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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G04038

Z-value: 1.00

Transcription factors associated with AT2G04038

Gene Symbol Gene ID Gene Info
AT2G04038
AT2G04038 basic leucine-zipper 48

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
bZIP48arTal_v1_Chr2_+_1331919_1331919-0.185.3e-01Click!

Activity profile of AT2G04038 motif

Sorted Z-values of AT2G04038 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_+_6833564 2.18 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
Chr5_+_16441808 1.89 AT5G41080.2
GDPD2
PLC-like phosphodiesterases superfamily protein
Chr5_+_16441655 1.87 AT5G41080.1
GDPD2
PLC-like phosphodiesterases superfamily protein
Chr1_+_739544 1.27 AT1G03090.2
AT1G03090.1
MCCA
methylcrotonyl-CoA carboxylase alpha chain
Chr2_-_7768040 1.26 AT2G17880.1
AT2G17880
Chaperone DnaJ-domain superfamily protein
Chr1_+_30241452 1.20 AT1G80440.1
AT1G80440
Galactose oxidase/kelch repeat superfamily protein
Chr3_-_2130451 1.12 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr4_-_9754161 1.08 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
Chr5_-_5358789 1.08 AT5G16370.1
AAE5
acyl activating enzyme 5
Chr1_+_28746833 1.05 AT1G76600.1
AT1G76600
poly polymerase
Chr2_+_11041331 0.96 AT2G25900.2
AT2G25900.1
ATCTH
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr2_+_16049918 0.92 AT2G38310.1
PYL4
PYR1-like 4
Chr4_-_14009287 0.90 AT4G28270.1
RMA2
RING membrane-anchor 2
Chr5_+_9683988 0.88 AT5G27420.1
CNI1
carbon/nitrogen insensitive 1
Chr5_-_5351095 0.81 AT5G16340.1
AT5G16340
AMP-dependent synthetase and ligase family protein
Chr4_+_17524461 0.81 AT4G37240.1
AT4G37240
HTH-type transcriptional regulator
Chr5_+_84474 0.79 AT5G01210.1
AT5G01210
HXXXD-type acyl-transferase family protein
Chr1_+_564018 0.77 AT1G02640.1
BXL2
beta-xylosidase 2
Chr1_+_5290582 0.76 AT1G15380.1
GLYI4
Lactoylglutathione lyase / glyoxalase I family protein
Chr1_+_5290747 0.76 AT1G15380.2
GLYI4
Lactoylglutathione lyase / glyoxalase I family protein
Chr5_-_16236 0.76 AT5G01040.1
LAC8
laccase 8
Chr1_-_7469995 0.76 AT1G21326.1
AT1G21326
VQ motif-containing protein
Chr4_-_11623797 0.75 AT4G21903.2
AT4G21903.1
AT4G21903
MATE efflux family protein
Chr2_+_8108898 0.73 AT2G18700.1
TPS11
trehalose phosphatase/synthase 11
Chr5_-_17331646 0.68 AT5G43170.1
ZF3
zinc-finger protein 3
Chr1_+_25426234 0.67 AT1G67810.1
SUFE2
sulfur E2
Chr3_-_3091766 0.67 AT3G10020.2
AT3G10020
plant/protein
Chr5_-_26810116 0.65 AT5G67190.1
DEAR2
DREB and EAR motif protein 2
Chr1_+_27402814 0.64 AT1G72820.1
AT1G72820.2
AT1G72820
Mitochondrial substrate carrier family protein
Chr2_-_16846194 0.64 AT2G40330.1
PYL6
PYR1-like 6
Chr5_-_23768111 0.63 AT5G58860.1
CYP86A1
cytochrome P450, family 86, subfamily A, polypeptide 1
Chr3_-_3091922 0.62 AT3G10020.1
AT3G10020
plant/protein
Chr4_+_14566183 0.61 AT4G29740.3
AT4G29740.2
AT4G29740.1
CKX4
cytokinin oxidase 4
Chr1_+_954290 0.58 AT1G03790.1
SOM
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr4_+_13653579 0.58 AT4G27260.1
WES1
Auxin-responsive GH3 family protein
Chr4_-_11624459 0.56 AT4G21903.3
AT4G21903
MATE efflux family protein
Chr5_-_17758275 0.56 AT5G44120.2
AT5G44120.1
AT5G44120.3
CRA1
RmlC-like cupins superfamily protein
Chr4_+_12686459 0.56 AT4G24570.1
DIC2
dicarboxylate carrier 2
Chr1_+_5389952 0.55 AT1G15670.1
AT1G15670
Galactose oxidase/kelch repeat superfamily protein
Chr1_+_30370474 0.55 AT1G80820.1
AT1G80820.2
CCR2
cinnamoyl coa reductase
Chr4_+_17346805 0.55 AT4G36820.1
AT4G36820
calcium uniporter (DUF607)
Chr4_+_14087556 0.55 AT4G28520.1
AT4G28520.2
AT4G28520.4
AT4G28520.5
AT4G28520.3
CRU3
cruciferin 3
Chr3_-_4311629 0.54 AT3G13310.1
AT3G13310
Chaperone DnaJ-domain superfamily protein
Chr4_+_18406627 0.53 AT4G39660.1
AT4G39660.2
AGT2
alanine:glyoxylate aminotransferase 2
Chr2_-_761013 0.53 AT2G02710.2
AT2G02710.3
AT2G02710.4
AT2G02710.1
PLPB
PAS/LOV protein B
Chr2_+_3618058 0.53 AT2G08986.1
AT2G08986
hypothetical protein
Chr5_+_22551734 0.52 AT5G55700.1
AT5G55700.2
BAM4
beta-amylase 4
Chr5_+_1461786 0.51 AT5G04960.1
AT5G04960
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_+_11155453 0.49 AT4G20830.1
AT4G20830.2
AT4G20830
FAD-binding Berberine family protein
Chr1_+_22628264 0.48 AT1G61340.1
AT1G61340.2
FBS1
F-box family protein
Chr1_-_3272110 0.48 AT1G10020.1
AT1G10020
formin-like protein (DUF1005)
Chr3_+_22602816 0.48 AT3G61060.1
AT3G61060.2
PP2-A13
phloem protein 2-A13
Chr2_+_18021109 0.48 AT2G43400.1
AT2G43400.2
ETFQO
electron-transfer flavoprotein:ubiquinone oxidoreductase
Chr4_-_3950602 0.48 AT4G06700.1
AT4G06700

Chr5_-_18536316 0.48 AT5G45690.1
AT5G45690
histone acetyltransferase (DUF1264)
Chr1_+_7886323 0.48 AT1G22330.1
AT1G22330
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr5_-_19299174 0.46 AT5G47590.1
AT5G47590.2
AT5G47590
Heat shock protein HSP20/alpha crystallin family
Chr3_+_8997370 0.46 AT3G24650.1
ABI3
AP2/B3-like transcriptional factor family protein
Chr1_-_26324946 0.46 AT1G69890.1
AT1G69890
actin cross-linking protein (DUF569)
Chr5_-_23992908 0.46 AT5G59520.1
ZIP2
ZRT/IRT-like protein 2
Chr5_+_21945865 0.45 AT5G54080.1
AT5G54080.2
HGO
homogentisate 1,2-dioxygenase
Chr3_-_20606650 0.44 AT3G55560.1
AGF2
AT-hook protein of GA feedback 2
Chr5_+_18524889 0.44 AT5G45660.1
AT5G45660
adenine phosphoribosyltransferase
Chr2_+_18624264 0.42 AT2G45170.1
AT2G45170.2
ATG8E
AUTOPHAGY 8E
Chr4_+_8634508 0.42 AT4G15120.1
AT4G15120
VQ motif-containing protein
Chr1_-_1416218 0.42 AT1G04980.1
PDIL2-2
PDI-like 2-2
Chr4_-_12520898 0.41 AT4G24110.1
AT4G24110
NADP-specific glutamate dehydrogenase
Chr1_-_4025113 0.41 AT1G11920.1
AT1G11920
Pectin lyase-like superfamily protein
Chr1_+_6294160 0.41 AT1G18280.1
AT1G18280
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_-_15277505 0.41 AT4G31510.1
AT4G31510
major centromere autoantigen B-like protein
Chr3_-_6931825 0.40 AT3G19920.2
AT3G19920.1
AT3G19920
BTB/POZ domain protein
Chr3_-_6491429 0.40 AT3G18830.1
PMT5
polyol/monosaccharide transporter 5
Chr1_+_24637196 0.40 AT1G66160.2
AT1G66160.1
CMPG1
CYS, MET, PRO, and GLY protein 1
Chr4_+_17579618 0.39 AT4G37390.1
BRU6
Auxin-responsive GH3 family protein
Chr5_+_26298728 0.39 AT5G65730.1
XTH6
xyloglucan endotransglucosylase/hydrolase 6
Chr5_+_6225956 0.39 AT5G18670.1
BMY3
beta-amylase 3
Chr4_+_17263564 0.38 AT4G36600.2
AT4G36600.1
AT4G36600
Late embryogenesis abundant (LEA) protein
Chr5_-_26096114 0.38 AT5G65300.1
AT5G65300
hypothetical protein
Chr5_+_8028238 0.38 AT5G23810.5
AT5G23810.3
AT5G23810.4
AT5G23810.1
AT5G23810.2
AAP7
amino acid permease 7
Chr1_+_852151 0.37 AT1G03440.1
AT1G03440
Leucine-rich repeat (LRR) family protein
Chr2_+_19469571 0.37 AT2G47440.2
AT2G47440.1
AT2G47440
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr4_+_18324457 0.37 AT4G39400.1
BRI1
Leucine-rich receptor-like protein kinase family protein
Chr4_+_160643 0.37 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr1_-_28383769 0.37 AT1G75590.1
AT1G75590
SAUR-like auxin-responsive protein family
Chr3_-_4735993 0.36 AT3G14225.2
AT3G14225.1
GLIP4
GDSL-motif lipase 4
Chr2_+_385171 0.36 AT2G01850.1
EXGT-A3
endoxyloglucan transferase A3
Chr3_-_3003454 0.36 AT3G09780.1
CCR1
CRINKLY4 related 1
Chr3_+_4988008 0.36 AT3G14840.2
AT3G14840.1
AT3G14840
Leucine-rich repeat transmembrane protein kinase
Chr1_+_23128651 0.36 AT1G62480.1
AT1G62480
Vacuolar calcium-binding protein-like protein
Chr5_+_24386010 0.36 AT5G60680.1
AT5G60680
transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
Chr3_+_19474945 0.35 AT3G52525.1
OFP6
ovate family protein 6
Chr3_+_17115483 0.35 AT3G46490.1
AT3G46490.2
AT3G46490
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_+_4898641 0.35 AT5G15120.1
AT5G15120
2-aminoethanethiol dioxygenase, putative (DUF1637)
Chr5_-_13940867 0.34 AT5G35770.1
SAP
Transducin/WD40 repeat-like superfamily protein
Chr1_-_1029119 0.34 AT1G04000.1
AT1G04000
hypothetical protein
Chr3_-_15953346 0.34 AT3G44260.1
CAF1a
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr4_-_14627631 0.34 AT4G29905.1
AT4G29905
hypothetical protein
Chr2_-_3312651 0.33 AT2G07687.1
AT2G07687
Cytochrome c oxidase, subunit III
Chr3_+_16271511 0.33 AT3G44720.1
ADT4
arogenate dehydratase 4
Chr2_-_1143988 0.33 AT2G03740.1
AT2G03740
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
Chr2_+_15192480 0.33 AT2G36220.1
AT2G36220
hypothetical protein
Chr5_+_11615250 0.33 AT5G30500.2
AT5G30500.1
GolS10
Nucleotide-diphospho-sugar transferases superfamily protein
Chr2_-_11685342 0.32 AT2G27310.1
AT2G27310
F-box family protein
Chr5_-_4183354 0.32 AT5G13170.1
SAG29
senescence-associated gene 29
Chr3_+_19975339 0.32 AT3G53950.1
AT3G53950
glyoxal oxidase-related protein
Chr3_-_19805663 0.32 AT3G53420.2
AT3G53420.1
PIP2A
plasma membrane intrinsic protein 2A
Chr1_+_26157702 0.32 AT1G69560.2
AT1G69560.1
MYB105
myb domain protein 105
Chr2_+_19375985 0.31 AT2G47190.1
MYB2
myb domain protein 2
Chr5_-_3771416 0.31 AT5G11700.1
AT5G11700.2
AT5G11700
ephrin type-B receptor
Chr5_-_5367612 0.31 AT5G16410.1
AT5G16410
HXXXD-type acyl-transferase family protein
Chr2_-_16852068 0.31 AT2G40350.1
AT2G40350
Integrase-type DNA-binding superfamily protein
Chr5_+_22808641 0.31 AT5G56320.2
AT5G56320.1
AT5G56320.3
EXPA14
expansin A14
Chr1_+_21042951 0.31 AT1G56220.4
AT1G56220.5
AT1G56220.3
AT1G56220
Dormancy/auxin associated family protein
Chr5_-_8186662 0.30 AT5G24160.2
AT5G24160.1
SQE6
squalene monooxygenase 6
Chr3_+_6187267 0.30 AT3G18070.3
AT3G18070.1
AT3G18070.4
AT3G18070.5
AT3G18070.2
BGLU43
beta glucosidase 43
Chr4_-_13069762 0.30 AT4G25620.1
AT4G25620
hydroxyproline-rich glycoprotein family protein
Chr5_+_7243002 0.30 AT5G21930.3
AT5G21930.1
AT5G21930.4
AT5G21930.2
PAA2
P-type ATPase of Arabidopsis 2
Chr2_+_11380463 0.30 AT2G26710.1
BAS1
Cytochrome P450 superfamily protein
Chr5_+_2112716 0.30 AT5G06820.1
SRF2
STRUBBELIG-receptor family 2
Chr1_+_21043348 0.30 AT1G56220.2
AT1G56220.1
AT1G56220
Dormancy/auxin associated family protein
Chr1_-_4588661 0.30 AT1G13370.1
AT1G13370
Histone superfamily protein
Chr3_+_22804998 0.29 AT3G61630.1
CRF6
cytokinin response factor 6
Chr4_+_17858351 0.29 AT4G38000.1
DOF4.7
DNA binding with one finger 4.7
Chr2_-_10122479 0.29 AT2G23770.1
LYK4
protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
Chr3_-_2048553 0.29 AT3G06570.1
AT3G06570
Galactose oxidase/kelch repeat superfamily protein
Chr5_+_17496855 0.28 AT5G43540.1
AT5G43540
C2H2 and C2HC zinc fingers superfamily protein
Chr5_-_8186100 0.28 AT5G24160.3
SQE6
squalene monooxygenase 6
Chr3_-_18559326 0.28 AT3G50060.1
MYB77
myb domain protein 77
Chr2_-_16690182 0.28 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
Chr4_-_8429667 0.28 AT4G14713.2
AT4G14713.4
AT4G14713.3
AT4G14713.1
AT4G14713.5
PPD1
TIFY domain/Divergent CCT motif family protein
Chr5_-_6363682 0.27 AT5G19040.2
AT5G19040.1
IPT5
isopentenyltransferase 5
Chr1_-_5068677 0.27 AT1G14720.1
XTH28
xyloglucan endotransglucosylase/hydrolase 28
Chr2_+_18479053 0.27 AT2G44810.1
DAD1
alpha/beta-Hydrolases superfamily protein
Chr3_+_1983731 0.26 AT3G06470.1
AT3G06470
GNS1/SUR4 membrane protein family
Chr2_+_17728479 0.26 AT2G42580.1
TTL3
tetratricopetide-repeat thioredoxin-like 3
Chr5_+_19312747 0.26 AT5G47660.1
AT5G47660
Homeodomain-like superfamily protein
Chr4_+_9467512 0.26 AT4G16820.1
PLA-I%7Bbeta]2
alpha/beta-Hydrolases superfamily protein
Chr5_-_2950695 0.25 AT5G09470.1
DIC3
dicarboxylate carrier 3
Chr1_+_985751 0.25 AT1G03880.1
CRU2
cruciferin 2
Chr5_-_5860041 0.25 AT5G17750.1
AT5G17750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_-_1495214 0.25 AT4G03390.1
AT4G03390.2
SRF3
STRUBBELIG-receptor family 3
Chr2_-_12454356 0.25 AT2G28980.1
AT2G28980

Chr3_-_2306615 0.25 AT3G07250.1
AT3G07250
RNA-binding (RRM-RBD-RNP motif) domain nuclear transport factor 2 family protein
Chr2_-_13307572 0.25 AT2G31230.1
ERF15
ethylene-responsive element binding factor 15
Chr2_-_2040701 0.25 AT2G05550.1
AT2G05550

Chr5_-_26414528 0.25 AT5G66050.2
AT5G66050.4
AT5G66050.3
AT5G66050.1
AT5G66050
Wound-responsive family protein
Chr2_+_12103672 0.25 AT2G28340.1
GATA13
GATA transcription factor 13
Chr2_-_11206287 0.25 AT2G26320.1
AGL33
AGAMOUS-like 33
Chr3_+_488780 0.25 AT3G02390.1
AT3G02390.2
AT3G02390
hypothetical protein
Chr1_-_23368369 0.24 AT1G63030.2
AT1G63030.1
ddf2
Integrase-type DNA-binding superfamily protein
Chr1_-_3481041 0.24 AT1G10550.1
XTH33
xyloglucan:xyloglucosyl transferase 33
Chr3_-_20086967 0.24 AT3G54260.1
TBL36
TRICHOME BIREFRINGENCE-LIKE 36
Chr2_-_8829497 0.24 AT2G20470.3
AT2G20470.2
AT2G20470
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Chr2_+_19008175 0.24 AT2G46300.1
AT2G46300
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr5_+_20900859 0.24 AT5G51460.1
AT5G51460.4
ATTPPA
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr3_-_89593 0.24 AT3G01290.1
HIR2
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr2_+_18478374 0.24 AT2G44810.2
DAD1
alpha/beta-Hydrolases superfamily protein
Chr5_+_619865 0.24 AT5G02750.1
SGR9
RING/U-box superfamily protein
Chr1_+_618061 0.24 AT1G02810.1
AT1G02810
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_-_19222916 0.23 AT2G46770.1
NST1
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr2_-_8829771 0.23 AT2G20470.1
AT2G20470
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Chr1_+_11925320 0.23 AT1G32910.1
AT1G32910
HXXXD-type acyl-transferase family protein
Chr5_-_24096532 0.23 AT5G59800.1
MBD7
methyl-CPG-binding domain 7
Chr3_-_15837126 0.23 AT3G44080.1
AT3G44080
F-box family protein
Chr5_-_10798235 0.23 AT5G28770.4
AT5G28770.1
AT5G28770.3
AT5G28770.2
BZO2H3
bZIP transcription factor family protein
Chr3_-_302277 0.23 AT3G01850.1
AT3G01850.2
AT3G01850
Aldolase-type TIM barrel family protein
Chr2_-_16852803 0.23 AT2G40350.2
AT2G40350
Integrase-type DNA-binding superfamily protein
Chr1_+_12660497 0.23 AT1G34580.1
AT1G34580.2
AT1G34580
Major facilitator superfamily protein
Chr4_-_1174321 0.23 AT4G02660.2
AT4G02660.1
AT4G02660.3
AT4G02660
Beige/BEACH and WD40 domain-containing protein
Chr2_-_6453797 0.23 AT2G14960.1
GH3.1
Auxin-responsive GH3 family protein
Chr5_+_19179881 0.23 AT5G47230.1
ERF5
ethylene responsive element binding factor 5
Chr1_+_10974383 0.23 AT1G30840.1
AT1G30840.2
PUP4
purine permease 4
Chr2_-_10346829 0.22 AT2G24320.1
AT2G24320
alpha/beta-Hydrolases superfamily protein
Chr1_-_2366609 0.22 AT1G07650.3
AT1G07650.2
AT1G07650.1
AT1G07650
Leucine-rich repeat transmembrane protein kinase
Chr1_+_26329863 0.22 AT1G69910.1
AT1G69910
Protein kinase superfamily protein
Chr2_-_16680489 0.22 AT2G39950.2
AT2G39950.5
AT2G39950.4
AT2G39950.6
AT2G39950.9
AT2G39950.3
AT2G39950.7
AT2G39950.1
AT2G39950
flocculation protein
Chr1_+_4934120 0.22 AT1G14430.1
AT1G14430
glyoxal oxidase-related protein
Chr1_-_3764483 0.22 AT1G11230.2
AT1G11230.1
AT1G11230
transmembrane protein, putative (DUF761)
Chr2_+_11697960 0.22 AT2G27340.1
AT2G27340
N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein
Chr1_-_84864 0.22 AT1G01190.1
AT1G01190.2
CYP78A8
cytochrome P450, family 78, subfamily A, polypeptide 8
Chr1_+_51953 0.22 AT1G01110.2
AT1G01110.1
IQD18
IQ-domain 18
Chr3_+_6188132 0.22 AT3G18070.7
AT3G18070.6
BGLU43
beta glucosidase 43
Chr2_-_16679425 0.22 AT2G39950.8
AT2G39950
flocculation protein
Chr3_-_22930456 0.21 AT3G61910.1
NAC066
NAC domain protein 66
Chr2_-_6711156 0.21 AT2G15390.2
FUT4
fucosyltransferase 4
Chr1_-_11919845 0.21 AT1G32890.1
AT1G32890

Chr4_+_15875342 0.21 AT4G32890.1
GATA9
GATA transcription factor 9
Chr2_-_12634120 0.21 AT2G29500.1
AT2G29500
HSP20-like chaperones superfamily protein
Chr2_-_5384531 0.21 AT2G13080.1
AT2G13080

Chr1_+_25558794 0.21 AT1G68190.2
AT1G68190.3
BBX27
B-box zinc finger family protein
Chr4_+_13210230 0.21 AT4G26050.1
PIRL8
plant intracellular ras group-related LRR 8
Chr3_-_7231194 0.21 AT3G20680.1
AT3G20680
plant/protein (DUF1995)
Chr4_+_1415953 0.21 AT4G03210.2
XTH9
xyloglucan endotransglucosylase/hydrolase 9
Chr1_-_2195798 0.21 AT1G07150.2
MAPKKK13
mitogen-activated protein kinase kinase kinase 13
Chr5_-_6313372 0.21 AT5G18930.1
BUD2
Adenosylmethionine decarboxylase family protein
Chr2_-_10347053 0.21 AT2G24320.2
AT2G24320
alpha/beta-Hydrolases superfamily protein
Chr1_-_11200141 0.20 AT1G31310.1
AT1G31310
hydroxyproline-rich glycoprotein family protein
Chr3_+_6296677 0.20 AT3G18350.2
AT3G18350.3
AT3G18350.1
AT3G18350
heat-inducible transcription repressor (DUF639)
Chr1_+_9270952 0.20 AT1G26780.2
AT1G26780.1
MYB117
myb domain protein 117
Chr2_+_10822192 0.20 AT2G25430.1
AT2G25430
epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G04038

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 3.7 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.3 0.8 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.2 1.7 GO:0006552 leucine catabolic process(GO:0006552)
0.2 1.3 GO:0051176 positive regulation of sulfur metabolic process(GO:0051176)
0.2 1.6 GO:0009061 anaerobic respiration(GO:0009061)
0.2 0.5 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.2 0.5 GO:1902000 homogentisate metabolic process(GO:1901999) homogentisate catabolic process(GO:1902000)
0.1 0.8 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 1.6 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 0.8 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.4 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.3 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 0.2 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.1 0.9 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.1 0.4 GO:0019323 pentose catabolic process(GO:0019323)
0.1 0.2 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.1 0.3 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 0.7 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.1 0.2 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.1 0.2 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.1 0.3 GO:0071323 cellular response to chitin(GO:0071323)
0.1 0.2 GO:0010028 xanthophyll cycle(GO:0010028)
0.1 1.0 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.1 0.2 GO:1902586 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.1 0.5 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.0 1.6 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 1.5 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.0 0.3 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.0 0.5 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.0 1.0 GO:0009901 anther dehiscence(GO:0009901)
0.0 0.3 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.1 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.0 0.8 GO:0046688 response to copper ion(GO:0046688)
0.0 0.1 GO:1900034 regulation of cellular response to heat(GO:1900034)
0.0 3.8 GO:0010200 response to chitin(GO:0010200)
0.0 0.3 GO:0006825 copper ion transport(GO:0006825)
0.0 0.3 GO:0080086 stamen filament development(GO:0080086)
0.0 0.5 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.3 GO:0042374 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.0 0.3 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.2 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.6 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.6 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.3 GO:0015770 sucrose transport(GO:0015770)
0.0 0.2 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.0 0.8 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.5 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.1 GO:0010226 response to lithium ion(GO:0010226)
0.0 0.8 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.5 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.1 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.0 0.3 GO:0048564 photosystem I assembly(GO:0048564)
0.0 0.6 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.5 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.1 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.0 0.1 GO:0050810 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.0 1.3 GO:0010431 seed maturation(GO:0010431)
0.0 3.1 GO:0071456 cellular response to hypoxia(GO:0071456)
0.0 0.1 GO:0052126 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.1 GO:0046512 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.0 0.2 GO:0009098 leucine biosynthetic process(GO:0009098)
0.0 0.2 GO:0030497 fatty acid elongation(GO:0030497)
0.0 0.2 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 0.3 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.0 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.0 0.4 GO:0010252 auxin homeostasis(GO:0010252)
0.0 0.0 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.0 0.1 GO:0006513 protein monoubiquitination(GO:0006513)
0.0 0.4 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.0 0.3 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.3 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.1 0.2 GO:0009501 amyloplast(GO:0009501)
0.1 0.4 GO:0005776 autophagosome(GO:0005776)
0.0 0.3 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.0 0.5 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.2 GO:0010369 chromocenter(GO:0010369)
0.0 0.1 GO:1990429 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.0 0.3 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.2 GO:0000124 SAGA complex(GO:0000124)
0.0 0.2 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.1 GO:0034991 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.2 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.3 0.8 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.3 3.7 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 1.0 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.1 0.4 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.1 0.9 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 1.3 GO:0016885 CoA carboxylase activity(GO:0016421) ligase activity, forming carbon-carbon bonds(GO:0016885)
0.1 0.5 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.1 0.5 GO:0004174 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.1 0.4 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.1 0.8 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 0.3 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.1 0.2 GO:0052736 beta-glucanase activity(GO:0052736)
0.1 0.3 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 1.6 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.1 0.6 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 0.3 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.1 0.2 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.1 0.3 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 0.5 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.1 1.6 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.3 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 0.8 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 0.2 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.1 0.5 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 0.6 GO:0016161 beta-amylase activity(GO:0016161)
0.1 0.3 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.2 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.0 1.7 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.5 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.0 0.1 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.0 0.5 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 0.1 GO:0008481 sphinganine kinase activity(GO:0008481)
0.0 0.2 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.0 0.3 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.0 0.2 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.0 0.1 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.0 1.4 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.3 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.1 GO:0005046 KDEL sequence binding(GO:0005046)
0.0 0.6 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.4 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 0.5 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.9 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.0 0.3 GO:0008061 chitin binding(GO:0008061)
0.0 0.2 GO:0009922 fatty acid elongase activity(GO:0009922)
0.0 0.2 GO:0008083 growth factor activity(GO:0008083)
0.0 0.2 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.5 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.0 0.3 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.2 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
0.0 0.4 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 1.2 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 0.2 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.6 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.0 0.2 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.0 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.0 0.1 GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.0 0.1 GO:0004337 geranyltranstransferase activity(GO:0004337)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 PID IL12 2PATHWAY IL12-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.9 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.5 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.1 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.0 0.2 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.0 0.1 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.0 0.1 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle