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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G42430

Z-value: 1.09

Transcription factors associated with AT2G42430

Gene Symbol Gene ID Gene Info
AT2G42430
AT2G42430 lateral organ boundaries-domain 16

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
LBD16arTal_v1_Chr2_+_17663353_17663353-0.029.5e-01Click!

Activity profile of AT2G42430 motif

Sorted Z-values of AT2G42430 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_+_23187840 2.57 AT5G57220.1
CYP81F2
cytochrome P450, family 81, subfamily F, polypeptide 2
Chr4_+_12686459 2.23 AT4G24570.1
DIC2
dicarboxylate carrier 2
Chr3_-_2130451 1.95 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr1_+_15081952 1.73 AT1G40104.1
AT1G40104
hypothetical protein
Chr5_-_25661007 1.55 AT5G64120.1
AT5G64120
Peroxidase superfamily protein
Chr4_+_13391293 1.53 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
Chr4_+_13390754 1.50 AT4G26530.3
FBA5
Aldolase superfamily protein
Chr2_+_15445294 1.46 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr2_+_3618058 1.35 AT2G08986.1
AT2G08986
hypothetical protein
Chr4_+_11155453 1.32 AT4G20830.1
AT4G20830.2
AT4G20830
FAD-binding Berberine family protein
Chr1_+_2927502 1.32 AT1G09070.1
SRC2
soybean gene regulated by cold-2
Chr4_+_10375244 1.32 AT4G18950.1
AT4G18950.2
AT4G18950
Integrin-linked protein kinase family
Chr2_+_9844134 1.30 AT2G23130.1
AT2G23130.2
AGP17
arabinogalactan protein 17
Chr5_-_26607012 1.24 AT5G66650.1
AT5G66650
calcium uniporter (DUF607)
Chr5_-_26906517 1.20 AT5G67420.1
AT5G67420.2
LBD37
LOB domain-containing protein 37
Chr4_-_11896480 1.19 AT4G22590.1
TPPG
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_22358381 1.16 AT5G55090.1
AT5G55090.2
MAPKKK15
mitogen-activated protein kinase kinase kinase 15
Chr2_+_11809279 1.16 AT2G27690.1
CYP94C1
cytochrome P450, family 94, subfamily C, polypeptide 1
Chr2_+_7209108 1.11 AT2G16630.1
AT2G16630
Pollen Ole e 1 allergen and extensin family protein
Chr5_+_4218786 1.09 AT5G13220.5
AT5G13220.1
AT5G13220.3
AT5G13220.2
AT5G13220.6
AT5G13220.7
AT5G13220.4
JAZ10
jasmonate-zim-domain protein 10
Chr5_-_16974877 1.08 AT5G42440.1
AT5G42440
Protein kinase superfamily protein
Chr3_-_18767529 1.01 AT3G50570.1
AT3G50570.2
AT3G50570
hydroxyproline-rich glycoprotein family protein
Chr1_-_13456336 1.00 AT1G36060.1
AT1G36060
Integrase-type DNA-binding superfamily protein
Chr1_+_4084162 0.99 AT1G12080.1
AT1G12080.2
AT1G12080
Vacuolar calcium-binding protein-like protein
Chr1_+_852151 0.98 AT1G03440.1
AT1G03440
Leucine-rich repeat (LRR) family protein
Chr1_-_1547798 0.97 AT1G05300.2
AT1G05300.1
ZIP5
zinc transporter 5 precursor
Chr1_-_2152541 0.97 AT1G07000.1
EXO70B2
exocyst subunit exo70 family protein B2
Chr1_+_4433605 0.96 AT1G12990.1
AT1G12990
beta-1,4-N-acetylglucosaminyltransferase family protein
Chr2_-_10737800 0.95 AT2G25200.1
AT2G25200
hypothetical protein (DUF868)
Chr5_+_5078200 0.95 AT5G15600.1
AT5G15600.2
SP1L4
SPIRAL1-like4
Chr5_+_1629610 0.91 AT5G05500.1
MOP10
Pollen Ole e 1 allergen and extensin family protein
Chr4_-_3950602 0.90 AT4G06700.1
AT4G06700

Chr3_-_22933362 0.88 AT3G61920.1
AT3G61920
UvrABC system protein C
Chr1_+_26464226 0.84 AT1G70270.2
AT1G70270.1
AT1G70270
transcription factor
Chr3_-_3357754 0.83 AT3G10720.2
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_-_12889931 0.83 AT2G30210.1
LAC3
laccase 3
Chr2_+_13916440 0.81 AT2G32800.1
AP4.3A
protein kinase family protein
Chr1_+_19640525 0.79 AT1G52720.1
AT1G52720
hypothetical protein
Chr1_+_30370474 0.78 AT1G80820.1
AT1G80820.2
CCR2
cinnamoyl coa reductase
Chr2_-_12188293 0.78 AT2G28500.1
LBD11
LOB domain-containing protein 11
Chr3_-_21780663 0.78 AT3G58930.5
AT3G58930.1
AT3G58930.3
AT3G58930.4
AT3G58930
F-box/RNI-like superfamily protein
Chr1_+_11212958 0.78 AT1G31320.1
LBD4
LOB domain-containing protein 4
Chr1_+_3053698 0.77 AT1G09460.1
AT1G09460
Carbohydrate-binding X8 domain superfamily protein
Chr4_+_15490566 0.76 AT4G32030.1
AT4G32030
hypothetical protein
Chr1_-_5139467 0.75 AT1G14900.1
HMGA
high mobility group A
Chr4_+_15490740 0.75 AT4G32030.2
AT4G32030
hypothetical protein
Chr3_-_18666691 0.75 AT3G50340.1
AT3G50340
hypothetical protein
Chr4_-_17550257 0.75 AT4G37290.1
AT4G37290
transmembrane protein
Chr4_+_12291632 0.72 AT4G23550.1
WRKY29
WRKY family transcription factor
Chr3_+_21680027 0.71 AT3G58620.1
AT3G58620.2
TTL4
tetratricopetide-repeat thioredoxin-like 4
Chr3_-_22256177 0.70 AT3G60220.1
ATL4
TOXICOS EN LEVADURA 4
Chr5_-_14739256 0.69 AT5G37240.2
AT5G37240.3
AT5G37240.1
AT5G37240
hypothetical protein
Chr2_+_17495506 0.68 AT2G41905.1
AT2G41905
transmembrane protein
Chr5_+_8031165 0.68 AT5G23820.1
AT5G23820
MD-2-related lipid recognition domain-containing protein
Chr4_+_10254359 0.68 AT4G18620.1
PYL13
PYR1-like 13
Chr1_+_10892445 0.67 AT1G30700.1
AT1G30700
FAD-binding Berberine family protein
Chr2_-_11777529 0.67 AT2G27580.2
AT2G27580.1
AT2G27580
A20/AN1-like zinc finger family protein
Chr3_-_3356811 0.66 AT3G10720.1
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_+_27394598 0.66 AT1G72790.1
AT1G72790
hydroxyproline-rich glycoprotein family protein
Chr1_+_26141726 0.63 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
Chr1_-_1257893 0.63 AT1G04580.1
AO4
aldehyde oxidase 4
Chr3_+_5121303 0.63 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
Chr1_-_2091686 0.62 AT1G06800.1
AT1G06800.2
PLA-I%7Bgamma%7D1
alpha/beta-Hydrolases superfamily protein
Chr3_-_17146867 0.62 AT3G46570.1
AT3G46570
Glycosyl hydrolase superfamily protein
Chr4_+_10841935 0.62 AT4G20010.1
AT4G20010.2
PTAC9
plastid transcriptionally active 9
Chr4_+_7962428 0.61 AT4G13710.1
AT4G13710.2
AT4G13710
Pectin lyase-like superfamily protein
Chr1_+_4864881 0.61 AT1G14240.2
AT1G14240.4
AT1G14240.1
AT1G14240.3
AT1G14240
GDA1/CD39 nucleoside phosphatase family protein
Chr5_-_14739490 0.61 AT5G37240.4
AT5G37240.5
AT5G37240
hypothetical protein
Chr3_-_21780433 0.60 AT3G58930.2
AT3G58930
F-box/RNI-like superfamily protein
Chr1_-_8016150 0.58 AT1G22650.2
AT1G22650.1
A/N-InvD
Plant neutral invertase family protein
Chr2_-_10697175 0.58 AT2G25130.1
AT2G25130
ARM repeat superfamily protein
Chr2_-_1364788 0.58 AT2G04090.1
AT2G04090
MATE efflux family protein
Chr2_-_3379885 0.58 AT2G07704.1
AT2G07704

Chr1_-_19978048 0.57 AT1G53520.1
FAP3
Chalcone-flavanone isomerase family protein
Chr4_-_12062757 0.57 AT4G23010.2
AT4G23010.1
AT4G23010.3
UTR2
UDP-galactose transporter 2
Chr5_+_575382 0.56 AT5G02560.2
HTA12
histone H2A 12
Chr1_-_5652883 0.56 AT1G16530.1
ASL9
ASYMMETRIC LEAVES 2-like 9
Chr5_+_575225 0.55 AT5G02560.1
HTA12
histone H2A 12
Chr1_-_2160818 0.55 AT1G07030.1
AT1G07030
Mitochondrial substrate carrier family protein
Chr1_-_1161982 0.54 AT1G04330.1
AT1G04330
hypothetical protein
Chr5_-_173663 0.54 AT5G01410.1
AT5G01410.2
RSR4
Aldolase-type TIM barrel family protein
Chr4_-_9985729 0.54 AT4G17990.2
AT4G17990.1
AT4G17990
hypothetical protein
Chr3_+_6180621 0.53 AT3G18050.1
AT3G18050
GPI-anchored protein
Chr3_+_21997052 0.53 AT3G59550.1
SYN3
Rad21/Rec8-like family protein
Chr5_+_19392166 0.52 AT5G47900.8
AT5G47900.9
AT5G47900.1
AT5G47900.10
AT5G47900.3
AT5G47900.2
AT5G47900.5
AT5G47900.7
AT5G47900.4
AT5G47900.6
AT5G47900
heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624)
Chr1_-_2282828 0.51 AT1G07430.1
HAI2
highly ABA-induced PP2C protein 2
Chr1_+_24690444 0.51 AT1G66245.1
AT1G66245
hypothetical protein
Chr1_+_898480 0.50 AT1G03600.1
PSB27
photosystem II family protein
Chr5_-_26246960 0.50 AT5G65660.1
AT5G65660
hydroxyproline-rich glycoprotein family protein
Chr3_+_5592491 0.50 AT3G16460.1
JAL34
Mannose-binding lectin superfamily protein
Chr3_+_5592644 0.50 AT3G16460.2
JAL34
Mannose-binding lectin superfamily protein
Chr1_-_19288385 0.49 AT1G51910.1
AT1G51910
Leucine-rich repeat protein kinase family protein
Chr2_+_17878944 0.49 AT2G42990.1
AT2G42990
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_+_18220086 0.48 AT2G44030.1
AT2G44030
Galactose oxidase/kelch repeat superfamily protein
Chr4_-_11441903 0.48 AT4G21500.1
AT4G21500
transmembrane protein
Chr1_+_17090807 0.48 AT1G45165.1
AT1G45165
Expressed protein
Chr5_+_26017403 0.47 AT5G65130.1
AT5G65130
Integrase-type DNA-binding superfamily protein
Chr5_-_22581335 0.47 AT5G55790.3
AT5G55790.2
AT5G55790.1
AT5G55790
hypothetical protein
Chr4_+_8495120 0.47 AT4G14785.1
SCRL23
SCR-like 23
Chr5_+_26017185 0.47 AT5G65130.2
AT5G65130
Integrase-type DNA-binding superfamily protein
Chr5_+_14694503 0.47 AT5G37145.1
AT5G37145

Chr2_-_12942409 0.46 AT2G30370.1
CHAL
allergen-like protein
Chr2_-_1555514 0.46 AT2G04480.1
AT2G04480
hypothetical protein
Chr5_-_2387249 0.45 AT5G07540.1
AT5G07540.2
GRP16
glycine-rich protein 16
Chr1_+_1206760 0.45 AT1G04445.2
AT1G04445
C2H2-like zinc finger protein
Chr4_-_1422828 0.45 AT4G03230.8
AT4G03230
G-type lectin S-receptor-like Serine/Threonine-kinase
Chr4_-_1422594 0.45 AT4G03230.7
AT4G03230
G-type lectin S-receptor-like Serine/Threonine-kinase
Chr2_+_10914511 0.45 AT2G25650.1
AT2G25650
DNA-binding storekeeper protein-related transcriptional regulator
Chr3_-_6396624 0.44 AT3G18570.1
AT3G18570
Oleosin family protein
Chr2_-_15066001 0.44 AT2G35880.2
AT2G35880.1
AT2G35880.3
AT2G35880
TPX2 (targeting protein for Xklp2) protein family
Chr5_-_19603883 0.44 AT5G48375.1
TGG3
thioglucoside glucosidase 3
Chr1_-_6653195 0.43 AT1G19250.1
FMO1
flavin-dependent monooxygenase 1
Chr1_+_25562118 0.43 AT1G68200.6
AT1G68200
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr2_+_9132557 0.43 AT2G21340.2
AT2G21340
MATE efflux family protein
Chr1_+_25561638 0.43 AT1G68200.1
AT1G68200.3
AT1G68200.2
AT1G68200.4
AT1G68200.5
AT1G68200
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr4_+_18324457 0.42 AT4G39400.1
BRI1
Leucine-rich receptor-like protein kinase family protein
Chr3_+_380350 0.42 AT3G02130.1
AT3G02130.2
RPK2
receptor-like protein kinase 2
Chr2_+_9132381 0.41 AT2G21340.1
AT2G21340
MATE efflux family protein
Chr1_-_4265156 0.41 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
Chr1_+_7963813 0.41 AT1G22540.1
AT1G22540
Major facilitator superfamily protein
Chr1_-_16767685 0.41 AT1G44100.1
AAP5
amino acid permease 5
Chr1_+_19910516 0.40 AT1G53370.2
AT1G53370.1
AT1G53370
F-box and associated interaction domains-containing protein
Chr3_-_538126 0.40 AT3G02550.1
LBD41
LOB domain-containing protein 41
Chr5_-_6066284 0.39 AT5G18320.1
AT5G18320
ARM repeat superfamily protein
Chr5_-_24145355 0.39 AT5G59960.2
AT5G59960.3
AT5G59960.1
AT5G59960
K-stimulated pyrophosphate-energized sodium pump protein
Chr1_+_1207344 0.39 AT1G04445.1
AT1G04445
C2H2-like zinc finger protein
Chr3_+_22877168 0.39 AT3G61810.1
AT3G61810
Glycosyl hydrolase family 17 protein
Chr1_-_16821823 0.39 AT1G44224.1
AT1G44224
ECA1 gametogenesis related family protein
Chr1_-_22507947 0.38 AT1G61097.1
AT1G61097
Expressed protein
Chr2_+_12272281 0.38 AT2G28625.1
AT2G28625
hypothetical protein
Chr4_+_2229649 0.38 AT4G04480.1
AT4G04480
F-box protein with a domain protein
Chr5_-_1214439 0.38 AT5G04330.1
CYP84A4
Cytochrome P450 superfamily protein
Chr1_+_11156698 0.37 AT1G31220.1
AT1G31220
Formyl transferase
Chr1_-_27853233 0.37 AT1G74070.2
AT1G74070.1
AT1G74070
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr4_-_2778839 0.37 AT4G05497.1
AT4G05497
RNI-like superfamily protein
Chr4_-_13967076 0.37 AT4G28100.1
AT4G28100
transmembrane protein
Chr1_-_1452872 0.36 AT1G05060.1
AT1G05060
coiled-coil protein
Chr4_+_8922389 0.35 AT4G15650.1
AT4G15650
kinase-like protein
Chr5_+_5957080 0.35 AT5G17990.1
TRP1
tryptophan biosynthesis 1
Chr5_+_17062455 0.35 AT5G42610.1
AT5G42610
calcium uniporter (DUF607)
Chr4_+_11672349 0.35 AT4G22030.1
AT4G22030
F-box protein with a domain protein
Chr4_+_8327626 0.35 AT4G14470.1
AT4G14470

Chr2_-_12942829 0.35 AT2G30370.2
AT2G30370.3
CHAL
allergen-like protein
Chr3_+_18331509 0.34 AT3G49430.6
AT3G49430.1
AT3G49430.4
AT3G49430.5
AT3G49430.3
AT3G49430.2
AT3G49430.7
SR34a
SER/ARG-rich protein 34A
Chr1_-_16913664 0.33 AT1G44790.1
AT1G44790
ChaC-like family protein
Chr2_-_8348431 0.33 AT2G19230.1
AT2G19230.2
AT2G19230
Leucine-rich repeat transmembrane protein kinase protein
Chr3_+_8536850 0.33 AT3G23715.1
SCRL13
SCR-like 13
Chr5_+_1594685 0.33 AT5G05390.1
LAC12
laccase 12
Chr1_+_25706882 0.32 AT1G68510.1
LBD42
LOB domain-containing protein 42
Chr4_-_13152279 0.32 AT4G25870.1
AT4G25870
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr3_-_7618671 0.32 AT3G21630.1
CERK1
chitin elicitor receptor kinase 1
Chr3_+_13581147 0.32 AT3G33055.1
AT3G33055

Chr2_-_14884283 0.31 AT2G35350.1
PLL1
poltergeist like 1
Chr1_+_24113109 0.31 AT1G64900.1
CYP89A2
cytochrome P450, family 89, subfamily A, polypeptide 2
Chr3_+_22197529 0.31 AT3G60110.1
AT3G60110
DNA-binding bromodomain-containing protein
Chr5_+_18388949 0.31 AT5G45370.6
UMAMIT1
nodulin MtN21 /EamA-like transporter family protein
Chr3_+_18864775 0.30 AT3G50755.1
AT3G50755

Chr5_-_4952777 0.30 AT5G15250.1
AT5G15250.2
FTSH6
FTSH protease 6
Chr3_-_3955550 0.30 AT3G12460.1
AT3G12460
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr1_-_29979337 0.30 AT1G79670.2
AT1G79670.1
RFO1
Wall-associated kinase family protein
Chr1_-_18590799 0.30 AT1G50190.1
AT1G50190
Cysteine/Histidine-rich C1 domain family protein
Chr2_-_19294375 0.29 AT2G46960.2
AT2G46960.1
CYP709B1
cytochrome P450, family 709, subfamily B, polypeptide 1
Chr5_+_18388291 0.29 AT5G45370.3
AT5G45370.1
AT5G45370.5
UMAMIT1
nodulin MtN21 /EamA-like transporter family protein
Chr3_+_9496102 0.29 AT3G25950.1
AT3G25950
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Chr4_+_11405812 0.29 AT4G21420.1
AT4G21420

Chr4_-_3958339 0.29 AT4G06702.1
AT4G06702

Chr3_-_574626 0.28 AT3G02670.1
AT3G02670.2
AT3G02670
Glycine-rich protein family
Chr1_-_9887478 0.28 AT1G28280.2
AT1G28280.1
AT1G28280
VQ motif-containing protein
Chr1_+_10861675 0.28 AT1G30640.3
AT1G30640
Protein kinase family protein
Chr5_-_26108726 0.28 AT5G65320.1
AT5G65320.2
AT5G65320
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_-_1423064 0.28 AT4G03230.3
AT4G03230.2
AT4G03230.4
AT4G03230.5
AT4G03230.1
AT4G03230.6
AT4G03230
G-type lectin S-receptor-like Serine/Threonine-kinase
Chr1_+_5448611 0.28 AT1G15830.1
AT1G15830.3
AT1G15830
hypothetical protein
Chr1_-_22057268 0.27 AT1G59910.1
AT1G59910
Actin-binding FH2 (formin homology 2) family protein
Chr1_+_3554104 0.27 AT1G10700.2
AT1G10700.1
PRS3
phosphoribosyl pyrophosphate (PRPP) synthase 3
Chr3_-_21183144 0.27 AT3G57240.1
BG3
beta-1,3-glucanase 3
Chr4_+_17104542 0.27 AT4G36150.1
AT4G36150
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_+_3252317 0.27 AT1G09970.2
LRR XI-23
Leucine-rich receptor-like protein kinase family protein
Chr5_+_21738849 0.26 AT5G53510.1
OPT9
oligopeptide transporter 9
Chr1_+_10860619 0.26 AT1G30640.1
AT1G30640.2
AT1G30640
Protein kinase family protein
Chr5_-_6271325 0.26 AT5G18810.1
AT5G18810.2
SCL28
SC35-like splicing factor 28
Chr1_+_3252098 0.26 AT1G09970.1
LRR XI-23
Leucine-rich receptor-like protein kinase family protein
Chr5_+_4608745 0.26 AT5G14280.1
AT5G14280
DNA-binding storekeeper-like protein
Chr1_-_20017332 0.25 AT1G53630.1
AT1G53630

Chr2_-_12475236 0.25 AT2G29040.1
AT2G29040
Exostosin family protein
Chr1_-_3272110 0.25 AT1G10020.1
AT1G10020
formin-like protein (DUF1005)
Chr5_-_4875949 0.25 AT5G15060.1
AT5G15060
Lateral organ boundaries (LOB) domain family protein
Chr5_-_3643010 0.25 AT5G11416.1
AT5G11416
hypothetical protein
Chr3_-_22520275 0.25 AT3G60935.1
AT3G60935

Chr4_-_15111599 0.24 AT4G31030.1
AT4G31030
Putative membrane lipoprotein
Chr3_-_4353396 0.24 AT3G13390.1
sks11
SKU5 similar 11
Chr1_+_5448060 0.23 AT1G15830.2
AT1G15830
hypothetical protein
Chr2_+_15934244 0.23 AT2G38080.1
IRX12
Laccase/Diphenol oxidase family protein
Chr5_-_12251643 0.23 AT5G32600.1
AT5G32600

Chr1_+_2073701 0.23 AT1G06750.2
AT1G06750.3
AT1G06750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_+_24430830 0.23 AT5G60750.1
AT5G60750
CAAX amino terminal protease family protein
Chr5_-_8593601 0.23 AT5G24940.1
AT5G24940
Protein phosphatase 2C family protein
Chr5_+_18387091 0.22 AT5G45370.4
AT5G45370.2
UMAMIT1
nodulin MtN21 /EamA-like transporter family protein
Chr2_-_11868195 0.22 AT2G27870.1
AT2G27870

Chr1_+_5389952 0.22 AT1G15670.1
AT1G15670
Galactose oxidase/kelch repeat superfamily protein
Chr2_+_8241104 0.22 AT2G19000.1
AT2G19000
hypothetical protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G42430

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.2 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.5 1.5 GO:0015840 urea transport(GO:0015840)
0.4 2.6 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.4 1.2 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.3 0.8 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.2 0.8 GO:0019427 acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.2 0.5 GO:0033194 response to hydroperoxide(GO:0033194)
0.2 3.0 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.1 0.4 GO:0009945 radial axis specification(GO:0009945)
0.1 0.4 GO:0015802 basic amino acid transport(GO:0015802)
0.1 0.5 GO:0097438 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438) negative regulation of seed maturation(GO:2000692)
0.1 0.3 GO:0032490 detection of molecule of bacterial origin(GO:0032490) detection of molecule of fungal origin(GO:0032491)
0.1 0.4 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.6 GO:0051096 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.1 1.0 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.1 0.6 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.1 0.8 GO:0016584 nucleosome positioning(GO:0016584) negative regulation of chromatin silencing(GO:0031936)
0.1 0.3 GO:0006015 5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.1 0.4 GO:0070509 calcium ion import(GO:0070509)
0.1 1.1 GO:0070828 heterochromatin organization(GO:0070828)
0.1 0.8 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.1 0.5 GO:0070193 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.0 0.6 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 0.3 GO:0006751 glutathione catabolic process(GO:0006751)
0.0 1.1 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.0 0.5 GO:0010206 photosystem II repair(GO:0010206)
0.0 0.6 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.1 GO:0006747 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.0 0.3 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.0 0.7 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.2 GO:0045604 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.0 0.3 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.2 GO:0048480 style development(GO:0048479) stigma development(GO:0048480)
0.0 1.0 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 1.2 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.6 GO:0006949 syncytium formation(GO:0006949)
0.0 0.9 GO:0019915 lipid storage(GO:0019915)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.4 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.4 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.2 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.0 1.0 GO:0006487 protein N-linked glycosylation(GO:0006487)
0.0 0.2 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.2 GO:0046349 UDP-N-acetylglucosamine metabolic process(GO:0006047) UDP-N-acetylglucosamine biosynthetic process(GO:0006048) amino sugar biosynthetic process(GO:0046349)
0.0 1.2 GO:0048544 recognition of pollen(GO:0048544)
0.0 0.2 GO:0016554 cytidine to uridine editing(GO:0016554)
0.0 0.4 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.0 1.4 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.2 GO:0048564 photosystem I assembly(GO:0048564)
0.0 0.2 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.0 0.8 GO:0043484 regulation of RNA splicing(GO:0043484)
0.0 0.1 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.0 0.1 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 0.3 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.0 0.5 GO:0072665 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.0 0.4 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.6 GO:0042542 response to hydrogen peroxide(GO:0042542)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.8 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.6 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.1 0.4 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.1 0.3 GO:0002189 ribose phosphate diphosphokinase complex(GO:0002189)
0.1 1.0 GO:0043230 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.1 0.5 GO:0034991 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.1 0.9 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.1 1.1 GO:0000792 heterochromatin(GO:0000792)
0.1 0.8 GO:0000786 nucleosome(GO:0000786)
0.0 0.9 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 0.3 GO:1902562 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.4 GO:0031965 nuclear membrane(GO:0031965)
0.0 0.6 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.2 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 3.7 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.2 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.2 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.5 1.5 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.2 3.0 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.2 0.5 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.2 1.2 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.2 0.8 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.2 0.8 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 1.0 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 0.4 GO:0015292 uniporter activity(GO:0015292)
0.1 0.8 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.6 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.1 0.6 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.1 0.3 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.1 0.4 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.1 0.3 GO:0070405 ammonium ion binding(GO:0070405)
0.1 0.5 GO:0001653 peptide receptor activity(GO:0001653)
0.1 1.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.4 GO:0019137 thioglucosidase activity(GO:0019137)
0.0 0.6 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 1.2 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.6 GO:0016872 intramolecular lyase activity(GO:0016872)
0.0 0.1 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.1 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.0 0.7 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 1.0 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.3 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.4 GO:0031543 peptidyl-proline dioxygenase activity(GO:0031543)
0.0 0.2 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.0 0.2 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.0 0.4 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.0 0.4 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.0 0.6 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.3 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 1.5 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.3 GO:0016755 transferase activity, transferring amino-acyl groups(GO:0016755)
0.0 0.2 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 0.1 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.4 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.2 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.2 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.4 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.2 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.9 GO:0043621 protein self-association(GO:0043621)
0.0 0.3 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.0 GO:0032131 alkylated DNA binding(GO:0032131)
0.0 0.3 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 1.4 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.1 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.0 0.2 GO:0008536 Ran GTPase binding(GO:0008536)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.1 0.8 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.1 0.4 REACTOME BIOLOGICAL OXIDATIONS Genes involved in Biological oxidations
0.0 0.2 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production