 GO:1902418 drug transmembrane transport(GO:0006855) (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.0 0.3 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.2 GO:0009268 response to pH(GO:0009268)
0.0 0.1 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.0 0.1 GO:0000012 single strand break repair(GO:0000012)
0.0 1.6 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.0 0.1 GO:0071244 cellular response to carbon dioxide(GO:0071244)
0.0 0.4 GO:0009937 regulation of gibberellic acid mediated signaling pathway(GO:0009937)
0.0 0.1 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.0 0.3 GO:0009585 phototransduction(GO:0007602) detection of light stimulus(GO:0009583) red, far-red light phototransduction(GO:0009585)
0.0 0.4 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.0 1.1 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.1 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.0 0.1 GO:0007000 nucleolus organization(GO:0007000)
0.0 0.1 GO:0010269 response to selenium ion(GO:0010269)
0.0 0.5 GO:0010167 response to nitrate(GO:0010167)
0.0 0.1 GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process(GO:1990116)
0.0 0.5 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 0.4 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.0 0.3 GO:0009405 pathogenesis(GO:0009405)
0.0 0.7 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.1 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.0 2.5 GO:0009411 response to UV(GO:0009411)
0.0 1.1 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.0 0.4 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.2 GO:0051569 regulation of histone H3-K4 methylation(GO:0051569)
0.0 0.7 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.0 0.2 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.1 GO:0010148 transpiration(GO:0010148)
0.0 0.9 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.4 GO:0016109 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.0 0.2 GO:0010044 response to aluminum ion(GO:0010044)
0.0 1.4 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.1 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.0 0.4 GO:0009089 lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 0.1 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.0 0.2 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.1 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.0 0.0 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.0 0.2 GO:0051567 histone H3-K9 methylation(GO:0051567)
0.0 0.1 GO:0007142 male meiosis II(GO:0007142)
0.0 0.0 GO:0044805 late nucleophagy(GO:0044805)
0.0 0.1 GO:0019509 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine biosynthetic process(GO:0071265) L-methionine salvage(GO:0071267)
0.0 0.1 GO:0048577 negative regulation of short-day photoperiodism, flowering(GO:0048577)
0.0 1.4 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.2 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.0 0.4 GO:0097031 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.1 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.0 0.0 GO:0043181 vacuolar sequestering(GO:0043181)
0.0 0.2 GO:0010088 phloem development(GO:0010088)
0.0 0.5 GO:0009756 carbohydrate mediated signaling(GO:0009756) sugar mediated signaling pathway(GO:0010182)
0.0 0.2 GO:0031221 arabinan metabolic process(GO:0031221)
0.0 2.2 GO:0006457 protein folding(GO:0006457)
0.0 0.0 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.0 0.1 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.0 0.1 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.3 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.0 0.2 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.3 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.0 1.3 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.0 0.1 GO:0045851 pH reduction(GO:0045851)
0.0 1.1 GO:1903311 regulation of mRNA processing(GO:0050684) regulation of mRNA metabolic process(GO:1903311)
0.0 0.0 GO:0006898 receptor-mediated endocytosis(GO:0006898)
0.0 0.1 GO:0009061 anaerobic respiration(GO:0009061)
0.0 0.1 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.0 0.2 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.0 0.5 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.0 0.0 GO:1902850 mitotic spindle assembly(GO:0090307) microtubule cytoskeleton organization involved in mitosis(GO:1902850)
0.0 0.6 GO:0071482 cellular response to light stimulus(GO:0071482)
0.0 0.5 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.2 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.1 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.0 0.7 GO:0051604 protein maturation(GO:0051604)
0.0 0.5 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596) protein localization to chloroplast(GO:0072598)
0.0 0.2 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.0 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.0 0.2 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.2 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.3 GO:0034243 regulation of transcription elongation from RNA polymerase II promoter(GO:0034243)
0.0 0.0 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.0 0.5 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.0 0.2 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 0.2 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.2 GO:0007143 female meiotic division(GO:0007143)
0.0 0.0 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.3 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.0 GO:0042779 tRNA 3'-trailer cleavage(GO:0042779) tRNA 3'-end processing(GO:0042780)
0.0 0.1 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.0 0.0 GO:0009093 cysteine catabolic process(GO:0009093)
0.0 0.5 GO:0007093 mitotic cell cycle checkpoint(GO:0007093)
0.0 0.4 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 0.3 GO:0006338 chromatin remodeling(GO:0006338)
0.0 0.0 GO:0035279 mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795)
0.0 0.4 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.5 GO:0009744 response to sucrose(GO:0009744)
0.0 0.1 GO:0060966 regulation of gene silencing by RNA(GO:0060966)
0.0 0.1 GO:0015695 organic cation transport(GO:0015695)
0.0 0.2 GO:0009637 response to blue light(GO:0009637)
0.0 0.0 GO:0016559 peroxisome fission(GO:0016559)
0.0 0.0 GO:0045930 negative regulation of mitotic cell cycle(GO:0045930)
0.0 0.1 GO:0046519 sphingoid metabolic process(GO:0046519)
0.0 0.0 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.0 0.1 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.1 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.0 0.4 GO:0035304 regulation of protein dephosphorylation(GO:0035304)
0.0 0.1 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.0 0.3 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.3 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.0 1.9 GO:0046777 protein autophosphorylation(GO:0046777)
0.0 0.0 GO:0019433 triglyceride catabolic process(GO:0019433)
0.0 0.1 GO:0010555 response to mannitol(GO:0010555)
0.0 0.1 GO:0009410 response to xenobiotic stimulus(GO:0009410)
0.0 0.1 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.0 1.0 GO:0007568 aging(GO:0007568)
0.0 0.5 GO:0015979 photosynthesis(GO:0015979)
0.0 0.3 GO:0016556 mRNA modification(GO:0016556)
0.0 0.3 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.4 GO:0009640 photomorphogenesis(GO:0009640)
0.0 0.1 GO:0048465 petal development(GO:0048441) corolla development(GO:0048465)
0.0 0.0 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.0 0.3 GO:0018022 peptidyl-lysine methylation(GO:0018022) histone lysine methylation(GO:0034968)
0.0 0.4 GO:0006897 endocytosis(GO:0006897)
0.0 0.9 GO:0009658 chloroplast organization(GO:0009658)
0.0 0.0 GO:0009102 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0031897 Tic complex(GO:0031897)
0.2 0.6 GO:0032432 actin filament bundle(GO:0032432)
0.2 0.9 GO:0005960 glycine cleavage complex(GO:0005960)
0.2 0.7 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.2 0.7 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.2 0.5 GO:0005813 centrosome(GO:0005813) centriole(GO:0005814)
0.1 0.5 GO:0030132 clathrin coat of trans-Golgi network vesicle(GO:0030130) clathrin coat of coated pit(GO:0030132)
0.1 1.0 GO:0009538 photosystem I reaction center(GO:0009538)
0.1 0.4 GO:0033281 TAT protein transport complex(GO:0033281)
0.1 1.7 GO:0000786 nucleosome(GO:0000786)
0.1 0.6 GO:0035061 interchromatin granule(GO:0035061)
0.1 0.4 GO:0009523 photosystem II(GO:0009523)
0.1 1.8 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.1 2.7 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.1 0.3 GO:1990415 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.1 0.3 GO:0005652 nuclear lamina(GO:0005652)
0.1 0.5 GO:0000812 Swr1 complex(GO:0000812)
0.1 0.3 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.1 0.8 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 0.9 GO:0010168 ER body(GO:0010168)
0.1 0.3 GO:0005775 vacuolar lumen(GO:0005775)
0.1 1.7 GO:0009986 cell surface(GO:0009986)
0.1 1.8 GO:0010287 plastoglobule(GO:0010287)
0.1 0.8 GO:0030125 clathrin vesicle coat(GO:0030125)
0.1 0.8 GO:0016272 prefoldin complex(GO:0016272)
0.1 0.2 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.1 1.1 GO:0097346 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202) INO80-type complex(GO:0097346)
0.1 0.3 GO:0009509 chromoplast(GO:0009509)
0.1 0.3 GO:0008278 cohesin complex(GO:0008278)
0.1 0.4 GO:0044815 DNA packaging complex(GO:0044815)
0.1 0.3 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.1 1.6 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.1 0.4 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.2 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.1 1.0 GO:0042651 thylakoid membrane(GO:0042651)
0.1 1.3 GO:0000229 cytoplasmic chromosome(GO:0000229) plastid chromosome(GO:0009508)
0.1 0.7 GO:0008180 COP9 signalosome(GO:0008180)
0.1 0.5 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.1 0.3 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 0.2 GO:0005942 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.1 2.4 GO:0010319 stromule(GO:0010319)
0.1 0.2 GO:0032807 DNA ligase IV complex(GO:0032807)
0.1 1.2 GO:0042646 plastid nucleoid(GO:0042646)
0.1 0.2 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.1 0.7 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.1 0.6 GO:0031519 PcG protein complex(GO:0031519)
0.1 1.9 GO:0005881 cytoplasmic microtubule(GO:0005881)
0.0 0.2 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.0 0.3 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.0 0.4 GO:0098576 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.0 14.7 GO:0009534 chloroplast thylakoid(GO:0009534)
0.0 0.2 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.0 0.3 GO:0032040 small-subunit processome(GO:0032040)
0.0 0.2 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.0 0.5 GO:0005844 polysome(GO:0005844)
0.0 1.0 GO:0005871 kinesin complex(GO:0005871)
0.0 0.2 GO:0033263 CORVET complex(GO:0033263)
0.0 0.1 GO:0010007 magnesium chelatase complex(GO:0010007)
0.0 0.3 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0 0.2 GO:0030286 dynein complex(GO:0030286)
0.0 0.2 GO:0031209 SCAR complex(GO:0031209)
0.0 0.2 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 0.1 GO:0034457 Mpp10 complex(GO:0034457)
0.0 2.0 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.5 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 1.9 GO:0009524 phragmoplast(GO:0009524)
0.0 1.2 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 10.8 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.3 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.5 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.2 GO:0031298 replication fork protection complex(GO:0031298)
0.0 0.3 GO:0000974 Prp19 complex(GO:0000974)
0.0 0.2 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.1 GO:1990112 RQC complex(GO:1990112)
0.0 0.2 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.0 0.3 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 0.2 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.0 0.1 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.0 0.1 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.0 0.4 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.3 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.1 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.0 0.1 GO:0031932 TORC2 complex(GO:0031932)
0.0 0.2 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.0 0.3 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.7 GO:0000123 histone acetyltransferase complex(GO:0000123)
0.0 0.0 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.0 2.6 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.4 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.1 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.0 1.9 GO:0016604 nuclear body(GO:0016604)
0.0 0.1 GO:0000938 GARP complex(GO:0000938)
0.0 0.1 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.0 0.4 GO:0031304 intrinsic component of mitochondrial inner membrane(GO:0031304)
0.0 0.2 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 0.1 GO:0005845 mRNA cap binding complex(GO:0005845) RNA cap binding complex(GO:0034518)
0.0 0.2 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.5 GO:0005684 U2-type spliceosomal complex(GO:0005684)
0.0 0.1 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.0 0.4 GO:0009579 thylakoid(GO:0009579)
0.0 0.3 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.0 0.1 GO:0009574 preprophase band(GO:0009574)
0.0 2.5 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.1 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 0.2 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.0 0.3 GO:0031903 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 3.9 GO:0005777 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.2 GO:0030904 retromer complex(GO:0030904)
0.0 0.3 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.1 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 0.1 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 0.1 GO:0000178 exosome (RNase complex)(GO:0000178)
0.0 1.4 GO:0033647 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 0.1 GO:0000314 organellar small ribosomal subunit(GO:0000314)
0.0 0.1 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.4 GO:0009504 cell plate(GO:0009504)
0.0 3.8 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.3 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.3 GO:0034708 methyltransferase complex(GO:0034708)
0.0 0.1 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 0.2 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.1 GO:0000815 ESCRT III complex(GO:0000815)
0.0 3.6 GO:0005730 nucleolus(GO:0005730)
0.0 0.2 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.9 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.4 2.5 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.3 1.7 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.3 0.9 GO:0050502 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.3 1.2 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.3 1.2 GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.3 1.1 GO:0008301 DNA binding, bending(GO:0008301)
0.3 1.1 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.3 2.3 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.2 0.7 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.2 0.2 GO:0003994 aconitate hydratase activity(GO:0003994)
0.2 1.4 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.2 0.7 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.2 0.9 GO:0052594 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.2 0.7 GO:0035671 enone reductase activity(GO:0035671)
0.2 0.7 GO:0043325 phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.2 2.4 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.2 0.6 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.2 1.2 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.2 1.6 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.2 0.8 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.2 0.6 GO:0030275 LRR domain binding(GO:0030275)
0.2 0.6 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.2 1.3 GO:0032036 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.2 2.2 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.2 0.5 GO:0010242 oxygen evolving activity(GO:0010242)
0.2 1.2 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.2 0.5 GO:0005344 oxygen transporter activity(GO:0005344)
0.2 1.0 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.2 0.5 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.1 0.4 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.1 0.4 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.1 0.6 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 1.0 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.1 1.0 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 0.6 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.1 0.5 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.1 0.5 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.1 0.4 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.1 0.5 GO:0070034 telomerase RNA binding(GO:0070034)
0.1 0.4 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.1 1.4 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.1 0.2 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.1 1.2 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 0.3 GO:0015180 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.1 0.4 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 0.3 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
0.1 0.8 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 0.2 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.1 0.4 GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719)
0.1 0.5 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.1 0.8 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.1 0.3 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.1 0.4 GO:0015928 fucosidase activity(GO:0015928)
0.1 3.1 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.3 GO:0022824 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.1 0.4 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.1 0.3 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 0.6 GO:0016151 nickel cation binding(GO:0016151)
0.1 0.4 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.1 0.3 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.3 GO:0070402 NADPH binding(GO:0070402)
0.1 0.8 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 0.3 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.1 0.3 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.1 0.3 GO:0050997 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.1 0.3 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.1 0.4 GO:0016463 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.1 0.6 GO:0009916 alternative oxidase activity(GO:0009916)
0.1 0.5 GO:0052658 inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658)
0.1 0.3 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
0.1 0.2 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 0.6 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 0.2 GO:0016972 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.1 0.3 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.1 0.4 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.1 0.4 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.1 0.4 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.1 0.3 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.1 0.3 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.1 3.3 GO:0003713 transcription coactivator activity(GO:0003713)
0.1 0.2 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.1 0.5 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 0.2 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.1 0.8 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.1 0.2 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 0.7 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.1 0.2 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.1 0.3 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.1 1.6 GO:0030276 clathrin binding(GO:0030276)
0.1 0.3 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 0.3 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.6 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 0.4 GO:0030544 Hsp70 protein binding(GO:0030544)
0.1 0.7 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.1 0.5 GO:0017091 AU-rich element binding(GO:0017091)
0.1 0.3 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.1 0.3 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.1 0.2 GO:0045430 chalcone isomerase activity(GO:0045430)
0.1 0.3 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.6 GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.1 0.4 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.1 0.2 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.1 0.4 GO:0030527 structural constituent of chromatin(GO:0030527)
0.1 0.3 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 1.2 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.1 0.6 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.1 1.0 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 0.2 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.1 0.7 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.1 0.6 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.1 0.2 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.1 0.3 GO:0030619 U1 snRNA binding(GO:0030619)
0.1 0.2 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.1 0.3 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.1 0.2 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.1 0.1 GO:0070405 ammonium ion binding(GO:0070405)
0.1 0.3 GO:0051765 inositol tetrakisphosphate kinase activity(GO:0051765)
0.1 0.2 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.1 0.9 GO:0008417 fucosyltransferase activity(GO:0008417)
0.1 0.5 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 0.4 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 1.4 GO:0008266 poly(U) RNA binding(GO:0008266)
0.0 0.2 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.0 0.1 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.0 0.2 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.0 0.2 GO:0019210 kinase inhibitor activity(GO:0019210)
0.0 1.2 GO:0043138 3'-5' DNA helicase activity(GO:0043138)
0.0 0.1 GO:0010331 gibberellin binding(GO:0010331)
0.0 0.2 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.0 0.3 GO:0002020 protease binding(GO:0002020)
0.0 0.9 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.4 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 1.5 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.0 0.2 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 0.9 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 0.5 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.4 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.0 0.4 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.0 0.2 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.0 0.2 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 0.2 GO:0001671 ATPase activator activity(GO:0001671)
0.0 0.5 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.1 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.0 0.3 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.0 0.3 GO:0005034 osmosensor activity(GO:0005034)
0.0 0.4 GO:0015198 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.0 0.6 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 1.4 GO:0051087 chaperone binding(GO:0051087)
0.0 0.1 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.0 0.8 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 0.4 GO:0043495 protein anchor(GO:0043495)
0.0 0.6 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 2.7 GO:0042393 histone binding(GO:0042393)
0.0 0.3 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.0 0.2 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.2 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.0 0.3 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 0.3 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.0 0.5 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.2 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.0 0.3 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.2 GO:0008934 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.0 0.1 GO:0008187 poly-pyrimidine tract binding(GO:0008187)
0.0 0.2 GO:0051959 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.0 0.4 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.3 GO:0019871 ion channel inhibitor activity(GO:0008200) channel inhibitor activity(GO:0016248) sodium channel regulator activity(GO:0017080) sodium channel inhibitor activity(GO:0019871)
0.0 0.1 GO:0008665 tRNA 2'-phosphotransferase activity(GO:0000215) 2'-phosphotransferase activity(GO:0008665)
0.0 0.1 GO:0015101 organic cation transmembrane transporter activity(GO:0015101)
0.0 0.1 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.0 0.2 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 0.3 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.1 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.0 0.2 GO:0045431 flavonol synthase activity(GO:0045431)
0.0 0.2 GO:0071933 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.0 0.2 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.8 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 1.0 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.0 0.2 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.0 1.9 GO:0003777 microtubule motor activity(GO:0003777)
0.0 4.9 GO:0043531 ADP binding(GO:0043531)
0.0 0.1 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.0 0.1 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.0 1.7 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.2 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.4 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.2 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.2 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.0 0.1 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.0 0.5 GO:0015248 sterol transporter activity(GO:0015248)
0.0 0.3 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.3 GO:0008312 7S RNA binding(GO:0008312)
0.0 0.7 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.1 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.0 0.1 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.0 3.6 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.4 GO:0016307 phosphatidylinositol phosphate kinase activity(GO:0016307)
0.0 0.2 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.0 0.1 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.0 0.2 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.1 GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.0 1.0 GO:0003727 single-stranded RNA binding(GO:0003727)
0.0 0.3 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.0 0.5 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.4 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.3 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.3 GO:0015645 fatty acid ligase activity(GO:0015645)
0.0 0.4 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.6 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.4 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.0 1.0 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.3 GO:0008199 ferric iron binding(GO:0008199)
0.0 0.8 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.1 GO:0017070 U6 snRNA binding(GO:0017070)
0.0 0.4 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.0 1.1 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.5 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.1 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.0 0.3 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.3 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.1 GO:0032131 alkylated DNA binding(GO:0032131)
0.0 0.1 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.0 0.7 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.0 0.3 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.0 0.5 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.2 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 2.9 GO:0003779 actin binding(GO:0003779)
0.0 0.2 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 0.9 GO:0008237 metallopeptidase activity(GO:0008237)
0.0 0.4 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.3 GO:0052742 phosphatidylinositol kinase activity(GO:0052742)
0.0 0.1 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.0 0.1 GO:0016433 rRNA (adenine) methyltransferase activity(GO:0016433)
0.0 0.4 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.2 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.1 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.0 GO:0004106 chorismate mutase activity(GO:0004106)
0.0 0.2 GO:0017069 snRNA binding(GO:0017069)
0.0 0.2 GO:0030151 molybdenum ion binding(GO:0030151)
0.0 1.1 GO:0009931 calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.2 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.2 GO:0003916 DNA topoisomerase activity(GO:0003916)
0.0 0.1 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.0 0.3 GO:0008066 glutamate receptor activity(GO:0008066)
0.0 0.4 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.7 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.0 0.3 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.2 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.7 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.0 0.2 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.0 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.0 0.1 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.0 0.4 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.1 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.8 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.0 GO:0047443 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.0 0.1 GO:0008198 ferrous iron binding(GO:0008198)
0.0 0.2 GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor(GO:0016634)
0.0 0.6 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.1 GO:0060090 binding, bridging(GO:0060090)
0.0 0.2 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 1.7 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.1 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.5 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.0 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.0 0.1 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 0.1 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.0 0.2 GO:0016278 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.0 0.1 GO:0016851 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.0 0.7 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.2 GO:0004575 sucrose alpha-glucosidase activity(GO:0004575)
0.0 0.1 GO:0000155 phosphorelay sensor kinase activity(GO:0000155)
0.0 0.2 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 0.1 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 0.9 GO:0008017 microtubule binding(GO:0008017)
0.0 0.1 GO:0004834 tryptophan synthase activity(GO:0004834)
0.0 0.1 GO:0005504 fatty acid binding(GO:0005504)
0.0 0.4 GO:0005249 voltage-gated potassium channel activity(GO:0005249)
0.0 0.1 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.1 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.6 GO:0005451 monovalent cation:proton antiporter activity(GO:0005451)
0.0 0.1 GO:0035250 UDP-galactosyltransferase activity(GO:0035250)
0.0 0.0 GO:0015925 galactosidase activity(GO:0015925)
0.0 0.3 GO:0008138 protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.0 0.2 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.0 0.8 GO:0000989 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 0.0 GO:0004477 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.0 0.1 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.0 0.0 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.1 1.1 NABA CORE MATRISOME Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans
0.1 0.5 PID P53 REGULATION PATHWAY p53 pathway
0.1 0.5 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.3 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network
0.1 0.2 PID ATF2 PATHWAY ATF-2 transcription factor network
0.1 0.2 PID P38 ALPHA BETA DOWNSTREAM PATHWAY Signaling mediated by p38-alpha and p38-beta
0.1 0.1 PID AURORA A PATHWAY Aurora A signaling
0.0 0.4 PID E2F PATHWAY E2F transcription factor network
0.0 0.2 PID S1P S1P1 PATHWAY S1P1 pathway
0.0 0.1 PID ATM PATHWAY ATM pathway
0.0 0.1 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.0 0.1 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.0 0.1 PID REG GR PATHWAY Glucocorticoid receptor regulatory network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.2 0.5 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.1 0.3 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.1 0.3 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.1 0.6 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.1 0.5 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 0.1 REACTOME TRANSPORT OF MATURE TRANSCRIPT TO CYTOPLASM Genes involved in Transport of Mature Transcript to Cytoplasm
0.1 0.4 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.3 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.1 0.2 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.0 0.4 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.1 REACTOME MEIOTIC SYNAPSIS Genes involved in Meiotic Synapsis
0.0 0.4 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.0 0.2 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.3 REACTOME PROTEIN FOLDING Genes involved in Protein folding
0.0 0.1 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.0 0.1 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.0 0.1 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.0 0.1 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.0 0.2 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.0 0.1 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.0 0.1 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.0 0.0 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS Genes involved in Synthesis of bile acids and bile salts