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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G46830

Z-value: 0.18

Transcription factors associated with AT2G46830

Gene Symbol Gene ID Gene Info
AT2G46830
AT2G46830 circadian clock associated 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
CCA1arTal_v1_Chr2_+_19245591_192456840.733.3e-03Click!

Activity profile of AT2G46830 motif

Sorted Z-values of AT2G46830 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_8358546 0.41 AT5G24470.1
PRR5
two-component response regulator-like protein
Chr5_+_24674963 0.23 AT5G61380.1
TOC1
CCT motif -containing response regulator protein
Chr2_-_16734953 0.22 AT2G40080.1
ELF4
EARLY FLOWERING-like protein (DUF1313)

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G46830

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.0 0.2 GO:0042753 positive regulation of circadian rhythm(GO:0042753)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 GO:0000156 phosphorelay response regulator activity(GO:0000156)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 PID MTOR 4PATHWAY mTOR signaling pathway