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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G38340

Z-value: 1.05

Transcription factors associated with AT2G38340

Gene Symbol Gene ID Gene Info
AT2G38340
AT2G38340 Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
DREB19arTal_v1_Chr2_-_16068615_160686150.342.4e-01Click!

Activity profile of AT2G38340 motif

Sorted Z-values of AT2G38340 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_17712290 3.20 AT2G42540.2
AT2G42540.4
AT2G42540.1
AT2G42540.3
COR15A
cold-regulated 15a
Chr5_+_21240717 2.08 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
Chr1_+_28975255 1.92 AT1G77120.1
ADH1
alcohol dehydrogenase 1
Chr1_+_3019639 1.82 AT1G09350.1
GolS3
galactinol synthase 3
Chr1_+_3020221 1.71 AT1G09350.2
GolS3
galactinol synthase 3
Chr4_-_7401951 1.68 AT4G12470.1
AZI1
azelaic acid induced 1
Chr2_-_19370478 1.38 AT2G47180.1
GolS1
galactinol synthase 1
Chr1_-_22280593 1.34 AT1G60470.1
GolS4
galactinol synthase 4
Chr3_-_2699257 1.33 AT3G08860.2
PYD4
PYRIMIDINE 4
Chr3_-_2699420 1.30 AT3G08860.1
PYD4
PYRIMIDINE 4
Chr2_+_15106940 1.17 AT2G35960.1
NHL12
NDR1/HIN1-like 12
Chr5_+_5211719 1.17 AT5G15970.1
KIN2
stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
Chr4_+_17639 1.05 AT4G00050.1
AT4G00050.3
AT4G00050.2
UNE10
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_+_27538190 1.00 AT1G73220.1
OCT1
organic cation/carnitine transporter1
Chr2_+_1993038 0.99 AT2G05440.2
AT2G05440.9
AT2G05440.5
AT2G05440.1
AT2G05440.6
AT2G05440.3
AT2G05440.4
AT2G05440.8
AT2G05440.7
GRP9
GLYCINE RICH PROTEIN 9
Chr3_+_15983199 0.94 AT3G44300.1
NIT2
nitrilase 2
Chr4_-_15954803 0.94 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Chr4_+_9865103 0.93 AT4G17730.2
AT4G17730.1
SYP23
syntaxin of plants 23
Chr4_-_433938 0.93 AT4G01000.2
AT4G01000.1
AT4G01000
Ubiquitin-like superfamily protein
Chr5_+_4776733 0.92 AT5G14780.1
AT5G14780.3
AT5G14780.2
FDH
formate dehydrogenase
Chr2_-_12343443 0.91 AT2G28780.1
AT2G28780
P-hydroxybenzoic acid efflux pump subunit
Chr1_-_17266724 0.91 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
Chr1_-_450426 0.87 AT1G02280.1
AT1G02280.2
TOC33
translocon at the outer envelope membrane of chloroplasts 33
Chr2_+_13814543 0.85 AT2G32540.1
CSLB04
cellulose synthase-like B4
Chr3_-_3238267 0.85 AT3G10410.1
SCPL49
SERINE CARBOXYPEPTIDASE-LIKE 49
Chr3_+_22635803 0.85 AT3G61160.3
AT3G61160.6
AT3G61160.5
AT3G61160.4
AT3G61160.2
AT3G61160.1
AT3G61160
Protein kinase superfamily protein
Chr3_+_23211287 0.84 AT3G62740.2
AT3G62740.1
BGLU7
beta glucosidase 7
Chr1_+_28498821 0.84 AT1G75900.1
AT1G75900
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_-_7054281 0.83 AT5G20830.3
SUS1
sucrose synthase 1
Chr3_+_3776177 0.82 AT3G11930.2
AT3G11930.3
AT3G11930.1
AT3G11930.4
AT3G11930
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr5_+_2866222 0.82 AT5G09220.1
AAP2
amino acid permease 2
Chr1_-_30142697 0.82 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_+_11181504 0.81 AT1G31280.1
AGO2
Argonaute family protein
Chr5_-_7054713 0.81 AT5G20830.1
SUS1
sucrose synthase 1
Chr4_+_16542242 0.81 AT4G34650.1
SQS2
squalene synthase 2
Chr1_-_21626402 0.80 AT1G58290.1
HEMA1
Glutamyl-tRNA reductase family protein
Chr5_-_7055398 0.79 AT5G20830.2
SUS1
sucrose synthase 1
Chr2_+_15053483 0.79 AT2G35840.4
AT2G35840.2
AT2G35840.1
AT2G35840
Sucrose-6F-phosphate phosphohydrolase family protein
Chr2_-_9056481 0.79 AT2G21130.1
AT2G21130
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr5_+_9261479 0.78 AT5G26570.1
AT5G26570.2
PWD
chloroplastidic phosphoglucan, water dikinase (ATGWD3)
Chr1_+_28829243 0.78 AT1G76800.1
AT1G76800
Vacuolar iron transporter (VIT) family protein
Chr3_-_18718396 0.78 AT3G50440.1
MES10
methylesterase
Chr1_-_3518035 0.77 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
Chr5_+_17951442 0.77 AT5G44565.2
AT5G44565.1
AT5G44565.3
AT5G44565
transmembrane protein
Chr4_+_16543154 0.76 AT4G34650.2
SQS2
squalene synthase 2
Chr1_-_7086873 0.76 AT1G20440.1
COR47
cold-regulated 47
Chr2_-_521707 0.75 AT2G02080.4
AT2G02080.2
AT2G02080.5
AT2G02080.6
AT2G02080.3
AT2G02080.1
IDD4
indeterminate(ID)-domain 4
Chr1_-_8189220 0.74 AT1G23090.4
AT1G23090.1
AT1G23090.3
AT1G23090.2
AST91
sulfate transporter 91
Chr1_+_23953099 0.74 AT1G64500.1
AT1G64500
Glutaredoxin family protein
Chr2_-_8495892 0.74 AT2G19650.1
AT2G19650
Cysteine/Histidine-rich C1 domain family protein
Chr1_-_507268 0.74 AT1G02460.1
AT1G02460
Pectin lyase-like superfamily protein
Chr5_+_4206738 0.74 AT5G13200.2
AT5G13200.1
AT5G13200
GRAM domain family protein
Chr4_+_10103866 0.73 AT4G18280.1
AT4G18280
glycine-rich cell wall protein-like protein
Chr4_-_13864327 0.72 AT4G27830.2
BGLU10
beta glucosidase 10
Chr2_-_17379059 0.72 AT2G41680.1
NTRC
NADPH-dependent thioredoxin reductase C
Chr1_-_4679594 0.72 AT1G13640.2
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
Chr5_-_8659352 0.72 AT5G25110.1
CIPK25
CBL-interacting protein kinase 25
Chr2_-_5675995 0.72 AT2G13610.1
ABCG5
ABC-2 type transporter family protein
Chr5_+_21020014 0.71 AT5G51750.1
SBT1.3
subtilase 1.3
Chr4_-_13864659 0.71 AT4G27830.1
BGLU10
beta glucosidase 10
Chr1_-_4845847 0.71 AT1G14170.2
AT1G14170.1
AT1G14170.3
AT1G14170
RNA-binding KH domain-containing protein
Chr1_-_29002135 0.71 AT1G77180.1
AT1G77180.3
AT1G77180.2
SKIP
chromatin protein family
Chr2_-_856725 0.70 AT2G02950.1
PKS1
phytochrome kinase substrate 1
Chr1_-_28302728 0.70 AT1G75410.3
AT1G75410.1
BLH3
BEL1-like homeodomain 3
Chr1_-_4679862 0.69 AT1G13640.1
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
Chr1_+_25746697 0.69 AT1G68570.1
AT1G68570
Major facilitator superfamily protein
Chr3_-_18375784 0.69 AT3G49580.3
AT3G49580.2
LSU1
response to low sulfur 1
Chr2_+_13940187 0.69 AT2G32860.2
AT2G32860.1
BGLU33
beta glucosidase 33
Chr4_+_12456342 0.67 AT4G23990.1
CSLG3
cellulose synthase like G3
Chr2_+_18328322 0.67 AT2G44410.1
AT2G44410
RING/U-box superfamily protein
Chr4_+_10953540 0.66 AT4G20280.1
TAF11
TBP-associated factor 11
Chr4_+_18413775 0.65 AT4G39675.1
AT4G39675
hypothetical protein
Chr3_+_5720941 0.65 AT3G16800.5
AT3G16800.4
AT3G16800.2
AT3G16800.6
AT3G16800.1
AT3G16800
Protein phosphatase 2C family protein
Chr1_+_25746994 0.65 AT1G68570.2
AT1G68570
Major facilitator superfamily protein
Chr5_-_5759817 0.64 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr5_-_17022723 0.64 AT5G42570.1
AT5G42570
B-cell receptor-associated 31-like protein
Chr1_+_22737475 0.64 AT1G61620.1
AT1G61620
phosphoinositide binding protein
Chr5_+_26884203 0.64 AT5G67385.3
AT5G67385.1
AT5G67385.5
AT5G67385.4
AT5G67385
Phototropic-responsive NPH3 family protein
Chr3_-_19139423 0.64 AT3G51600.1
LTP5
lipid transfer protein 5
Chr1_+_28177670 0.64 AT1G75040.1
PR5
pathogenesis-related protein 5
Chr4_-_16799553 0.63 AT4G35300.11
AT4G35300.1
AT4G35300.2
AT4G35300.9
AT4G35300.3
AT4G35300.8
AT4G35300.6
AT4G35300.5
AT4G35300.4
AT4G35300.7
AT4G35300.10
TMT2
tonoplast monosaccharide transporter2
Chr2_-_9266393 0.63 AT2G21660.2
GRP7
cold, circadian rhythm, and rna binding 2
Chr1_+_18770937 0.63 AT1G50660.1
AT1G50660
actin cytoskeleton-regulatory complex pan-like protein
Chr1_+_15976805 0.63 AT1G42550.1
PMI1
plastid movement impaired1
Chr4_-_712643 0.62 AT4G01670.1
AT4G01670
hypothetical protein
Chr5_-_14256284 0.62 AT5G36220.2
AT5G36220.1
CYP81D1
cytochrome p450 81d1
Chr3_-_18373147 0.61 AT3G49570.1
LSU3
response to low sulfur 3
Chr4_+_12457466 0.61 AT4G23990.2
CSLG3
cellulose synthase like G3
Chr5_-_20720681 0.61 AT5G50920.1
CLPC1
CLPC homologue 1
Chr3_-_18375940 0.61 AT3G49580.1
LSU1
response to low sulfur 1
Chr5_-_19358125 0.61 AT5G47810.1
PFK2
phosphofructokinase 2
Chr5_-_7652714 0.61 AT5G22880.1
HTB2
histone B2
Chr1_-_28302571 0.61 AT1G75410.2
BLH3
BEL1-like homeodomain 3
Chr3_-_18684346 0.61 AT3G50370.1
AT3G50370.2
AT3G50370
hypothetical protein
Chr3_+_16386395 0.60 AT3G44890.1
RPL9
ribosomal protein L9
Chr2_-_9266557 0.60 AT2G21660.1
GRP7
cold, circadian rhythm, and rna binding 2
Chr5_+_22686832 0.60 AT5G56030.2
HSP81-2
heat shock protein 81-2
Chr1_+_23515680 0.60 AT1G63420.1
AT1G63420.2
AT1G63420
O-glucosyltransferase-like protein (DUF821)
Chr3_+_4403355 0.59 AT3G13510.1
AT3G13510
carboxyl-terminal peptidase, putative (DUF239)
Chr5_+_22686473 0.59 AT5G56030.1
HSP81-2
heat shock protein 81-2
Chr5_-_7955622 0.59 AT5G23590.2
AT5G23590
DNAJ heat shock N-terminal domain-containing protein
Chr3_+_18262290 0.59 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
iqd21
IQ-domain 21
Chr3_-_1825628 0.58 AT3G06040.2
AT3G06040.3
AT3G06040.1
AT3G06040
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Chr1_+_18870059 0.58 AT1G50920.1
AT1G50920
Nucleolar GTP-binding protein
Chr2_+_15053634 0.58 AT2G35840.3
AT2G35840
Sucrose-6F-phosphate phosphohydrolase family protein
Chr1_-_23786800 0.58 AT1G64080.1
MAKR2
membrane-associated kinase regulator
Chr2_-_15623104 0.58 AT2G37200.1
AT2G37200.2
AT2G37200
Uncharacterized protein family (UPF0497)
Chr1_-_22382422 0.58 AT1G60790.1
TBL2
trichome birefringence-like protein (DUF828)
Chr2_+_15528877 0.58 AT2G36970.1
AT2G36970
UDP-Glycosyltransferase superfamily protein
Chr3_+_5081780 0.58 AT3G15095.2
AT3G15095.1
AT3G15095.3
HCF243
Serine/Threonine-kinase pakA-like protein
Chr1_+_27338034 0.57 AT1G72600.2
AT1G72600.1
AT1G72600
hydroxyproline-rich glycoprotein family protein
Chr1_+_7404328 0.57 AT1G21140.1
AT1G21140
Vacuolar iron transporter (VIT) family protein
Chr5_+_25537074 0.57 AT5G63810.1
BGAL10
beta-galactosidase 10
Chr3_+_10330547 0.56 AT3G27870.1
AT3G27870.2
AT3G27870.3
AT3G27870
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr3_-_7608444 0.56 AT3G21600.3
AT3G21600.2
AT3G21600.1
AT3G21600
Senescence/dehydration-associated protein-like protein
Chr1_-_29749085 0.56 AT1G79080.1
AT1G79080
Pentatricopeptide repeat (PPR) superfamily protein
Chr3_-_16558169 0.55 AT3G45210.1
AT3G45210
transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
Chr4_+_9780224 0.55 AT4G17560.1
AT4G17560
Ribosomal protein L19 family protein
Chr2_+_18061716 0.55 AT2G43500.1
AT2G43500.3
AT2G43500.4
AT2G43500.5
AT2G43500.6
AT2G43500.7
AT2G43500.2
AT2G43500.8
AT2G43500
Plant regulator RWP-RK family protein
Chr2_+_9841842 0.55 AT2G23120.1
AT2G23120
Late embryogenesis abundant protein, group 6
Chr3_+_188321 0.55 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
Chr3_-_21477620 0.54 AT3G58010.1
PGL34
plastoglobulin 34kD
Chr5_+_26664842 0.54 AT5G66790.1
AT5G66790
Protein kinase superfamily protein
Chr5_-_24083528 0.54 AT5G59780.2
AT5G59780.1
AT5G59780.3
MYB59
myb domain protein 59
Chr1_-_24176253 0.54 AT1G65070.1
AT1G65070.4
AT1G65070.2
AT1G65070.3
AT1G65070
DNA mismatch repair protein MutS, type 2
Chr5_+_23167774 0.54 AT5G57180.1
AT5G57180.2
AT5G57180.4
AT5G57180.3
CIA2
chloroplast import apparatus 2
Chr5_-_22429495 0.54 AT5G55300.3
AT5G55300.2
AT5G55300.1
TOP1ALPHA
DNA topoisomerase I alpha
Chr5_-_20164729 0.53 AT5G49660.1
XIP1
Leucine-rich repeat transmembrane protein kinase family protein
Chr4_+_7042354 0.53 AT4G11660.1
AT-HSFB2B
winged-helix DNA-binding transcription factor family protein
Chr1_+_18416474 0.53 AT1G49760.2
AT1G49760.1
PAB8
poly(A) binding protein 8
Chr1_+_22051295 0.53 AT1G59900.2
E1 ALPHA
pyruvate dehydrogenase complex E1 alpha subunit
Chr1_+_6886669 0.53 AT1G19850.1
MP
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
Chr4_-_13958107 0.53 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_5547753 0.53 AT1G16210.1
AT1G16210
coiled-coil protein
Chr3_-_2890520 0.53 AT3G09390.2
AT3G09390.1
MT2A
metallothionein 2A
Chr1_+_27190036 0.53 AT1G72240.1
AT1G72240
hypothetical protein
Chr5_+_653986 0.52 AT5G02860.3
AT5G02860.2
AT5G02860.4
AT5G02860.5
AT5G02860.1
AT5G02860
Pentatricopeptide repeat (PPR) superfamily protein
Chr5_-_6800903 0.52 AT5G20140.1
AT5G20140.2
HBP5
SOUL heme-binding family protein
Chr3_+_168408 0.52 AT3G01440.1
PnsL3
PsbQ-like 1
Chr2_-_2081858 0.52 AT2G05620.1
AT2G05620.2
PGR5
proton gradient regulation 5
Chr1_+_6886867 0.52 AT1G19850.2
MP
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
Chr1_-_11595982 0.52 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
Chr3_+_6313471 0.51 AT3G18390.1
EMB1865
CRS1 / YhbY (CRM) domain-containing protein
Chr1_+_3157501 0.51 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
Chr2_+_9530365 0.51 AT2G22450.1
RIBA2
riboflavin biosynthesis protein
Chr5_+_25200838 0.51 AT5G62740.1
HIR1
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr1_+_22051133 0.51 AT1G59900.1
E1 ALPHA
pyruvate dehydrogenase complex E1 alpha subunit
Chr1_+_2152798 0.51 AT1G07010.1
AT1G07010.2
AT1G07010.3
SLP1
Calcineurin-like metallo-phosphoesterase superfamily protein
Chr3_+_20578922 0.51 AT3G55510.1
AT3G55510.2
RBL
Noc2p family
Chr3_-_2175686 0.51 AT3G06880.1
AT3G06880.5
AT3G06880.4
AT3G06880.3
AT3G06880.2
AT3G06880
Transducin/WD40 repeat-like superfamily protein
Chr1_-_17706460 0.51 AT1G48000.1
MYB112
myb domain protein 112
Chr2_+_18145439 0.51 AT2G43800.1
AT2G43800
Actin-binding FH2 (formin homology 2) family protein
Chr2_+_15501726 0.51 AT2G36910.1
ABCB1
ATP binding cassette subfamily B1
Chr5_+_22388782 0.51 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr5_+_22388521 0.51 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr5_+_589199 0.50 AT5G02620.2
AT5G02620.3
AT5G02620.4
ANK1
ankyrin-like1
Chr3_+_20981316 0.50 AT3G56640.1
SEC15A
exocyst complex component sec15A
Chr2_+_7693596 0.50 AT2G17710.1
AT2G17710
Big1
Chr2_-_10831655 0.50 AT2G25450.1
AT2G25450
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_-_13860745 0.50 AT4G27820.1
AT4G27820.2
BGLU9
beta glucosidase 9
Chr3_-_21478187 0.49 AT3G58010.2
PGL34
plastoglobulin 34kD
Chr3_-_19991106 0.49 AT3G53990.2
AT3G53990.1
AT3G53990
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr3_+_16195848 0.49 AT3G44630.1
AT3G44630.4
AT3G44630.2
AT3G44630.3
AT3G44630
Disease resistance protein (TIR-NBS-LRR class) family
Chr5_-_14253434 0.49 AT5G36210.1
AT5G36210
alpha/beta-Hydrolases superfamily protein
Chr4_+_16931003 0.49 AT4G35730.1
AT4G35730
Regulator of Vps4 activity in the MVB pathway protein
Chr5_-_26845294 0.49 AT5G67280.1
RLK
receptor-like kinase
Chr1_+_7508701 0.49 AT1G21450.1
SCL1
SCARECROW-like 1
Chr3_+_3660298 0.49 AT3G11590.1
AT3G11590
golgin family A protein
Chr1_-_28279798 0.49 AT1G75370.2
AT1G75370
Sec14p-like phosphatidylinositol transfer family protein
Chr5_-_23466534 0.49 AT5G57960.2
AT5G57960.1
AT5G57960
GTP-binding protein, HflX
Chr2_+_18834011 0.49 AT2G45720.3
AT2G45720.2
AT2G45720.4
AT2G45720.5
AT2G45720
ARM repeat superfamily protein
Chr3_+_2201432 0.49 AT3G06980.1
AT3G06980
DEA(D/H)-box RNA helicase family protein
Chr1_-_638681 0.48 AT1G02870.1
AT1G02870
nucleolar-like protein
Chr5_-_18763503 0.48 AT5G46260.1
AT5G46260
disease resistance protein (TIR-NBS-LRR class) family
Chr5_+_21317130 0.48 AT5G52530.3
AT5G52530.2
AT5G52530.1
AT5G52530
dentin sialophosphoprotein-like protein
Chr1_-_28122577 0.48 AT1G74850.1
PTAC2
plastid transcriptionally active 2
Chr4_-_7992429 0.48 AT4G13770.1
CYP83A1
cytochrome P450, family 83, subfamily A, polypeptide 1
Chr5_+_26883663 0.48 AT5G67385.2
AT5G67385
Phototropic-responsive NPH3 family protein
Chr1_-_28280033 0.48 AT1G75370.1
AT1G75370
Sec14p-like phosphatidylinositol transfer family protein
Chr5_-_7956875 0.47 AT5G23590.1
AT5G23590
DNAJ heat shock N-terminal domain-containing protein
Chr2_+_7821585 0.47 AT2G17972.1
AT2G17972
transmembrane protein
Chr2_+_19104632 0.47 AT2G46530.1
AT2G46530.2
ARF11
auxin response factor 11
Chr3_-_21156075 0.47 AT3G57150.1
NAP57
homologue of NAP57
Chr2_+_8139756 0.47 AT2G18790.2
AT2G18790.1
PHYB
phytochrome B
Chr1_+_25756600 0.47 AT1G68585.1
AT1G68585
hypothetical protein
Chr3_-_3323272 0.47 AT3G10630.1
AT3G10630
UDP-Glycosyltransferase superfamily protein
Chr2_+_17507343 0.47 AT2G41940.1
ZFP8
zinc finger protein 8
Chr1_-_22756295 0.47 AT1G61660.2
AT1G61660.4
AT1G61660.3
AT1G61660.5
AT1G61660.6
AT1G61660.1
AT1G61660.7
AT1G61660
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_+_1428307 0.47 AT4G03260.3
AT4G03260.2
AT4G03260
Outer arm dynein light chain 1 protein
Chr5_-_17861150 0.47 AT5G44340.1
TUB4
tubulin beta chain 4
Chr1_+_23899994 0.47 AT1G64385.1
AT1G64385.2
AT1G64385
transmembrane protein
Chr1_-_130570 0.47 AT1G01320.1
AT1G01320.3
AT1G01320.2
AT1G01320
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_20667312 0.46 AT5G50800.1
SWEET13
Nodulin MtN3 family protein
Chr3_-_4340430 0.46 AT3G13360.1
AT3G13360.2
WIP3
WPP domain interacting protein 3
Chr2_-_11071287 0.46 AT2G25964.1
AT2G25964
hypothetical protein
Chr2_-_16856771 0.46 AT2G40360.2
AT2G40360.1
AT2G40360
Transducin/WD40 repeat-like superfamily protein
Chr4_-_7309895 0.46 AT4G12300.1
CYP706A4
cytochrome P450, family 706, subfamily A, polypeptide 4
Chr1_+_12066595 0.46 AT1G33265.1
AT1G33265
Transmembrane proteins 14C
Chr1_-_5098270 0.46 AT1G14790.1
RDR1
RNA-dependent RNA polymerase 1
Chr1_-_29005281 0.46 AT1G77200.1
AT1G77200
Integrase-type DNA-binding superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G38340

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 4.6 GO:0009413 response to flooding(GO:0009413)
0.4 1.3 GO:0010203 response to very low fluence red light stimulus(GO:0010203)
0.4 3.7 GO:0009819 drought recovery(GO:0009819)
0.3 1.0 GO:0015696 ammonium transport(GO:0015696)
0.2 0.5 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
0.2 1.3 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.2 1.0 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.2 6.0 GO:0006012 galactose metabolic process(GO:0006012)
0.2 1.1 GO:0043479 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.2 0.7 GO:0009584 detection of visible light(GO:0009584)
0.2 0.8 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.2 2.1 GO:0009608 response to symbiont(GO:0009608)
0.2 0.6 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.2 0.5 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.1 0.4 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.1 0.4 GO:0071258 cellular response to gravity(GO:0071258)
0.1 0.5 GO:0035865 cellular response to potassium ion(GO:0035865)
0.1 0.9 GO:0051647 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023) nucleus localization(GO:0051647)
0.1 0.5 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.1 0.5 GO:1904356 regulation of telomere maintenance via telomerase(GO:0032210) regulation of telomere maintenance via telomere lengthening(GO:1904356) negative regulation of DNA biosynthetic process(GO:2000279)
0.1 1.2 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 0.4 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.1 0.3 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.7 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.1 0.4 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.1 0.8 GO:0015800 acidic amino acid transport(GO:0015800)
0.1 0.5 GO:0010507 negative regulation of autophagy(GO:0010507)
0.1 1.2 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 0.3 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.1 0.8 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.1 0.3 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.1 1.1 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.4 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.1 0.6 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.1 0.9 GO:0070370 cellular heat acclimation(GO:0070370)
0.1 1.9 GO:0045338 farnesyl diphosphate metabolic process(GO:0045338)
0.1 0.4 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 0.4 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.1 0.4 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 0.6 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.1 3.4 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.1 0.3 GO:0043982 histone H4-K8 acetylation(GO:0043982)
0.1 1.0 GO:0030308 negative regulation of cell growth(GO:0030308)
0.1 0.2 GO:0051099 positive regulation of binding(GO:0051099)
0.1 0.1 GO:0061014 positive regulation of mRNA catabolic process(GO:0061014)
0.1 0.3 GO:0090547 guard mother cell differentiation(GO:0010444) response to low humidity(GO:0090547)
0.1 0.4 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 0.3 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.1 0.4 GO:0032309 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.1 0.3 GO:0071569 protein ufmylation(GO:0071569)
0.1 0.9 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1 0.4 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.1 1.5 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.1 0.5 GO:0006968 cellular defense response(GO:0006968)
0.1 1.0 GO:0045910 negative regulation of DNA recombination(GO:0045910)
0.1 0.5 GO:0060148 positive regulation of posttranscriptional gene silencing(GO:0060148)
0.1 0.2 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 0.7 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.1 0.4 GO:0009590 detection of gravity(GO:0009590)
0.1 0.7 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.1 0.3 GO:0000706 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.1 0.2 GO:0036115 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.1 0.2 GO:0080051 cutin transport(GO:0080051)
0.1 0.2 GO:0033258 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.1 0.5 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 0.3 GO:0051211 anisotropic cell growth(GO:0051211)
0.1 0.2 GO:0072526 pyridine-containing compound catabolic process(GO:0072526)
0.1 0.4 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.1 0.2 GO:0097056 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.1 0.2 GO:0000578 embryonic axis specification(GO:0000578)
0.1 0.9 GO:0009704 de-etiolation(GO:0009704)
0.1 0.6 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 2.9 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.1 0.8 GO:0006265 DNA topological change(GO:0006265)
0.1 0.2 GO:2000011 regulation of adaxial/abaxial pattern formation(GO:2000011)
0.1 0.2 GO:0032196 transposition(GO:0032196)
0.1 0.4 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.1 0.4 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.1 0.2 GO:0010325 raffinose family oligosaccharide biosynthetic process(GO:0010325)
0.1 0.2 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.1 0.2 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.1 0.3 GO:0010731 protein glutathionylation(GO:0010731)
0.1 0.6 GO:0010088 phloem development(GO:0010088)
0.1 0.6 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.1 0.5 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.1 1.8 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 0.3 GO:2000574 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.1 0.4 GO:1904481 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) glycine decarboxylation via glycine cleavage system(GO:0019464) folic acid metabolic process(GO:0046655) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.1 0.5 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 0.7 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.4 GO:0046900 tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.1 0.7 GO:0006771 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.1 0.3 GO:0015846 polyamine transport(GO:0015846)
0.1 0.5 GO:0010117 photoprotection(GO:0010117)
0.1 0.3 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 0.2 GO:0048479 style development(GO:0048479) stigma development(GO:0048480)
0.1 0.3 GO:0000912 assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) phragmoplast assembly(GO:0000914) phragmoplast microtubule organization(GO:0080175) assembly of actomyosin apparatus involved in mitotic cytokinesis(GO:1902407)
0.1 0.3 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.1 0.3 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.1 0.2 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 0.2 GO:0010447 response to acidic pH(GO:0010447)
0.0 0.9 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.2 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.0 1.1 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.6 GO:0050665 hydrogen peroxide biosynthetic process(GO:0050665)
0.0 0.2 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.0 1.6 GO:0010025 wax biosynthetic process(GO:0010025)
0.0 0.2 GO:0006527 arginine catabolic process(GO:0006527)
0.0 0.2 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.0 0.3 GO:0046865 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865)
0.0 0.5 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.7 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.5 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.0 0.6 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.0 0.3 GO:0006013 mannose metabolic process(GO:0006013)
0.0 0.3 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.3 GO:0043489 RNA stabilization(GO:0043489)
0.0 0.8 GO:0009583 detection of light stimulus(GO:0009583)
0.0 0.2 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.0 0.5 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.6 GO:0010540 basipetal auxin transport(GO:0010540)
0.0 0.2 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.0 0.4 GO:0010231 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.0 0.5 GO:0010555 response to mannitol(GO:0010555)
0.0 0.2 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.0 0.6 GO:0048766 root hair initiation(GO:0048766)
0.0 0.4 GO:0071324 cellular response to disaccharide stimulus(GO:0071324) cellular response to sucrose stimulus(GO:0071329)
0.0 0.5 GO:0006482 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.0 0.1 GO:0032979 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.0 1.9 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.0 0.3 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.0 0.3 GO:0009880 embryonic pattern specification(GO:0009880)
0.0 0.4 GO:0010205 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.0 0.4 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.0 1.1 GO:0042026 protein refolding(GO:0042026)
0.0 0.1 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.0 0.7 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.0 1.3 GO:0010286 heat acclimation(GO:0010286)
0.0 0.4 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.1 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.0 0.1 GO:0006517 protein deglycosylation(GO:0006517)
0.0 0.2 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 0.3 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 0.3 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.0 1.5 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 1.3 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.5 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0 0.2 GO:0033617 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.0 0.6 GO:0005983 starch catabolic process(GO:0005983)
0.0 0.3 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.2 GO:0007041 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.0 0.5 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0 0.3 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.1 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.0 0.2 GO:0010067 procambium histogenesis(GO:0010067)
0.0 0.4 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.1 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.0 0.3 GO:0034508 centromere complex assembly(GO:0034508)
0.0 0.6 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.6 GO:0061572 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.1 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.0 0.1 GO:0051016 negative regulation of actin filament depolymerization(GO:0030835) barbed-end actin filament capping(GO:0051016) actin filament capping(GO:0051693)
0.0 0.2 GO:0048209 regulation of vesicle targeting, to, from or within Golgi(GO:0048209)
0.0 0.1 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.0 0.8 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.6 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.3 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.0 0.1 GO:0009581 detection of external stimulus(GO:0009581) detection of abiotic stimulus(GO:0009582)
0.0 0.1 GO:0006777 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.0 1.0 GO:0009682 induced systemic resistance(GO:0009682)
0.0 0.9 GO:0035304 regulation of protein dephosphorylation(GO:0035304)
0.0 0.2 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.0 0.3 GO:0015718 monocarboxylic acid transport(GO:0015718)
0.0 0.2 GO:0070828 heterochromatin organization(GO:0070828)
0.0 0.1 GO:0006056 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506) response to cobalt ion(GO:0032025)
0.0 0.1 GO:0080009 mRNA methylation(GO:0080009)
0.0 0.1 GO:1900363 regulation of mRNA polyadenylation(GO:1900363)
0.0 0.4 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.4 GO:0050777 negative regulation of immune response(GO:0050777)
0.0 0.1 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0 0.1 GO:0051098 regulation of binding(GO:0051098)
0.0 0.4 GO:0006415 translational termination(GO:0006415)
0.0 0.2 GO:0009962 regulation of flavonoid biosynthetic process(GO:0009962)
0.0 0.3 GO:0006241 CTP biosynthetic process(GO:0006241) pyrimidine ribonucleoside triphosphate metabolic process(GO:0009208) pyrimidine ribonucleoside triphosphate biosynthetic process(GO:0009209) CTP metabolic process(GO:0046036)
0.0 0.1 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.0 0.2 GO:0009088 threonine biosynthetic process(GO:0009088)
0.0 0.1 GO:0071031 nuclear mRNA surveillance of mRNA 3'-end processing(GO:0071031) nuclear retention of pre-mRNA at the site of transcription(GO:0071033) CUT catabolic process(GO:0071034) CUT metabolic process(GO:0071043) nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription(GO:0071049)
0.0 0.2 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.3 GO:0071248 cellular response to metal ion(GO:0071248)
0.0 0.1 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.0 0.2 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.0 0.2 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.2 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.3 GO:0001709 cell fate determination(GO:0001709)
0.0 0.1 GO:0030259 lipid glycosylation(GO:0030259)
0.0 0.2 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 0.2 GO:0045842 positive regulation of mitotic nuclear division(GO:0045840) positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.0 0.3 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.0 0.4 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.7 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.6 GO:0009625 response to insect(GO:0009625)
0.0 0.1 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.4 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.2 GO:0010315 auxin efflux(GO:0010315)
0.0 0.1 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.0 0.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.8 GO:0048278 vesicle docking(GO:0048278)
0.0 0.3 GO:0006744 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 0.5 GO:0046283 anthocyanin-containing compound metabolic process(GO:0046283)
0.0 0.6 GO:0055088 lipid homeostasis(GO:0055088)
0.0 0.4 GO:0010091 trichome branching(GO:0010091)
0.0 0.3 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.5 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.0 0.4 GO:0009686 gibberellin biosynthetic process(GO:0009686)
0.0 0.1 GO:0009650 UV protection(GO:0009650)
0.0 0.1 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.0 0.2 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.0 0.1 GO:0006567 threonine catabolic process(GO:0006567)
0.0 0.1 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.5 GO:0006414 translational elongation(GO:0006414)
0.0 0.1 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.0 0.1 GO:0000187 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.0 0.2 GO:0031167 rRNA methylation(GO:0031167)
0.0 0.1 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.4 GO:0090332 stomatal closure(GO:0090332)
0.0 0.2 GO:0006835 dicarboxylic acid transport(GO:0006835)
0.0 2.5 GO:0042254 ribosome biogenesis(GO:0042254)
0.0 0.2 GO:0010229 inflorescence development(GO:0010229)
0.0 0.1 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.0 0.3 GO:0007030 Golgi organization(GO:0007030)
0.0 0.9 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.1 GO:0009554 megasporogenesis(GO:0009554)
0.0 0.3 GO:0043622 cortical microtubule organization(GO:0043622)
0.0 0.1 GO:0055075 potassium ion homeostasis(GO:0055075)
0.0 0.3 GO:0080022 primary root development(GO:0080022)
0.0 1.9 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.0 0.3 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.3 GO:0010212 response to ionizing radiation(GO:0010212)
0.0 0.1 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.4 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 0.1 GO:1900457 regulation of brassinosteroid mediated signaling pathway(GO:1900457)
0.0 3.6 GO:0006412 translation(GO:0006412)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.2 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.2 0.6 GO:0031897 Tic complex(GO:0031897)
0.2 0.5 GO:0030689 Noc complex(GO:0030689)
0.2 0.5 GO:0034457 Mpp10 complex(GO:0034457)
0.2 0.5 GO:0009501 amyloplast(GO:0009501)
0.1 0.3 GO:0044545 NSL complex(GO:0044545)
0.1 0.7 GO:0016363 nuclear matrix(GO:0016363)
0.1 0.5 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1 0.6 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.1 0.7 GO:0005884 actin filament(GO:0005884)
0.1 0.3 GO:0016328 lateral plasma membrane(GO:0016328)
0.1 0.6 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.1 0.4 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.1 1.8 GO:0009508 plastid chromosome(GO:0009508)
0.1 0.3 GO:0031353 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.1 0.5 GO:0055038 recycling endosome membrane(GO:0055038)
0.1 4.1 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 0.9 GO:0045298 tubulin complex(GO:0045298)
0.1 0.3 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.1 0.1 GO:0055037 recycling endosome(GO:0055037)
0.1 0.5 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.1 0.6 GO:0010445 nuclear dicing body(GO:0010445)
0.1 0.3 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1 0.2 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.1 1.5 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 0.5 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.1 0.3 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.3 GO:0030286 dynein complex(GO:0030286)
0.1 0.2 GO:0005656 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.1 0.5 GO:0017119 Golgi transport complex(GO:0017119)
0.1 0.3 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.0 0.4 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.0 3.0 GO:0031977 thylakoid lumen(GO:0031977)
0.0 0.5 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.2 GO:0010330 cellulose synthase complex(GO:0010330)
0.0 2.4 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.4 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.2 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.0 0.7 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.1 GO:1990298 bub1-bub3 complex(GO:1990298)
0.0 0.6 GO:0000786 nucleosome(GO:0000786)
0.0 0.3 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 0.5 GO:0000124 SAGA complex(GO:0000124)
0.0 0.3 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.1 GO:0000782 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.0 2.7 GO:0016604 nuclear body(GO:0016604)
0.0 0.3 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 0.2 GO:0044815 condensin complex(GO:0000796) DNA packaging complex(GO:0044815)
0.0 0.3 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.0 0.5 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 1.4 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.0 0.6 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.1 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.0 0.3 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.0 0.1 GO:0031298 replication fork protection complex(GO:0031298)
0.0 0.4 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.4 GO:0000178 exosome (RNase complex)(GO:0000178)
0.0 0.1 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.3 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 0.0 GO:0031902 late endosome membrane(GO:0031902)
0.0 0.1 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 2.8 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.2 GO:0009538 photosystem I reaction center(GO:0009538)
0.0 0.1 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.0 0.1 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.0 0.3 GO:0000776 kinetochore(GO:0000776)
0.0 0.3 GO:0032592 integral component of mitochondrial membrane(GO:0032592)
0.0 1.2 GO:0009524 phragmoplast(GO:0009524)
0.0 0.1 GO:0032153 cell division site(GO:0032153)
0.0 0.4 GO:0005762 organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.7 GO:0010319 stromule(GO:0010319)
0.0 0.4 GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain(GO:0033178)
0.0 0.4 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 5.3 GO:0005730 nucleolus(GO:0005730)
0.0 0.2 GO:0034399 nuclear periphery(GO:0034399)
0.0 0.5 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.2 GO:0030904 retromer complex(GO:0030904)
0.0 0.1 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 1.0 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.1 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 0.5 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.2 GO:0005769 early endosome(GO:0005769)
0.0 0.2 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.0 0.1 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.3 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.4 GO:0000145 exocyst(GO:0000145)
0.0 0.1 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.2 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.0 0.6 GO:0031201 SNARE complex(GO:0031201)
0.0 0.4 GO:0016592 mediator complex(GO:0016592)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 6.4 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.4 1.7 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.3 1.7 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.3 1.0 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.3 0.8 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.3 1.6 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.3 0.8 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.2 2.3 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.2 0.6 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.2 0.8 GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.2 1.5 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.2 0.7 GO:0003935 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.2 1.2 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.2 1.2 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.2 1.4 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.2 0.8 GO:0035197 siRNA binding(GO:0035197)
0.2 1.1 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.1 2.4 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.4 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.1 0.4 GO:0005078 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.1 0.6 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.3 GO:0070678 preprotein binding(GO:0070678)
0.1 0.7 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.1 3.3 GO:0048029 monosaccharide binding(GO:0048029)
0.1 1.6 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 1.3 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.1 0.5 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 0.3 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.3 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.1 0.5 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.1 1.1 GO:0002020 protease binding(GO:0002020)
0.1 0.3 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.1 0.4 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.1 0.2 GO:0010331 gibberellin binding(GO:0010331)
0.1 0.5 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 4.1 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 0.3 GO:0047517 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.1 0.5 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.1 0.3 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.1 0.4 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.1 0.2 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 0.9 GO:0051879 Hsp90 protein binding(GO:0051879)
0.1 0.6 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 0.4 GO:0004567 beta-mannosidase activity(GO:0004567)
0.1 2.5 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.1 0.2 GO:0008517 folic acid transporter activity(GO:0008517)
0.1 0.2 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.1 0.5 GO:0001653 peptide receptor activity(GO:0001653)
0.1 0.3 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.2 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.1 0.5 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.1 0.5 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266) phosphatidylinositol-3,5-bisphosphate binding(GO:0080025)
0.1 0.2 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.1 0.3 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.1 0.3 GO:0019156 isoamylase activity(GO:0019156)
0.1 0.6 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.1 0.3 GO:0030371 translation repressor activity(GO:0030371)
0.1 0.2 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.1 0.4 GO:0051087 chaperone binding(GO:0051087)
0.1 0.2 GO:0043546 molybdopterin cofactor binding(GO:0043546)
0.1 0.4 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 0.3 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.1 0.4 GO:0019825 oxygen binding(GO:0019825)
0.1 0.3 GO:0045505 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.1 0.2 GO:0004623 phospholipase A2 activity(GO:0004623)
0.1 0.4 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.6 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.1 0.2 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.1 0.2 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.1 0.3 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.1 0.3 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 0.9 GO:0036002 pre-mRNA binding(GO:0036002)
0.1 0.3 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 1.2 GO:0008143 poly(A) binding(GO:0008143)
0.0 3.2 GO:0043621 protein self-association(GO:0043621)
0.0 0.7 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 2.0 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.8 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.3 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.9 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.3 GO:0032036 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.0 0.5 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.3 GO:0050302 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.0 0.1 GO:0010242 oxygen evolving activity(GO:0010242)
0.0 1.6 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.3 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.2 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.0 0.2 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.0 0.9 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.0 0.1 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.0 0.1 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.0 0.2 GO:0042879 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.0 0.1 GO:0017070 U6 snRNA binding(GO:0017070)
0.0 0.3 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.0 0.7 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.3 GO:0035198 miRNA binding(GO:0035198)
0.0 0.2 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.1 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.0 0.2 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.2 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 0.1 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.3 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.1 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 0.1 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 0.5 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.1 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.0 0.1 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.0 0.3 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.0 0.5 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.4 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.0 0.2 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 0.2 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.0 0.2 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.4 GO:0019210 kinase inhibitor activity(GO:0019210)
0.0 0.1 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 0.6 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.2 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 0.1 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.0 0.4 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.1 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.0 0.3 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 2.2 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.3 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.0 0.0 GO:0008144 drug binding(GO:0008144)
0.0 0.2 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.5 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.1 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.0 0.1 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.0 0.1 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.0 0.3 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 0.3 GO:0005267 potassium channel activity(GO:0005267)
0.0 1.1 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.1 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.0 0.4 GO:0051787 misfolded protein binding(GO:0051787)
0.0 1.0 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.1 GO:0004424 imidazoleglycerol-phosphate dehydratase activity(GO:0004424)
0.0 1.5 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.1 GO:0052743 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.0 0.1 GO:0047780 citrate dehydratase activity(GO:0047780)
0.0 0.2 GO:0019202 amino acid kinase activity(GO:0019202)
0.0 0.1 GO:0045430 chalcone isomerase activity(GO:0045430)
0.0 0.1 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 0.2 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
0.0 0.3 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.1 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.2 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 0.4 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.3 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.3 GO:0061608 nuclear localization sequence binding(GO:0008139) nuclear import signal receptor activity(GO:0061608)
0.0 0.2 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.7 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.2 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.3 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.3 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.0 0.2 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.0 0.2 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.2 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.2 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.2 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 2.1 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.9 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.3 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 1.2 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.2 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.0 0.6 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.4 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.1 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.1 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.1 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.3 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.3 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.4 GO:0000049 tRNA binding(GO:0000049)
0.0 0.2 GO:0004673 protein histidine kinase activity(GO:0004673) phosphotransferase activity, nitrogenous group as acceptor(GO:0016775)
0.0 0.3 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.1 GO:0016841 ammonia-lyase activity(GO:0016841)
0.0 0.9 GO:0004843 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.0 3.6 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.1 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.1 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.0 0.6 GO:0005319 lipid transporter activity(GO:0005319)
0.0 0.3 GO:0042162 telomeric DNA binding(GO:0042162)
0.0 0.6 GO:0008094 DNA-dependent ATPase activity(GO:0008094)
0.0 0.1 GO:0017136 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.6 GO:0043021 ribonucleoprotein complex binding(GO:0043021)
0.0 0.2 GO:0015114 inositol hexakisphosphate binding(GO:0000822) phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.1 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.0 0.1 GO:0004001 adenosine kinase activity(GO:0004001)
0.0 0.1 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.2 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.1 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.1 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.1 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.2 GO:0008146 sulfotransferase activity(GO:0008146)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.3 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.1 0.2 ST G ALPHA I PATHWAY G alpha i Pathway
0.1 0.5 ST DIFFERENTIATION PATHWAY IN PC12 CELLS Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway.
0.1 0.5 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.1 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.0 0.1 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.0 0.0 PID UPA UPAR PATHWAY Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling
0.0 0.1 PID ATR PATHWAY ATR signaling pathway
0.0 0.1 PID RAC1 PATHWAY RAC1 signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.7 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.2 0.5 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 0.5 REACTOME DOWNSTREAM SIGNALING OF ACTIVATED FGFR Genes involved in Downstream signaling of activated FGFR
0.1 0.7 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
0.1 0.7 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 0.2 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.1 0.6 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.1 0.3 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.1 0.6 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.1 0.5 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.0 0.1 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.0 0.1 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.0 0.2 REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION Genes involved in Platelet activation, signaling and aggregation
0.0 0.1 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.0 0.1 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.0 0.6 REACTOME INFLUENZA LIFE CYCLE Genes involved in Influenza Life Cycle
0.0 0.1 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.0 0.2 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis