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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G03340

Z-value: 2.46

Transcription factors associated with AT2G03340

Gene Symbol Gene ID Gene Info
AT2G03340
AT2G03340 WRKY DNA-binding protein 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
WRKY3arTal_v1_Chr2_-_1017222_10172220.117.0e-01Click!

Activity profile of AT2G03340 motif

Sorted Z-values of AT2G03340 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_11005638 4.98 AT3G29000.1
AT3G29000
Calcium-binding EF-hand family protein
Chr1_-_9128568 4.67 AT1G26380.1
AT1G26380
FAD-binding Berberine family protein
Chr4_+_12137995 4.63 AT4G23180.1
AT4G23180.3
AT4G23180.2
CRK10
cysteine-rich RLK (RECEPTOR-like protein kinase) 10
Chr4_-_17571743 4.44 AT4G37370.1
CYP81D8
cytochrome P450, family 81, subfamily D, polypeptide 8
Chr1_-_8075037 4.32 AT1G22810.1
AT1G22810
Integrase-type DNA-binding superfamily protein
Chr1_-_4975705 4.28 AT1G14540.1
PER4
Peroxidase superfamily protein
Chr1_+_30383561 4.20 AT1G80840.1
WRKY40
WRKY DNA-binding protein 40
Chr4_-_12143833 4.18 AT4G23190.1
AT4G23190.2
AT4G23190.3
CRK11
cysteine-rich RLK (RECEPTOR-like protein kinase) 11
Chr1_-_9649323 4.16 AT1G27730.1
STZ
salt tolerance zinc finger
Chr1_-_10720843 4.11 AT1G30370.1
DLAH
alpha/beta-Hydrolases superfamily protein
Chr2_+_16108235 4.06 AT2G38470.1
WRKY33
WRKY DNA-binding protein 33
Chr5_+_9683988 4.01 AT5G27420.1
CNI1
carbon/nitrogen insensitive 1
Chr2_-_18306395 3.97 AT2G44290.1
AT2G44290
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_10838310 3.97 AT4G20000.1
AT4G20000
VQ motif-containing protein
Chr5_-_14566439 3.81 AT5G36925.1
AT5G36925
hypothetical protein
Chr4_-_12393982 3.75 AT4G23810.1
WRKY53
WRKY family transcription factor
Chr4_+_418327 3.71 AT4G00970.1
AT4G00970.2
CRK41
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Chr4_+_6826587 3.61 AT4G11190.1
AT4G11190
Disease resistance-responsive (dirigent-like protein) family protein
Chr4_+_14026577 3.55 AT4G28350.1
AT4G28350
Concanavalin A-like lectin protein kinase family protein
Chr3_+_7770899 3.53 AT3G22060.1
AT3G22060
Receptor-like protein kinase-related family protein
Chr5_+_25939562 3.51 AT5G64905.1
PROPEP3
elicitor peptide 3 precursor
Chr1_+_6697874 3.50 AT1G19380.1
AT1G19380
sugar, putative (DUF1195)
Chr4_+_9759203 3.40 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
Chr4_-_8273903 3.37 AT4G14365.1
XBAT34
hypothetical protein
Chr4_-_12006209 3.26 AT4G22880.2
AT4G22880.1
AT4G22880.3
LDOX
leucoanthocyanidin dioxygenase
Chr1_-_20706893 3.23 AT1G55450.2
AT1G55450
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_-_12143476 3.22 AT4G23190.4
CRK11
cysteine-rich RLK (RECEPTOR-like protein kinase) 11
Chr1_-_20707071 3.17 AT1G55450.1
AT1G55450
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_16354857 3.09 AT4G34150.1
AT4G34150
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr1_-_1662259 3.09 AT1G05575.1
AT1G05575
transmembrane protein
Chr1_+_29130375 3.06 AT1G77520.1
AT1G77520
O-methyltransferase family protein
Chr2_-_16237280 3.03 AT2G38870.1
AT2G38870
Serine protease inhibitor, potato inhibitor I-type family protein
Chr3_+_7581959 2.97 AT3G21520.1
DMP1
transmembrane protein, putative (DUF679 domain membrane protein 1)
Chr3_+_22142856 2.94 AT3G59940.1
AT3G59940
Galactose oxidase/kelch repeat superfamily protein
Chr2_-_16359943 2.93 AT2G39200.1
MLO12
Seven transmembrane MLO family protein
Chr3_-_12451556 2.92 AT3G30775.2
AT3G30775.1
ERD5
Methylenetetrahydrofolate reductase family protein
Chr3_+_20776220 2.91 AT3G55980.2
AT3G55980.1
SZF1
salt-inducible zinc finger 1
Chr5_+_15616770 2.76 AT5G39020.1
AT5G39020
Malectin/receptor-like protein kinase family protein
Chr5_-_8154710 2.75 AT5G24110.1
WRKY30
WRKY DNA-binding protein 30
Chr1_-_2199773 2.67 AT1G07160.1
AT1G07160
Protein phosphatase 2C family protein
Chr1_+_5525293 2.64 AT1G16130.1
WAKL2
wall associated kinase-like 2
Chr3_+_5249112 2.55 AT3G15518.1
AT3G15518
hypothetical protein
Chr5_-_18780205 2.54 AT5G46295.1
AT5G46295
transmembrane protein
Chr2_+_13036814 2.50 AT2G30600.4
AT2G30600.5
AT2G30600.1
AT2G30600.3
AT2G30600
BTB/POZ domain-containing protein
Chr3_+_18465318 2.48 AT3G49780.1
PSK4
phytosulfokine 4 precursor
Chr2_+_13037238 2.44 AT2G30600.6
AT2G30600.2
AT2G30600
BTB/POZ domain-containing protein
Chr1_+_10897925 2.43 AT1G30720.1
AT1G30720
FAD-binding Berberine family protein
Chr1_+_5977323 2.41 AT1G17420.1
LOX3
lipoxygenase 3
Chr5_-_8856758 2.39 AT5G25440.1
AT5G25440.2
AT5G25440
Protein kinase superfamily protein
Chr1_-_28024860 2.39 AT1G74590.1
GSTU10
glutathione S-transferase TAU 10
Chr3_-_3731251 2.39 AT3G11820.1
AT3G11820.2
SYP121
syntaxin of plants 121
Chr4_+_18025886 2.36 AT4G38550.2
AT4G38550.3
AT4G38550
phospholipase-like protein (PEARLI 4) family protein
Chr4_+_7148124 2.35 AT4G11890.3
AT4G11890.1
AT4G11890.4
ARCK1
Protein kinase superfamily protein
Chr4_-_1062159 2.28 AT4G02410.1
AT4G02410
Concanavalin A-like lectin protein kinase family protein
Chr5_-_16974877 2.28 AT5G42440.1
AT5G42440
Protein kinase superfamily protein
Chr1_-_13836954 2.25 AT1G36622.1
AT1G36622
transmembrane protein
Chr3_+_229075 2.24 AT3G01600.1
NAC044
NAC domain containing protein 44
Chr1_+_24292372 2.24 AT1G65390.1
AT1G65390.3
AT1G65390.2
PP2-A5
phloem protein 2 A5
Chr5_+_834859 2.23 AT5G03390.1
AT5G03390
hypothetical protein (DUF295)
Chr5_-_1931782 2.20 AT5G06320.1
NHL3
NDR1/HIN1-like 3
Chr4_+_18025635 2.20 AT4G38550.1
AT4G38550
phospholipase-like protein (PEARLI 4) family protein
Chr1_-_9973942 2.19 AT1G28400.1
AT1G28400
GATA zinc finger protein
Chr1_-_754262 2.19 AT1G03130.1
PSAD-2
photosystem I subunit D-2
Chr5_-_19040456 2.18 AT5G46900.1
AT5G46900
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_3618058 2.17 AT2G08986.1
AT2G08986
hypothetical protein
Chr5_+_26573964 2.16 AT5G66590.1
AT5G66590
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr1_-_4066344 2.16 AT1G12030.1
AT1G12030
phosphoenolpyruvate carboxylase, putative (DUF506)
Chr4_+_6985517 2.13 AT4G11521.1
AT4G11521
Receptor-like protein kinase-related family protein
Chr1_+_24349399 2.11 AT1G65486.3
AT1G65486.4
AT1G65486.1
AT1G65486.2
AT1G65486
transmembrane protein
Chr4_+_18026207 2.07 AT4G38550.4
AT4G38550
phospholipase-like protein (PEARLI 4) family protein
Chr4_+_18026437 2.04 AT4G38550.5
AT4G38550
phospholipase-like protein (PEARLI 4) family protein
Chr1_+_26703966 2.02 AT1G70810.1
AT1G70810
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr5_-_4743512 2.02 AT5G14700.2
AT5G14700.1
AT5G14700
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_26796529 2.02 AT1G71030.1
AT1G71030.2
MYBL2
MYB-like 2
Chr2_+_9924886 2.00 AT2G23320.1
AT2G23320.2
WRKY15
WRKY DNA-binding protein 15
Chr1_-_9676157 1.96 AT1G27770.2
AT1G27770.3
AT1G27770.1
AT1G27770.4
ACA1
autoinhibited Ca2+-ATPase 1
Chr1_-_10909756 1.94 AT1G30755.3
AT1G30755.2
AT1G30755.4
AT1G30755.1
AT1G30755.5
AT1G30755.6
AT1G30755
elongation factor G, putative (DUF668)
Chr5_+_14887429 1.93 AT5G37490.1
AT5G37490
ARM repeat superfamily protein
Chr5_+_4904873 1.93 AT5G15130.2
WRKY72
WRKY DNA-binding protein 72
Chr1_+_23650840 1.93 AT1G63750.3
AT1G63750.2
AT1G63750.1
AT1G63750
Disease resistance protein (TIR-NBS-LRR class) family
Chr4_-_8283263 1.92 AT4G14370.1
AT4G14370.3
AT4G14370.2
AT4G14370
Disease resistance protein (TIR-NBS-LRR class) family
Chr3_+_5579290 1.92 AT3G16420.1
AT3G16420.3
AT3G16420.2
PBP1
PYK10-binding protein 1
Chr3_+_6876043 1.91 AT3G19800.1
AT3G19800.2
AT3G19800
E3 ubiquitin-protein ligase, putative (DUF177)
Chr4_+_6863979 1.89 AT4G11280.1
ACS6
1-aminocyclopropane-1-carboxylic acid (acc) synthase 6
Chr2_-_13523918 1.86 AT2G31800.1
AT2G31800
Integrin-linked protein kinase family
Chr5_+_18137349 1.86 AT5G44910.1
AT5G44910
Toll-Interleukin-Resistance (TIR) domain family protein
Chr2_+_13554870 1.82 AT2G31880.1
SOBIR1
Leucine-rich repeat protein kinase family protein
Chr5_+_17734706 1.80 AT5G44070.1
AT5G44070.2
CAD1
phytochelatin synthase 1 (PCS1)
Chr3_-_21216836 1.79 AT3G57330.1
ACA11
autoinhibited Ca2+-ATPase 11
Chr5_+_4218786 1.77 AT5G13220.5
AT5G13220.1
AT5G13220.3
AT5G13220.2
AT5G13220.6
AT5G13220.7
AT5G13220.4
JAZ10
jasmonate-zim-domain protein 10
Chr3_-_6436046 1.76 AT3G18710.1
PUB29
plant U-box 29
Chr5_+_4904290 1.76 AT5G15130.1
WRKY72
WRKY DNA-binding protein 72
Chr4_+_12291632 1.76 AT4G23550.1
WRKY29
WRKY family transcription factor
Chr1_+_27118177 1.76 AT1G72060.1
AT1G72060
serine-type endopeptidase inhibitor
Chr2_-_7221814 1.76 AT2G16660.2
AT2G16660.1
AT2G16660
Major facilitator superfamily protein
Chr5_+_20090648 1.75 AT5G49520.1
WRKY48
WRKY DNA-binding protein 48
Chr4_-_11397726 1.74 AT4G21390.1
AT4G21390.2
B120
S-locus lectin protein kinase family protein
Chr1_-_8839549 1.73 AT1G25220.2
AT1G25220.1
ASB1
anthranilate synthase beta subunit 1
Chr3_-_11400332 1.72 AT3G29590.1
AT5MAT
HXXXD-type acyl-transferase family protein
Chr4_+_6730928 1.72 AT4G11000.1
AT4G11000
Ankyrin repeat family protein
Chr3_-_21215428 1.65 AT3G57330.2
ACA11
autoinhibited Ca2+-ATPase 11
Chr2_-_15084559 1.65 AT2G35930.1
PUB23
plant U-box 23
Chr5_+_7927122 1.64 AT5G23510.3
AT5G23510.1
AT5G23510
hypothetical protein
Chr1_-_960916 1.64 AT1G03820.1
AT1G03820
E6-like protein
Chr1_+_9425280 1.61 AT1G27130.1
GSTU13
glutathione S-transferase tau 13
Chr4_+_17447713 1.60 AT4G37022.1
AT4G37022
hypothetical protein
Chr5_-_213472 1.59 AT5G01540.1
LECRKA4.1
lectin receptor kinase a4.1
Chr1_+_3794243 1.55 AT1G11300.1
AT1G11300.2
AT1G11300
G-type lectin S-receptor-like Serine/Threonine-kinase
Chr1_+_24357749 1.54 AT1G65500.1
AT1G65500
transmembrane protein
Chr1_+_25041833 1.53 AT1G67070.1
AT1G67070.2
DIN9
Mannose-6-phosphate isomerase, type I
Chr4_+_8883825 1.52 AT4G15560.1
CLA1
Deoxyxylulose-5-phosphate synthase
Chr4_-_16740601 1.50 AT4G35180.2
AT4G35180.1
LHT7
LYS/HIS transporter 7
Chr4_-_15291539 1.50 AT4G31550.1
AT4G31550.3
WRKY11
WRKY DNA-binding protein 11
Chr1_+_12188678 1.49 AT1G33610.1
AT1G33610
Leucine-rich repeat (LRR) family protein
Chr2_-_16235234 1.46 AT2G38860.3
AT2G38860.1
AT2G38860.2
YLS5
Class I glutamine amidotransferase-like superfamily protein
Chr1_+_19173880 1.46 AT1G51700.1
DOF1
DOF zinc finger protein 1
Chr3_+_296024 1.46 AT3G01830.2
AT3G01830.1
AT3G01830
Calcium-binding EF-hand family protein
Chr1_+_27954129 1.46 AT1G74360.1
AT1G74360
Leucine-rich repeat protein kinase family protein
Chr4_-_16371529 1.45 AT4G34180.1
AT4G34180
Cyclase family protein
Chr5_+_16447185 1.44 AT5G41100.2
AT5G41100.1
AT5G41100
hydroxyproline-rich glycoprotein family protein
Chr4_-_15291934 1.42 AT4G31550.2
WRKY11
WRKY DNA-binding protein 11
Chr4_-_18386811 1.41 AT4G39580.1
AT4G39580
Galactose oxidase/kelch repeat superfamily protein
Chr2_+_16782366 1.41 AT2G40180.1
PP2C5
phosphatase 2C5
Chr5_+_7926945 1.40 AT5G23510.2
AT5G23510
hypothetical protein
Chr4_+_18185437 1.39 AT4G39030.1
EDS5
MATE efflux family protein
Chr5_-_3863824 1.39 AT5G11970.1
AT5G11970
ABC family ABC transporter, putative (DUF3511)
Chr5_+_8773734 1.39 AT5G25280.1
AT5G25280.3
AT5G25280.2
AT5G25280
serine-rich protein-like protein
Chr5_+_22284425 1.38 AT5G54860.1
AT5G54860
Major facilitator superfamily protein
Chr5_+_16815310 1.38 AT5G42050.1
AT5G42050
DCD (Development and Cell Death) domain protein
Chr5_+_14912659 1.38 AT5G37540.1
AT5G37540
Eukaryotic aspartyl protease family protein
Chr1_+_9963448 1.37 AT1G28380.1
NSL1
MAC/Perforin domain-containing protein
Chr3_-_3836834 1.36 AT3G12040.2
AT3G12040.1
AT3G12040
DNA-3-methyladenine glycosylase (MAG)
Chr4_+_18519599 1.36 AT4G39940.1
AKN2
APS-kinase 2
Chr1_+_10892445 1.36 AT1G30700.1
AT1G30700
FAD-binding Berberine family protein
Chr4_+_7147865 1.34 AT4G11890.2
ARCK1
Protein kinase superfamily protein
Chr4_+_12539656 1.33 AT4G24160.1
AT4G24160.2
AT4G24160
alpha/beta-Hydrolases superfamily protein
Chr5_-_20146690 1.32 AT5G49630.1
AAP6
amino acid permease 6
Chr2_-_7972396 1.31 AT2G18350.1
HB24
homeobox protein 24
Chr1_+_8385188 1.31 AT1G23710.1
AT1G23710
hypothetical protein (DUF1645)
Chr4_+_14579563 1.29 AT4G29780.1
AT4G29780
nuclease
Chr3_-_6430517 1.29 AT3G18690.1
MKS1
MAP kinase substrate 1
Chr2_-_14222254 1.29 AT2G33580.1
LYK5
Protein kinase superfamily protein
Chr4_+_16451876 1.28 AT4G34410.1
RRTF1
redox responsive transcription factor 1
Chr2_-_13101371 1.28 AT2G30750.1
CYP71A12
cytochrome P450 family 71 polypeptide
Chr4_-_12120214 1.27 AT4G23130.2
AT4G23130.1
AT4G23130.3
CRK5
cysteine-rich RLK (RECEPTOR-like protein kinase) 5
Chr4_-_5640952 1.26 AT4G08850.1
AT4G08850
Leucine-rich repeat receptor-like protein kinase family protein
Chr3_-_9918810 1.26 AT3G26910.2
AT3G26910.1
AT3G26910.3
AT3G26910
hydroxyproline-rich glycoprotein family protein
Chr4_-_5640636 1.26 AT4G08850.2
AT4G08850
Leucine-rich repeat receptor-like protein kinase family protein
Chr2_-_1379130 1.26 AT2G04100.1
AT2G04100.2
AT2G04100
MATE efflux family protein
Chr4_+_14796695 1.26 AT4G30210.3
AT4G30210.2
AT4G30210.1
ATR2
P450 reductase 2
Chr2_+_18364652 1.25 AT2G44490.1
PEN2
Glycosyl hydrolase superfamily protein
Chr1_+_22034423 1.25 AT1G59870.1
PEN3
ABC-2 and Plant PDR ABC-type transporter family protein
Chr4_+_18478890 1.25 AT4G39830.3
AT4G39830.1
AT4G39830.2
AT4G39830.4
AT4G39830
Cupredoxin superfamily protein
Chr3_-_19541284 1.25 AT3G52720.4
AT3G52720.2
ACA1
alpha carbonic anhydrase 1
Chr3_-_23092850 1.25 AT3G62420.1
BZIP53
basic region/leucine zipper motif 53
Chr1_-_19458069 1.24 AT1G52240.1
ROPGEF11
rop guanine nucleotide exchange factor-like protein
Chr4_-_3950602 1.24 AT4G06700.1
AT4G06700

Chr3_-_11216866 1.24 AT3G29260.1
AT3G29260
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_19294184 1.23 AT1G51920.1
AT1G51920
transmembrane protein
Chr3_+_22248892 1.22 AT3G60200.1
AT3G60200
hypothetical protein
Chr5_-_2362228 1.21 AT5G07460.1
PMSR2
peptidemethionine sulfoxide reductase 2
Chr5_+_18842553 1.19 AT5G46470.1
RPS6
disease resistance protein (TIR-NBS-LRR class) family
Chr3_-_19542160 1.19 AT3G52720.3
AT3G52720.1
ACA1
alpha carbonic anhydrase 1
Chr5_+_23974458 1.19 AT5G59450.1
AT5G59450
GRAS family transcription factor
Chr1_+_21181585 1.18 AT1G56540.1
AT1G56540.2
AT1G56540
Disease resistance protein (TIR-NBS-LRR class) family
Chr4_+_7634930 1.18 AT4G13095.1
LCR37
low-molecular-weight cysteine-rich 37
Chr4_+_14166094 1.18 AT4G28703.1
AT4G28703
RmlC-like cupins superfamily protein
Chr2_-_10835483 1.17 AT2G25460.1
AT2G25460
EEIG1/EHBP1 protein amino-terminal domain protein
Chr1_-_29638773 1.17 AT1G78830.1
AT1G78830
Curculin-like (mannose-binding) lectin family protein
Chr5_+_1503232 1.17 AT5G05090.1
AT5G05090
Homeodomain-like superfamily protein
Chr3_+_19089026 1.15 AT3G51440.1
AT3G51440
Calcium-dependent phosphotriesterase superfamily protein
Chr1_-_1962965 1.15 AT1G06430.2
AT1G06430.3
FTSH8
FTSH protease 8
Chr2_-_12188293 1.15 AT2G28500.1
LBD11
LOB domain-containing protein 11
Chr1_-_25662276 1.13 AT1G68450.1
PDE337
VQ motif-containing protein
Chr3_-_21265827 1.13 AT3G57460.1
AT3G57460
catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding protein
Chr4_-_1548871 1.13 AT4G03480.1
AT4G03480.2
AT4G03480
Ankyrin repeat family protein
Chr1_-_1963189 1.12 AT1G06430.1
FTSH8
FTSH protease 8
Chr5_-_19381190 1.11 AT5G47850.1
CCR4
CRINKLY4 related 4
Chr5_+_17984527 1.10 AT5G44585.1
AT5G44585
hypothetical protein
Chr2_-_10835660 1.10 AT2G25460.2
AT2G25460
EEIG1/EHBP1 protein amino-terminal domain protein
Chr4_-_14009287 1.10 AT4G28270.1
RMA2
RING membrane-anchor 2
Chr3_+_7964127 1.10 AT3G22460.1
OASA2
O-acetylserine (thiol) lyase (OAS-TL) isoform A2
Chr2_-_202198 1.09 AT2G01450.2
AT2G01450.3
AT2G01450.1
MPK17
MAP kinase 17
Chr5_-_18804056 1.09 AT5G46350.1
WRKY8
WRKY DNA-binding protein 8
Chr5_-_23041617 1.08 AT5G56960.2
AT5G56960
basic helix-loop-helix (bHLH) DNA-binding family protein
Chr4_+_753422 1.06 AT4G01740.1
AT4G01740
Cysteine/Histidine-rich C1 domain family protein
Chr3_+_19569256 1.06 AT3G52800.1
AT3G52800.2
AT3G52800
A20/AN1-like zinc finger family protein
Chr4_+_8294446 1.06 AT4G14400.2
AT4G14400.3
ACD6
ankyrin repeat family protein
Chr3_-_6350832 1.06 AT3G18490.1
ASPG1
Eukaryotic aspartyl protease family protein
Chr1_-_30244949 1.05 AT1G80450.1
AT1G80450
VQ motif-containing protein
Chr1_+_19044163 1.04 AT1G51360.1
DABB1
dimeric A/B barrel domainS-protein 1
Chr3_+_7963855 1.04 AT3G22460.2
OASA2
O-acetylserine (thiol) lyase (OAS-TL) isoform A2
Chr2_-_7490176 1.02 AT2G17220.2
AT2G17220.1
Kin3
Protein kinase superfamily protein
Chr5_-_2652535 1.00 AT5G08240.1
AT5G08240
transmembrane protein
Chr1_-_7400604 0.99 AT1G21130.2
AT1G21130.1
IGMT4
O-methyltransferase family protein
Chr2_-_203126 0.98 AT2G01450.4
MPK17
MAP kinase 17
Chr1_-_26515188 0.98 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr5_+_26322817 0.98 AT5G65790.1
MYB68
myb domain protein 68
Chr3_-_7618671 0.97 AT3G21630.1
CERK1
chitin elicitor receptor kinase 1
Chr1_-_26768215 0.97 AT1G70990.1
AT1G70990
proline-rich family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G03340

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 4.2 GO:0035264 multicellular organism growth(GO:0035264)
0.8 2.4 GO:0006057 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
0.6 2.4 GO:0010185 regulation of cellular defense response(GO:0010185)
0.6 5.3 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.6 2.2 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.5 5.9 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.5 4.1 GO:0010508 positive regulation of autophagy(GO:0010508)
0.5 2.5 GO:0071323 cellular response to chitin(GO:0071323)
0.5 1.8 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.4 1.3 GO:0055089 fatty acid homeostasis(GO:0055089)
0.4 4.2 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.4 1.2 GO:0006971 hypotonic response(GO:0006971) positive regulation of seed maturation(GO:2000693)
0.4 3.1 GO:0009061 anaerobic respiration(GO:0009061)
0.3 18.1 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.3 1.6 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.3 0.9 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.3 3.0 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.3 0.9 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.3 2.3 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.2 2.9 GO:0006560 proline metabolic process(GO:0006560)
0.2 1.3 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.2 0.7 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.2 27.2 GO:0010200 response to chitin(GO:0010200)
0.2 0.8 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.2 2.4 GO:0080086 stamen filament development(GO:0080086)
0.2 1.3 GO:0015800 acidic amino acid transport(GO:0015800)
0.2 1.4 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.2 1.2 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.2 1.1 GO:1901002 positive regulation of response to salt stress(GO:1901002)
0.2 6.3 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.2 0.5 GO:0045905 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.2 1.4 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 0.4 GO:0032196 transposition(GO:0032196)
0.1 0.3 GO:1902475 L-alpha-amino acid transmembrane transport(GO:1902475)
0.1 2.1 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.1 1.5 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.1 4.1 GO:0010214 seed coat development(GO:0010214)
0.1 0.4 GO:0046740 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.1 3.7 GO:0010193 response to ozone(GO:0010193)
0.1 1.7 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.1 1.8 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.1 3.3 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.1 1.3 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 1.7 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.1 1.4 GO:0010440 stomatal lineage progression(GO:0010440)
0.1 0.7 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 2.1 GO:0009612 response to mechanical stimulus(GO:0009612)
0.1 1.1 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.1 3.1 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.1 0.6 GO:0080117 secondary growth(GO:0080117)
0.1 0.3 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.1 0.5 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.1 0.8 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.1 0.7 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.1 15.0 GO:0071456 cellular response to hypoxia(GO:0071456)
0.1 3.7 GO:0031349 positive regulation of defense response(GO:0031349)
0.1 3.4 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.1 0.7 GO:0033619 membrane protein proteolysis(GO:0033619)
0.1 1.3 GO:0009682 induced systemic resistance(GO:0009682)
0.1 0.5 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.1 0.9 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.1 0.7 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.1 1.0 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 0.3 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.1 2.4 GO:0006749 glutathione metabolic process(GO:0006749)
0.1 0.7 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 1.0 GO:0000165 MAPK cascade(GO:0000165)
0.1 0.7 GO:0006465 signal peptide processing(GO:0006465)
0.1 0.2 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.0 0.7 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 1.5 GO:0006284 base-excision repair(GO:0006284)
0.0 0.7 GO:0030497 fatty acid elongation(GO:0030497)
0.0 2.1 GO:0007031 peroxisome organization(GO:0007031)
0.0 0.4 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0 0.3 GO:0052542 defense response by callose deposition(GO:0052542)
0.0 3.6 GO:0080167 response to karrikin(GO:0080167)
0.0 0.5 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 1.0 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.4 GO:0010274 hydrotropism(GO:0010274)
0.0 0.8 GO:0010091 trichome branching(GO:0010091)
0.0 0.2 GO:0015846 polyamine transport(GO:0015846)
0.0 1.7 GO:0008037 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.0 1.1 GO:0009627 systemic acquired resistance(GO:0009627)
0.0 0.9 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.1 GO:0010032 meiotic chromosome condensation(GO:0010032)
0.0 0.9 GO:0042542 response to hydrogen peroxide(GO:0042542)
0.0 4.4 GO:0046777 protein autophosphorylation(GO:0046777)
0.0 2.1 GO:0012501 programmed cell death(GO:0012501)
0.0 0.6 GO:0007186 G-protein coupled receptor signaling pathway(GO:0007186)
0.0 0.2 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.1 GO:0006517 protein deglycosylation(GO:0006517)
0.0 0.5 GO:0090421 embryonic meristem initiation(GO:0090421)
0.0 0.4 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.8 GO:0030422 production of siRNA involved in RNA interference(GO:0030422)
0.0 0.7 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 3.8 GO:0032259 methylation(GO:0032259)
0.0 2.6 GO:0050832 defense response to fungus(GO:0050832)
0.0 0.2 GO:0045740 positive regulation of DNA replication(GO:0045740)
0.0 0.1 GO:0034227 tRNA thio-modification(GO:0034227)
0.0 0.3 GO:0009696 salicylic acid metabolic process(GO:0009696)
0.0 0.1 GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290)
0.0 0.2 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.3 GO:0008544 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.0 0.4 GO:0010022 meristem determinacy(GO:0010022)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.2 GO:0009538 photosystem I reaction center(GO:0009538)
0.1 2.1 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.7 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.1 4.4 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 2.6 GO:0009504 cell plate(GO:0009504)
0.0 3.0 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.0 5.0 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.1 GO:0005719 nuclear euchromatin(GO:0005719)
0.0 1.1 GO:0000145 exocyst(GO:0000145)
0.0 1.6 GO:0005811 lipid particle(GO:0005811)
0.0 1.3 GO:0016607 nuclear speck(GO:0016607)
0.0 1.9 GO:0099503 secretory vesicle(GO:0099503)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.3 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.8 2.4 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.6 1.7 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.5 1.5 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.4 4.1 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.4 1.8 GO:0008490 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) cadmium ion binding(GO:0046870)
0.4 2.5 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.3 1.7 GO:0004049 anthranilate synthase activity(GO:0004049)
0.3 1.4 GO:0043916 DNA-7-methylguanine glycosylase activity(GO:0043916)
0.3 4.8 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.3 2.4 GO:0043495 protein anchor(GO:0043495)
0.3 1.3 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.3 6.3 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.2 1.0 GO:0070405 ammonium ion binding(GO:0070405)
0.2 1.2 GO:0036456 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.2 0.7 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.2 1.3 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.2 1.8 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.2 0.9 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.2 0.6 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.2 1.8 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.2 1.4 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 1.3 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.1 2.1 GO:0004124 cysteine synthase activity(GO:0004124)
0.1 1.7 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.1 0.9 GO:0004645 phosphorylase activity(GO:0004645)
0.1 1.5 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 4.1 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.1 0.9 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 1.3 GO:0008061 chitin binding(GO:0008061)
0.1 1.3 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.1 0.3 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.1 0.3 GO:0000064 L-ornithine transmembrane transporter activity(GO:0000064)
0.1 4.1 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 0.5 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.1 0.7 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 2.5 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.1 2.3 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 0.4 GO:0035197 siRNA binding(GO:0035197)
0.1 0.3 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.1 0.5 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.1 0.7 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.1 0.7 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.1 0.7 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 2.9 GO:0004707 MAP kinase activity(GO:0004707)
0.1 2.9 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.7 GO:0004096 catalase activity(GO:0004096)
0.1 1.0 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 1.0 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 4.1 GO:0004364 glutathione transferase activity(GO:0004364)
0.1 3.1 GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors(GO:0016706)
0.1 1.2 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 1.0 GO:0090599 alpha-glucosidase activity(GO:0090599)
0.1 1.2 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 27.5 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 0.5 GO:0052736 beta-glucanase activity(GO:0052736)
0.0 4.8 GO:0005516 calmodulin binding(GO:0005516)
0.0 0.3 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.0 0.8 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 1.0 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 1.9 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.4 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.2 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.1 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.0 1.1 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.0 0.0 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.0 0.5 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.7 GO:0008810 cellulase activity(GO:0008810)
0.0 0.8 GO:0010181 FMN binding(GO:0010181)
0.0 0.3 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.1 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.0 7.4 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 0.1 GO:0033613 activating transcription factor binding(GO:0033613)
0.0 2.5 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 0.5 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 30.0 GO:0001071 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0 0.2 GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.0 0.3 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.2 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.0 1.2 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.1 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 3.0 PID AP1 PATHWAY AP-1 transcription factor network
0.2 1.2 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.0 0.5 PID E2F PATHWAY E2F transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.2 REACTOME PKB MEDIATED EVENTS Genes involved in PKB-mediated events
0.3 1.4 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.3 2.0 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.2 2.0 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.2 1.7 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation