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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G46680

Z-value: 2.81

Transcription factors associated with AT2G46680

Gene Symbol Gene ID Gene Info
AT2G46680 homeobox 7

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HB-7arTal_v1_Chr2_-_19166949_191669670.761.7e-03Click!

Activity profile of AT2G46680 motif

Sorted Z-values of AT2G46680 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_22712441 3.74 AT5G56080.1
nicotianamine synthase 2
Chr3_+_20612693 3.67 AT3G55580.1
Regulator of chromosome condensation (RCC1) family protein
Chr4_-_7401951 3.39 AT4G12470.1
azelaic acid induced 1
Chr2_-_6493512 3.36 AT2G15020.1
hypothetical protein
Chr3_+_4729399 3.29 AT3G14210.1
AT3G14210.2
GDSL-like lipase/acylhydrolase superfamily protein
Chr3_+_6023844 3.27 AT3G17609.2
AT3G17609.3
AT3G17609.4
AT3G17609.1
HY5-homolog
Chr4_+_10707344 3.09 AT4G19690.2
AT4G19690.1
iron-regulated transporter 1
Chr3_-_2699257 2.97 AT3G08860.2
PYRIMIDINE 4
Chr3_-_2699420 2.88 AT3G08860.1
PYRIMIDINE 4
Chr1_-_5765798 2.87 AT1G16850.1
transmembrane protein
Chr2_+_9126263 2.83 AT2G21320.1
B-box zinc finger family protein
Chr4_+_15451988 2.77 AT4G31940.1
cytochrome P450, family 82, subfamily C, polypeptide 4
Chr1_+_18458526 2.62 AT1G49860.1
glutathione S-transferase (class phi) 14
Chr2_-_12415661 2.60 AT2G28900.1
outer plastid envelope protein 16-1
Chr4_+_1292483 2.53 AT4G02920.1
AT4G02920.2
hypothetical protein
Chr4_+_8827600 2.53 AT4G15430.2
AT4G15430.1
ERD (early-responsive to dehydration stress) family protein
Chr1_-_18238497 2.48 AT1G49310.1
transmembrane protein
Chr1_-_3756998 2.44 AT1G11210.1
cotton fiber protein, putative (DUF761)
Chr3_-_7796310 2.42 AT3G22120.1
AT3G22120.2
cell wall-plasma membrane linker protein
Chr1_+_24554413 2.40 AT1G65960.4
glutamate decarboxylase 2
Chr4_-_2429899 2.40 AT4G04770.1
ATP binding cassette protein 1
Chr1_-_23246949 2.37 AT1G62770.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_-_23195917 2.32 AT3G62700.1
multidrug resistance-associated protein 10
Chr4_+_13253084 2.32 AT4G26150.1
cytokinin-responsive gata factor 1
Chr4_-_15954803 2.30 AT4G33070.1
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Chr1_+_24551807 2.28 AT1G65960.3
AT1G65960.1
glutamate decarboxylase 2
Chr3_-_20629295 2.27 AT3G55610.1
delta 1-pyrroline-5-carboxylate synthase 2
Chr5_-_20204595 2.26 AT5G49730.1
AT5G49730.2
ferric reduction oxidase 6
Chr5_-_22500564 2.25 AT5G55540.2
AT5G55540.1
tornado 1
Chr4_+_9028262 2.25 AT4G15910.1
drought-induced 21
Chr3_+_19845097 2.24 AT3G53530.2
AT3G53530.1
Chloroplast-targeted copper chaperone protein
Chr1_+_4056165 2.23 AT1G12010.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_-_16603059 2.21 AT2G39800.2
AT2G39800.4
AT2G39800.3
delta1-pyrroline-5-carboxylate synthase 1
Chr5_-_22991530 2.20 AT5G56860.1
GATA type zinc finger transcription factor family protein
Chr1_+_27538190 2.19 AT1G73220.1
organic cation/carnitine transporter1
Chr2_+_6893949 2.18 AT2G15830.1
hypothetical protein
Chr3_-_20629093 2.18 AT3G55610.2
delta 1-pyrroline-5-carboxylate synthase 2
Chr1_+_7785708 2.18 AT1G22065.1
hypothetical protein
Chr1_-_22317070 2.17 AT1G60590.1
Pectin lyase-like superfamily protein
Chr3_-_5173001 2.17 AT3G15354.4
AT3G15354.1
AT3G15354.2
AT3G15354.3
SPA1-related 3
Chr1_-_23251195 2.17 AT1G62780.1
dimethylallyl, adenosine tRNA methylthiotransferase
Chr1_+_19685747 2.15 AT1G52870.1
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Chr1_+_19685545 2.14 AT1G52870.2
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Chr2_-_17202848 2.12 AT2G41250.1
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_+_16579936 2.10 AT5G41410.1
POX (plant homeobox) family protein
Chr4_-_12345652 2.09 AT4G23700.2
cation/H+ exchanger 17
Chr3_+_2465235 2.07 AT3G07720.1
Galactose oxidase/kelch repeat superfamily protein
Chr3_-_2569700 2.07 AT3G08040.2
AT3G08040.1
MATE efflux family protein
Chr1_+_24552003 2.04 AT1G65960.2
glutamate decarboxylase 2
Chr3_-_4762457 2.04 AT3G14280.1
LL-diaminopimelate aminotransferase
Chr4_-_12346051 2.03 AT4G23700.1
cation/H+ exchanger 17
Chr2_+_13814543 1.99 AT2G32540.1
cellulose synthase-like B4
Chr2_+_18346306 1.98 AT2G44460.1
beta glucosidase 28
Chr5_-_25920254 1.98 AT5G64840.1
general control non-repressible 5
Chr1_-_28302728 1.98 AT1G75410.3
AT1G75410.1
BEL1-like homeodomain 3
Chr1_+_25016402 1.97 AT1G67030.1
zinc finger protein 6
Chr3_-_10599042 1.96 AT3G28345.1
ABC transporter family protein
Chr3_-_18375784 1.95 AT3G49580.3
AT3G49580.2
response to low sulfur 1
Chr1_+_29759030 1.95 AT1G79110.2
AT1G79110.3
AT1G79110.1
zinc ion binding protein
Chr2_-_19165233 1.95 AT2G46670.1
CCT motif family protein
Chr4_-_18551183 1.94 AT4G40010.1
SNF1-related protein kinase 2.7
Chr5_-_22680152 1.94 AT5G56000.1
HEAT SHOCK PROTEIN 81.4
Chr5_+_21020014 1.94 AT5G51750.1
subtilase 1.3
Chr1_-_450426 1.93 AT1G02280.1
AT1G02280.2
translocon at the outer envelope membrane of chloroplasts 33
Chr2_+_528179 1.93 AT2G02100.1
low-molecular-weight cysteine-rich 69
Chr2_-_16664431 1.92 AT2G39920.4
AT2G39920.1
AT2G39920.3
AT2G39920.2
HAD superfamily, subfamily IIIB acid phosphatase
Chr3_-_82182 1.92 AT3G01260.1
Galactose mutarotase-like superfamily protein
Chr4_-_9583290 1.92 AT4G17030.1
expansin-like B1
Chr1_+_28498821 1.89 AT1G75900.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_+_19005547 1.88 AT5G46840.1
AT5G46840.2
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr3_+_22216540 1.88 AT3G60140.2
AT3G60140.1
Glycosyl hydrolase superfamily protein
Chr1_+_28829243 1.88 AT1G76800.1
Vacuolar iron transporter (VIT) family protein
Chr2_+_18347765 1.87 AT2G44460.2
beta glucosidase 28
Chr5_-_25898171 1.86 AT5G64770.1
root meristem growth factor
Chr5_-_648538 1.85 AT5G02830.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_+_9829261 1.85 AT1G28135.1
hypothetical protein
Chr1_+_23328727 1.85 AT1G62975.2
AT1G62975.1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_18850645 1.85 AT5G46490.3
AT5G46490.4
AT5G46490.5
AT5G46490.6
AT5G46490.7
AT5G46490.1
AT5G46490.8
AT5G46490.2
Disease resistance protein (TIR-NBS-LRR class) family
Chr4_+_11306945 1.84 AT4G21210.2
AT4G21210.1
PPDK regulatory protein
Chr3_-_17506124 1.84 AT3G47500.1
cycling DOF factor 3
Chr1_-_4651549 1.83 AT1G13600.1
basic leucine-zipper 58
Chr2_-_15599951 1.83 AT2G37130.2
Peroxidase superfamily protein
Chr4_-_5456100 1.81 AT4G08570.1
Heavy metal transport/detoxification superfamily protein
Chr3_+_484256 1.81 AT3G02370.1
AT3G02370.4
AT3G02370.2
AT3G02370.3
tRNA-splicing endonuclease subunit
Chr2_+_15053483 1.81 AT2G35840.4
AT2G35840.2
AT2G35840.1
Sucrose-6F-phosphate phosphohydrolase family protein
Chr1_-_26434538 1.80 AT1G70200.1
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr2_+_10244745 1.80 AT2G24100.1
ATP-dependent DNA helicase
Chr1_+_29356346 1.78 AT1G78070.2
AT1G78070.3
Transducin/WD40 repeat-like superfamily protein
Chr4_-_571595 1.78 AT4G01390.1
TRAF-like family protein
Chr2_-_15092353 1.78 AT2G35940.3
AT2G35940.1
BEL1-like homeodomain 1
Chr5_-_25462458 1.78 AT5G63600.2
AT5G63600.1
flavonol synthase 5
Chr1_-_3518035 1.77 AT1G10640.1
Pectin lyase-like superfamily protein
Chr2_+_1966806 1.77 AT2G05380.1
AT2G05380.2
glycine-rich protein 3 short isoform
Chr3_-_7463525 1.76 AT3G21250.1
AT3G21250.6
AT3G21250.5
AT3G21250.3
AT3G21250.2
AT3G21250.4
multidrug resistance-associated protein 6
Chr1_-_17266724 1.76 AT1G46768.3
AT1G46768.2
AT1G46768.1
related to AP2 1
Chr2_-_16603319 1.76 AT2G39800.1
delta1-pyrroline-5-carboxylate synthase 1
Chr5_-_20208730 1.75 AT5G49740.3
AT5G49740.2
AT5G49740.1
ferric reduction oxidase 7
Chr2_-_15600154 1.75 AT2G37130.1
Peroxidase superfamily protein
Chr2_-_14268003 1.75 AT2G33730.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_+_1966610 1.75 AT2G05380.3
glycine-rich protein 3 short isoform
Chr4_-_18370698 1.75 AT4G39510.1
cytochrome P450, family 96, subfamily A, polypeptide 12
Chr5_-_17467377 1.74 AT5G43470.3
AT5G43470.2
AT5G43470.4
Disease resistance protein (CC-NBS-LRR class) family
Chr3_-_18375940 1.72 AT3G49580.1
response to low sulfur 1
Chr3_+_22635803 1.71 AT3G61160.3
AT3G61160.6
AT3G61160.5
AT3G61160.4
AT3G61160.2
AT3G61160.1
Protein kinase superfamily protein
Chr1_-_28302571 1.71 AT1G75410.2
BEL1-like homeodomain 3
Chr2_-_14310608 1.71 AT2G33830.2
Dormancy/auxin associated family protein
Chr5_+_26688943 1.70 AT5G66820.1
transmembrane protein
Chr3_+_11810726 1.70 AT3G30180.1
brassinosteroid-6-oxidase 2
Chr3_-_16074929 1.70 AT3G44450.1
hypothetical protein
Chr3_+_3942257 1.70 AT3G12390.1
Nascent polypeptide-associated complex (NAC), alpha subunit family protein
Chr1_+_16263805 1.69 AT1G43160.1
related to AP2 6
Chr2_-_521707 1.68 AT2G02080.4
AT2G02080.2
AT2G02080.5
AT2G02080.6
AT2G02080.3
AT2G02080.1
indeterminate(ID)-domain 4
Chr3_+_15983199 1.68 AT3G44300.1
nitrilase 2
Chr4_-_11313709 1.67 AT4G21215.1
AT4G21215.2
transmembrane protein
Chr1_+_25746697 1.67 AT1G68570.1
Major facilitator superfamily protein
Chr5_+_9033204 1.66 AT5G25890.1
indole-3-acetic acid inducible 28
Chr2_-_18811085 1.66 AT2G45660.2
AT2G45660.1
AGAMOUS-like 20
Chr2_-_14310339 1.66 AT2G33830.1
Dormancy/auxin associated family protein
Chr1_+_22198266 1.66 AT1G60190.1
ARM repeat superfamily protein
Chr2_-_9231580 1.65 AT2G21560.1
nucleolar-like protein
Chr1_-_26800483 1.65 AT1G71040.1
Cupredoxin superfamily protein
Chr3_-_22915393 1.65 AT3G61890.1
homeobox 12
Chr5_-_1994824 1.65 AT5G06530.2
AT5G06530.3
AT5G06530.4
AT5G06530.1
ABC-2 type transporter family protein
Chr3_+_5243432 1.65 AT3G15510.1
NAC domain containing protein 2
Chr1_-_23818481 1.64 AT1G64170.1
cation/H+ exchanger 16
Chr5_+_17564697 1.64 AT5G43740.2
AT5G43740.1
Disease resistance protein (CC-NBS-LRR class) family
Chr1_-_4845847 1.64 AT1G14170.2
AT1G14170.1
AT1G14170.3
RNA-binding KH domain-containing protein
Chr5_+_22671113 1.64 AT5G55990.1
AT5G55990.2
calcineurin B-like protein 2
Chr3_-_18373147 1.64 AT3G49570.1
response to low sulfur 3
Chr1_+_4467094 1.63 AT1G13110.1
cytochrome P450, family 71 subfamily B, polypeptide 7
Chr1_+_13225168 1.63 AT1G35720.1
annexin 1
Chr4_-_16631339 1.63 AT4G34900.3
AT4G34900.2
AT4G34900.1
xanthine dehydrogenase 2
Chr4_+_5812335 1.62 AT4G09110.1
RING/U-box superfamily protein
Chr4_-_17831619 1.62 AT4G37925.1
subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex
Chr2_+_1576694 1.62 AT2G04530.1
Metallo-hydrolase/oxidoreductase superfamily protein
Chr4_-_7553332 1.62 AT4G12910.2
AT4G12910.1
serine carboxypeptidase-like 20
Chr3_-_19547171 1.61 AT3G52740.1
hypothetical protein
Chr1_-_13698739 1.61 AT1G36370.1
serine hydroxymethyltransferase 7
Chr1_-_11719988 1.60 AT1G32450.1
nitrate transporter 1.5
Chr3_-_5181537 1.59 AT3G15353.1
AT3G15353.2
metallothionein 3
Chr4_-_11659105 1.59 AT4G21990.1
AT4G21990.2
APS reductase 3
Chr4_+_18160903 1.59 AT4G38960.2
AT4G38960.6
AT4G38960.5
AT4G38960.1
AT4G38960.4
B-box type zinc finger family protein
Chr5_-_23995865 1.59 AT5G59530.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_+_10953540 1.58 AT4G20280.1
TBP-associated factor 11
Chr2_-_856725 1.58 AT2G02950.1
phytochrome kinase substrate 1
Chr3_+_20842145 1.58 AT3G56170.1
Ca-2+ dependent nuclease
Chr3_-_18718396 1.58 AT3G50440.1
methylesterase
Chr1_+_26122080 1.58 AT1G69490.1
NAC-like, activated by AP3/PI
Chr1_+_6759859 1.58 AT1G19520.1
AT1G19520.2
pentatricopeptide (PPR) repeat-containing protein
Chr5_-_18189523 1.57 AT5G45070.1
phloem protein 2-A8
Chr5_-_23117403 1.57 AT5G57110.3
AT5G57110.1
AT5G57110.2
autoinhibited Ca2+ -ATPase, isoform 8
Chr1_-_1894019 1.57 AT1G06190.4
AT1G06190.2
AT1G06190.5
AT1G06190.1
AT1G06190.3
Rho termination factor
Chr5_-_22944970 1.57 AT5G56710.2
AT5G56710.1
Ribosomal protein L31e family protein
Chr1_+_24097913 1.56 AT1G64860.2
sigma factor A
Chr1_+_25746994 1.56 AT1G68570.2
Major facilitator superfamily protein
Chr1_+_14158452 1.56 AT1G37130.1
nitrate reductase 2
Chr4_+_9560078 1.56 AT4G16990.16
AT4G16990.17
AT4G16990.1
AT4G16990.3
AT4G16990.4
disease resistance protein (TIR-NBS class)
Chr1_+_18701882 1.56 AT1G50480.1
10-formyltetrahydrofolate synthetase
Chr4_-_843531 1.56 AT4G01940.1
NFU domain protein 1
Chr2_-_15783480 1.56 AT2G37630.1
myb-like HTH transcriptional regulator family protein
Chr5_+_105268 1.56 AT5G01260.3
AT5G01260.2
AT5G01260.1
Carbohydrate-binding-like fold
Chr5_+_579744 1.56 AT5G02580.1
AT5G02580.3
AT5G02580.2
argininosuccinate lyase
Chr1_+_24097736 1.56 AT1G64860.1
sigma factor A
Chr1_-_8688246 1.55 AT1G24510.1
AT1G24510.2
AT1G24510.3
TCP-1/cpn60 chaperonin family protein
Chr1_+_29354944 1.55 AT1G78070.1
Transducin/WD40 repeat-like superfamily protein
Chr2_-_827994 1.55 AT2G02850.1
plantacyanin
Chr4_-_12421464 1.55 AT4G23890.1
NAD(P)H-quinone oxidoreductase subunit S
Chr1_-_3590928 1.54 AT1G10760.1
AT1G10760.3
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein
Chr3_+_19825267 1.54 AT3G53480.1
pleiotropic drug resistance 9
Chr3_-_1305879 1.54 AT3G04760.2
AT3G04760.1
Pentatricopeptide repeat (PPR-like) superfamily protein
Chr3_+_16386395 1.53 AT3G44890.1
ribosomal protein L9
Chr1_-_27732273 1.53 AT1G73730.2
ETHYLENE-INSENSITIVE3-like 3
Chr2_-_15092178 1.53 AT2G35940.2
BEL1-like homeodomain 1
Chr1_-_4921535 1.53 AT1G14380.3
AT1G14380.4
AT1G14380.2
AT1G14380.5
AT1G14380.6
AT1G14380.7
AT1G14380.1
IQ-domain 28
Chr2_+_7267722 1.52 AT2G16740.1
ubiquitin-conjugating enzyme 29
Chr4_-_17564763 1.52 AT4G37330.1
cytochrome P450, family 81, subfamily D, polypeptide 4
Chr5_+_26884203 1.52 AT5G67385.3
AT5G67385.1
AT5G67385.5
AT5G67385.4
Phototropic-responsive NPH3 family protein
Chr4_-_13001948 1.52 AT4G25433.1
peptidoglycan-binding LysM domain-containing protein
Chr1_+_99865 1.51 AT1G01240.4
AT1G01240.2
AT1G01240.1
AT1G01240.3
AT1G01240.5
transmembrane protein
Chr4_-_16799553 1.51 AT4G35300.11
AT4G35300.1
AT4G35300.2
AT4G35300.9
AT4G35300.3
AT4G35300.8
AT4G35300.6
AT4G35300.5
AT4G35300.4
AT4G35300.7
AT4G35300.10
tonoplast monosaccharide transporter2
Chr5_-_18435469 1.51 AT5G45500.3
AT5G45500.6
AT5G45500.2
AT5G45500.9
AT5G45500.1
AT5G45500.4
AT5G45500.7
AT5G45500.8
AT5G45500.5
RNI-like superfamily protein
Chr5_-_23431198 1.51 AT5G57830.1
zein-binding protein (Protein of unknown function, DUF593)
Chr1_+_18870059 1.51 AT1G50920.1
Nucleolar GTP-binding protein
Chr3_-_9494302 1.50 AT3G25930.1
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr3_-_3961911 1.50 AT3G12490.1
AT3G12490.2
cystatin B
Chr4_+_17739514 1.50 AT4G37750.1
Integrase-type DNA-binding superfamily protein
Chr4_-_13860745 1.50 AT4G27820.1
AT4G27820.2
beta glucosidase 9
Chr1_-_6555610 1.49 AT1G18970.1
germin-like protein 4
Chr2_-_11834427 1.49 AT2G27770.1
DUF868 family protein (DUF868)
Chr5_-_21291928 1.49 AT5G52450.1
MATE efflux family protein
Chr4_+_12310885 1.48 AT4G23600.2
Tyrosine transaminase family protein
Chr1_+_11479763 1.48 AT1G31970.1
DEA(D/H)-box RNA helicase family protein
Chr5_-_25676823 1.48 AT5G64170.1
AT5G64170.2
AT5G64170.3
dentin sialophosphoprotein-like protein
Chr4_-_9171064 1.48 AT4G16180.2
transmembrane protein
Chr1_+_25701770 1.48 AT1G68500.1
hypothetical protein
Chr4_-_17830465 1.48 AT4G37920.1
endoribonuclease E-like protein
Chr4_+_9558571 1.48 AT4G16990.5
AT4G16990.8
AT4G16990.7
AT4G16990.6
AT4G16990.2
AT4G16990.9
disease resistance protein (TIR-NBS class)
Chr1_-_22382422 1.47 AT1G60790.1
trichome birefringence-like protein (DUF828)
Chr2_+_7964326 1.47 AT2G18328.1
RAD-like 4
Chr4_-_10291058 1.47 AT4G18700.1
CBL-interacting protein kinase 12

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G46680

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.1 2.1 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
1.5 1.5 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
1.4 8.7 GO:0055129 L-proline biosynthetic process(GO:0055129)
1.1 4.5 GO:0030418 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
1.0 3.1 GO:0071461 cellular response to redox state(GO:0071461)
0.9 5.7 GO:1902326 positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.9 2.8 GO:0071281 cellular response to iron ion(GO:0071281)
0.8 2.5 GO:0019406 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.8 2.4 GO:0010024 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.8 2.4 GO:0046898 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.8 3.1 GO:0015675 nickel cation transport(GO:0015675)
0.8 2.3 GO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.7 5.2 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.7 2.2 GO:0015696 ammonium transport(GO:0015696)
0.7 2.2 GO:0010028 xanthophyll cycle(GO:0010028)
0.7 3.4 GO:0010361 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.7 3.3 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system(GO:0010201)
0.7 2.6 GO:2000769 establishment or maintenance of cell polarity regulating cell shape(GO:0071963) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769)
0.6 3.9 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.6 2.6 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.6 2.5 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.6 0.6 GO:0018023 peptidyl-lysine trimethylation(GO:0018023) histone H3-K4 trimethylation(GO:0080182)
0.5 4.9 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.5 1.6 GO:0060964 regulation of gene silencing by miRNA(GO:0060964)
0.5 1.6 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.5 4.8 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.5 2.7 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.5 3.2 GO:0031116 positive regulation of microtubule polymerization or depolymerization(GO:0031112) positive regulation of microtubule polymerization(GO:0031116)
0.5 6.9 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.5 3.2 GO:0002230 positive regulation of defense response to virus by host(GO:0002230)
0.5 2.1 GO:0035494 SNARE complex disassembly(GO:0035494)
0.5 1.6 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.5 1.6 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.5 7.2 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.5 2.1 GO:0019499 cyanide metabolic process(GO:0019499)
0.5 1.5 GO:0010444 guard mother cell differentiation(GO:0010444)
0.5 1.4 GO:0008608 attachment of spindle microtubules to kinetochore(GO:0008608)
0.5 2.4 GO:2000576 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.5 1.9 GO:0033499 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.5 2.4 GO:0035627 ceramide transport(GO:0035627)
0.5 1.4 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.5 0.9 GO:0080005 photosystem stoichiometry adjustment(GO:0080005)
0.5 2.8 GO:0070981 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.5 4.2 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.5 1.4 GO:0042908 xenobiotic transport(GO:0042908)
0.5 3.2 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.5 0.9 GO:1902066 regulation of cell wall pectin metabolic process(GO:1902066)
0.4 1.3 GO:0018119 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.4 2.6 GO:0043480 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.4 1.3 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.4 1.7 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.4 1.3 GO:1990884 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.4 2.5 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.4 1.6 GO:1902315 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.4 2.0 GO:0019419 sulfate reduction(GO:0019419)
0.4 6.7 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.4 2.0 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.4 1.2 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.4 1.9 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.4 1.1 GO:0031054 pre-miRNA processing(GO:0031054)
0.4 2.2 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.4 2.6 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.4 1.1 GO:1990532 stress response to nickel ion(GO:1990532)
0.4 0.7 GO:0016554 base conversion or substitution editing(GO:0016553) cytidine to uridine editing(GO:0016554)
0.4 1.4 GO:0009590 detection of gravity(GO:0009590)
0.4 0.7 GO:0051051 negative regulation of ion transport(GO:0043271) negative regulation of transport(GO:0051051)
0.4 2.5 GO:0043090 amino acid import(GO:0043090)
0.4 1.1 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.4 1.8 GO:1901006 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.3 1.4 GO:0015669 gas transport(GO:0015669)
0.3 1.4 GO:0009558 embryo sac cellularization(GO:0009558)
0.3 1.0 GO:0006348 chromatin silencing at telomere(GO:0006348)
0.3 1.0 GO:1903530 regulation of exocytosis(GO:0017157) regulation of secretion(GO:0051046) regulation of secretion by cell(GO:1903530)
0.3 4.1 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.3 2.7 GO:2000757 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.3 2.3 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.3 1.0 GO:1902446 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.3 5.0 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.3 2.3 GO:0010148 transpiration(GO:0010148)
0.3 15.1 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.3 3.0 GO:0080183 response to photooxidative stress(GO:0080183)
0.3 2.3 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.3 2.3 GO:0009610 response to symbiotic fungus(GO:0009610)
0.3 2.6 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.3 1.3 GO:0001578 microtubule bundle formation(GO:0001578)
0.3 1.3 GO:0009660 amyloplast organization(GO:0009660)
0.3 1.3 GO:0030856 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.3 0.9 GO:0071481 cellular response to X-ray(GO:0071481)
0.3 0.9 GO:0009662 etioplast organization(GO:0009662)
0.3 2.2 GO:0051127 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.3 0.9 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.3 1.8 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.3 0.9 GO:0007019 microtubule depolymerization(GO:0007019)
0.3 1.2 GO:1901600 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.3 1.5 GO:0010032 meiotic chromosome condensation(GO:0010032)
0.3 2.0 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.3 1.5 GO:0046713 borate transport(GO:0046713)
0.3 0.6 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.3 0.9 GO:0080153 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.3 0.6 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.3 0.9 GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process(GO:1990116)
0.3 1.4 GO:0090436 leaf pavement cell development(GO:0090436)
0.3 1.1 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.3 0.8 GO:0046825 regulation of protein export from nucleus(GO:0046825)
0.3 0.6 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.3 3.4 GO:0042814 monopolar cell growth(GO:0042814)
0.3 0.8 GO:0046505 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.3 1.4 GO:0071277 cellular response to calcium ion(GO:0071277)
0.3 1.7 GO:0010338 leaf formation(GO:0010338)
0.3 0.5 GO:1902969 mitotic DNA replication(GO:1902969)
0.3 1.1 GO:0016099 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.3 0.8 GO:0055047 generative cell mitosis(GO:0055047)
0.3 1.1 GO:0080026 response to indolebutyric acid(GO:0080026)
0.3 0.8 GO:0048478 DNA rewinding(GO:0036292) replication fork protection(GO:0048478)
0.3 0.5 GO:0036473 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.3 0.3 GO:0040030 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.3 1.6 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.3 2.4 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.3 2.7 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.3 2.1 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.3 1.1 GO:0006741 NADP biosynthetic process(GO:0006741)
0.3 1.1 GO:0030643 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.3 0.3 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.3 2.1 GO:1901880 negative regulation of actin filament depolymerization(GO:0030835) negative regulation of protein complex disassembly(GO:0043242) actin filament capping(GO:0051693) negative regulation of protein depolymerization(GO:1901880)
0.3 1.1 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.3 1.0 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.3 1.0 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.3 0.3 GO:0030970 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.3 4.1 GO:0006538 glutamate catabolic process(GO:0006538)
0.3 0.8 GO:0019482 uracil catabolic process(GO:0006212) beta-alanine metabolic process(GO:0019482) beta-alanine biosynthetic process(GO:0019483)
0.3 1.0 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.3 0.8 GO:2000758 positive regulation of histone acetylation(GO:0035066) positive regulation of protein acetylation(GO:1901985) positive regulation of peptidyl-lysine acetylation(GO:2000758)
0.3 1.5 GO:0048439 flower morphogenesis(GO:0048439)
0.2 1.0 GO:0042256 mature ribosome assembly(GO:0042256)
0.2 0.5 GO:0000966 RNA 5'-end processing(GO:0000966)
0.2 6.2 GO:0051260 protein homooligomerization(GO:0051260)
0.2 2.9 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.2 1.2 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.2 10.7 GO:0048510 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.2 6.5 GO:2000030 regulation of response to red or far red light(GO:2000030)
0.2 1.0 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.2 0.9 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.2 0.9 GO:0042178 xenobiotic catabolic process(GO:0042178)
0.2 0.7 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.2 0.7 GO:0043181 vacuolar sequestering(GO:0043181)
0.2 0.9 GO:0061085 regulation of histone H3-K27 methylation(GO:0061085)
0.2 4.7 GO:0009306 protein secretion(GO:0009306)
0.2 0.7 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.2 3.2 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.2 0.7 GO:0005513 detection of calcium ion(GO:0005513)
0.2 1.6 GO:0009745 sucrose mediated signaling(GO:0009745)
0.2 1.1 GO:0060148 positive regulation of posttranscriptional gene silencing(GO:0060148)
0.2 0.9 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.2 0.7 GO:0090549 response to carbon starvation(GO:0090549)
0.2 2.0 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.2 0.7 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.2 0.7 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.2 1.3 GO:2000037 regulation of stomatal complex patterning(GO:2000037)
0.2 0.9 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.2 3.5 GO:0031425 chloroplast RNA processing(GO:0031425)
0.2 0.7 GO:0009102 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.2 0.7 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.2 1.1 GO:0019323 pentose catabolic process(GO:0019323)
0.2 0.7 GO:0034969 histone arginine methylation(GO:0034969)
0.2 0.7 GO:2001294 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.2 5.5 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.2 2.4 GO:0048317 seed morphogenesis(GO:0048317)
0.2 1.1 GO:0009647 skotomorphogenesis(GO:0009647)
0.2 0.7 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.2 0.7 GO:0006528 asparagine metabolic process(GO:0006528)
0.2 0.7 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.2 2.2 GO:0000338 protein deneddylation(GO:0000338)
0.2 0.4 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
0.2 1.5 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.2 1.1 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.2 0.2 GO:0051645 Golgi localization(GO:0051645)
0.2 0.8 GO:0006729 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.2 0.8 GO:0016598 protein arginylation(GO:0016598)
0.2 2.5 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.2 0.6 GO:0033258 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.2 0.6 GO:0071763 nuclear membrane organization(GO:0071763)
0.2 1.4 GO:0010067 procambium histogenesis(GO:0010067)
0.2 0.6 GO:0010288 response to lead ion(GO:0010288)
0.2 2.6 GO:0051555 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.2 1.2 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.2 0.8 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.2 2.2 GO:0010050 vegetative phase change(GO:0010050)
0.2 1.0 GO:0043462 regulation of ATPase activity(GO:0043462)
0.2 2.7 GO:0006102 isocitrate metabolic process(GO:0006102)
0.2 1.4 GO:0009446 putrescine metabolic process(GO:0009445) putrescine biosynthetic process(GO:0009446) putrescine biosynthetic process from arginine(GO:0033388)
0.2 1.2 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.2 0.2 GO:0000050 urea cycle(GO:0000050)
0.2 0.6 GO:0010184 cytokinin transport(GO:0010184)
0.2 0.4 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.2 0.8 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.2 1.2 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.2 1.9 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.2 0.8 GO:0071415 cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.2 0.8 GO:0009557 antipodal cell differentiation(GO:0009557)
0.2 0.9 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.2 0.6 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.2 1.7 GO:0009942 longitudinal axis specification(GO:0009942)
0.2 0.7 GO:0040034 regulation of development, heterochronic(GO:0040034)
0.2 8.1 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.2 2.9 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.2 1.8 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.2 0.6 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.2 0.7 GO:0097298 regulation of nucleus size(GO:0097298)
0.2 0.4 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.2 1.5 GO:0034724 DNA replication-independent nucleosome organization(GO:0034724)
0.2 1.8 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.2 1.1 GO:0048209 regulation of vesicle targeting, to, from or within Golgi(GO:0048209)
0.2 0.5 GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000479)
0.2 0.9 GO:1901002 positive regulation of response to salt stress(GO:1901002)
0.2 0.9 GO:0009298 GDP-mannose biosynthetic process(GO:0009298)
0.2 0.9 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.2 0.7 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.2 5.0 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.2 0.9 GO:0000212 meiotic spindle organization(GO:0000212)
0.2 1.1 GO:0034204 lipid translocation(GO:0034204)
0.2 1.6 GO:0045815 positive regulation of gene expression, epigenetic(GO:0045815)
0.2 0.7 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.2 1.2 GO:0034508 centromere complex assembly(GO:0034508)
0.2 1.8 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380)
0.2 1.9 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.2 0.7 GO:0009957 epidermal cell fate specification(GO:0009957)
0.2 4.1 GO:0006614 cotranslational protein targeting to membrane(GO:0006613) SRP-dependent cotranslational protein targeting to membrane(GO:0006614)
0.2 1.9 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.2 0.5 GO:0031538 negative regulation of anthocyanin metabolic process(GO:0031538)
0.2 0.8 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.2 5.4 GO:0051667 chloroplast relocation(GO:0009902) chloroplast localization(GO:0019750) plastid localization(GO:0051644) establishment of plastid localization(GO:0051667)
0.2 2.0 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.2 8.3 GO:0072665 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.2 0.3 GO:0072598 protein localization to chloroplast(GO:0072598)
0.2 0.5 GO:0002100 tRNA wobble adenosine to inosine editing(GO:0002100)
0.2 1.0 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 0.3 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.2 1.6 GO:0006749 glutathione metabolic process(GO:0006749)
0.2 0.5 GO:0010447 response to acidic pH(GO:0010447)
0.2 0.6 GO:0015959 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.2 2.9 GO:0080156 mitochondrial mRNA modification(GO:0080156)
0.2 0.6 GO:0043903 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of viral process(GO:0050792)
0.2 0.6 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.2 0.6 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.2 4.2 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.2 1.1 GO:0042793 transcription from plastid promoter(GO:0042793)
0.2 3.3 GO:0008356 asymmetric cell division(GO:0008356)
0.2 3.1 GO:0010167 response to nitrate(GO:0010167)
0.2 1.4 GO:0010165 response to X-ray(GO:0010165)
0.2 0.2 GO:0010065 primary meristem tissue development(GO:0010065)
0.2 0.5 GO:0015786 GDP-fucose transport(GO:0015783) UDP-glucose transport(GO:0015786)
0.2 0.5 GO:1990641 response to iron ion starvation(GO:1990641)
0.2 6.4 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.2 0.6 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 0.8 GO:0080121 AMP transport(GO:0080121)
0.1 0.6 GO:0034367 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.1 1.5 GO:0045116 protein neddylation(GO:0045116)
0.1 1.3 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 0.4 GO:0048873 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.1 1.5 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.1 1.9 GO:2000023 regulation of lateral root development(GO:2000023)
0.1 0.7 GO:0000055 ribosomal large subunit export from nucleus(GO:0000055)
0.1 0.6 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 2.0 GO:0043248 proteasome assembly(GO:0043248)
0.1 0.6 GO:0019474 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.1 0.4 GO:0043268 positive regulation of potassium ion transport(GO:0043268)
0.1 1.0 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.1 9.1 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.1 0.8 GO:0009303 rRNA transcription(GO:0009303)
0.1 0.6 GO:0048530 fruit morphogenesis(GO:0048530)
0.1 2.5 GO:0009585 phototransduction(GO:0007602) red, far-red light phototransduction(GO:0009585)
0.1 0.4 GO:0009093 cysteine catabolic process(GO:0009093)
0.1 0.4 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.1 6.8 GO:0009631 cold acclimation(GO:0009631)
0.1 0.8 GO:0042391 regulation of membrane potential(GO:0042391)
0.1 0.8 GO:0046473 phosphatidic acid metabolic process(GO:0046473)
0.1 0.4 GO:0043157 response to cation stress(GO:0043157)
0.1 0.8 GO:0043489 RNA stabilization(GO:0043489)
0.1 1.8 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.1 2.6 GO:0055075 potassium ion homeostasis(GO:0055075)
0.1 4.3 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.1 2.1 GO:0010109 regulation of photosynthesis(GO:0010109)
0.1 0.4 GO:0015800 acidic amino acid transport(GO:0015800)
0.1 0.8 GO:0016926 protein desumoylation(GO:0016926)
0.1 0.7 GO:0007142 male meiosis II(GO:0007142)
0.1 1.0 GO:0031125 rRNA 3'-end processing(GO:0031125)
0.1 4.0 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.1 0.8 GO:0045851 pH reduction(GO:0045851)
0.1 0.6 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.1 0.1 GO:0042040 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)
0.1 0.1 GO:0051101 regulation of DNA binding(GO:0051101)
0.1 2.5 GO:0016117 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.1 0.4 GO:0019343 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) cysteine biosynthetic process via cystathionine(GO:0019343) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.1 2.3 GO:0000373 Group II intron splicing(GO:0000373)
0.1 0.4 GO:0036265 RNA (guanine-N7)-methylation(GO:0036265) rRNA (guanine-N7)-methylation(GO:0070476)
0.1 0.5 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.1 1.0 GO:0016444 somatic cell DNA recombination(GO:0016444)
0.1 1.0 GO:0042182 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.1 2.5 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.1 1.7 GO:0010332 response to gamma radiation(GO:0010332)
0.1 3.7 GO:0006612 protein targeting to membrane(GO:0006612)
0.1 2.1 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 0.5 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.1 2.7 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.1 0.4 GO:0060919 auxin influx(GO:0060919)
0.1 1.3 GO:1902074 response to salt(GO:1902074)
0.1 0.4 GO:0048442 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 3.4 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.1 0.5 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.1 0.6 GO:0043486 histone exchange(GO:0043486)
0.1 0.3 GO:0070127 seryl-tRNA aminoacylation(GO:0006434) tRNA aminoacylation for mitochondrial protein translation(GO:0070127) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.1 0.5 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.1 0.3 GO:0045739 positive regulation of DNA repair(GO:0045739)
0.1 0.3 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.1 0.2 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.1 0.8 GO:0055070 copper ion homeostasis(GO:0055070)
0.1 0.4 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.1 0.4 GO:0010508 positive regulation of autophagy(GO:0010508)
0.1 0.4 GO:0051569 regulation of histone H3-K4 methylation(GO:0051569)
0.1 2.6 GO:0080022 primary root development(GO:0080022)
0.1 0.4 GO:1903321 negative regulation of protein modification by small protein conjugation or removal(GO:1903321)
0.1 0.6 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.1 0.3 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.1 0.3 GO:0042126 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.1 3.7 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.1 2.4 GO:0071472 cellular response to salt stress(GO:0071472)
0.1 1.6 GO:0010039 response to iron ion(GO:0010039)
0.1 2.0 GO:0051788 response to misfolded protein(GO:0051788) cellular response to misfolded protein(GO:0071218)
0.1 0.5 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.1 0.9 GO:0006734 NADH metabolic process(GO:0006734)
0.1 0.5 GO:0009635 response to herbicide(GO:0009635)
0.1 0.5 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.1 0.1 GO:0048863 stem cell differentiation(GO:0048863) regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.1 0.7 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.1 1.1 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.1 4.1 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.1 0.4 GO:0051189 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.1 1.1 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.1 0.4 GO:0006409 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 1.0 GO:0010206 photosystem II repair(GO:0010206)
0.1 1.8 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.1 1.0 GO:0051443 positive regulation of ubiquitin-protein transferase activity(GO:0051443) positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.1 1.0 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.1 0.8 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.1 0.2 GO:0000256 allantoin catabolic process(GO:0000256)
0.1 0.3 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.6 GO:0070212 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.1 0.4 GO:0006065 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.1 1.1 GO:0016559 peroxisome fission(GO:0016559)
0.1 4.4 GO:0002181 cytoplasmic translation(GO:0002181)
0.1 0.7 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.1 0.6 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.1 0.3 GO:0030100 regulation of endocytosis(GO:0030100)
0.1 0.9 GO:0006596 polyamine biosynthetic process(GO:0006596)
0.1 1.2 GO:0009704 de-etiolation(GO:0009704)
0.1 0.3 GO:0006750 glutathione biosynthetic process(GO:0006750) nonribosomal peptide biosynthetic process(GO:0019184)
0.1 0.9 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.1 0.5 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 1.1 GO:0010540 basipetal auxin transport(GO:0010540)
0.1 0.9 GO:0048017 phosphatidylinositol-mediated signaling(GO:0048015) inositol lipid-mediated signaling(GO:0048017)
0.1 0.9 GO:0006112 glycogen metabolic process(GO:0005977) energy reserve metabolic process(GO:0006112)
0.1 0.9 GO:0009649 entrainment of circadian clock(GO:0009649)
0.1 2.9 GO:0042594 response to starvation(GO:0042594)
0.1 0.7 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 2.1 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.1 2.5 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.1 1.8 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.1 2.7 GO:0010143 cutin biosynthetic process(GO:0010143)
0.1 1.7 GO:0030042 actin filament depolymerization(GO:0030042)
0.1 0.5 GO:0015857 pyrimidine nucleobase transport(GO:0015855) uracil transport(GO:0015857)
0.1 0.3 GO:1904356 regulation of telomere maintenance via telomerase(GO:0032210) regulation of telomere maintenance via telomere lengthening(GO:1904356) negative regulation of DNA biosynthetic process(GO:2000279)
0.1 0.8 GO:1902182 shoot apical meristem development(GO:1902182)
0.1 0.7 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.1 0.5 GO:0031056 regulation of histone modification(GO:0031056)
0.1 0.4 GO:0072599 protein targeting to ER(GO:0045047) establishment of protein localization to endoplasmic reticulum(GO:0072599)
0.1 0.4 GO:0010155 regulation of proton transport(GO:0010155)
0.1 0.5 GO:0002697 regulation of immune effector process(GO:0002697) regulation of defense response to virus(GO:0050688)
0.1 1.4 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.1 0.8 GO:0044003 modification of morphology or physiology of other organism(GO:0035821) modification by symbiont of host morphology or physiology(GO:0044003) modification of morphology or physiology of other organism involved in symbiotic interaction(GO:0051817)
0.1 0.4 GO:0071715 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.1 0.3 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.1 0.7 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.1 0.3 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.1 2.5 GO:0006338 chromatin remodeling(GO:0006338)
0.1 0.4 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.1 1.0 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 2.2 GO:0010286 heat acclimation(GO:0010286)
0.1 1.3 GO:0031167 rRNA methylation(GO:0031167)
0.1 0.5 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.1 0.2 GO:1900032 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.1 0.3 GO:0015693 magnesium ion transport(GO:0015693)
0.1 0.9 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 1.1 GO:0042631 cellular response to water deprivation(GO:0042631) cellular response to water stimulus(GO:0071462)
0.1 0.6 GO:0042177 negative regulation of protein catabolic process(GO:0042177)
0.1 0.5 GO:0010375 stomatal complex patterning(GO:0010375)
0.1 0.1 GO:0018279 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.1 0.4 GO:0000919 cell plate assembly(GO:0000919)
0.1 2.0 GO:0042026 protein refolding(GO:0042026)
0.1 0.8 GO:0006265 DNA topological change(GO:0006265)
0.1 0.7 GO:0033108 mitochondrial respiratory chain complex assembly(GO:0033108)
0.1 0.7 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.1 0.7 GO:1990069 stomatal opening(GO:1990069)
0.1 0.3 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.1 0.3 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.1 0.2 GO:0043171 peptide catabolic process(GO:0043171)
0.1 2.8 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.1 7.5 GO:0006457 protein folding(GO:0006457)
0.1 0.6 GO:0010082 regulation of root meristem growth(GO:0010082)
0.1 1.7 GO:0007030 Golgi organization(GO:0007030)
0.1 1.3 GO:0009395 phospholipid catabolic process(GO:0009395)
0.1 0.7 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.1 1.6 GO:0022904 respiratory electron transport chain(GO:0022904)
0.1 0.3 GO:0015691 cadmium ion transport(GO:0015691)
0.1 0.5 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.1 2.4 GO:0009910 negative regulation of flower development(GO:0009910)
0.1 1.0 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.1 0.9 GO:0010215 cellulose microfibril organization(GO:0010215)
0.1 0.6 GO:0016131 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.1 0.1 GO:0035308 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.1 1.5 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.1 0.5 GO:0034311 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.1 0.2 GO:0043982 histone H4-K8 acetylation(GO:0043982)
0.1 0.6 GO:0009088 threonine biosynthetic process(GO:0009088)
0.1 0.2 GO:0043247 protection from non-homologous end joining at telomere(GO:0031848) telomere maintenance in response to DNA damage(GO:0043247)
0.1 0.1 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.1 0.6 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.1 3.0 GO:0042176 regulation of protein catabolic process(GO:0042176)
0.1 0.1 GO:0006501 C-terminal protein lipidation(GO:0006501) C-terminal protein amino acid modification(GO:0018410)
0.1 0.2 GO:1900363 regulation of mRNA polyadenylation(GO:1900363)
0.1 2.5 GO:0043038 amino acid activation(GO:0043038) tRNA aminoacylation(GO:0043039)
0.1 1.9 GO:0042023 DNA endoreduplication(GO:0042023)
0.1 0.2 GO:0006561 proline biosynthetic process(GO:0006561)
0.1 0.6 GO:0010017 red or far-red light signaling pathway(GO:0010017) cellular response to red or far red light(GO:0071489)
0.1 0.5 GO:0071248 cellular response to metal ion(GO:0071248)
0.1 0.2 GO:0042304 regulation of fatty acid biosynthetic process(GO:0042304)
0.1 1.6 GO:0051225 spindle assembly(GO:0051225)
0.1 0.9 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.1 0.4 GO:0006828 manganese ion transport(GO:0006828)
0.1 0.4 GO:0010088 phloem development(GO:0010088)
0.1 0.5 GO:0010089 xylem development(GO:0010089)
0.1 0.2 GO:0006678 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.1 1.4 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.1 0.5 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 0.8 GO:0006270 DNA replication initiation(GO:0006270)
0.1 0.4 GO:0042274 ribosomal small subunit biogenesis(GO:0042274)
0.1 0.2 GO:0046386 deoxyribonucleoside triphosphate catabolic process(GO:0009204) deoxyribose phosphate catabolic process(GO:0046386)
0.1 0.5 GO:0006771 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.1 0.5 GO:0009089 lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.1 0.6 GO:0016556 mRNA modification(GO:0016556)
0.1 1.0 GO:0032543 mitochondrial translation(GO:0032543)
0.0 2.0 GO:0016485 protein processing(GO:0016485)
0.0 0.5 GO:1990937 xylan acetylation(GO:1990937)
0.0 0.3 GO:0080190 lateral growth(GO:0080190)
0.0 0.1 GO:0042325 regulation of phosphorylation(GO:0042325)
0.0 1.0 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 2.1 GO:0006972 hyperosmotic response(GO:0006972)
0.0 3.4 GO:0006364 rRNA processing(GO:0006364)
0.0 0.3 GO:0009396 folic acid-containing compound biosynthetic process(GO:0009396)
0.0 1.4 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.5 GO:0044030 regulation of DNA methylation(GO:0044030)
0.0 0.5 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.0 0.8 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.0 3.3 GO:0016579 protein deubiquitination(GO:0016579)
0.0 1.8 GO:0010119 regulation of stomatal movement(GO:0010119)
0.0 3.0 GO:0010941 regulation of cell death(GO:0010941)
0.0 5.9 GO:0009451 RNA modification(GO:0009451)
0.0 1.1 GO:0010197 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.2 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.2 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.0 0.7 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.3 GO:0010262 somatic embryogenesis(GO:0010262)
0.0 2.4 GO:0007005 mitochondrion organization(GO:0007005)
0.0 0.5 GO:0010218 response to far red light(GO:0010218)
0.0 0.2 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 2.0 GO:0007018 microtubule-based movement(GO:0007018)
0.0 2.7 GO:0015979 photosynthesis(GO:0015979)
0.0 0.1 GO:0090332 stomatal closure(GO:0090332)
0.0 0.6 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.3 GO:0036065 fucosylation(GO:0036065)
0.0 1.4 GO:0000209 protein polyubiquitination(GO:0000209)
0.0 1.3 GO:0006897 endocytosis(GO:0006897)
0.0 0.1 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.0 0.8 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.0 0.9 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 1.2 GO:0009637 response to blue light(GO:0009637)
0.0 0.5 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.0 0.1 GO:0010062 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of cell fate commitment(GO:0010454) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.0 9.9 GO:0043043 peptide biosynthetic process(GO:0043043)
0.0 0.8 GO:0042127 regulation of cell proliferation(GO:0042127)
0.0 0.2 GO:0032973 amino acid export(GO:0032973)
0.0 0.4 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.0 0.6 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.0 0.4 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 1.0 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.1 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 0.1 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.0 0.3 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 0.3 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.0 0.3 GO:0015986 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.0 0.0 GO:0055122 response to very low light intensity stimulus(GO:0055122)
0.0 0.4 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.0 0.8 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.0 0.4 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 1.1 GO:0006081 cellular aldehyde metabolic process(GO:0006081)
0.0 0.6 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 1.0 GO:0006090 pyruvate metabolic process(GO:0006090)
0.0 0.8 GO:0090305 nucleic acid phosphodiester bond hydrolysis(GO:0090305)
0.0 1.5 GO:0009658 chloroplast organization(GO:0009658)
0.0 0.1 GO:1900457 regulation of brassinosteroid mediated signaling pathway(GO:1900457)
0.0 0.1 GO:0000023 maltose metabolic process(GO:0000023)
0.0 0.4 GO:0034968 histone lysine methylation(GO:0034968)
0.0 0.5 GO:0006383 transcription from RNA polymerase III promoter(GO:0006383)
0.0 0.0 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.6 GO:0006305 DNA alkylation(GO:0006305) DNA methylation(GO:0006306)
0.0 0.1 GO:2000067 regulation of root morphogenesis(GO:2000067)
0.0 0.1 GO:0044000 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) transport of virus(GO:0046794) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.1 GO:0015936 coenzyme A metabolic process(GO:0015936)
0.0 0.1 GO:0006517 protein deglycosylation(GO:0006517)
0.0 0.0 GO:0006747 FAD biosynthetic process(GO:0006747) FAD metabolic process(GO:0046443) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.0 0.3 GO:0018394 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.0 0.1 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.0 0.7 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.2 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.0 1.1 GO:0007017 microtubule-based process(GO:0007017)
0.0 0.1 GO:0007130 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.0 0.1 GO:0006552 leucine catabolic process(GO:0006552)
0.0 2.5 GO:0046777 protein autophosphorylation(GO:0046777)
0.0 0.5 GO:0010090 trichome morphogenesis(GO:0010090)
0.0 11.1 GO:0006468 protein phosphorylation(GO:0006468)
0.0 0.1 GO:0010449 root meristem growth(GO:0010449)
0.0 0.3 GO:0009749 response to glucose(GO:0009749)
0.0 0.0 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.0 0.1 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.0 0.2 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.0 0.1 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 0.0 GO:0090056 positive regulation of cofactor metabolic process(GO:0051194) regulation of chlorophyll metabolic process(GO:0090056) regulation of tetrapyrrole metabolic process(GO:1901401) positive regulation of tetrapyrrole metabolic process(GO:1901403)
0.0 0.3 GO:0009853 photorespiration(GO:0009853)
0.0 0.1 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.6 GO:0009411 response to UV(GO:0009411)
0.0 0.1 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.0 0.4 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 0.1 GO:0015824 proline transport(GO:0015824)
0.0 0.1 GO:0006730 one-carbon metabolic process(GO:0006730)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.3 GO:0005785 signal recognition particle receptor complex(GO:0005785)
0.6 1.8 GO:0016328 lateral plasma membrane(GO:0016328)
0.5 1.0 GO:0042788 polysomal ribosome(GO:0042788)
0.5 2.0 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.5 1.0 GO:0045254 pyruvate dehydrogenase complex(GO:0045254)
0.5 2.4 GO:0030286 dynein complex(GO:0030286)
0.4 3.0 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.4 1.3 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.4 6.4 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.4 1.2 GO:0035101 FACT complex(GO:0035101)
0.4 4.1 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.3 0.7 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.3 3.7 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.3 5.1 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.3 3.0 GO:0017119 Golgi transport complex(GO:0017119)
0.3 1.5 GO:0034515 proteasome storage granule(GO:0034515)
0.3 1.2 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.3 0.9 GO:1990112 RQC complex(GO:1990112)
0.3 0.8 GO:0043186 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.3 2.7 GO:0031209 SCAR complex(GO:0031209)
0.3 1.1 GO:0008278 cohesin complex(GO:0008278)
0.3 15.3 GO:0009707 chloroplast outer membrane(GO:0009707)
0.3 1.5 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.3 2.3 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.3 2.3 GO:0009368 endopeptidase Clp complex(GO:0009368)
0.2 1.5 GO:0000796 condensin complex(GO:0000796)
0.2 1.7 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.2 1.0 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.2 3.5 GO:0000229 cytoplasmic chromosome(GO:0000229)
0.2 0.7 GO:0030684 preribosome(GO:0030684)
0.2 0.9 GO:0009509 chromoplast(GO:0009509)
0.2 1.7 GO:0005677 chromatin silencing complex(GO:0005677)
0.2 1.3 GO:0044545 NSL complex(GO:0044545)
0.2 1.2 GO:0009360 DNA polymerase III complex(GO:0009360)
0.2 2.0 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.2 0.6 GO:0033281 TAT protein transport complex(GO:0033281)
0.2 1.2 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.2 3.9 GO:0035097 histone methyltransferase complex(GO:0035097)
0.2 1.7 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.2 0.8 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.2 1.0 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.2 3.3 GO:0008023 transcription elongation factor complex(GO:0008023)
0.2 3.3 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.2 8.1 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.2 1.0 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.2 0.5 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.2 0.7 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.2 4.0 GO:0005871 kinesin complex(GO:0005871)
0.2 0.3 GO:0055037 recycling endosome(GO:0055037)
0.2 1.6 GO:0042555 MCM complex(GO:0042555)
0.2 1.4 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.2 1.6 GO:0035861 site of double-strand break(GO:0035861)
0.2 1.1 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.2 3.3 GO:0009574 preprophase band(GO:0009574)
0.2 0.5 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.1 0.4 GO:0034457 Mpp10 complex(GO:0034457)
0.1 6.4 GO:0016592 mediator complex(GO:0016592)
0.1 0.7 GO:0005782 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1 0.9 GO:0035145 exon-exon junction complex(GO:0035145)
0.1 2.8 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 1.4 GO:0010168 ER body(GO:0010168)
0.1 2.5 GO:0031965 nuclear membrane(GO:0031965)
0.1 1.4 GO:0000776 kinetochore(GO:0000776)
0.1 5.2 GO:0000137 Golgi cis cisterna(GO:0000137)
0.1 7.9 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 1.0 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 1.7 GO:0008180 COP9 signalosome(GO:0008180)
0.1 1.4 GO:0070461 SAGA-type complex(GO:0070461)
0.1 0.5 GO:0000811 GINS complex(GO:0000811)
0.1 1.3 GO:0016272 prefoldin complex(GO:0016272)
0.1 17.7 GO:0000790 nuclear chromatin(GO:0000790)
0.1 0.4 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.1 0.7 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1 0.8 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.1 1.6 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.1 13.3 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.1 1.0 GO:0070531 BRCA1-A complex(GO:0070531)
0.1 0.5 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.1 25.4 GO:0022626 cytosolic ribosome(GO:0022626)
0.1 1.2 GO:0030686 90S preribosome(GO:0030686)
0.1 0.8 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.1 0.9 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.1 0.8 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.1 1.6 GO:0048500 signal recognition particle(GO:0048500)
0.1 1.4 GO:0045283 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.1 0.9 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.1 0.4 GO:0032807 DNA ligase IV complex(GO:0032807)
0.1 0.4 GO:0043076 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.1 1.2 GO:0030131 clathrin adaptor complex(GO:0030131)
0.1 1.2 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.1 0.7 GO:0005753 mitochondrial proton-transporting ATP synthase complex(GO:0005753)
0.1 0.7 GO:0030897 HOPS complex(GO:0030897)
0.1 10.0 GO:0005667 transcription factor complex(GO:0005667)
0.1 0.6 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.1 0.5 GO:0005845 mRNA cap binding complex(GO:0005845)
0.1 0.4 GO:0031298 replication fork protection complex(GO:0031298)
0.1 0.6 GO:0044815 DNA packaging complex(GO:0044815)
0.1 0.9 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.1 0.6 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 5.2 GO:0005635 nuclear envelope(GO:0005635)
0.1 0.7 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 3.3 GO:0009504 cell plate(GO:0009504)
0.1 2.4 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 8.6 GO:0016604 nuclear body(GO:0016604)
0.1 1.2 GO:0045298 tubulin complex(GO:0045298)
0.1 0.9 GO:1902554 serine/threonine protein kinase complex(GO:1902554)
0.1 1.7 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.1 0.2 GO:0030904 retromer complex(GO:0030904)
0.1 2.2 GO:0055028 cortical microtubule(GO:0055028)
0.1 1.0 GO:0048226 Casparian strip(GO:0048226)
0.1 1.2 GO:0005819 spindle(GO:0005819)
0.1 1.0 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.1 1.2 GO:0034399 nuclear periphery(GO:0034399)
0.1 1.2 GO:0000784 chromosome, telomeric region(GO:0000781) nuclear chromosome, telomeric region(GO:0000784)
0.1 0.4 GO:0071007 U2-type catalytic step 2 spliceosome(GO:0071007)
0.1 0.5 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.1 2.0 GO:0005875 microtubule associated complex(GO:0005875)
0.1 1.7 GO:0005680 anaphase-promoting complex(GO:0005680)
0.1 0.8 GO:0072546 ER membrane protein complex(GO:0072546)
0.1 1.2 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.1 0.4 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 0.9 GO:0015935 small ribosomal subunit(GO:0015935)
0.1 1.2 GO:0022624 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.1 2.7 GO:0005764 lysosome(GO:0005764)
0.1 1.9 GO:0009524 phragmoplast(GO:0009524)
0.1 7.7 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.1 15.8 GO:0009579 thylakoid(GO:0009579)
0.1 0.7 GO:0005682 U5 snRNP(GO:0005682)
0.1 1.1 GO:0032040 small-subunit processome(GO:0032040)
0.1 1.1 GO:0016459 myosin complex(GO:0016459)
0.1 3.7 GO:0005770 late endosome(GO:0005770)
0.1 0.2 GO:0016323 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 2.4 GO:0010319 stromule(GO:0010319)
0.1 0.3 GO:0034657 GID complex(GO:0034657)
0.1 0.2 GO:0031417 N-terminal protein acetyltransferase complex(GO:0031414) NatC complex(GO:0031417)
0.1 0.4 GO:0005787 signal peptidase complex(GO:0005787)
0.1 0.3 GO:0035619 root hair tip(GO:0035619)
0.1 0.4 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.1 0.4 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.1 1.6 GO:0016591 DNA-directed RNA polymerase II, holoenzyme(GO:0016591)
0.1 0.8 GO:0019898 extrinsic component of membrane(GO:0019898)
0.1 13.7 GO:0005730 nucleolus(GO:0005730)
0.1 0.3 GO:0030127 COPII vesicle coat(GO:0030127)
0.1 1.0 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.1 1.3 GO:0030117 membrane coat(GO:0030117) coated membrane(GO:0048475)
0.1 31.7 GO:0009532 plastid stroma(GO:0009532)
0.1 0.3 GO:0030141 secretory granule(GO:0030141)
0.1 1.2 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.1 11.2 GO:0005802 trans-Golgi network(GO:0005802)
0.1 1.8 GO:0000145 exocyst(GO:0000145)
0.1 2.2 GO:0005795 Golgi stack(GO:0005795)
0.0 0.3 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 113.5 GO:0005829 cytosol(GO:0005829)
0.0 0.1 GO:0005769 early endosome(GO:0005769)
0.0 1.8 GO:0045271 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.2 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 7.0 GO:0042579 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.1 GO:0034045 pre-autophagosomal structure membrane(GO:0034045) Atg12-Atg5-Atg16 complex(GO:0034274)
0.0 0.2 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 0.8 GO:0030134 ER to Golgi transport vesicle(GO:0030134)
0.0 0.1 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.0 0.6 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.2 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 1.2 GO:0010008 endosome membrane(GO:0010008)
0.0 0.1 GO:0097196 Shu complex(GO:0097196)
0.0 0.2 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 90.0 GO:0009536 plastid(GO:0009536)
0.0 2.9 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.0 0.2 GO:0031201 SNARE complex(GO:0031201)
0.0 0.5 GO:0015630 microtubule cytoskeleton(GO:0015630)
0.0 1.0 GO:0044217 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 26.4 GO:0005886 plasma membrane(GO:0005886)
0.0 0.1 GO:0000445 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.1 8.4 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
1.1 4.5 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.9 4.7 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.9 2.8 GO:0004071 aspartate-ammonia ligase activity(GO:0004071)
0.9 2.7 GO:0046422 violaxanthin de-epoxidase activity(GO:0046422)
0.8 4.8 GO:0004121 cystathionine beta-lyase activity(GO:0004121)
0.8 2.3 GO:0030275 LRR domain binding(GO:0030275)
0.7 2.1 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.7 6.7 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.7 0.7 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.6 1.9 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.6 2.6 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.6 1.9 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.6 3.0 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.6 2.4 GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.6 3.9 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.5 1.6 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.5 5.9 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.5 1.6 GO:0070336 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.5 2.1 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.5 1.6 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.5 3.6 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.5 1.9 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.5 2.4 GO:0045502 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.5 1.9 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.5 2.4 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.5 1.4 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.5 4.1 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.4 1.3 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.4 1.7 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.4 2.6 GO:0030544 Hsp70 protein binding(GO:0030544)
0.4 1.3 GO:0004775 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.4 1.7 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.4 2.5 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.4 1.3 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.4 1.7 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.4 1.2 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.4 3.2 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.4 2.8 GO:0080115 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.4 2.8 GO:0005047 signal recognition particle binding(GO:0005047)
0.4 1.2 GO:0022858 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.4 3.1 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.4 1.2 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.4 2.7 GO:0004567 beta-mannosidase activity(GO:0004567)
0.4 2.7 GO:0050897 cobalt ion binding(GO:0050897)
0.4 3.0 GO:0004738 pyruvate dehydrogenase activity(GO:0004738)
0.4 2.2 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.4 1.1 GO:0017022 myosin binding(GO:0017022)
0.3 12.0 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.3 1.4 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.3 2.1 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.3 2.0 GO:0009884 cytokinin receptor activity(GO:0009884)
0.3 2.3 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.3 1.0 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.3 2.0 GO:0030527 structural constituent of chromatin(GO:0030527)
0.3 2.0 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.3 1.0 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.3 2.6 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.3 7.1 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.3 3.6 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.3 1.0 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.3 2.9 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.3 4.1 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.3 1.9 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.3 2.2 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.3 2.4 GO:0019137 thioglucosidase activity(GO:0019137)
0.3 1.8 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.3 1.2 GO:0046481 digalactosyldiacylglycerol synthase activity(GO:0046481)
0.3 1.2 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.3 1.5 GO:0034511 U3 snoRNA binding(GO:0034511)
0.3 1.2 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.3 3.3 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.3 0.9 GO:0019788 NEDD8 transferase activity(GO:0019788)
0.3 0.9 GO:0005344 oxygen transporter activity(GO:0005344)
0.3 0.9 GO:0000824 inositol-1,4,5-trisphosphate 6-kinase activity(GO:0000823) inositol tetrakisphosphate 3-kinase activity(GO:0000824) inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440) inositol tetrakisphosphate 5-kinase activity(GO:0047326)
0.3 1.5 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.3 2.5 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.3 1.1 GO:0016433 rRNA (adenine) methyltransferase activity(GO:0016433)
0.3 1.1 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.3 0.5 GO:0048365 Rac GTPase binding(GO:0048365)
0.3 4.4 GO:0035064 methylated histone binding(GO:0035064)
0.3 1.8 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.3 1.5 GO:0016312 inositol bisphosphate phosphatase activity(GO:0016312)
0.3 2.8 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.3 0.8 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.2 1.0 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.2 1.2 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.2 4.6 GO:0008536 Ran GTPase binding(GO:0008536)
0.2 1.7 GO:0010485 H4 histone acetyltransferase activity(GO:0010485)
0.2 3.4 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.2 1.0 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.2 0.7 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.2 0.9 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.2 1.4 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.2 0.7 GO:0016842 amidine-lyase activity(GO:0016842)
0.2 0.7 GO:0030941 chloroplast targeting sequence binding(GO:0030941)
0.2 1.1 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.2 0.7 GO:0016504 peptidase activator activity(GO:0016504)
0.2 1.1 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.2 0.9 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.2 0.9 GO:0070034 telomerase RNA binding(GO:0070034)
0.2 1.1 GO:0016768 spermine synthase activity(GO:0016768)
0.2 0.9 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.2 0.7 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.2 2.2 GO:0072349 modified amino acid transmembrane transporter activity(GO:0072349)
0.2 0.7 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.2 1.1 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.2 0.9 GO:0019156 isoamylase activity(GO:0019156)
0.2 0.9 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.2 0.8 GO:0004057 arginyltransferase activity(GO:0004057)
0.2 0.6 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.2 1.9 GO:0008083 growth factor activity(GO:0008083)
0.2 2.7 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.2 1.0 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.2 0.4 GO:0003777 microtubule motor activity(GO:0003777)
0.2 1.0 GO:0070139 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.2 4.7 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.2 1.4 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.2 1.0 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.2 0.6 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.2 1.0 GO:0004594 pantothenate kinase activity(GO:0004594)
0.2 5.1 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.2 1.3 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.2 2.5 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.2 2.3 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.2 2.1 GO:2001070 starch binding(GO:2001070)
0.2 0.6 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.2 1.3 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.2 1.1 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.2 0.5 GO:0008481 sphinganine kinase activity(GO:0008481)
0.2 0.5 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.2 0.9 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.2 2.0 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.2 0.5 GO:0070678 preprotein binding(GO:0070678)
0.2 18.1 GO:0051082 unfolded protein binding(GO:0051082)
0.2 0.9 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.2 1.2 GO:0045431 flavonol synthase activity(GO:0045431)
0.2 2.6 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.2 0.5 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.2 0.7 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.2 0.7 GO:0019825 oxygen binding(GO:0019825)
0.2 3.4 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.2 0.5 GO:0050997 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.2 0.8 GO:0030267 glyoxylate reductase (NADP) activity(GO:0030267)
0.2 1.3 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.2 1.0 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.2 2.3 GO:0051087 chaperone binding(GO:0051087)
0.2 0.7 GO:0008469 histone-arginine N-methyltransferase activity(GO:0008469)
0.2 7.5 GO:0003713 transcription coactivator activity(GO:0003713)
0.2 3.1 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.2 0.5 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.2 1.3 GO:0005536 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.2 0.5 GO:0004046 aminoacylase activity(GO:0004046)
0.2 9.7 GO:0043621 protein self-association(GO:0043621)
0.2 1.1 GO:0050551 myrcene synthase activity(GO:0050551)
0.2 0.5 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.2 3.1 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.2 2.9 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.2 2.5 GO:0051117 ATPase binding(GO:0051117)
0.2 7.2 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.2 0.9 GO:0004448 isocitrate dehydrogenase activity(GO:0004448) isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.2 2.0 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.2 0.6 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.2 0.8 GO:0030371 translation repressor activity(GO:0030371)
0.2 0.8 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.1 0.6 GO:0004075 biotin carboxylase activity(GO:0004075)
0.1 0.4 GO:0015026 coreceptor activity(GO:0015026)
0.1 0.9 GO:0050302 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.1 2.8 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 2.0 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 0.6 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 1.6 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.1 0.6 GO:0016840 carbon-nitrogen lyase activity(GO:0016840)
0.1 0.6 GO:0016751 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.1 2.7 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 2.0 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.5 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.1 10.6 GO:0003724 RNA helicase activity(GO:0003724)
0.1 4.3 GO:0005267 potassium channel activity(GO:0005267)
0.1 2.6 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.1 3.9 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.1 0.5 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.1 6.3 GO:0008320 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.1 0.4 GO:0004477 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.1 0.4 GO:0016435 rRNA (guanine) methyltransferase activity(GO:0016435)
0.1 1.1 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 0.9 GO:0016151 nickel cation binding(GO:0016151)
0.1 0.2 GO:0004766 spermidine synthase activity(GO:0004766)
0.1 0.4 GO:0036310 annealing helicase activity(GO:0036310)
0.1 1.7 GO:0030515 snoRNA binding(GO:0030515)
0.1 0.8 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.8 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 0.4 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 0.5 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.1 1.1 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.1 2.7 GO:0060090 binding, bridging(GO:0060090)
0.1 4.8 GO:0019843 rRNA binding(GO:0019843)
0.1 0.7 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.1 0.6 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.3 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.1 1.3 GO:0010857 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.1 0.3 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.1 1.2 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.1 0.5 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.1 1.2 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 0.3 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.1 0.4 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.1 4.4 GO:0004707 MAP kinase activity(GO:0004707)
0.1 1.2 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.1 0.6 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.1 0.9 GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor(GO:0016624)
0.1 1.1 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.1 1.0 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.1 1.9 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.1 0.8 GO:0019903 protein phosphatase binding(GO:0019903)
0.1 4.0 GO:0008422 beta-glucosidase activity(GO:0008422)
0.1 0.7 GO:0052854 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.1 0.2 GO:0008144 drug binding(GO:0008144)
0.1 0.5 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.1 0.4 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.1 2.8 GO:0097602 cullin family protein binding(GO:0097602)
0.1 0.5 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.1 1.9 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 1.3 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 0.3 GO:0008821 crossover junction endodeoxyribonuclease activity(GO:0008821)
0.1 0.3 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.1 0.3 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.1 0.8 GO:0002020 protease binding(GO:0002020)
0.1 0.7 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.1 1.0 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.1 0.3 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.1 3.1 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.1 0.9 GO:0019887 protein kinase regulator activity(GO:0019887)
0.1 0.7 GO:0008022 protein C-terminus binding(GO:0008022)
0.1 0.3 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.1 1.2 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 2.2 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 0.4 GO:0016034 maleylacetoacetate isomerase activity(GO:0016034)
0.1 11.6 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 0.8 GO:0016849 phosphorus-oxygen lyase activity(GO:0016849)
0.1 0.4 GO:0008301 DNA binding, bending(GO:0008301)
0.1 0.8 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.1 2.1 GO:0031386 protein tag(GO:0031386)
0.1 19.5 GO:0003735 structural constituent of ribosome(GO:0003735)
0.1 0.1 GO:0004352 glutamate dehydrogenase (NAD+) activity(GO:0004352)
0.1 0.9 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.1 0.3 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 13.9 GO:0043531 ADP binding(GO:0043531)
0.1 8.0 GO:0051015 actin filament binding(GO:0051015)
0.1 0.3 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 1.3 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.1 0.7 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.1 0.3 GO:0004424 imidazoleglycerol-phosphate dehydratase activity(GO:0004424)
0.1 0.7 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 0.2 GO:0019902 phosphatase binding(GO:0019902)
0.1 0.3 GO:0032977 membrane insertase activity(GO:0032977)
0.1 0.8 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.1 1.4 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.1 1.1 GO:0019210 kinase inhibitor activity(GO:0019210)
0.1 0.3 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.1 1.2 GO:0003951 NAD+ kinase activity(GO:0003951)
0.1 5.3 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.1 0.5 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 1.8 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.1 0.4 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.1 0.2 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.1 3.8 GO:0042393 histone binding(GO:0042393)
0.1 1.9 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.1 0.5 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.1 0.3 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.1 0.4 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 0.4 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.1 0.5 GO:0003746 translation elongation factor activity(GO:0003746)
0.1 0.4 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.1 0.2 GO:0008936 nicotinamidase activity(GO:0008936)
0.1 2.9 GO:0003678 DNA helicase activity(GO:0003678)
0.1 0.6 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 2.8 GO:0016279 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.1 1.5 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.1 1.5 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.1 4.2 GO:0016859 cis-trans isomerase activity(GO:0016859)
0.1 10.4 GO:0015631 tubulin binding(GO:0015631)
0.1 15.2 GO:0005509 calcium ion binding(GO:0005509)
0.1 0.7 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.1 0.5 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.1 0.6 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 0.7 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.1 0.3 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.1 0.8 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 0.6 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 0.1 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.1 0.8 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.3 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.1 1.8 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.1 0.4 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 0.6 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.1 0.6 GO:0035198 miRNA binding(GO:0035198)
0.1 0.3 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.1 0.4 GO:0017070 U6 snRNA binding(GO:0017070)
0.1 0.2 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.1 3.2 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.1 0.2 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.1 0.9 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 2.8 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.1 0.2 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.1 0.4 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.1 0.3 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.1 8.9 GO:0043492 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances(GO:0016820) ATPase activity, coupled to transmembrane movement of substances(GO:0042626) ATPase activity, coupled to movement of substances(GO:0043492)
0.1 0.4 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.1 1.5 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.1 0.9 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.1 0.3 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.1 0.9 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.1 35.8 GO:0003729 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.1 2.5 GO:0030145 manganese ion binding(GO:0030145)
0.1 0.7 GO:0031491 nucleosome binding(GO:0031491)
0.1 0.6 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.1 1.0 GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives(GO:0016857)
0.1 1.9 GO:0016876 aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876)
0.1 0.3 GO:0004096 catalase activity(GO:0004096)
0.0 0.2 GO:0004779 sulfate adenylyltransferase activity(GO:0004779)
0.0 0.5 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 1.5 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 20.6 GO:0008270 zinc ion binding(GO:0008270)
0.0 0.8 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.0 2.2 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 1.3 GO:0019001 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.4 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 17.0 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 0.6 GO:0015175 neutral amino acid transmembrane transporter activity(GO:0015175)
0.0 0.4 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.2 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.3 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910) ligase activity, forming phosphoric ester bonds(GO:0016886)
0.0 0.3 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.1 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.0 1.5 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.2 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 4.1 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 1.3 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.3 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.5 GO:0004743 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.3 GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor(GO:0016731)
0.0 0.3 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.0 GO:0052659 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.0 0.4 GO:0043022 ribosome binding(GO:0043022)
0.0 0.1 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.0 1.2 GO:0004620 phospholipase activity(GO:0004620)
0.0 0.5 GO:0030276 clathrin binding(GO:0030276)
0.0 1.3 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.3 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.9 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.0 0.5 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 7.6 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 0.3 GO:0008237 metallopeptidase activity(GO:0008237)
0.0 0.3 GO:0052381 tRNA dimethylallyltransferase activity(GO:0052381)
0.0 0.6 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 8.7 GO:0004672 protein kinase activity(GO:0004672)
0.0 0.1 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.0 32.9 GO:0003700 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0 0.3 GO:0051540 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 0.2 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.0 0.4 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 1.3 GO:0004180 carboxypeptidase activity(GO:0004180)
0.0 0.3 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084)
0.0 0.3 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.9 GO:0008047 enzyme activator activity(GO:0008047)
0.0 0.8 GO:0017137 Rab GTPase binding(GO:0017137)
0.0 0.3 GO:0031418 L-ascorbic acid binding(GO:0031418)
0.0 1.0 GO:0016879 ligase activity, forming carbon-nitrogen bonds(GO:0016879)
0.0 0.2 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.1 GO:0004333 fumarate hydratase activity(GO:0004333)
0.0 0.1 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 0.9 GO:0003682 chromatin binding(GO:0003682)
0.0 0.4 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.1 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.0 0.6 GO:0003779 actin binding(GO:0003779)
0.0 0.8 GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides(GO:0016811)
0.0 0.1 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 0.1 GO:0034212 peptide N-acetyltransferase activity(GO:0034212)
0.0 0.0 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.0 0.1 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.5 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.0 0.1 GO:0008276 protein methyltransferase activity(GO:0008276)
0.0 3.2 GO:0003723 RNA binding(GO:0003723)
0.0 0.1 GO:0043021 ribonucleoprotein complex binding(GO:0043021)
0.0 0.1 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 1.4 GO:0003924 GTPase activity(GO:0003924)
0.0 0.1 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.1 GO:0008417 fucosyltransferase activity(GO:0008417)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.1 SIG CHEMOTAXIS Genes related to chemotaxis
0.6 1.8 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.6 0.6 ST GRANULE CELL SURVIVAL PATHWAY Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway.
0.4 0.8 PID INTEGRIN3 PATHWAY Beta3 integrin cell surface interactions
0.4 3.3 NABA CORE MATRISOME Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans
0.4 1.9 PID S1P META PATHWAY Sphingosine 1-phosphate (S1P) pathway
0.3 0.9 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.3 1.6 ST B CELL ANTIGEN RECEPTOR B Cell Antigen Receptor
0.2 1.2 PID AP1 PATHWAY AP-1 transcription factor network
0.2 0.7 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network
0.2 0.4 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.2 0.8 PID SHP2 PATHWAY SHP2 signaling
0.2 1.5 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 1.0 PID NOTCH PATHWAY Notch signaling pathway
0.1 0.4 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.1 0.7 PID BARD1 PATHWAY BARD1 signaling events
0.1 0.4 PID ATM PATHWAY ATM pathway
0.1 0.6 PID ATR PATHWAY ATR signaling pathway
0.1 0.3 SA G1 AND S PHASES Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition.
0.1 0.7 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.1 0.3 PID PLK1 PATHWAY PLK1 signaling events
0.0 0.3 PID CMYB PATHWAY C-MYB transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.2 6.7 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.8 3.4 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.7 2.0 REACTOME APOPTOTIC EXECUTION PHASE Genes involved in Apoptotic execution phase
0.6 1.8 REACTOME POTASSIUM CHANNELS Genes involved in Potassium Channels
0.5 1.4 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.4 0.8 REACTOME DOWNSTREAM SIGNALING OF ACTIVATED FGFR Genes involved in Downstream signaling of activated FGFR
0.3 0.9 REACTOME TCR SIGNALING Genes involved in TCR signaling
0.3 2.7 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.3 1.2 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.3 0.9 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.2 0.7 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.2 0.7 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.2 1.6 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.2 0.9 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.2 1.7 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.2 0.5 REACTOME SPHINGOLIPID METABOLISM Genes involved in Sphingolipid metabolism
0.2 0.7 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.2 0.5 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.2 0.8 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.1 0.7 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.1 0.6 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.1 3.2 REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex
0.1 0.9 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.1 0.4 REACTOME SIGNALING BY FGFR IN DISEASE Genes involved in Signaling by FGFR in disease
0.1 0.4 REACTOME HIV LIFE CYCLE Genes involved in HIV Life Cycle
0.1 0.2 REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION Genes involved in NOTCH1 Intracellular Domain Regulates Transcription
0.1 0.6 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.1 1.1 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 1.9 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.0 0.1 REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER Genes involved in Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer
0.0 0.2 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.0 0.1 REACTOME HOST INTERACTIONS OF HIV FACTORS Genes involved in Host Interactions of HIV factors
0.0 0.2 REACTOME PROTEIN FOLDING Genes involved in Protein folding