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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G40740

Z-value: 1.70

Transcription factors associated with AT2G40740

Gene Symbol Gene ID Gene Info
AT2G40740
AT2G40740 WRKY DNA-binding protein 55

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
WRKY55arTal_v1_Chr2_+_16997078_169971770.451.1e-01Click!

Activity profile of AT2G40740 motif

Sorted Z-values of AT2G40740 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_14827211 2.52 AT4G30280.1
XTH18
xyloglucan endotransglucosylase/hydrolase 18
Chr1_-_7396773 2.42 AT1G21120.1
AT1G21120.2
IGMT2
O-methyltransferase family protein
Chr1_-_8075037 2.41 AT1G22810.1
AT1G22810
Integrase-type DNA-binding superfamily protein
Chr5_+_19434758 2.41 AT5G47990.1
CYP705A5
cytochrome P450, family 705, subfamily A, polypeptide 5
Chr4_+_6826587 2.39 AT4G11190.1
AT4G11190
Disease resistance-responsive (dirigent-like protein) family protein
Chr4_-_12337599 2.38 AT4G23680.1
AT4G23680
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr1_-_27569823 2.29 AT1G73330.1
DR4
drought-repressed 4
Chr1_-_4975705 2.22 AT1G14540.1
PER4
Peroxidase superfamily protein
Chr3_-_11194897 2.16 AT3G29250.2
AT3G29250.1
SDR4
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_6833564 2.15 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
Chr2_-_10454591 1.95 AT2G24600.2
AT2G24600.3
AT2G24600.4
AT2G24600.1
AT2G24600
Ankyrin repeat family protein
Chr5_-_14566439 1.89 AT5G36925.1
AT5G36925
hypothetical protein
Chr5_-_19036938 1.88 AT5G46890.1
AT5G46890
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_15849108 1.82 AT5G39580.2
AT5G39580.1
AT5G39580
Peroxidase superfamily protein
Chr3_-_197564 1.81 AT3G01500.4
CA1
carbonic anhydrase 1
Chr3_-_197974 1.80 AT3G01500.1
CA1
carbonic anhydrase 1
Chr4_-_12143833 1.79 AT4G23190.1
AT4G23190.2
AT4G23190.3
CRK11
cysteine-rich RLK (RECEPTOR-like protein kinase) 11
Chr3_-_198160 1.79 AT3G01500.2
CA1
carbonic anhydrase 1
Chr1_-_7388512 1.79 AT1G21100.1
IGMT1
O-methyltransferase family protein
Chr3_-_198664 1.78 AT3G01500.3
CA1
carbonic anhydrase 1
Chr1_+_29135904 1.76 AT1G77530.1
AT1G77530.2
AT1G77530
O-methyltransferase family protein
Chr2_+_8097420 1.75 AT2G18690.2
AT2G18690.1
AT2G18690
transmembrane protein
Chr5_+_21603569 1.75 AT5G53250.1
AGP22
arabinogalactan protein 22
Chr4_+_11929359 1.73 AT4G22690.1
CYP706A1
cytochrome P450, family 706, subfamily A, polypeptide 1
Chr3_-_17008528 1.73 AT3G46280.1
AT3G46280
kinase-like protein
Chr4_-_9754161 1.73 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
Chr3_-_11195171 1.70 AT3G29250.3
SDR4
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_9128568 1.69 AT1G26380.1
AT1G26380
FAD-binding Berberine family protein
Chr5_-_19040456 1.68 AT5G46900.1
AT5G46900
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_29130375 1.67 AT1G77520.1
AT1G77520
O-methyltransferase family protein
Chr4_+_9051871 1.65 AT4G15975.1
AT4G15975
RING/U-box superfamily protein
Chr1_+_6568002 1.64 AT1G19020.1
AT1G19020
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Chr5_+_25033471 1.63 AT5G62340.1
AT5G62340
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_6697874 1.56 AT1G19380.1
AT1G19380
sugar, putative (DUF1195)
Chr4_+_12686459 1.54 AT4G24570.1
DIC2
dicarboxylate carrier 2
Chr1_-_21443036 1.53 AT1G57990.1
PUP18
purine permease 18
Chr5_-_17962276 1.53 AT5G44568.1
AT5G44568
transmembrane protein
Chr5_+_9050660 1.51 AT5G25930.1
AT5G25930
kinase family with leucine-rich repeat domain-containing protein
Chr3_-_8290164 1.51 AT3G23230.1
TDR1
Integrase-type DNA-binding superfamily protein
Chr2_+_12709721 1.51 AT2G29750.1
UGT71C1
UDP-glucosyl transferase 71C1
Chr4_+_12137995 1.50 AT4G23180.1
AT4G23180.3
AT4G23180.2
CRK10
cysteine-rich RLK (RECEPTOR-like protein kinase) 10
Chr4_-_12393982 1.49 AT4G23810.1
WRKY53
WRKY family transcription factor
Chr3_+_7770899 1.49 AT3G22060.1
AT3G22060
Receptor-like protein kinase-related family protein
Chr3_+_11005638 1.49 AT3G29000.1
AT3G29000
Calcium-binding EF-hand family protein
Chr5_+_4335595 1.48 AT5G13490.2
AAC2
ADP/ATP carrier 2
Chr4_-_17571743 1.44 AT4G37370.1
CYP81D8
cytochrome P450, family 81, subfamily D, polypeptide 8
Chr2_+_15706285 1.44 AT2G37430.1
ZAT11
C2H2 and C2HC zinc fingers superfamily protein
Chr5_+_4335272 1.43 AT5G13490.1
AAC2
ADP/ATP carrier 2
Chr1_+_30383561 1.42 AT1G80840.1
WRKY40
WRKY DNA-binding protein 40
Chr4_-_12143476 1.42 AT4G23190.4
CRK11
cysteine-rich RLK (RECEPTOR-like protein kinase) 11
Chr5_+_6470072 1.41 AT5G19240.1
AT5G19240
Glycoprotein membrane precursor GPI-anchored
Chr1_-_20967162 1.41 AT1G56060.2
AT1G56060.1
AT1G56060
cysteine-rich/transmembrane domain protein B
Chr5_-_8154710 1.39 AT5G24110.1
WRKY30
WRKY DNA-binding protein 30
Chr3_+_957112 1.39 AT3G03780.1
AT3G03780.3
MS2
methionine synthase 2
Chr2_+_19508929 1.39 AT2G47550.1
AT2G47550
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_-_16359943 1.36 AT2G39200.1
MLO12
Seven transmembrane MLO family protein
Chr1_-_10720843 1.36 AT1G30370.1
DLAH
alpha/beta-Hydrolases superfamily protein
Chr5_+_21383979 1.35 AT5G52750.2
AT5G52750.1
AT5G52750
Heavy metal transport/detoxification superfamily protein
Chr5_-_17166032 1.35 AT5G42800.1
DFR
dihydroflavonol 4-reductase
Chr5_-_23308680 1.34 AT5G57560.1
TCH4
Xyloglucan endotransglucosylase/hydrolase family protein
Chr3_+_956862 1.34 AT3G03780.2
MS2
methionine synthase 2
Chr4_-_17606924 1.33 AT4G37450.1
AT4G37450.2
AGP18
arabinogalactan protein 18
Chr4_+_11155453 1.33 AT4G20830.1
AT4G20830.2
AT4G20830
FAD-binding Berberine family protein
Chr1_-_20160864 1.33 AT1G54010.1
AT1G54010
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_8273903 1.33 AT4G14365.1
XBAT34
hypothetical protein
Chr1_+_6389399 1.32 AT1G18570.1
MYB51
myb domain protein 51
Chr5_+_9683988 1.32 AT5G27420.1
CNI1
carbon/nitrogen insensitive 1
Chr1_-_2199773 1.32 AT1G07160.1
AT1G07160
Protein phosphatase 2C family protein
Chr2_-_8851035 1.31 AT2G20562.1
AT2G20562
taximin
Chr4_+_4886962 1.29 AT4G08040.1
ACS11
1-aminocyclopropane-1-carboxylate synthase 11
Chr2_-_14541617 1.29 AT2G34500.1
CYP710A1
cytochrome P450, family 710, subfamily A, polypeptide 1
Chr5_-_3993767 1.29 AT5G12340.2
AT5G12340
DUF4228 domain protein
Chr5_-_8508957 1.28 AT5G24780.2
VSP1
vegetative storage protein 1
Chr3_+_7105371 1.28 AT3G20370.2
AT3G20370.1
AT3G20370
TRAF-like family protein
Chr3_-_18525792 1.28 AT3G49960.1
AT3G49960
Peroxidase superfamily protein
Chr2_-_16237280 1.28 AT2G38870.1
AT2G38870
Serine protease inhibitor, potato inhibitor I-type family protein
Chr5_+_15883179 1.27 AT5G39670.1
AT5G39670
Calcium-binding EF-hand family protein
Chr1_-_9649323 1.27 AT1G27730.1
STZ
salt tolerance zinc finger
Chr5_-_18371021 1.27 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr3_-_8450799 1.26 AT3G23550.1
AT3G23550
MATE efflux family protein
Chr3_+_3857780 1.26 AT3G12110.1
ACT11
actin-11
Chr5_-_19447149 1.26 AT5G48000.7
AT5G48000.4
AT5G48000.2
AT5G48000.3
AT5G48000.5
AT5G48000.6
CYP708A2
cytochrome P450, family 708, subfamily A, polypeptide 2
Chr1_-_20706893 1.25 AT1G55450.2
AT1G55450
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_17752079 1.25 AT4G37770.1
ACS8
1-amino-cyclopropane-1-carboxylate synthase 8
Chr2_-_18306395 1.24 AT2G44290.1
AT2G44290
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_20707071 1.24 AT1G55450.1
AT1G55450
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_8509201 1.23 AT5G24780.1
VSP1
vegetative storage protein 1
Chr1_+_17966383 1.23 AT1G48600.1
PMEAMT
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_+_9409160 1.23 AT3G25780.1
AOC3
allene oxide cyclase 3
Chr5_+_22652715 1.22 AT5G55930.1
OPT1
oligopeptide transporter 1
Chr4_-_8415605 1.21 AT4G14680.2
AT4G14680.1
APS3
Pseudouridine synthase/archaeosine transglycosylase-like family protein
Chr4_+_10838310 1.21 AT4G20000.1
AT4G20000
VQ motif-containing protein
Chr3_+_16789780 1.21 AT3G45730.1
AT3G45730
hypothetical protein
Chr1_+_5596633 1.20 AT1G16370.1
OCT6
organic cation/carnitine transporter 6
Chr4_-_17300367 1.19 AT4G36700.1
AT4G36700
RmlC-like cupins superfamily protein
Chr5_-_3993610 1.19 AT5G12340.1
AT5G12340
DUF4228 domain protein
Chr4_-_733510 1.18 AT4G01700.1
AT4G01700
Chitinase family protein
Chr4_-_8138392 1.18 AT4G14130.1
XTH15
xyloglucan endotransglucosylase/hydrolase 15
Chr1_+_17965871 1.18 AT1G48600.2
PMEAMT
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_15081952 1.17 AT1G40104.1
AT1G40104
hypothetical protein
Chr1_+_6832325 1.17 AT1G19770.1
PUP14
purine permease 14
Chr1_-_2190784 1.17 AT1G07135.1
AT1G07135
glycine-rich protein
Chr5_+_23003909 1.16 AT5G56870.1
BGAL4
beta-galactosidase 4
Chr4_+_6985517 1.16 AT4G11521.1
AT4G11521
Receptor-like protein kinase-related family protein
Chr3_+_17879542 1.15 AT3G48280.1
CYP71A25
cytochrome P450, family 71, subfamily A, polypeptide 25
Chr3_+_9480746 1.14 AT3G25900.1
AT3G25900.3
AT3G25900.2
HMT-1
Homocysteine S-methyltransferase family protein
Chr4_+_18519599 1.14 AT4G39940.1
AKN2
APS-kinase 2
Chr3_+_4376345 1.14 AT3G13437.2
AT3G13437.1
AT3G13437
transmembrane protein
Chr1_-_983544 1.14 AT1G03870.1
FLA9
FASCICLIN-like arabinoogalactan 9
Chr4_-_524249 1.13 AT4G01250.1
WRKY22
WRKY family transcription factor
Chr5_+_6467527 1.12 AT5G19230.1
AT5G19230
Glycoprotein membrane precursor GPI-anchored
Chr5_+_6467193 1.12 AT5G19230.2
AT5G19230
Glycoprotein membrane precursor GPI-anchored
Chr1_-_5864059 1.12 AT1G17147.1
AT1G17147
VQ motif-containing protein
Chr5_+_448092 1.11 AT5G02230.1
AT5G02230.3
AT5G02230.2
AT5G02230
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_22230500 1.11 AT5G54710.1
AT5G54710
Ankyrin repeat family protein
Chr2_-_12277417 1.11 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
Chr2_+_6313883 1.11 AT2G14750.1
APK
APS kinase
Chr5_-_22232949 1.10 AT5G54720.1
AT5G54720
Ankyrin repeat family protein
Chr5_-_3172701 1.10 AT5G10130.1
AT5G10130
Pollen Ole e 1 allergen and extensin family protein
Chr1_-_26295609 1.10 AT1G69840.6
AT1G69840.3
AT1G69840.2
AT1G69840.5
AT1G69840.7
AT1G69840.1
AT1G69840.4
AT1G69840
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr4_-_12006209 1.10 AT4G22880.2
AT4G22880.1
AT4G22880.3
LDOX
leucoanthocyanidin dioxygenase
Chr5_-_25661007 1.10 AT5G64120.1
AT5G64120
Peroxidase superfamily protein
Chr3_+_5187082 1.09 AT3G15357.1
AT3G15357
phosphopantothenoylcysteine decarboxylase subunit
Chr5_+_25939562 1.09 AT5G64905.1
PROPEP3
elicitor peptide 3 precursor
Chr2_-_12277245 1.09 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
Chr4_-_11585391 1.08 AT4G21830.2
MSRB7
methionine sulfoxide reductase B7
Chr5_-_22230663 1.08 AT5G54710.2
AT5G54710
Ankyrin repeat family protein
Chr4_-_11585542 1.07 AT4G21830.1
MSRB7
methionine sulfoxide reductase B7
Chr1_+_28746833 1.07 AT1G76600.1
AT1G76600
poly polymerase
Chr5_-_15175566 1.07 AT5G38030.1
AT5G38030
MATE efflux family protein
Chr3_-_18804731 1.06 AT3G50640.1
AT3G50640
hypothetical protein
Chr3_+_5692607 1.06 AT3G16720.1
ATL2
TOXICOS EN LEVADURA 2
Chr1_+_27308513 1.06 AT1G72520.1
LOX4
PLAT/LH2 domain-containing lipoxygenase family protein
Chr1_-_4970311 1.06 AT1G14520.1
AT1G14520.3
AT1G14520.4
MIOX1
myo-inositol oxygenase 1
Chr5_+_15616770 1.06 AT5G39020.1
AT5G39020
Malectin/receptor-like protein kinase family protein
Chr1_+_8102728 1.05 AT1G22890.1
AT1G22890
transmembrane protein
Chr4_-_11397726 1.05 AT4G21390.1
AT4G21390.2
B120
S-locus lectin protein kinase family protein
Chr1_+_18807672 1.05 AT1G50740.1
AT1G50740
Transmembrane proteins 14C
Chr1_-_21063047 1.05 AT1G56250.1
PP2-B14
phloem protein 2-B14
Chr1_+_24349399 1.05 AT1G65486.3
AT1G65486.4
AT1G65486.1
AT1G65486.2
AT1G65486
transmembrane protein
Chr1_-_5129523 1.05 AT1G14870.2
PCR2
PLANT CADMIUM RESISTANCE 2
Chr2_+_16108235 1.04 AT2G38470.1
WRKY33
WRKY DNA-binding protein 33
Chr2_-_12889931 1.04 AT2G30210.1
LAC3
laccase 3
Chr1_-_1662259 1.04 AT1G05575.1
AT1G05575
transmembrane protein
Chr3_-_790693 1.04 AT3G03341.1
AT3G03341
cold-regulated protein
Chr3_-_19427230 1.04 AT3G52400.1
SYP122
syntaxin of plants 122
Chr3_-_3731251 1.04 AT3G11820.1
AT3G11820.2
SYP121
syntaxin of plants 121
Chr1_-_5129731 1.04 AT1G14870.1
PCR2
PLANT CADMIUM RESISTANCE 2
Chr4_+_6967709 1.04 AT4G11470.2
AT4G11470.1
CRK31
cysteine-rich RLK (RECEPTOR-like protein kinase) 31
Chr5_+_4904873 1.04 AT5G15130.2
WRKY72
WRKY DNA-binding protein 72
Chr5_-_19669920 1.04 AT5G48540.1
AT5G48540
receptor-like protein kinase-related family protein
Chr5_-_17025361 1.03 AT5G42580.1
CYP705A12
cytochrome P450, family 705, subfamily A, polypeptide 12
Chr5_+_26573964 1.03 AT5G66590.1
AT5G66590
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr3_+_3442237 1.03 AT3G10985.1
SAG20
senescence associated gene 20
Chr1_+_11931149 1.03 AT1G32928.1
AT1G32928
Avr9/Cf-9 rapidly elicited protein
Chr3_+_18465318 1.03 AT3G49780.1
PSK4
phytosulfokine 4 precursor
Chr1_-_8839549 1.03 AT1G25220.2
AT1G25220.1
ASB1
anthranilate synthase beta subunit 1
Chr4_+_10073711 1.02 AT4G18205.1
AT4G18205
Nucleotide-sugar transporter family protein
Chr5_+_834859 1.02 AT5G03390.1
AT5G03390
hypothetical protein (DUF295)
Chr5_+_22075277 1.01 AT5G54370.1
AT5G54370
Late embryogenesis abundant (LEA) protein-like protein
Chr4_+_16354857 1.01 AT4G34150.1
AT4G34150
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr2_-_7707954 1.01 AT2G17740.1
AT2G17740
Cysteine/Histidine-rich C1 domain family protein
Chr5_+_4904290 1.01 AT5G15130.1
WRKY72
WRKY DNA-binding protein 72
Chr1_-_29982819 1.01 AT1G79680.1
WAKL10
WALL ASSOCIATED KINASE (WAK)-LIKE 10
Chr5_+_8217191 1.01 AT5G24210.1
AT5G24210.2
AT5G24210.3
AT5G24210
alpha/beta-Hydrolases superfamily protein
Chr4_-_12156881 1.00 AT4G23220.1
CRK14
cysteine-rich RECEPTOR-like kinase
Chr4_-_11902642 1.00 AT4G22610.1
AT4G22610
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_16185044 1.00 AT4G33730.1
AT4G33730
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr5_+_24707445 1.00 AT5G61440.2
AT5G61440.1
ACHT5
atypical CYS HIS rich thioredoxin 5
Chr4_+_7148124 0.99 AT4G11890.3
AT4G11890.1
AT4G11890.4
ARCK1
Protein kinase superfamily protein
Chr5_+_25934568 0.98 AT5G64890.1
PROPEP2
elicitor peptide 2 precursor
Chr2_+_13036814 0.98 AT2G30600.4
AT2G30600.5
AT2G30600.1
AT2G30600.3
AT2G30600
BTB/POZ domain-containing protein
Chr1_+_12188678 0.98 AT1G33610.1
AT1G33610
Leucine-rich repeat (LRR) family protein
Chr1_-_4633299 0.98 AT1G13520.1
AT1G13520
hypothetical protein (DUF1262)
Chr4_+_8688250 0.98 AT4G15233.1
AT4G15233.7
AT4G15233.8
AT4G15233.2
ABCG42
ABC-2 and Plant PDR ABC-type transporter family protein
Chr4_+_18185437 0.98 AT4G39030.1
EDS5
MATE efflux family protein
Chr3_+_5337475 0.98 AT3G15760.1
AT3G15760
cytochrome P450 family protein
Chr1_+_30241452 0.97 AT1G80440.1
AT1G80440
Galactose oxidase/kelch repeat superfamily protein
Chr5_-_22358381 0.97 AT5G55090.1
AT5G55090.2
MAPKKK15
mitogen-activated protein kinase kinase kinase 15
Chr1_-_29638773 0.97 AT1G78830.1
AT1G78830
Curculin-like (mannose-binding) lectin family protein
Chr5_+_3545211 0.97 AT5G11140.1
AT5G11140
phospholipase-like protein (PEARLI 4) family protein
Chr3_+_5249112 0.96 AT3G15518.1
AT3G15518
hypothetical protein
Chr5_+_17760865 0.96 AT5G44130.1
FLA13
FASCICLIN-like arabinogalactan protein 13 precursor
Chr2_+_13037238 0.96 AT2G30600.6
AT2G30600.2
AT2G30600
BTB/POZ domain-containing protein
Chr1_+_24637196 0.96 AT1G66160.2
AT1G66160.1
CMPG1
CYS, MET, PRO, and GLY protein 1
Chr1_+_24357749 0.96 AT1G65500.1
AT1G65500
transmembrane protein
Chr5_-_1570609 0.96 AT5G05300.1
AT5G05300
hypothetical protein
Chr5_-_25843555 0.95 AT5G64660.1
CMPG2
CYS, MET, PRO, and GLY protein 2
Chr2_-_11800928 0.95 AT2G27660.1
AT2G27660
Cysteine/Histidine-rich C1 domain family protein
Chr1_+_5525293 0.95 AT1G16130.1
WAKL2
wall associated kinase-like 2
Chr5_+_6921509 0.94 AT5G20480.2
AT5G20480.1
EFR
EF-TU receptor
Chr5_-_8856758 0.94 AT5G25440.1
AT5G25440.2
AT5G25440
Protein kinase superfamily protein
Chr2_-_108803 0.94 AT2G01180.7
AT2G01180.2
AT2G01180.5
AT2G01180.1
AT2G01180.8
AT2G01180.4
AT2G01180.3
PAP1
phosphatidic acid phosphatase 1
Chr4_+_6869863 0.94 AT4G11290.1
AT4G11290
Peroxidase superfamily protein
Chr2_-_17441416 0.94 AT2G41810.1
AT2G41810
imidazolonepropionase (Protein of unknown function, DUF642)
Chr4_+_12134973 0.93 AT4G23170.1
EP1
receptor-like protein kinase-related family protein
Chr4_+_9759203 0.93 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
Chr1_+_7911843 0.93 AT1G22410.1
AT1G22410
Class-II DAHP synthetase family protein
Chr5_+_17734706 0.93 AT5G44070.1
AT5G44070.2
CAD1
phytochelatin synthase 1 (PCS1)
Chr2_-_14399170 0.93 AT2G34090.5
AT2G34090.1
AT2G34090.2
AT2G34090.3
AT2G34090.4
MEE18
maternal effect embryo arrest 18

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G40740

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 4.5 GO:0080003 thalianol metabolic process(GO:0080003)
0.7 2.2 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.6 7.9 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.6 1.8 GO:0010045 response to nickel cation(GO:0010045)
0.5 2.7 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.5 2.6 GO:0019310 inositol catabolic process(GO:0019310)
0.5 2.1 GO:0010185 regulation of cellular defense response(GO:0010185)
0.5 2.3 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.4 9.2 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.4 1.7 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.4 1.2 GO:0010184 cytokinin transport(GO:0010184)
0.4 1.1 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.4 1.5 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.4 0.8 GO:0033530 raffinose metabolic process(GO:0033530)
0.4 1.8 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.3 3.0 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.3 1.3 GO:0071467 cellular response to pH(GO:0071467)
0.3 1.3 GO:0051938 L-amino acid import(GO:0043092) L-glutamate import(GO:0051938)
0.3 1.2 GO:0019427 acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.3 1.2 GO:0035264 multicellular organism growth(GO:0035264)
0.3 1.4 GO:0071323 cellular response to chitin(GO:0071323)
0.3 0.9 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.3 2.6 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.3 2.8 GO:0000304 response to singlet oxygen(GO:0000304)
0.2 0.5 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.2 0.2 GO:0010447 response to acidic pH(GO:0010447)
0.2 0.7 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.2 2.3 GO:0010120 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.2 2.5 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.2 1.6 GO:0009745 sucrose mediated signaling(GO:0009745)
0.2 0.7 GO:0055089 fatty acid homeostasis(GO:0055089)
0.2 28.1 GO:0010200 response to chitin(GO:0010200)
0.2 0.8 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.2 0.6 GO:0035445 borate transmembrane transport(GO:0035445) cellular response to boron-containing substance levels(GO:0080029)
0.2 1.3 GO:0016107 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.2 1.8 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.2 2.9 GO:0015865 purine nucleotide transport(GO:0015865)
0.2 0.7 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.2 0.9 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.2 1.4 GO:0009061 anaerobic respiration(GO:0009061)
0.2 0.7 GO:0046440 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.2 0.8 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.2 1.8 GO:0052547 negative regulation of peptidase activity(GO:0010466) regulation of peptidase activity(GO:0052547)
0.2 1.1 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.2 1.4 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.2 3.1 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.2 0.5 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.2 0.9 GO:0090579 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.2 1.4 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 1.0 GO:0006597 spermine biosynthetic process(GO:0006597)
0.1 2.3 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 1.0 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.1 0.6 GO:0006741 NADP biosynthetic process(GO:0006741)
0.1 0.4 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.1 2.7 GO:0006863 purine nucleobase transport(GO:0006863)
0.1 1.7 GO:0009554 megasporogenesis(GO:0009554)
0.1 2.1 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.1 0.4 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 0.3 GO:0071276 phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.1 2.0 GO:0030497 fatty acid elongation(GO:0030497)
0.1 2.1 GO:1901072 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.1 2.3 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.1 0.3 GO:0015840 urea transport(GO:0015840)
0.1 0.5 GO:0035494 SNARE complex disassembly(GO:0035494)
0.1 0.4 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.1 0.1 GO:0050891 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.1 0.4 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.1 1.0 GO:0016045 detection of bacterium(GO:0016045)
0.1 0.4 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1 0.4 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.1 0.3 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.4 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.1 0.8 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.1 0.7 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.1 0.3 GO:0006056 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
0.1 0.6 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.1 0.5 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.1 1.7 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 2.7 GO:0009612 response to mechanical stimulus(GO:0009612)
0.1 0.4 GO:0050992 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.1 0.7 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 0.8 GO:0009080 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.1 0.1 GO:0046655 folic acid metabolic process(GO:0046655)
0.1 1.1 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.1 1.3 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 0.3 GO:0052542 defense response by callose deposition(GO:0052542)
0.1 0.6 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.6 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.1 2.7 GO:0010193 response to ozone(GO:0010193)
0.1 0.3 GO:0051639 actin filament network formation(GO:0051639)
0.1 0.4 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.1 0.4 GO:1901600 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.1 0.6 GO:0019673 GDP-mannose metabolic process(GO:0019673)
0.1 0.7 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.1 2.7 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.1 1.5 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.1 0.7 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.1 0.3 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 15.2 GO:0071456 cellular response to hypoxia(GO:0071456)
0.1 1.0 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.1 0.4 GO:0006884 cell volume homeostasis(GO:0006884)
0.1 2.4 GO:0002239 response to oomycetes(GO:0002239)
0.1 0.4 GO:0060151 peroxisome localization(GO:0060151)
0.1 0.2 GO:0051289 protein homotetramerization(GO:0051289)
0.1 2.2 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.1 1.7 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.1 0.5 GO:0090057 root radial pattern formation(GO:0090057)
0.1 0.5 GO:0090059 protoxylem development(GO:0090059)
0.1 0.2 GO:1902751 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.1 0.2 GO:1903335 regulation of vacuolar transport(GO:1903335) regulation of intracellular mRNA localization(GO:1904580)
0.1 0.2 GO:0071258 cellular response to gravity(GO:0071258)
0.1 0.7 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.1 GO:0015800 acidic amino acid transport(GO:0015800)
0.1 2.9 GO:0016126 sterol biosynthetic process(GO:0016126)
0.1 0.1 GO:0055122 response to very low light intensity stimulus(GO:0055122)
0.1 0.4 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.1 0.3 GO:0010272 response to silver ion(GO:0010272)
0.1 0.3 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.1 0.3 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.1 0.2 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.1 1.0 GO:0010274 hydrotropism(GO:0010274)
0.1 0.3 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.1 0.2 GO:0006015 5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.1 0.3 GO:0042040 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) metal incorporation into metallo-molybdopterin complex(GO:0042040) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.1 0.3 GO:0071423 malate transmembrane transport(GO:0071423)
0.1 3.1 GO:0009407 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.1 0.4 GO:0070301 cellular response to hydrogen peroxide(GO:0070301)
0.1 0.3 GO:0006409 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 2.3 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.1 0.1 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.1 0.3 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.1 0.3 GO:0042218 1-aminocyclopropane-1-carboxylate metabolic process(GO:0018871) 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 0.2 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.1 0.5 GO:0010052 guard cell differentiation(GO:0010052)
0.1 0.2 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.1 0.4 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.1 0.4 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.1 0.2 GO:0090224 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.1 1.3 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.1 0.4 GO:0046135 pyrimidine ribonucleoside catabolic process(GO:0046133) pyrimidine nucleoside catabolic process(GO:0046135)
0.1 0.2 GO:0099636 cytoplasmic streaming(GO:0099636)
0.1 0.5 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.1 0.4 GO:0046443 FAD metabolic process(GO:0046443)
0.1 0.8 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.1 0.7 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.1 0.3 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.1 0.3 GO:0060919 auxin influx(GO:0060919)
0.1 0.8 GO:0010440 stomatal lineage progression(GO:0010440)
0.1 0.3 GO:1903533 regulation of protein targeting(GO:1903533)
0.1 0.4 GO:0006000 fructose metabolic process(GO:0006000)
0.1 0.3 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.1 0.1 GO:0034080 CENP-A containing nucleosome assembly(GO:0034080) CENP-A containing chromatin organization(GO:0061641)
0.1 0.2 GO:0070193 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.1 1.4 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.1 1.3 GO:0000038 very long-chain fatty acid metabolic process(GO:0000038)
0.1 0.3 GO:0007142 male meiosis II(GO:0007142)
0.1 0.3 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.1 4.4 GO:0045490 pectin catabolic process(GO:0045490)
0.1 0.5 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.0 0.2 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.0 0.5 GO:0010921 regulation of phosphatase activity(GO:0010921)
0.0 0.2 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.0 0.1 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.0 0.2 GO:0006517 protein deglycosylation(GO:0006517)
0.0 0.2 GO:0009557 antipodal cell differentiation(GO:0009557)
0.0 0.6 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.1 GO:0050685 positive regulation of mRNA processing(GO:0050685)
0.0 0.3 GO:0080187 floral organ senescence(GO:0080187)
0.0 0.1 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.0 0.3 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.0 0.5 GO:0015743 malate transport(GO:0015743)
0.0 2.9 GO:0048544 recognition of pollen(GO:0048544)
0.0 0.7 GO:0050821 protein stabilization(GO:0050821)
0.0 0.2 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.1 GO:0017145 stem cell division(GO:0017145)
0.0 2.1 GO:0045292 mRNA cis splicing, via spliceosome(GO:0045292)
0.0 0.1 GO:0009107 lipoate biosynthetic process(GO:0009107)
0.0 0.4 GO:0080190 lateral growth(GO:0080190)
0.0 0.5 GO:0071902 positive regulation of protein serine/threonine kinase activity(GO:0071902)
0.0 0.4 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.0 0.7 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.0 0.1 GO:1903862 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.0 1.3 GO:0006730 one-carbon metabolic process(GO:0006730)
0.0 0.4 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.0 0.0 GO:0034764 positive regulation of transmembrane transport(GO:0034764) positive regulation of ion transmembrane transport(GO:0034767) regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.0 0.9 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.1 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.0 0.5 GO:0019253 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.0 0.5 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.0 0.1 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.0 0.4 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.4 GO:0009405 pathogenesis(GO:0009405)
0.0 0.9 GO:0006568 tryptophan metabolic process(GO:0006568) indolalkylamine metabolic process(GO:0006586)
0.0 1.6 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.0 0.2 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.6 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.3 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.0 0.3 GO:0010264 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.0 1.0 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.3 GO:0045851 pH reduction(GO:0045851)
0.0 2.6 GO:0019932 second-messenger-mediated signaling(GO:0019932)
0.0 0.1 GO:0090342 cell aging(GO:0007569) regulation of cell aging(GO:0090342)
0.0 0.2 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.4 GO:0032409 regulation of transporter activity(GO:0032409)
0.0 0.7 GO:0010214 seed coat development(GO:0010214)
0.0 0.1 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.0 0.1 GO:0010731 protein glutathionylation(GO:0010731)
0.0 1.2 GO:0009863 salicylic acid mediated signaling pathway(GO:0009863)
0.0 0.3 GO:0042659 regulation of cell fate specification(GO:0042659)
0.0 0.7 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 0.3 GO:0048654 anther morphogenesis(GO:0048654) anther wall tapetum morphogenesis(GO:0048655)
0.0 0.9 GO:0043449 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.3 GO:0010037 response to carbon dioxide(GO:0010037)
0.0 0.2 GO:0034724 DNA replication-independent nucleosome organization(GO:0034724)
0.0 0.1 GO:0051101 regulation of DNA binding(GO:0051101)
0.0 0.3 GO:0052325 cell wall pectin biosynthetic process(GO:0052325)
0.0 0.1 GO:0071569 protein ufmylation(GO:0071569)
0.0 0.2 GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation(GO:0006616)
0.0 0.2 GO:0010226 response to lithium ion(GO:0010226)
0.0 0.2 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.3 GO:0009435 NAD biosynthetic process(GO:0009435)
0.0 0.4 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.0 0.3 GO:0032042 mitochondrial DNA metabolic process(GO:0032042)
0.0 0.2 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 0.1 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.0 0.9 GO:0010208 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.0 0.1 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.0 0.4 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 0.2 GO:0019464 glycine catabolic process(GO:0006546) glycine decarboxylation via glycine cleavage system(GO:0019464)
0.0 0.1 GO:0048863 stem cell differentiation(GO:0048863)
0.0 0.7 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.2 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 2.0 GO:0009751 response to salicylic acid(GO:0009751)
0.0 0.5 GO:0009556 microsporogenesis(GO:0009556)
0.0 0.3 GO:0046688 response to copper ion(GO:0046688)
0.0 0.2 GO:0000710 meiotic mismatch repair(GO:0000710)
0.0 1.4 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.0 0.1 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.0 0.1 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.0 0.1 GO:0000023 maltose metabolic process(GO:0000023)
0.0 0.2 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.0 1.1 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.1 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.0 0.2 GO:0050667 transsulfuration(GO:0019346) homocysteine metabolic process(GO:0050667)
0.0 0.3 GO:0000165 MAPK cascade(GO:0000165)
0.0 0.3 GO:0000103 sulfate assimilation(GO:0000103)
0.0 0.6 GO:0030091 protein repair(GO:0030091)
0.0 0.6 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.8 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.2 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.0 0.3 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 0.5 GO:0042542 response to hydrogen peroxide(GO:0042542)
0.0 0.2 GO:0080113 regulation of seed growth(GO:0080113)
0.0 0.2 GO:0010230 alternative respiration(GO:0010230)
0.0 0.1 GO:0072348 sulfur compound transport(GO:0072348)
0.0 0.2 GO:0070370 cellular heat acclimation(GO:0070370)
0.0 0.1 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.0 0.3 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.7 GO:0009664 plant-type cell wall organization(GO:0009664)
0.0 0.4 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 0.2 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.0 0.1 GO:0010219 regulation of vernalization response(GO:0010219)
0.0 0.1 GO:0001578 microtubule bundle formation(GO:0001578)
0.0 0.1 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.2 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.0 0.4 GO:0009585 phototransduction(GO:0007602) red, far-red light phototransduction(GO:0009585)
0.0 0.1 GO:0010451 floral meristem growth(GO:0010451)
0.0 0.2 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.1 GO:0070072 proton-transporting V-type ATPase complex assembly(GO:0070070) vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.0 0.1 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.0 0.1 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.5 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.0 0.1 GO:0043692 monoterpene metabolic process(GO:0043692)
0.0 0.2 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.0 0.1 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.6 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.0 0.1 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.0 0.1 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0 0.1 GO:0022610 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.1 GO:0060548 negative regulation of cell death(GO:0060548)
0.0 0.2 GO:0007052 mitotic spindle organization(GO:0007052)
0.0 0.0 GO:0043901 negative regulation of multi-organism process(GO:0043901)
0.0 0.1 GO:0070982 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.0 0.2 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.2 GO:0044030 regulation of DNA methylation(GO:0044030)
0.0 0.4 GO:0099518 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.1 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 0.2 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.1 GO:0010222 stem vascular tissue pattern formation(GO:0010222)
0.0 0.1 GO:0042126 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.0 0.2 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 0.3 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.1 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.0 0.1 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.1 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.0 0.1 GO:0036065 fucosylation(GO:0036065)
0.0 0.0 GO:0006471 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.0 0.2 GO:0045926 negative regulation of growth(GO:0045926)
0.0 0.1 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.0 0.2 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.0 0.4 GO:0009846 pollen germination(GO:0009846)
0.0 0.0 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.0 0.1 GO:0044211 CTP salvage(GO:0044211)
0.0 0.1 GO:0036260 7-methylguanosine RNA capping(GO:0009452) RNA capping(GO:0036260)
0.0 0.3 GO:0008360 regulation of cell shape(GO:0008360)
0.0 0.3 GO:0010941 regulation of cell death(GO:0010941)
0.0 0.1 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.4 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 0.1 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.5 GO:0035061 interchromatin granule(GO:0035061)
0.3 0.9 GO:0043667 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.3 0.8 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.2 8.3 GO:0010319 stromule(GO:0010319)
0.2 1.3 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.2 0.5 GO:0035371 microtubule plus-end(GO:0035371)
0.1 0.4 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 0.8 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 0.8 GO:0035619 root hair tip(GO:0035619)
0.1 1.1 GO:0043230 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.1 0.3 GO:0032432 actin filament bundle(GO:0032432)
0.1 0.3 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.1 0.2 GO:0030896 checkpoint clamp complex(GO:0030896)
0.1 0.2 GO:0002189 ribose phosphate diphosphokinase complex(GO:0002189)
0.1 0.2 GO:0030093 chloroplast photosystem I(GO:0030093)
0.1 0.4 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.1 0.3 GO:0009346 citrate lyase complex(GO:0009346)
0.1 1.6 GO:0000145 exocyst(GO:0000145)
0.1 0.2 GO:0035101 FACT complex(GO:0035101)
0.1 0.2 GO:0005656 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.1 0.5 GO:0089701 U2AF(GO:0089701)
0.1 0.6 GO:0048226 Casparian strip(GO:0048226)
0.1 0.2 GO:0032301 MutSalpha complex(GO:0032301)
0.1 0.5 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.2 GO:0002178 palmitoyltransferase complex(GO:0002178) serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
0.0 0.3 GO:0038201 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.0 13.3 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.1 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.0 0.3 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 0.2 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 2.3 GO:0031201 SNARE complex(GO:0031201)
0.0 0.2 GO:0044545 NSL complex(GO:0044545)
0.0 0.2 GO:0031312 extrinsic component of organelle membrane(GO:0031312)
0.0 0.2 GO:0010168 ER body(GO:0010168)
0.0 0.2 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.2 GO:0034990 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.0 6.5 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.9 GO:0098590 plasma membrane region(GO:0098590)
0.0 0.2 GO:0005960 glycine cleavage complex(GO:0005960)
0.0 0.5 GO:0016459 myosin complex(GO:0016459)
0.0 0.1 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.0 0.1 GO:0045334 clathrin-coated endocytic vesicle(GO:0045334)
0.0 0.2 GO:0009538 photosystem I reaction center(GO:0009538)
0.0 0.2 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 0.7 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 1.1 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.3 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.0 0.3 GO:0010445 nuclear dicing body(GO:0010445)
0.0 2.8 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.3 GO:0045298 tubulin complex(GO:0045298)
0.0 69.8 GO:0005576 extracellular region(GO:0005576)
0.0 0.1 GO:0005719 nuclear euchromatin(GO:0005719)
0.0 0.3 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.1 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.0 1.4 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.1 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.0 0.1 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.0 0.2 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.6 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.3 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 2.0 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 1.1 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 0.3 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.1 GO:0018444 translation release factor complex(GO:0018444)
0.0 0.1 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.0 0.2 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.1 GO:0030076 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.0 0.1 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 0.3 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 0.3 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 0.1 GO:0005791 rough endoplasmic reticulum(GO:0005791)
0.0 0.2 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 2.5 GO:0005740 mitochondrial envelope(GO:0005740)
0.0 0.1 GO:0098852 lysosomal membrane(GO:0005765) integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576) lytic vacuole membrane(GO:0098852)
0.0 0.1 GO:0030427 site of polarized growth(GO:0030427)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.4 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.7 2.2 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.6 2.9 GO:0042085 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.5 2.6 GO:0050113 inositol oxygenase activity(GO:0050113)
0.5 1.5 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.5 3.7 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.4 1.3 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.4 1.1 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.4 1.5 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.4 1.1 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.4 3.6 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.3 3.0 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.3 0.9 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.3 1.2 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.3 2.1 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.3 9.3 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.3 2.9 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.3 1.6 GO:0016453 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.3 0.5 GO:0052736 beta-glucanase activity(GO:0052736)
0.3 1.3 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.2 0.7 GO:0009924 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.2 1.2 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.2 1.1 GO:0004049 anthranilate synthase activity(GO:0004049)
0.2 0.9 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.2 4.8 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.2 9.0 GO:0008171 O-methyltransferase activity(GO:0008171)
0.2 1.0 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
0.2 1.2 GO:0015105 arsenite transmembrane transporter activity(GO:0015105)
0.2 1.7 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.2 0.5 GO:0010331 gibberellin binding(GO:0010331)
0.2 1.3 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.2 4.4 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.2 0.7 GO:1901982 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.2 0.5 GO:0008909 isochorismate synthase activity(GO:0008909)
0.2 1.6 GO:0004096 catalase activity(GO:0004096)
0.2 1.0 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.2 1.4 GO:0001653 peptide receptor activity(GO:0001653)
0.2 1.0 GO:0004383 guanylate cyclase activity(GO:0004383)
0.2 0.7 GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.2 1.8 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.2 0.5 GO:0035671 enone reductase activity(GO:0035671)
0.2 3.9 GO:0030414 peptidase inhibitor activity(GO:0030414)
0.2 0.5 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.2 1.1 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.2 0.5 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
0.2 0.9 GO:0005313 L-glutamate transmembrane transporter activity(GO:0005313)
0.1 3.2 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.7 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.1 0.4 GO:0000309 nicotinamide-nucleotide adenylyltransferase activity(GO:0000309)
0.1 0.4 GO:0050263 uridine nucleosidase activity(GO:0045437) ribosylpyrimidine nucleosidase activity(GO:0050263)
0.1 0.4 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.1 1.7 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 0.6 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 0.6 GO:0004112 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.1 0.4 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.1 0.4 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.1 0.6 GO:0052659 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.1 0.5 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.5 GO:0043916 DNA-7-methylguanine glycosylase activity(GO:0043916)
0.1 0.5 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.1 0.6 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.1 0.5 GO:0019156 isoamylase activity(GO:0019156)
0.1 0.5 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 0.5 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.1 0.6 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 2.4 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 0.3 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.1 1.0 GO:0043495 protein anchor(GO:0043495)
0.1 0.8 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.1 0.3 GO:0051010 microtubule plus-end binding(GO:0051010)
0.1 1.4 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.1 0.7 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 0.8 GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity(GO:0016756)
0.1 1.7 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.1 1.4 GO:0008061 chitin binding(GO:0008061)
0.1 0.7 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.1 0.3 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.1 0.7 GO:0050302 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.1 0.4 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.1 2.7 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.6 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.1 0.4 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.1 2.7 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 0.3 GO:0000009 alpha-1,6-mannosyltransferase activity(GO:0000009)
0.1 0.5 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 0.8 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.1 0.6 GO:0004766 spermidine synthase activity(GO:0004766)
0.1 1.2 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 1.2 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.1 0.3 GO:0047443 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.1 1.0 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.1 1.1 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.1 0.3 GO:0070704 sterol desaturase activity(GO:0070704)
0.1 0.7 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.1 8.5 GO:0004601 peroxidase activity(GO:0004601)
0.1 0.4 GO:0004441 inositol-1,4-bisphosphate 1-phosphatase activity(GO:0004441)
0.1 0.3 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.1 0.3 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.1 0.5 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.1 1.6 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.1 0.4 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.1 3.4 GO:0004364 glutathione transferase activity(GO:0004364)
0.1 0.4 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 1.0 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 1.7 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.1 0.6 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 0.2 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.1 0.5 GO:0051183 vitamin transporter activity(GO:0051183)
0.1 0.3 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.1 1.2 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.1 0.1 GO:0000064 L-ornithine transmembrane transporter activity(GO:0000064)
0.1 0.3 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.1 0.2 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.1 0.6 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 0.5 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.2 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.1 0.2 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 0.3 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.1 0.4 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.6 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 2.2 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.1 1.3 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 1.1 GO:0004568 chitinase activity(GO:0004568)
0.1 0.7 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.1 0.3 GO:0004324 ferredoxin-NADP+ reductase activity(GO:0004324)
0.1 4.4 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 0.3 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.2 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.1 2.6 GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors(GO:0016706)
0.1 1.3 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.1 0.2 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.1 0.2 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 0.3 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.1 0.4 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 0.5 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.2 GO:0032138 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.1 0.2 GO:0030275 LRR domain binding(GO:0030275)
0.1 0.9 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.3 GO:0008430 selenium binding(GO:0008430)
0.1 0.4 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 0.3 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.1 1.7 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.7 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 6.7 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 0.2 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.2 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517) glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.0 0.2 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.0 2.1 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.2 GO:0015002 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.4 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.1 GO:0016979 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.0 0.7 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.1 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.0 0.1 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.0 0.1 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.0 0.1 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.0 0.5 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.0 0.8 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.0 0.2 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.0 0.5 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 0.7 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 0.2 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.2 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.2 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.0 0.4 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.0 0.1 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.0 1.8 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.9 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.2 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.0 0.1 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.0 0.1 GO:0008481 sphinganine kinase activity(GO:0008481)
0.0 0.2 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.0 0.4 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 4.8 GO:0005507 copper ion binding(GO:0005507)
0.0 0.1 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 0.1 GO:0016211 ammonia ligase activity(GO:0016211) acid-ammonia (or amide) ligase activity(GO:0016880)
0.0 0.4 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.6 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.0 3.9 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.1 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.2 GO:0004758 serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.0 0.1 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.0 0.2 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 0.1 GO:0003959 NADPH dehydrogenase activity(GO:0003959) protochlorophyllide reductase activity(GO:0016630)
0.0 0.5 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 0.2 GO:0016004 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.0 0.7 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.2 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.3 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.2 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.0 0.3 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 1.3 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.2 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.2 GO:0010485 H4 histone acetyltransferase activity(GO:0010485)
0.0 0.4 GO:0003951 NAD+ kinase activity(GO:0003951)
0.0 0.6 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.1 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.0 0.1 GO:0015929 hexosaminidase activity(GO:0015929)
0.0 0.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.6 GO:0008810 cellulase activity(GO:0008810)
0.0 1.2 GO:0070008 serine-type exopeptidase activity(GO:0070008)
0.0 0.1 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.3 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.0 0.3 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.2 GO:0008865 fructokinase activity(GO:0008865)
0.0 0.2 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.0 0.4 GO:0051213 dioxygenase activity(GO:0051213)
0.0 0.1 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.0 0.1 GO:0010313 phytochrome binding(GO:0010313)
0.0 8.8 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 0.2 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.0 0.7 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.1 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.2 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.5 GO:0051087 chaperone binding(GO:0051087)
0.0 1.0 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.0 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 0.9 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.1 GO:0035241 protein-arginine omega-N monomethyltransferase activity(GO:0035241)
0.0 0.2 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.1 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 1.0 GO:0016298 lipase activity(GO:0016298)
0.0 0.1 GO:0008198 ferrous iron binding(GO:0008198)
0.0 0.2 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.4 GO:0005179 hormone activity(GO:0005179)
0.0 0.7 GO:0080043 quercetin 3-O-glucosyltransferase activity(GO:0080043)
0.0 0.1 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 0.2 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.3 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.0 0.3 GO:0031386 protein tag(GO:0031386)
0.0 2.3 GO:0020037 heme binding(GO:0020037)
0.0 1.2 GO:0005516 calmodulin binding(GO:0005516)
0.0 0.1 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 0.0 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.0 0.1 GO:0008083 growth factor activity(GO:0008083)
0.0 0.1 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.0 0.0 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.0 0.1 GO:0008494 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.0 0.1 GO:0000014 single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.0 0.9 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144) carbohydrate transporter activity(GO:1901476)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 7.0 PID CMYB PATHWAY C-MYB transcription factor network
0.4 1.1 PID IL12 2PATHWAY IL12-mediated signaling events
0.1 0.2 PID AURORA A PATHWAY Aurora A signaling
0.1 0.2 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.0 0.3 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.0 0.2 PID P73PATHWAY p73 transcription factor network
0.0 0.2 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.0 0.1 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network
0.0 0.2 PID E2F PATHWAY E2F transcription factor network
0.0 0.2 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.0 0.1 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.0 0.0 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 7.2 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.2 1.1 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.2 0.5 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.1 0.5 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.1 0.8 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.2 REACTOME PKB MEDIATED EVENTS Genes involved in PKB-mediated events
0.1 0.2 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.1 0.4 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 0.7 REACTOME CLASS I MHC MEDIATED ANTIGEN PROCESSING PRESENTATION Genes involved in Class I MHC mediated antigen processing & presentation
0.1 0.5 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.2 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.0 0.2 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.0 0.4 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.1 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.0 0.1 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.0 0.1 REACTOME G ALPHA I SIGNALLING EVENTS Genes involved in G alpha (i) signalling events
0.0 0.2 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.0 0.2 REACTOME RNA POL II PRE TRANSCRIPTION EVENTS Genes involved in RNA Polymerase II Pre-transcription Events
0.0 0.1 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.0 0.8 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.0 0.0 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions