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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G03500

Z-value: 0.96

Transcription factors associated with AT2G03500

Gene Symbol Gene ID Gene Info
AT2G03500
AT2G03500 Homeodomain-like superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT2G03500arTal_v1_Chr2_+_1059545_1059545-0.544.6e-02Click!

Activity profile of AT2G03500 motif

Sorted Z-values of AT2G03500 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_-_17441242 1.18 AT3G47340.3
AT3G47340.2
ASN1
glutamine-dependent asparagine synthase 1
Chr3_-_17441431 1.14 AT3G47340.1
ASN1
glutamine-dependent asparagine synthase 1
Chr3_-_17440176 1.12 AT3G47340.4
ASN1
glutamine-dependent asparagine synthase 1
Chr1_+_12851983 1.08 AT1G35140.1
PHI-1
Phosphate-responsive 1 family protein
Chr5_+_16441808 0.87 AT5G41080.2
GDPD2
PLC-like phosphodiesterases superfamily protein
Chr5_+_16441655 0.87 AT5G41080.1
GDPD2
PLC-like phosphodiesterases superfamily protein
Chr4_+_12137995 0.85 AT4G23180.1
AT4G23180.3
AT4G23180.2
CRK10
cysteine-rich RLK (RECEPTOR-like protein kinase) 10
Chr2_+_17137829 0.82 AT2G41100.4
AT2G41100.7
TCH3
Calcium-binding EF hand family protein
Chr2_+_17137427 0.80 AT2G41100.5
AT2G41100.6
TCH3
Calcium-binding EF hand family protein
Chr1_-_19052582 0.77 AT1G51400.1
AT1G51400
Photosystem II 5 kD protein
Chr4_+_10838310 0.76 AT4G20000.1
AT4G20000
VQ motif-containing protein
Chr2_+_17138065 0.75 AT2G41100.1
TCH3
Calcium-binding EF hand family protein
Chr2_+_17138330 0.73 AT2G41100.2
TCH3
Calcium-binding EF hand family protein
Chr1_-_23137254 0.72 AT1G62510.1
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_3288087 0.71 AT1G10070.3
AT1G10070.2
AT1G10070.1
BCAT-2
branched-chain amino acid transaminase 2
Chr2_+_17137037 0.69 AT2G41100.3
TCH3
Calcium-binding EF hand family protein
Chr1_-_2747936 0.69 AT1G08630.6
AT1G08630.7
AT1G08630.5
AT1G08630.2
THA1
threonine aldolase 1
Chr3_-_3420932 0.69 AT3G10930.1
AT3G10930
hypothetical protein
Chr5_+_19183523 0.68 AT5G47240.2
AT5G47240.1
NUDT8
nudix hydrolase homolog 8
Chr1_-_5181374 0.67 AT1G15040.2
AT1G15040.1
GAT1_2.1
Class I glutamine amidotransferase-like superfamily protein
Chr1_-_4682309 0.66 AT1G13650.3
AT1G13650.4
AT1G13650.2
AT1G13650.1
AT1G13650
hypothetical protein
Chr2_-_10454591 0.66 AT2G24600.2
AT2G24600.3
AT2G24600.4
AT2G24600.1
AT2G24600
Ankyrin repeat family protein
Chr4_-_16168711 0.65 AT4G33660.1
AT4G33660
cysteine-rich TM module stress tolerance protein
Chr1_-_19385533 0.65 AT1G52100.1
AT1G52100.3
AT1G52100.4
AT1G52100.2
AT1G52100.5
AT1G52100
Mannose-binding lectin superfamily protein
Chr4_+_13128394 0.65 AT4G25810.1
XTR6
xyloglucan endotransglycosylase 6
Chr1_-_9956960 0.65 AT1G28370.1
AT1G28370.2
ERF11
ERF domain protein 11
Chr5_+_6414488 0.64 AT5G19120.1
AT5G19120
Eukaryotic aspartyl protease family protein
Chr2_-_8913747 0.62 AT2G20670.1
AT2G20670
sugar phosphate exchanger, putative (DUF506)
Chr1_+_6389399 0.62 AT1G18570.1
MYB51
myb domain protein 51
Chr1_-_10720843 0.61 AT1G30370.1
DLAH
alpha/beta-Hydrolases superfamily protein
Chr1_-_9649323 0.61 AT1G27730.1
STZ
salt tolerance zinc finger
Chr1_+_6130025 0.61 AT1G17810.1
BETA-TIP
beta-tonoplast intrinsic protein
Chr4_+_9759203 0.59 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
Chr4_+_11929359 0.59 AT4G22690.1
CYP706A1
cytochrome P450, family 706, subfamily A, polypeptide 1
Chr4_-_9393650 0.59 AT4G16690.1
MES16
methyl esterase 16
Chr5_-_25661007 0.59 AT5G64120.1
AT5G64120
Peroxidase superfamily protein
Chr1_+_28143851 0.59 AT1G74930.1
ORA47
Integrase-type DNA-binding superfamily protein
Chr1_-_28549586 0.59 AT1G76080.1
CDSP32
chloroplastic drought-induced stress protein of 32 kD
Chr2_+_12597018 0.58 AT2G29340.2
AT2G29340.1
AT2G29340.3
AT2G29340.4
AT2G29340
NAD-dependent epimerase/dehydratase family protein
Chr1_+_27308513 0.58 AT1G72520.1
LOX4
PLAT/LH2 domain-containing lipoxygenase family protein
Chr2_+_14577083 0.57 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
Chr1_+_28746833 0.57 AT1G76600.1
AT1G76600
poly polymerase
Chr5_+_9475679 0.56 AT5G26920.1
AT5G26920.2
AT5G26920.3
CBP60G
Cam-binding protein 60-like G
Chr1_-_24558322 0.56 AT1G65970.1
TPX2
thioredoxin-dependent peroxidase 2
Chr2_-_16545746 0.56 AT2G39700.1
EXPA4
expansin A4
Chr3_-_16479559 0.55 AT3G45060.1
NRT2.6
high affinity nitrate transporter 2.6
Chr1_-_4970311 0.55 AT1G14520.1
AT1G14520.3
AT1G14520.4
MIOX1
myo-inositol oxygenase 1
Chr5_-_216773 0.55 AT5G01550.1
LECRKA4.2
lectin receptor kinase a4.1
Chr4_+_15676240 0.55 AT4G32480.1
AT4G32480
sugar phosphate exchanger, putative (DUF506)
Chr2_-_19019255 0.55 AT2G46330.2
AT2G46330.1
AGP16
arabinogalactan protein 16
Chr2_+_9924886 0.54 AT2G23320.1
AT2G23320.2
WRKY15
WRKY DNA-binding protein 15
Chr1_-_754262 0.54 AT1G03130.1
PSAD-2
photosystem I subunit D-2
Chr4_-_18459257 0.53 AT4G39780.1
AT4G39780
Integrase-type DNA-binding superfamily protein
Chr5_+_9050660 0.53 AT5G25930.1
AT5G25930
kinase family with leucine-rich repeat domain-containing protein
Chr3_-_12451556 0.53 AT3G30775.2
AT3G30775.1
ERD5
Methylenetetrahydrofolate reductase family protein
Chr3_+_59423 0.52 AT3G01175.1
AT3G01175
transmembrane protein
Chr5_+_16693832 0.52 AT5G41750.1
AT5G41750.2
AT5G41750
Disease resistance protein (TIR-NBS-LRR class) family
Chr3_+_10538005 0.51 AT3G28270.2
AT3G28270.1
AT3G28270
transmembrane protein, putative (DUF677)
Chr3_-_8268961 0.51 AT3G23170.1
AT3G23170
hypothetical protein
Chr3_-_21293158 0.51 AT3G57520.2
AT3G57520.3
AT3G57520.1
SIP2
seed imbibition 2
Chr2_+_17854557 0.51 AT2G42900.1
AT2G42900
Plant basic secretory protein (BSP) family protein
Chr1_+_26654768 0.50 AT1G70700.3
AT1G70700.2
TIFY7
TIFY domain/Divergent CCT motif family protein
Chr5_-_2622900 0.50 AT5G08150.1
SOB5
suppressor of phytochrome b 5
Chr5_-_8707885 0.50 AT5G25190.1
ESE3
Integrase-type DNA-binding superfamily protein
Chr4_-_12393982 0.50 AT4G23810.1
WRKY53
WRKY family transcription factor
Chr1_-_21057577 0.49 AT1G56240.1
PP2-B13
phloem protein 2-B13
Chr4_-_17672353 0.49 AT4G37610.1
BT5
BTB and TAZ domain protein 5
Chr2_-_11284211 0.49 AT2G26530.2
AT2G26530.1
AR781
AR781, pheromone receptor-like protein (DUF1645)
Chr5_+_26710302 0.49 AT5G66880.1
SNRK2.3
sucrose nonfermenting 1(SNF1)-related protein kinase 2.3
Chr5_+_26710469 0.49 AT5G66880.2
SNRK2.3
sucrose nonfermenting 1(SNF1)-related protein kinase 2.3
Chr5_-_19693845 0.48 AT5G48570.1
AT5G48570
FKBP-type peptidyl-prolyl cis-trans isomerase family protein
Chr4_-_7786161 0.48 AT4G13395.1
RTFL12
ROTUNDIFOLIA like 12
Chr1_+_22824414 0.48 AT1G61800.2
AT1G61800.1
GPT2
glucose-6-phosphate/phosphate translocator 2
Chr3_+_5692607 0.48 AT3G16720.1
ATL2
TOXICOS EN LEVADURA 2
Chr1_+_4978922 0.48 AT1G14550.1
AT1G14550
Peroxidase superfamily protein
Chr3_+_2717557 0.47 AT3G08940.2
AT3G08940.1
LHCB4.2
light harvesting complex photosystem II
Chr3_-_1108252 0.47 AT3G04210.2
AT3G04210
Disease resistance protein (TIR-NBS class)
Chr1_+_29178705 0.47 AT1G77640.1
AT1G77640
Integrase-type DNA-binding superfamily protein
Chr1_+_26654529 0.47 AT1G70700.1
TIFY7
TIFY domain/Divergent CCT motif family protein
Chr3_-_1108069 0.47 AT3G04210.1
AT3G04210
Disease resistance protein (TIR-NBS class)
Chr3_-_20718866 0.47 AT3G55840.1
AT3G55840
Hs1pro-1 protein
Chr5_-_14999619 0.47 AT5G37770.1
AT5G37770.2
TCH2
EF hand calcium-binding protein family
Chr4_+_13297695 0.47 AT4G26260.1
AT4G26260.2
MIOX4
myo-inositol oxygenase 4
Chr4_-_15947026 0.47 AT4G33050.4
AT4G33050.3
AT4G33050.6
AT4G33050.2
AT4G33050.1
AT4G33050.5
EDA39
calmodulin-binding family protein
Chr5_-_7366799 0.47 AT5G22250.1
CAF1b
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr2_+_13036814 0.47 AT2G30600.4
AT2G30600.5
AT2G30600.1
AT2G30600.3
AT2G30600
BTB/POZ domain-containing protein
Chr1_-_30404713 0.46 AT1G80920.1
J8
Chaperone DnaJ-domain superfamily protein
Chr3_+_16569051 0.46 AT3G45230.1
AT3G45230
hydroxyproline-rich glycoprotein family protein
Chr5_+_15616770 0.46 AT5G39020.1
AT5G39020
Malectin/receptor-like protein kinase family protein
Chr2_+_13037238 0.46 AT2G30600.6
AT2G30600.2
AT2G30600
BTB/POZ domain-containing protein
Chr4_+_11269985 0.46 AT4G21120.1
AT4G21120.2
AAT1
amino acid transporter 1
Chr2_+_9903215 0.46 AT2G23270.1
AT2G23270
transmembrane protein
Chr5_-_4206458 0.45 AT5G13190.2
AT5G13190.1
GILP
GSH-induced LITAF domain protein
Chr1_+_27736546 0.45 AT1G73750.2
AT1G73750.1
AT1G73750
alpha/beta hydrolase family protein
Chr2_-_16950705 0.45 AT2G40610.1
EXPA8
expansin A8
Chr3_-_20910623 0.45 AT3G56400.1
WRKY70
WRKY DNA-binding protein 70
Chr2_+_18495215 0.45 AT2G44840.1
ERF13
ethylene-responsive element binding factor 13
Chr5_-_24767732 0.45 AT5G61600.1
ERF104
ethylene response factor 104
Chr2_+_18253610 0.44 AT2G44130.1
AT2G44130
Galactose oxidase/kelch repeat superfamily protein
Chr3_+_618398 0.44 AT3G02840.1
AT3G02840
ARM repeat superfamily protein
Chr5_+_25784404 0.44 AT5G64510.1
TIN1
tunicamycin induced protein
Chr1_-_2260089 0.44 AT1G07350.6
AT1G07350.3
AT1G07350.2
AT1G07350.5
AT1G07350.4
AT1G07350.1
SR45a
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr4_-_14859503 0.44 AT4G30370.1
AT4G30370
RING/U-box superfamily protein
Chr1_+_5977323 0.44 AT1G17420.1
LOX3
lipoxygenase 3
Chr1_+_3031046 0.44 AT1G09390.1
AT1G09390
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_-_8850111 0.44 AT2G20560.1
AT2G20560
DNAJ heat shock family protein
Chr5_-_21453980 0.43 AT5G52900.1
MAKR6
membrane-associated kinase regulator
Chr3_-_3731251 0.43 AT3G11820.1
AT3G11820.2
SYP121
syntaxin of plants 121
Chr1_+_6832325 0.43 AT1G19770.1
PUP14
purine permease 14
Chr1_+_3777236 0.43 AT1G11260.1
STP1
sugar transporter 1
Chr4_-_6632641 0.43 AT4G10770.2
AT4G10770.1
OPT7
oligopeptide transporter 7
Chr1_-_575085 0.43 AT1G02660.1
AT1G02660
alpha/beta-Hydrolases superfamily protein
Chr5_+_22652715 0.43 AT5G55930.1
OPT1
oligopeptide transporter 1
Chr4_+_13391293 0.42 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
Chr5_+_9656949 0.42 AT5G27360.3
AT5G27360.2
AT5G27360.1
AT5G27360.4
SFP2
Major facilitator superfamily protein
Chr2_+_17886101 0.42 AT2G43010.1
AT2G43010.3
AT2G43010.4
PIF4
phytochrome interacting factor 4
Chr1_-_25580194 0.42 AT1G68250.2
AT1G68250.1
AT1G68250
hypothetical protein
Chr4_+_13390754 0.42 AT4G26530.3
FBA5
Aldolase superfamily protein
Chr2_-_8851035 0.42 AT2G20562.1
AT2G20562
taximin
Chr3_+_1172687 0.42 AT3G04420.2
AT3G04420.1
NAC048
NAC domain containing protein 48
Chr4_-_17621820 0.42 AT4G37483.1
AT4G37483
hypothetical protein
Chr5_-_816670 0.42 AT5G03350.1
AT5G03350
Legume lectin family protein
Chr1_+_5058583 0.42 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
PAP3
purple acid phosphatase 3
Chr2_+_15706285 0.41 AT2G37430.1
ZAT11
C2H2 and C2HC zinc fingers superfamily protein
Chr4_-_17606924 0.41 AT4G37450.1
AT4G37450.2
AGP18
arabinogalactan protein 18
Chr1_+_852151 0.41 AT1G03440.1
AT1G03440
Leucine-rich repeat (LRR) family protein
Chr4_+_17752079 0.41 AT4G37770.1
ACS8
1-amino-cyclopropane-1-carboxylate synthase 8
Chr4_-_11623797 0.40 AT4G21903.2
AT4G21903.1
AT4G21903
MATE efflux family protein
Chr1_-_30157808 0.40 AT1G80180.1
AT1G80180
hypothetical protein
Chr2_+_16507882 0.40 AT2G39570.1
ACR9
ACT domain-containing protein
Chr5_+_6566271 0.40 AT5G19470.1
AT5G19470.2
NUDT24
nudix hydrolase homolog 24
Chr5_-_17962276 0.40 AT5G44568.1
AT5G44568
transmembrane protein
Chr2_+_11041331 0.40 AT2G25900.2
AT2G25900.1
ATCTH
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr4_+_17852441 0.40 AT4G37980.2
AT4G37980.1
ELI3-1
cinnamyl alcohol dehydrogenase 7
Chr4_-_6224221 0.40 AT4G09900.1
MES12
methyl esterase 12
Chr2_+_11566288 0.40 AT2G27080.1
AT2G27080
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr5_-_7643098 0.40 AT5G22860.4
AT5G22860.3
AT5G22860.1
AT5G22860.6
AT5G22860.7
AT5G22860.8
AT5G22860.2
AT5G22860.5
AT5G22860
Serine carboxypeptidase S28 family protein
Chr1_-_25176230 0.39 AT1G67265.1
RTFL21
ROTUNDIFOLIA like 21
Chr5_-_1931782 0.39 AT5G06320.1
NHL3
NDR1/HIN1-like 3
Chr3_-_21008064 0.39 AT3G56710.1
AT3G56710.2
SIB1
sigma factor binding protein 1
Chr1_-_8310916 0.39 AT1G23390.1
AT1G23390
Kelch repeat-containing F-box family protein
Chr2_-_9896325 0.39 AT2G23240.2
AT2G23240.1
AtMT4b
Plant EC metallothionein-like protein, family 15
Chr5_+_15949910 0.39 AT5G39850.1
AT5G39850
Ribosomal protein S4
Chr3_-_18767529 0.39 AT3G50570.1
AT3G50570.2
AT3G50570
hydroxyproline-rich glycoprotein family protein
Chr1_-_4970007 0.38 AT1G14520.2
MIOX1
myo-inositol oxygenase 1
Chr4_-_17355891 0.38 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
Chr1_+_23650840 0.38 AT1G63750.3
AT1G63750.2
AT1G63750.1
AT1G63750
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_-_2746526 0.38 AT1G08630.4
THA1
threonine aldolase 1
Chr1_-_2747243 0.38 AT1G08630.1
THA1
threonine aldolase 1
Chr2_-_14862178 0.38 AT2G35290.1
AT2G35290
hypothetical protein
Chr5_-_8502224 0.38 AT5G24770.1
AT5G24770.2
VSP2
vegetative storage protein 2
Chr5_+_13949228 0.37 AT5G35777.1
AT5G35777

Chr1_-_2746740 0.37 AT1G08630.3
THA1
threonine aldolase 1
Chr5_-_25843555 0.37 AT5G64660.1
CMPG2
CYS, MET, PRO, and GLY protein 2
Chr1_-_4526204 0.37 AT1G13245.1
RTFL17
ROTUNDIFOLIA like 17
Chr3_-_9712659 0.37 AT3G26510.3
AT3G26510.7
AT3G26510.2
AT3G26510
Octicosapeptide/Phox/Bem1p family protein
Chr5_-_19668830 0.37 AT5G48530.1
AT5G48530
hypothetical protein
Chr5_+_4658441 0.37 AT5G14450.1
AT5G14450
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_8209270 0.37 AT3G23080.1
AT3G23080.2
AT3G23080
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr2_+_9254378 0.37 AT2G21640.1
AT2G21640
marker for oxidative stress response protein
Chr3_-_399798 0.37 AT3G02170.2
AT3G02170.3
LNG2
longifolia2
Chr2_+_10992728 0.37 AT2G25770.1
AT2G25770.2
AT2G25770
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr5_+_6127773 0.36 AT5G18470.1
AT5G18470
Curculin-like (mannose-binding) lectin family protein
Chr3_-_9712826 0.36 AT3G26510.5
AT3G26510.4
AT3G26510.1
AT3G26510.6
AT3G26510
Octicosapeptide/Phox/Bem1p family protein
Chr3_+_18465318 0.36 AT3G49780.1
PSK4
phytosulfokine 4 precursor
Chr2_-_2362149 0.36 AT2G06050.3
AT2G06050.2
OPR3
oxophytodienoate-reductase 3
Chr2_+_17886427 0.36 AT2G43010.2
PIF4
phytochrome interacting factor 4
Chr2_+_17886798 0.36 AT2G43010.5
PIF4
phytochrome interacting factor 4
Chr3_+_22501544 0.36 AT3G60910.1
AT3G60910.2
AT3G60910
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_+_10995095 0.36 AT2G25780.1
AT2G25780
hypothetical protein (DUF1677)
Chr1_-_2621545 0.36 AT1G08315.1
AT1G08315
ARM repeat superfamily protein
Chr2_+_18333370 0.36 AT2G44430.1
AT2G44430
DNA-binding bromodomain-containing protein
Chr4_-_11592425 0.36 AT4G21850.1
MSRB9
methionine sulfoxide reductase B9
Chr5_-_4743512 0.36 AT5G14700.2
AT5G14700.1
AT5G14700
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_26474786 0.36 AT1G70290.2
AT1G70290.1
TPS8
trehalose-6-phosphatase synthase S8
Chr1_+_21707175 0.36 AT1G58420.1
AT1G58420
Uncharacterized conserved protein UCP031279
Chr5_-_18360978 0.36 AT5G45310.2
AT5G45310
coiled-coil protein
Chr1_-_5727406 0.35 AT1G16730.1
UP6
hypothetical protein
Chr1_-_28233134 0.35 AT1G75220.1
ERDL6
Major facilitator superfamily protein
Chr2_+_1071453 0.35 AT2G03530.3
AT2G03530.1
AT2G03530.5
AT2G03530.4
UPS2
ureide permease 2
Chr2_+_5741592 0.35 AT2G13790.1
SERK4
somatic embryogenesis receptor-like kinase 4
Chr4_-_11592238 0.35 AT4G21850.2
MSRB9
methionine sulfoxide reductase B9
Chr3_+_6876043 0.35 AT3G19800.1
AT3G19800.2
AT3G19800
E3 ubiquitin-protein ligase, putative (DUF177)
Chr5_+_16202142 0.35 AT5G40460.1
AT5G40460
cyclin-dependent kinase inhibitor SMR3-like protein
Chr1_+_20630065 0.35 AT1G55310.2
AT1G55310.5
AT1G55310.3
SCL33
SC35-like splicing factor 33
Chr5_-_15849108 0.35 AT5G39580.2
AT5G39580.1
AT5G39580
Peroxidase superfamily protein
Chr1_+_24359328 0.35 AT1G65510.2
AT1G65510.1
AT1G65510
transmembrane protein
Chr2_-_9906032 0.35 AT2G23290.1
MYB70
myb domain protein 70
Chr1_-_28024860 0.35 AT1G74590.1
GSTU10
glutathione S-transferase TAU 10
Chr5_+_1568694 0.35 AT5G05290.1
EXPA2
expansin A2
Chr1_-_24033600 0.35 AT1G64670.1
AT1G64670.3
AT1G64670.2
BDG1
alpha/beta-Hydrolases superfamily protein
Chr2_+_12814271 0.34 AT2G30020.1
AT2G30020
Protein phosphatase 2C family protein
Chr3_+_21621994 0.34 AT3G58450.2
AT3G58450.1
AT3G58450
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr3_+_18733021 0.34 AT3G50480.2
AT3G50480.1
HR4
homolog of RPW8 4
Chr5_+_23003909 0.34 AT5G56870.1
BGAL4
beta-galactosidase 4
Chr5_-_18506382 0.34 AT5G45630.1
AT5G45630
senescence regulator (Protein of unknown function, DUF584)
Chr1_+_7346156 0.34 AT1G21010.1
AT1G21010
poly polymerase
Chr3_+_6048814 0.34 AT3G17700.1
AT3G17700.2
CNBT1
cyclic nucleotide-binding transporter 1
Chr1_+_28891976 0.34 AT1G76920.1
AT1G76920
F-box family protein
Chr3_-_8290164 0.34 AT3G23230.1
TDR1
Integrase-type DNA-binding superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G03500

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 3.4 GO:0043617 cellular response to sucrose starvation(GO:0043617)
0.5 2.1 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.4 3.8 GO:0009652 thigmotropism(GO:0009652)
0.3 1.5 GO:0019310 inositol catabolic process(GO:0019310)
0.3 1.6 GO:0006567 threonine catabolic process(GO:0006567)
0.2 0.6 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.2 0.5 GO:0060236 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.2 0.5 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.2 0.6 GO:0010185 regulation of cellular defense response(GO:0010185)
0.2 0.5 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.2 0.6 GO:0035264 multicellular organism growth(GO:0035264)
0.2 0.5 GO:0017014 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.1 0.6 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 0.4 GO:0050685 positive regulation of RNA splicing(GO:0033120) positive regulation of mRNA processing(GO:0050685)
0.1 1.0 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 0.6 GO:0015720 allantoin transport(GO:0015720)
0.1 0.7 GO:0000301 retrograde transport, vesicle recycling within Golgi(GO:0000301)
0.1 0.4 GO:0010045 response to nickel cation(GO:0010045)
0.1 0.4 GO:0033530 raffinose metabolic process(GO:0033530)
0.1 0.4 GO:0015802 basic amino acid transport(GO:0015802)
0.1 0.7 GO:0046937 phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.1 0.4 GO:0070584 cell part morphogenesis(GO:0032990) mitochondrion morphogenesis(GO:0070584)
0.1 0.4 GO:2000029 regulation of proanthocyanidin biosynthetic process(GO:2000029)
0.1 1.2 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.1 0.5 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 0.7 GO:0009099 valine biosynthetic process(GO:0009099)
0.1 0.8 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 0.5 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.1 0.2 GO:0071493 cellular response to UV-B(GO:0071493)
0.1 0.3 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.1 0.3 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.1 0.6 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.8 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.1 0.5 GO:0000085 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.1 0.4 GO:2000692 negative regulation of seed maturation(GO:2000692)
0.1 0.3 GO:0010184 cytokinin transport(GO:0010184)
0.1 0.3 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.1 0.5 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.1 0.6 GO:0006751 glutathione catabolic process(GO:0006751)
0.1 0.5 GO:0097036 regulation of plasma membrane sterol distribution(GO:0097036)
0.1 3.3 GO:0010193 response to ozone(GO:0010193)
0.1 0.4 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.1 0.1 GO:0046886 positive regulation of hormone biosynthetic process(GO:0046886)
0.1 0.9 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 0.8 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.1 0.3 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.1 0.3 GO:0045332 phospholipid translocation(GO:0045332)
0.1 0.4 GO:0051289 protein homotetramerization(GO:0051289)
0.1 0.4 GO:0071323 cellular response to chitin(GO:0071323)
0.1 0.4 GO:0034497 protein localization to pre-autophagosomal structure(GO:0034497)
0.1 0.2 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.1 1.4 GO:0009704 de-etiolation(GO:0009704)
0.1 0.9 GO:0015749 monosaccharide transport(GO:0015749)
0.1 1.0 GO:0010160 formation of organ boundary(GO:0010160) formation of anatomical boundary(GO:0048859)
0.1 0.4 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 0.2 GO:0071242 cellular response to ammonium ion(GO:0071242)
0.1 0.2 GO:0002100 tRNA wobble adenosine to inosine editing(GO:0002100)
0.1 0.2 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.1 0.2 GO:0010269 response to selenium ion(GO:0010269)
0.1 0.4 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.1 0.4 GO:0006788 heme oxidation(GO:0006788)
0.1 0.6 GO:0010120 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.1 0.6 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.1 0.4 GO:0043290 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.5 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.1 0.2 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.1 1.3 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.1 0.2 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.1 0.3 GO:2000037 regulation of stomatal complex patterning(GO:2000037)
0.1 0.6 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.1 0.8 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 0.2 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.1 0.2 GO:0045827 negative regulation of isoprenoid metabolic process(GO:0045827)
0.1 1.0 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 0.1 GO:0060151 peroxisome localization(GO:0060151)
0.1 0.4 GO:0046900 tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.1 0.2 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.1 0.9 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 0.2 GO:0030643 cellular phosphate ion homeostasis(GO:0030643) cellular divalent inorganic anion homeostasis(GO:0072501) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.1 0.2 GO:0048194 COPI-coated vesicle budding(GO:0035964) Golgi vesicle budding(GO:0048194) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 0.7 GO:0006560 proline metabolic process(GO:0006560)
0.1 0.3 GO:1903428 positive regulation of reactive oxygen species biosynthetic process(GO:1903428)
0.1 0.3 GO:0046209 nitric oxide metabolic process(GO:0046209)
0.1 0.2 GO:0034247 snoRNA splicing(GO:0034247)
0.1 0.3 GO:0010390 histone monoubiquitination(GO:0010390)
0.1 0.5 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.1 0.1 GO:0060631 regulation of meiosis I(GO:0060631)
0.1 0.1 GO:0030002 cellular anion homeostasis(GO:0030002)
0.1 0.2 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 1.2 GO:0002213 defense response to insect(GO:0002213)
0.1 0.4 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.1 0.3 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 0.2 GO:0006517 protein deglycosylation(GO:0006517)
0.1 0.2 GO:0010055 atrichoblast differentiation(GO:0010055) positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.1 0.4 GO:0045903 positive regulation of translational fidelity(GO:0045903)
0.1 0.2 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 0.1 GO:0080182 histone H3-K4 trimethylation(GO:0080182)
0.1 0.2 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.1 0.3 GO:0010226 response to lithium ion(GO:0010226)
0.1 0.2 GO:1990573 potassium ion import across plasma membrane(GO:1990573)
0.1 6.3 GO:0010200 response to chitin(GO:0010200)
0.0 0.4 GO:0010310 regulation of hydrogen peroxide metabolic process(GO:0010310)
0.0 0.4 GO:0048655 anther morphogenesis(GO:0048654) anther wall tapetum morphogenesis(GO:0048655)
0.0 1.0 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.0 0.2 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.0 0.1 GO:0019695 choline metabolic process(GO:0019695)
0.0 0.1 GO:0046825 regulation of protein export from nucleus(GO:0046825)
0.0 0.3 GO:0046443 FAD metabolic process(GO:0046443)
0.0 0.1 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.0 0.2 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.0 0.5 GO:0009554 megasporogenesis(GO:0009554)
0.0 0.1 GO:0040019 positive regulation of embryonic development(GO:0040019)
0.0 0.2 GO:0042549 photosystem II stabilization(GO:0042549)
0.0 0.1 GO:0009107 lipoate biosynthetic process(GO:0009107)
0.0 0.1 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.0 0.1 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.0 1.3 GO:0099518 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.2 GO:0009643 photosynthetic acclimation(GO:0009643)
0.0 0.1 GO:0090207 regulation of triglyceride metabolic process(GO:0090207)
0.0 0.1 GO:0030638 polyketide metabolic process(GO:0030638)
0.0 0.2 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.0 0.1 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.0 0.2 GO:1901269 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.0 0.4 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.0 0.1 GO:0015840 urea transport(GO:0015840)
0.0 0.3 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.0 0.4 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.0 1.0 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 0.4 GO:0080086 stamen filament development(GO:0080086)
0.0 0.2 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.0 0.1 GO:0046505 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.0 0.0 GO:0044848 cell cycle phase(GO:0022403) biological phase(GO:0044848) mitotic cell cycle phase(GO:0098763)
0.0 0.1 GO:0070150 mitochondrial glycyl-tRNA aminoacylation(GO:0070150)
0.0 0.3 GO:0010155 regulation of proton transport(GO:0010155)
0.0 0.2 GO:0080187 floral organ senescence(GO:0080187)
0.0 0.3 GO:0010230 alternative respiration(GO:0010230)
0.0 0.0 GO:0090436 leaf pavement cell development(GO:0090436)
0.0 0.3 GO:1900457 regulation of brassinosteroid mediated signaling pathway(GO:1900457)
0.0 1.0 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.2 GO:0044154 histone H3-K14 acetylation(GO:0044154)
0.0 0.2 GO:0015824 proline transport(GO:0015824)
0.0 0.1 GO:0036292 DNA rewinding(GO:0036292)
0.0 0.2 GO:0006829 zinc II ion transport(GO:0006829)
0.0 0.5 GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation(GO:0006616)
0.0 0.3 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.0 0.1 GO:0052746 inositol phosphorylation(GO:0052746)
0.0 0.2 GO:0046621 negative regulation of organ growth(GO:0046621)
0.0 0.1 GO:0010455 positive regulation of cell fate commitment(GO:0010455)
0.0 0.2 GO:0043407 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
0.0 0.1 GO:0001578 microtubule bundle formation(GO:0001578)
0.0 0.6 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.0 0.2 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.0 0.2 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.0 0.3 GO:0010196 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.0 0.1 GO:0009557 antipodal cell differentiation(GO:0009557)
0.0 0.1 GO:0017196 N-terminal protein amino acid acetylation(GO:0006474) N-terminal peptidyl-methionine acetylation(GO:0017196)
0.0 0.1 GO:1902065 response to L-glutamate(GO:1902065)
0.0 0.5 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.0 0.1 GO:1990428 miRNA transport(GO:1990428)
0.0 0.2 GO:0006546 glycine catabolic process(GO:0006546)
0.0 0.1 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.0 0.2 GO:0042218 1-aminocyclopropane-1-carboxylate metabolic process(GO:0018871) 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.2 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.0 0.2 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.0 0.8 GO:0030091 protein repair(GO:0030091)
0.0 0.2 GO:0006266 DNA ligation(GO:0006266) DNA ligation involved in DNA repair(GO:0051103)
0.0 0.3 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.0 0.5 GO:0080060 integument development(GO:0080060)
0.0 0.2 GO:0051014 actin filament severing(GO:0051014)
0.0 0.2 GO:0035510 DNA dealkylation(GO:0035510) DNA demethylation(GO:0080111)
0.0 0.2 GO:0015914 phospholipid transport(GO:0015914)
0.0 0.1 GO:0010351 lithium ion transport(GO:0010351)
0.0 0.2 GO:0071168 protein localization to chromatin(GO:0071168)
0.0 0.1 GO:0010447 response to acidic pH(GO:0010447)
0.0 0.4 GO:0051026 chiasma assembly(GO:0051026)
0.0 0.6 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.0 0.5 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.2 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.0 0.1 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.0 0.1 GO:0034644 cellular response to UV(GO:0034644)
0.0 0.0 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.0 0.6 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.0 0.1 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.4 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.2 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.0 0.2 GO:0080144 amino acid homeostasis(GO:0080144)
0.0 0.1 GO:0046704 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.0 0.1 GO:0031929 TOR signaling(GO:0031929)
0.0 0.1 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.0 0.5 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.1 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.0 1.4 GO:0000380 alternative mRNA splicing, via spliceosome(GO:0000380)
0.0 0.1 GO:0046521 sphingoid catabolic process(GO:0046521)
0.0 0.2 GO:0048658 anther wall tapetum development(GO:0048658)
0.0 0.2 GO:0010363 regulation of plant-type hypersensitive response(GO:0010363)
0.0 0.2 GO:0006491 N-glycan processing(GO:0006491)
0.0 0.2 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.0 0.1 GO:0006741 NADP biosynthetic process(GO:0006741)
0.0 0.1 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.0 0.1 GO:0045604 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.0 0.1 GO:0009590 detection of gravity(GO:0009590)
0.0 0.2 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 0.3 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 0.3 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.4 GO:0015976 carbon utilization(GO:0015976)
0.0 0.1 GO:0098740 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.0 0.1 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.6 GO:0009083 branched-chain amino acid catabolic process(GO:0009083)
0.0 0.3 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.0 0.4 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.1 GO:0000304 response to singlet oxygen(GO:0000304)
0.0 0.1 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.0 0.1 GO:0072659 protein localization to plasma membrane(GO:0072659)
0.0 0.1 GO:0048446 petal morphogenesis(GO:0048446)
0.0 0.2 GO:0031222 arabinan catabolic process(GO:0031222)
0.0 0.1 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.0 0.2 GO:0033617 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.0 0.2 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.4 GO:0010048 vernalization response(GO:0010048)
0.0 0.1 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.0 0.1 GO:2000014 regulation of endosperm development(GO:2000014)
0.0 0.2 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.0 0.1 GO:0031507 heterochromatin assembly(GO:0031507)
0.0 4.0 GO:0071456 cellular response to hypoxia(GO:0071456)
0.0 0.2 GO:0010152 pollen maturation(GO:0010152)
0.0 0.1 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.0 0.0 GO:0048439 flower morphogenesis(GO:0048439)
0.0 0.3 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.1 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.0 0.0 GO:0033273 response to vitamin(GO:0033273)
0.0 0.3 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0 0.6 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.2 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.6 GO:0019915 lipid storage(GO:0019915)
0.0 0.1 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.1 GO:0007019 microtubule depolymerization(GO:0007019)
0.0 0.1 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.0 0.2 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.1 GO:1901976 regulation of cell cycle checkpoint(GO:1901976)
0.0 0.1 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.3 GO:0006949 syncytium formation(GO:0006949)
0.0 0.1 GO:0071423 malate transmembrane transport(GO:0071423)
0.0 0.3 GO:0009685 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.0 0.2 GO:0043486 histone exchange(GO:0043486)
0.0 0.1 GO:0006021 inositol biosynthetic process(GO:0006021)
0.0 0.2 GO:0007143 female meiotic division(GO:0007143)
0.0 0.3 GO:0048829 root cap development(GO:0048829)
0.0 0.1 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.0 0.1 GO:0080003 thalianol metabolic process(GO:0080003)
0.0 0.1 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.0 0.7 GO:0030422 production of siRNA involved in RNA interference(GO:0030422)
0.0 0.1 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.0 0.1 GO:0007009 plasma membrane organization(GO:0007009)
0.0 0.2 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.1 GO:0033259 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.0 0.2 GO:0009556 microsporogenesis(GO:0009556)
0.0 0.2 GO:0009957 epidermal cell fate specification(GO:0009957)
0.0 0.1 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.1 GO:1901656 glycoside transport(GO:1901656)
0.0 0.1 GO:0051189 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.0 0.1 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.0 0.1 GO:0044030 regulation of DNA methylation(GO:0044030)
0.0 0.2 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.4 GO:0034050 plant-type hypersensitive response(GO:0009626) host programmed cell death induced by symbiont(GO:0034050)
0.0 0.1 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.0 0.1 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.4 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.0 GO:0050000 chromosome localization(GO:0050000)
0.0 0.2 GO:0001709 cell fate determination(GO:0001709)
0.0 0.2 GO:0006383 transcription from RNA polymerase III promoter(GO:0006383)
0.0 0.3 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.0 0.1 GO:0080009 mRNA methylation(GO:0080009)
0.0 0.0 GO:0048024 regulation of mRNA splicing, via spliceosome(GO:0048024)
0.0 0.1 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 0.4 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.1 GO:0006880 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.1 GO:0019323 pentose catabolic process(GO:0019323)
0.0 0.1 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.0 0.5 GO:0007131 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.0 0.4 GO:0010022 meristem determinacy(GO:0010022)
0.0 0.0 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.0 0.1 GO:0015919 peroxisomal membrane transport(GO:0015919)
0.0 0.1 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.0 0.2 GO:0001763 morphogenesis of a branching structure(GO:0001763) secondary shoot formation(GO:0010223) shoot axis formation(GO:0010346)
0.0 0.1 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348)
0.0 0.0 GO:0080088 spermidine hydroxycinnamate conjugate biosynthetic process(GO:0080088)
0.0 0.1 GO:0009558 embryo sac cellularization(GO:0009558)
0.0 0.0 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.0 0.1 GO:0010018 far-red light signaling pathway(GO:0010018)
0.0 0.4 GO:0042335 cuticle development(GO:0042335)
0.0 0.0 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.0 GO:0036115 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.0 0.3 GO:0010166 wax metabolic process(GO:0010166)
0.0 0.1 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.0 0.2 GO:0000266 mitochondrial fission(GO:0000266)
0.0 0.0 GO:0006772 thiamine metabolic process(GO:0006772) thiamine-containing compound metabolic process(GO:0042723)
0.0 0.1 GO:0031086 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay(GO:0031086) deadenylation-independent decapping of nuclear-transcribed mRNA(GO:0031087)
0.0 0.2 GO:0042147 retrograde transport, endosome to Golgi(GO:0042147)
0.0 0.0 GO:0097033 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.0 0.1 GO:0018904 ether metabolic process(GO:0018904)
0.0 0.1 GO:0070141 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.0 0.0 GO:0051452 vacuolar acidification(GO:0007035) intracellular pH reduction(GO:0051452)
0.0 0.2 GO:0000045 autophagosome assembly(GO:0000045) autophagosome organization(GO:1905037)
0.0 0.2 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.0 0.4 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.0 0.0 GO:0048577 negative regulation of short-day photoperiodism, flowering(GO:0048577)
0.0 0.0 GO:0034311 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.0 0.4 GO:0009690 cytokinin metabolic process(GO:0009690)
0.0 1.7 GO:0045944 positive regulation of transcription from RNA polymerase II promoter(GO:0045944)
0.0 0.1 GO:0071715 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.0 0.0 GO:0006968 cellular defense response(GO:0006968)
0.0 0.1 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 0.1 GO:0006783 heme biosynthetic process(GO:0006783)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.3 GO:0035061 interchromatin granule(GO:0035061)
0.1 0.4 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.1 0.9 GO:0009538 photosystem I reaction center(GO:0009538)
0.1 0.8 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 0.3 GO:0005652 nuclear lamina(GO:0005652)
0.1 0.5 GO:0030062 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.1 0.2 GO:0043667 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.1 0.3 GO:0090397 stigma papilla(GO:0090397)
0.1 0.5 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 0.4 GO:0071818 BAT3 complex(GO:0071818)
0.1 0.2 GO:0033281 TAT protein transport complex(GO:0033281) receptor complex(GO:0043235)
0.1 0.2 GO:0032044 DSIF complex(GO:0032044)
0.1 0.2 GO:0016461 unconventional myosin complex(GO:0016461)
0.1 0.4 GO:0034045 pre-autophagosomal structure membrane(GO:0034045)
0.1 0.9 GO:0072686 mitotic spindle(GO:0072686)
0.1 0.2 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.1 0.4 GO:0005784 Sec61 translocon complex(GO:0005784)
0.0 0.2 GO:0005640 nuclear outer membrane(GO:0005640)
0.0 0.5 GO:0043189 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.5 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.2 GO:0032807 DNA ligase IV complex(GO:0032807)
0.0 0.7 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.2 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 0.2 GO:0000126 transcription factor TFIIIB complex(GO:0000126) RNA polymerase III transcription factor complex(GO:0090576)
0.0 0.1 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.2 GO:0005960 glycine cleavage complex(GO:0005960)
0.0 0.9 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.1 GO:1990429 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.0 0.3 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 0.5 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.0 0.1 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.0 0.2 GO:0031931 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.0 0.1 GO:0044420 extracellular matrix component(GO:0044420) pollen coat(GO:0070505)
0.0 0.2 GO:0000798 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.0 0.1 GO:0034657 GID complex(GO:0034657)
0.0 0.6 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.6 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 0.2 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.2 GO:0009517 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.0 1.4 GO:0010287 plastoglobule(GO:0010287)
0.0 0.5 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.0 0.2 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.0 0.3 GO:0031902 late endosome membrane(GO:0031902)
0.0 0.1 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.0 0.1 GO:0000938 GARP complex(GO:0000938)
0.0 0.5 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.3 GO:0016459 myosin complex(GO:0016459)
0.0 0.1 GO:0000439 core TFIIH complex(GO:0000439)
0.0 0.1 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.0 0.2 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.3 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.0 0.1 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.1 GO:0089701 U2AF(GO:0089701)
0.0 0.8 GO:0005684 U2-type spliceosomal complex(GO:0005684)
0.0 0.2 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 0.2 GO:0000786 nucleosome(GO:0000786)
0.0 0.2 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.0 GO:0000811 GINS complex(GO:0000811)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 3.3 GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity(GO:0004066)
0.4 1.8 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.3 1.5 GO:0050113 inositol oxygenase activity(GO:0050113)
0.3 1.0 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.2 0.8 GO:1901982 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.2 0.5 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.2 2.3 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.2 0.5 GO:0015152 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.2 0.5 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.1 0.4 GO:0004557 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.1 1.4 GO:0015197 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.1 0.4 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.1 0.5 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.1 0.5 GO:0019156 isoamylase activity(GO:0019156)
0.1 1.4 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.1 0.4 GO:0004106 chorismate mutase activity(GO:0004106)
0.1 0.5 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 1.2 GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity(GO:0016756)
0.1 0.6 GO:0008430 selenium binding(GO:0008430)
0.1 0.9 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.1 0.3 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.1 0.3 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.1 0.4 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.1 0.6 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.6 GO:0015505 allantoin uptake transmembrane transporter activity(GO:0005274) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.1 0.5 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.1 0.8 GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen(GO:0016713)
0.1 0.3 GO:0000309 nicotinamide-nucleotide adenylyltransferase activity(GO:0000309)
0.1 0.3 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.1 0.3 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
0.1 0.1 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.1 0.5 GO:0003826 alpha-ketoacid dehydrogenase activity(GO:0003826)
0.1 0.8 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.1 0.4 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.3 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.1 0.2 GO:0015377 cation:chloride symporter activity(GO:0015377)
0.1 0.2 GO:0010242 oxygen evolving activity(GO:0010242)
0.1 0.2 GO:0080102 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.1 0.1 GO:0000064 L-ornithine transmembrane transporter activity(GO:0000064)
0.1 0.4 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 0.2 GO:0033984 indole-3-glycerol-phosphate lyase activity(GO:0033984)
0.1 0.2 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.1 0.1 GO:0001006 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 3 promoter sequence-specific DNA binding(GO:0001006) RNA polymerase III regulatory region DNA binding(GO:0001016) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.1 0.5 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.1 0.2 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.1 0.3 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.1 1.3 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.8 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 0.9 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.1 0.7 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.1 0.2 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.1 0.4 GO:0004970 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.1 0.1 GO:0019137 thioglucosidase activity(GO:0019137)
0.1 0.7 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.1 1.1 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 0.5 GO:0004383 guanylate cyclase activity(GO:0004383)
0.1 0.8 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 0.4 GO:0080025 phosphatidylinositol-3,5-bisphosphate binding(GO:0080025)
0.1 0.4 GO:0009916 alternative oxidase activity(GO:0009916)
0.1 0.3 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.1 0.6 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.1 0.3 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.1 0.3 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 1.1 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.1 0.2 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.0 0.2 GO:0004112 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.0 0.4 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.0 0.5 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.2 GO:0016649 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.0 0.1 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.0 0.1 GO:0000009 alpha-1,6-mannosyltransferase activity(GO:0000009)
0.0 0.5 GO:2001070 starch binding(GO:2001070)
0.0 0.5 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.0 1.1 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.1 GO:0032131 alkylated DNA binding(GO:0032131)
0.0 0.1 GO:0016979 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.0 0.3 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.2 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.0 0.2 GO:0015929 hexosaminidase activity(GO:0015929)
0.0 0.1 GO:0070034 telomerase RNA binding(GO:0070034)
0.0 0.1 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.0 0.3 GO:0019825 oxygen binding(GO:0019825)
0.0 0.2 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 1.3 GO:0000146 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.1 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.0 0.1 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.0 1.1 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.3 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.0 0.2 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.0 0.2 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 0.2 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.0 0.3 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.0 0.2 GO:0001664 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.0 0.2 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.0 0.1 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.0 0.7 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.2 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 0.4 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.1 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.0 0.6 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.6 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 0.1 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.0 0.1 GO:0015245 fatty acid transporter activity(GO:0015245)
0.0 0.2 GO:0004325 ferrochelatase activity(GO:0004325)
0.0 0.0 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.0 0.1 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.0 0.2 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.0 0.8 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.7 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.1 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.0 0.0 GO:0004352 glutamate dehydrogenase (NAD+) activity(GO:0004352)
0.0 0.1 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.0 0.1 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0 0.2 GO:0016755 transferase activity, transferring amino-acyl groups(GO:0016755)
0.0 0.6 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.1 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.0 0.3 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.1 GO:0097157 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
0.0 0.4 GO:0035529 NADH pyrophosphatase activity(GO:0035529)
0.0 0.6 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.2 GO:0017070 U6 snRNA binding(GO:0017070)
0.0 0.1 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.0 0.2 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 0.8 GO:0005262 calcium channel activity(GO:0005262)
0.0 0.3 GO:0017069 snRNA binding(GO:0017069)
0.0 0.3 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 0.2 GO:0004177 aminopeptidase activity(GO:0004177)
0.0 0.2 GO:0017080 ion channel inhibitor activity(GO:0008200) channel regulator activity(GO:0016247) channel inhibitor activity(GO:0016248) sodium channel regulator activity(GO:0017080) sodium channel inhibitor activity(GO:0019871)
0.0 0.3 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.0 0.1 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.0 0.2 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 0.2 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.0 0.2 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 0.1 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.0 0.1 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.2 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.2 GO:0032041 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.3 GO:0097599 xylan 1,4-beta-xylosidase activity(GO:0009044) xylanase activity(GO:0097599)
0.0 0.3 GO:0008061 chitin binding(GO:0008061)
0.0 0.1 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.0 0.0 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
0.0 0.1 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.0 0.1 GO:0033862 UMP kinase activity(GO:0033862)
0.0 0.2 GO:0000990 transcription factor activity, core RNA polymerase binding(GO:0000990)
0.0 0.1 GO:0010331 gibberellin binding(GO:0010331)
0.0 0.1 GO:0036361 racemase and epimerase activity, acting on amino acids and derivatives(GO:0016855) racemase activity, acting on amino acids and derivatives(GO:0036361) amino-acid racemase activity(GO:0047661)
0.0 0.1 GO:0004556 alpha-amylase activity(GO:0004556)
0.0 0.6 GO:0005179 hormone activity(GO:0005179)
0.0 0.1 GO:0032036 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.0 0.4 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 1.0 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.1 GO:0016972 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.0 0.1 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.0 0.1 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0 4.7 GO:0001012 RNA polymerase II regulatory region sequence-specific DNA binding(GO:0000977) RNA polymerase II regulatory region DNA binding(GO:0001012)
0.0 0.9 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.4 GO:0010333 terpene synthase activity(GO:0010333)
0.0 0.1 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.8 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.1 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.4 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.0 0.1 GO:0004300 enoyl-CoA hydratase activity(GO:0004300)
0.0 0.0 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.0 0.1 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.0 0.3 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.0 0.1 GO:0019238 cyclohydrolase activity(GO:0019238)
0.0 0.2 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.1 GO:0003951 NAD+ kinase activity(GO:0003951)
0.0 0.1 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.0 0.1 GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor(GO:0016634)
0.0 0.2 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.2 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 0.0 GO:0080107 8-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080107)
0.0 0.0 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.1 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.0 0.4 GO:0004402 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.0 0.1 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.0 0.1 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.0 0.0 GO:0030975 thiamine diphosphokinase activity(GO:0004788) thiamine binding(GO:0030975)
0.0 0.1 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.2 GO:0015248 sterol transporter activity(GO:0015248)
0.0 0.1 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.0 0.2 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.1 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.0 0.7 GO:0043130 ubiquitin binding(GO:0043130)
0.0 0.4 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.0 GO:0016728 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.0 0.3 GO:0008810 cellulase activity(GO:0008810)
0.0 2.1 GO:0043531 ADP binding(GO:0043531)
0.0 0.1 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.0 0.1 GO:0033613 activating transcription factor binding(GO:0033613)
0.0 0.3 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.1 GO:0035197 siRNA binding(GO:0035197)
0.0 0.0 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 0.0 GO:0004359 glutaminase activity(GO:0004359)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 PID AURORA A PATHWAY Aurora A signaling
0.0 0.1 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.0 0.1 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.0 0.1 SA G1 AND S PHASES Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition.
0.0 0.1 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.0 0.1 PID MTOR 4PATHWAY mTOR signaling pathway
0.0 0.1 PID TELOMERASE PATHWAY Regulation of Telomerase

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.1 0.3 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.1 0.2 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.1 0.2 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.0 0.1 REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX Genes involved in Signaling by TGF-beta Receptor Complex
0.0 0.1 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.0 0.4 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.2 REACTOME RECYCLING OF BILE ACIDS AND SALTS Genes involved in Recycling of bile acids and salts
0.0 0.2 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.0 0.3 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.2 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.0 0.0 REACTOME TELOMERE MAINTENANCE Genes involved in Telomere Maintenance
0.0 0.1 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.0 0.0 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.0 0.1 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.0 0.1 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.1 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation