Project
GSE130291:vernalization in Arabidopsis thaliana
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Results for AT2G47190
Z-value: 0.22
Transcription factors associated with AT2G47190
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
AT2G47190
|
AT2G47190 | myb domain protein 2 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| MYB2 | arTal_v1_Chr2_+_19375985_19375985 | -0.23 | 4.3e-01 | Click! |
Activity profile of AT2G47190 motif
Sorted Z-values of AT2G47190 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| Chr1_+_28975255 | 1.37 |
AT1G77120.1
|
ADH1
|
alcohol dehydrogenase 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of AT2G47190
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.3 | 1.4 | GO:0043279 | response to caffeine(GO:0031000) response to alkaloid(GO:0043279) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 1.4 | GO:0004024 | alcohol dehydrogenase activity, zinc-dependent(GO:0004024) |