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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G78700

Z-value: 1.40

Transcription factors associated with AT1G78700

Gene Symbol Gene ID Gene Info
AT1G78700
AT1G78700 BES1/BZR1 homolog 4

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
BEH4arTal_v1_Chr1_+_29599349_29599349-0.806.4e-04Click!

Activity profile of AT1G78700 motif

Sorted Z-values of AT1G78700 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_-_197974 2.79 AT3G01500.1
CA1
carbonic anhydrase 1
Chr3_-_197564 2.78 AT3G01500.4
CA1
carbonic anhydrase 1
Chr3_-_198160 2.77 AT3G01500.2
CA1
carbonic anhydrase 1
Chr3_-_198664 2.75 AT3G01500.3
CA1
carbonic anhydrase 1
Chr5_+_19428888 2.40 AT5G47980.1
AT5G47980
HXXXD-type acyl-transferase family protein
Chr5_+_1119937 2.38 AT5G04120.1
AT5G04120
Phosphoglycerate mutase family protein
Chr4_-_14002069 2.23 AT4G28250.2
AT4G28250.3
AT4G28250.4
AT4G28250.1
EXPB3
expansin B3
Chr1_+_6130025 2.20 AT1G17810.1
BETA-TIP
beta-tonoplast intrinsic protein
Chr5_-_15135169 2.10 AT5G37990.1
AT5G37990
S-adenosyl-L-methionine-dependent methyltransferase superfamily protein
Chr1_+_1244947 2.08 AT1G04560.1
AT1G04560
AWPM-19-like family protein
Chr1_-_3398358 2.05 AT1G10370.1
ERD9
Glutathione S-transferase family protein
Chr1_+_29130375 2.00 AT1G77520.1
AT1G77520
O-methyltransferase family protein
Chr1_+_20458952 1.94 AT1G54870.2
AT1G54870.1
AT1G54870
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_+_13391293 1.94 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
Chr2_-_14863412 1.91 AT2G35300.1
LEA18
Late embryogenesis abundant protein, group 1 protein
Chr4_+_13390754 1.88 AT4G26530.3
FBA5
Aldolase superfamily protein
Chr1_-_9649323 1.84 AT1G27730.1
STZ
salt tolerance zinc finger
Chr4_-_11592238 1.80 AT4G21850.2
MSRB9
methionine sulfoxide reductase B9
Chr5_+_4488476 1.77 AT5G13930.1
TT4
Chalcone and stilbene synthase family protein
Chr4_-_11592425 1.77 AT4G21850.1
MSRB9
methionine sulfoxide reductase B9
Chr3_-_2130451 1.66 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr1_-_23137254 1.65 AT1G62510.1
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_17123785 1.64 AT1G45201.3
AT1G45201.1
AT1G45201.2
TLL1
triacylglycerol lipase-like 1
Chr1_-_4970311 1.64 AT1G14520.1
AT1G14520.3
AT1G14520.4
MIOX1
myo-inositol oxygenase 1
Chr2_-_17438168 1.62 AT2G41800.1
AT2G41800
imidazolonepropionase (Protein of unknown function, DUF642)
Chr5_-_17099595 1.57 AT5G42650.1
AOS
allene oxide synthase
Chr2_+_19568464 1.56 AT2G47770.1
TSPO
TSPO(outer membrane tryptophan-rich sensory protein)-like protein
Chr3_+_5692607 1.54 AT3G16720.1
ATL2
TOXICOS EN LEVADURA 2
Chr5_-_15849108 1.52 AT5G39580.2
AT5G39580.1
AT5G39580
Peroxidase superfamily protein
Chr5_-_17962276 1.51 AT5G44568.1
AT5G44568
transmembrane protein
Chr4_-_17777445 1.48 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
Chr5_+_26573964 1.48 AT5G66590.1
AT5G66590
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr1_+_12851983 1.47 AT1G35140.1
PHI-1
Phosphate-responsive 1 family protein
Chr5_+_9683988 1.45 AT5G27420.1
CNI1
carbon/nitrogen insensitive 1
Chr3_+_22142856 1.42 AT3G59940.1
AT3G59940
Galactose oxidase/kelch repeat superfamily protein
Chr1_+_15081952 1.42 AT1G40104.1
AT1G40104
hypothetical protein
Chr4_+_13959872 1.40 AT4G28085.1
AT4G28085.2
AT4G28085
transmembrane protein
Chr2_+_7606728 1.38 AT2G17500.2
AT2G17500.1
AT2G17500.3
AT2G17500.4
AT2G17500
Auxin efflux carrier family protein
Chr5_-_17005510 1.38 AT5G42530.1
AT5G42530
hypothetical protein
Chr2_-_16780368 1.38 AT2G40170.1
GEA6
Stress induced protein
Chr2_-_9538963 1.37 AT2G22470.1
AGP2
arabinogalactan protein 2
Chr1_-_19493122 1.37 AT1G52342.1
AT1G52342
hypothetical protein
Chr4_+_9759203 1.36 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
Chr2_-_9896325 1.35 AT2G23240.2
AT2G23240.1
AtMT4b
Plant EC metallothionein-like protein, family 15
Chr5_+_448092 1.35 AT5G02230.1
AT5G02230.3
AT5G02230.2
AT5G02230
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_8181107 1.34 AT5G24155.2
AT5G24155.3
AT5G24155.1
AT5G24155
FAD/NAD(P)-binding oxidoreductase family protein
Chr5_-_17166032 1.33 AT5G42800.1
DFR
dihydroflavonol 4-reductase
Chr5_-_15175566 1.31 AT5G38030.1
AT5G38030
MATE efflux family protein
Chr2_-_16237280 1.31 AT2G38870.1
AT2G38870
Serine protease inhibitor, potato inhibitor I-type family protein
Chr5_+_84474 1.30 AT5G01210.1
AT5G01210
HXXXD-type acyl-transferase family protein
Chr3_+_9409160 1.27 AT3G25780.1
AOC3
allene oxide cyclase 3
Chr1_-_7906969 1.27 AT1G22400.1
UGT85A1
UDP-Glycosyltransferase superfamily protein
Chr3_+_18465318 1.26 AT3G49780.1
PSK4
phytosulfokine 4 precursor
Chr3_+_512220 1.26 AT3G02480.1
AT3G02480
Late embryogenesis abundant protein (LEA) family protein
Chr3_+_16789780 1.26 AT3G45730.1
AT3G45730
hypothetical protein
Chr5_+_6282881 1.26 AT5G18840.1
AT5G18840
Major facilitator superfamily protein
Chr4_+_10375244 1.26 AT4G18950.1
AT4G18950.2
AT4G18950
Integrin-linked protein kinase family
Chr2_+_3618058 1.26 AT2G08986.1
AT2G08986
hypothetical protein
Chr5_-_25843555 1.24 AT5G64660.1
CMPG2
CYS, MET, PRO, and GLY protein 2
Chr2_+_19508929 1.22 AT2G47550.1
AT2G47550
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_+_18519599 1.22 AT4G39940.1
AKN2
APS-kinase 2
Chr1_-_23830066 1.22 AT1G64200.2
AT1G64200.3
AT1G64200.1
VHA-E3
vacuolar H+-ATPase subunit E isoform 3
Chr5_-_3993767 1.19 AT5G12340.2
AT5G12340
DUF4228 domain protein
Chr1_-_575085 1.17 AT1G02660.1
AT1G02660
alpha/beta-Hydrolases superfamily protein
Chr1_+_24257216 1.17 AT1G65310.1
XTH17
xyloglucan endotransglucosylase/hydrolase 17
Chr5_-_18371021 1.16 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr3_-_21293158 1.16 AT3G57520.2
AT3G57520.3
AT3G57520.1
SIP2
seed imbibition 2
Chr1_+_24257054 1.16 AT1G65310.2
XTH17
xyloglucan endotransglucosylase/hydrolase 17
Chr3_+_7906521 1.15 AT3G22370.1
AOX1A
alternative oxidase 1A
Chr1_+_26654768 1.14 AT1G70700.3
AT1G70700.2
TIFY7
TIFY domain/Divergent CCT motif family protein
Chr3_-_6000447 1.14 AT3G17520.1
AT3G17520
Late embryogenesis abundant protein (LEA) family protein
Chr5_-_4986377 1.13 AT5G15350.1
ENODL17
early nodulin-like protein 17
Chr4_-_17711031 1.13 AT4G37700.1
AT4G37700
hypothetical protein
Chr1_+_30383561 1.12 AT1G80840.1
WRKY40
WRKY DNA-binding protein 40
Chr4_-_8138392 1.12 AT4G14130.1
XTH15
xyloglucan endotransglucosylase/hydrolase 15
Chr3_-_20418910 1.12 AT3G55090.1
ABCG16
ABC-2 type transporter family protein
Chr3_+_3442237 1.12 AT3G10985.1
SAG20
senescence associated gene 20
Chr4_+_1041086 1.11 AT4G02360.1
AT4G02360
transmembrane protein, putative (Protein of unknown function, DUF538)
Chr2_+_11809279 1.11 AT2G27690.1
CYP94C1
cytochrome P450, family 94, subfamily C, polypeptide 1
Chr1_+_26654529 1.10 AT1G70700.1
TIFY7
TIFY domain/Divergent CCT motif family protein
Chr2_+_14573030 1.09 AT2G34600.1
JAZ7
jasmonate-zim-domain protein 7
Chr5_-_442187 1.09 AT5G02220.1
AT5G02220
cyclin-dependent kinase inhibitor
Chr2_+_10066117 1.09 AT2G23680.2
AT2G23680.1
AT2G23680
Cold acclimation protein WCOR413 family
Chr4_-_18084630 1.08 AT4G38740.1
ROC1
rotamase CYP 1
Chr1_+_2025544 1.08 AT1G06620.1
AT1G06620.2
AT1G06620
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_+_10992728 1.07 AT2G25770.1
AT2G25770.2
AT2G25770
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr4_+_4886962 1.06 AT4G08040.1
ACS11
1-aminocyclopropane-1-carboxylate synthase 11
Chr1_+_9425280 1.06 AT1G27130.1
GSTU13
glutathione S-transferase tau 13
Chr1_-_4970007 1.05 AT1G14520.2
MIOX1
myo-inositol oxygenase 1
Chr1_+_5596633 1.04 AT1G16370.1
OCT6
organic cation/carnitine transporter 6
Chr3_+_20776220 1.03 AT3G55980.2
AT3G55980.1
SZF1
salt-inducible zinc finger 1
Chr1_-_22595338 1.03 AT1G61260.1
AT1G61260
cotton fiber (DUF761)
Chr1_-_21063047 1.02 AT1G56250.1
PP2-B14
phloem protein 2-B14
Chr1_+_12237547 1.02 AT1G33760.1
AT1G33760
Integrase-type DNA-binding superfamily protein
Chr5_-_3993610 1.02 AT5G12340.1
AT5G12340
DUF4228 domain protein
Chr2_-_16244531 1.01 AT2G38905.1
AT2G38905
Low temperature and salt responsive protein family
Chr2_-_13631929 1.01 AT2G32020.1
AT2G32020
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr5_+_24248920 1.01 AT5G60220.1
TET4
tetraspanin4
Chr3_+_21621994 1.01 AT3G58450.2
AT3G58450.1
AT3G58450
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr1_+_6389399 1.00 AT1G18570.1
MYB51
myb domain protein 51
Chr1_+_26464226 1.00 AT1G70270.2
AT1G70270.1
AT1G70270
transcription factor
Chr4_+_14920376 1.00 AT4G30530.1
GGP1
Class I glutamine amidotransferase-like superfamily protein
Chr2_+_11037303 0.99 AT2G25890.2
AT2G25890.1
AT2G25890
Oleosin family protein
Chr3_+_16271511 0.99 AT3G44720.1
ADT4
arogenate dehydratase 4
Chr3_+_19090947 0.99 AT3G51450.1
AT3G51450
Calcium-dependent phosphotriesterase superfamily protein
Chr1_+_28776861 0.98 AT1G76680.2
OPR1
12-oxophytodienoate reductase 1
Chr5_+_3545211 0.98 AT5G11140.1
AT5G11140
phospholipase-like protein (PEARLI 4) family protein
Chr1_+_28776626 0.98 AT1G76680.1
OPR1
12-oxophytodienoate reductase 1
Chr2_+_6810395 0.97 AT2G15620.1
NIR1
nitrite reductase 1
Chr2_-_16198577 0.97 AT2G38750.1
ANNAT4
annexin 4
Chr4_+_7740283 0.97 AT4G13290.1
CYP71A19
cytochrome P450, family 71, subfamily A, polypeptide 19
Chr2_-_14537556 0.97 AT2G34490.1
CYP710A2
cytochrome P450, family 710, subfamily A, polypeptide 2
Chr3_-_5254458 0.96 AT3G15530.2
AT3G15530.1
AT3G15530
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_+_1608988 0.96 AT5G05440.1
PYL5
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr5_-_17758275 0.96 AT5G44120.2
AT5G44120.1
AT5G44120.3
CRA1
RmlC-like cupins superfamily protein
Chr2_+_18253610 0.95 AT2G44130.1
AT2G44130
Galactose oxidase/kelch repeat superfamily protein
Chr1_+_29502506 0.95 AT1G78410.1
AT1G78410.2
AT1G78410
VQ motif-containing protein
Chr2_-_16198832 0.94 AT2G38750.2
ANNAT4
annexin 4
Chr5_+_8217191 0.94 AT5G24210.1
AT5G24210.2
AT5G24210.3
AT5G24210
alpha/beta-Hydrolases superfamily protein
Chr1_-_19052582 0.94 AT1G51400.1
AT1G51400
Photosystem II 5 kD protein
Chr1_+_6945695 0.93 AT1G20030.1
AT1G20030
Pathogenesis-related thaumatin superfamily protein
Chr1_+_6945425 0.93 AT1G20030.2
AT1G20030
Pathogenesis-related thaumatin superfamily protein
Chr3_-_22972239 0.92 AT3G62020.2
AT3G62020.1
GLP10
germin-like protein 10
Chr1_+_6612630 0.92 AT1G19150.1
Lhca6
PSI type II chlorophyll a/b-binding protein (Lhca2*1)
Chr1_+_852151 0.92 AT1G03440.1
AT1G03440
Leucine-rich repeat (LRR) family protein
Chr1_-_7040231 0.92 AT1G20330.1
SMT2
sterol methyltransferase 2
Chr5_+_5078200 0.92 AT5G15600.1
AT5G15600.2
SP1L4
SPIRAL1-like4
Chr1_+_11774484 0.91 AT1G32560.1
AtLEA4-1
Late embryogenesis abundant protein, group 1 protein
Chr3_+_3694956 0.91 AT3G11690.1
AT3G11690
hypothetical protein
Chr1_-_27276317 0.91 AT1G72450.2
JAZ6
jasmonate-zim-domain protein 6
Chr5_+_6414488 0.91 AT5G19120.1
AT5G19120
Eukaryotic aspartyl protease family protein
Chr4_-_11623797 0.91 AT4G21903.2
AT4G21903.1
AT4G21903
MATE efflux family protein
Chr2_-_15014147 0.90 AT2G35710.3
AT2G35710.4
AT2G35710.1
PGSIP7
Nucleotide-diphospho-sugar transferases superfamily protein
Chr1_-_27276562 0.90 AT1G72450.1
JAZ6
jasmonate-zim-domain protein 6
Chr4_-_11896480 0.90 AT4G22590.1
TPPG
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_9242854 0.90 AT5G26330.1
AT5G26330
Cupredoxin superfamily protein
Chr5_+_24494291 0.89 AT5G60890.1
MYB34
myb domain protein 34
Chr5_-_122507 0.89 AT5G01300.2
AT5G01300.1
AT5G01300.3
AT5G01300
PEBP (phosphatidylethanolamine-binding protein) family protein
Chr1_+_4864881 0.89 AT1G14240.2
AT1G14240.4
AT1G14240.1
AT1G14240.3
AT1G14240
GDA1/CD39 nucleoside phosphatase family protein
Chr5_-_4743512 0.89 AT5G14700.2
AT5G14700.1
AT5G14700
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_-_20052817 0.89 AT3G54150.2
AT3G54150.1
AT3G54150
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_24442388 0.88 AT1G65730.1
YSL7
YELLOW STRIPE like 7
Chr2_-_275002 0.88 AT2G01610.1
AT2G01610
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_+_1672070 0.88 AT5G05600.1
AT5G05600.2
AT5G05600
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_+_5718498 0.88 AT5G17350.1
AT5G17350
hypothetical protein
Chr2_-_15846051 0.88 AT2G37810.1
AT2G37810
Cysteine/Histidine-rich C1 domain family protein
Chr4_+_1415617 0.87 AT4G03210.1
XTH9
xyloglucan endotransglucosylase/hydrolase 9
Chr3_+_8610979 0.87 AT3G23840.1
AT3G23840
HXXXD-type acyl-transferase family protein
Chr2_+_9840456 0.87 AT2G23110.1
AT2G23110.2
AT2G23110
Late embryogenesis abundant protein, group 6
Chr1_-_8399836 0.86 AT1G23740.1
AOR
Oxidoreductase, zinc-binding dehydrogenase family protein
Chr1_-_1547798 0.86 AT1G05300.2
AT1G05300.1
ZIP5
zinc transporter 5 precursor
Chr4_+_15230008 0.86 AT4G31380.1
FLP1
flowering-promoting factor-like protein
Chr1_+_6515373 0.86 AT1G18870.1
AT1G18870.3
ICS2
isochorismate synthase 2
Chr4_+_1415953 0.85 AT4G03210.2
XTH9
xyloglucan endotransglucosylase/hydrolase 9
Chr1_-_5447880 0.85 AT1G15820.1
LHCB6
light harvesting complex photosystem II subunit 6
Chr1_+_26705420 0.85 AT1G70820.1
AT1G70820.2
AT1G70820
phosphoglucomutase, putative / glucose phosphomutase
Chr2_-_17441416 0.85 AT2G41810.1
AT2G41810
imidazolonepropionase (Protein of unknown function, DUF642)
Chr2_-_15483706 0.85 AT2G36885.2
AT2G36885.1
AT2G36885
translation initiation factor
Chr1_+_7238693 0.84 AT1G20823.1
AT1G20823
RING/U-box superfamily protein
Chr1_+_6515644 0.84 AT1G18870.2
ICS2
isochorismate synthase 2
Chr4_+_17524461 0.83 AT4G37240.1
AT4G37240
HTH-type transcriptional regulator
Chr4_+_8913653 0.83 AT4G15620.1
AT4G15620
Uncharacterized protein family (UPF0497)
Chr2_-_16573519 0.83 AT2G39730.3
RCA
rubisco activase
Chr2_-_16573692 0.83 AT2G39730.1
AT2G39730.2
RCA
rubisco activase
Chr5_-_6409666 0.82 AT5G19100.1
AT5G19100
Eukaryotic aspartyl protease family protein
Chr4_+_14368877 0.82 AT4G29140.1
ADS1
MATE efflux family protein
Chr5_+_13949228 0.82 AT5G35777.1
AT5G35777

Chr4_+_160643 0.81 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr1_+_12964986 0.81 AT1G35330.1
AT1G35330
RING/U-box superfamily protein
Chr5_-_19172956 0.81 AT5G47220.1
ERF2
ethylene responsive element binding factor 2
Chr1_+_28163344 0.81 AT1G75000.1
AT1G75000
GNS1/SUR4 membrane protein family
Chr1_+_3288087 0.81 AT1G10070.3
AT1G10070.2
AT1G10070.1
BCAT-2
branched-chain amino acid transaminase 2
Chr5_-_16974877 0.81 AT5G42440.1
AT5G42440
Protein kinase superfamily protein
Chr4_+_14796695 0.80 AT4G30210.3
AT4G30210.2
AT4G30210.1
ATR2
P450 reductase 2
Chr2_-_8518194 0.79 AT2G19760.1
PRF1
profilin 1
Chr4_+_11907355 0.79 AT4G22620.1
AT4G22620
SAUR-like auxin-responsive protein family
Chr1_-_27640643 0.79 AT1G73500.1
MKK9
MAP kinase kinase 9
Chr4_+_9157471 0.79 AT4G16160.2
AT4G16160.1
ATOEP16-2
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Chr3_+_18941925 0.78 AT3G50980.1
XERO1
dehydrin xero 1
Chr5_-_20191604 0.78 AT5G49690.1
AT5G49690
UDP-Glycosyltransferase superfamily protein
Chr3_-_6980523 0.78 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
Chr3_-_19099849 0.78 AT3G51470.2
AT3G51470
Protein phosphatase 2C family protein
Chr4_-_14820595 0.78 AT4G30270.1
XTH24
xyloglucan endotransglucosylase/hydrolase 24
Chr1_-_970058 0.78 AT1G03840.2
MGP
C2H2 and C2HC zinc fingers superfamily protein
Chr3_-_20769324 0.78 AT3G55970.2
AT3G55970.1
JRG21
jasmonate-regulated gene 21
Chr5_-_4574541 0.77 AT5G14180.3
AT5G14180.5
AT5G14180.1
MPL1
Myzus persicae-induced lipase 1
Chr3_+_5187082 0.77 AT3G15357.1
AT3G15357
phosphopantothenoylcysteine decarboxylase subunit
Chr2_+_16745628 0.77 AT2G40100.1
AT2G40100.2
LHCB4.3
light harvesting complex photosystem II
Chr3_+_16123426 0.77 AT3G44540.1
AT3G44540.3
FAR4
fatty acid reductase 4
Chr3_-_19566492 0.77 AT3G52790.1
AT3G52790
peptidoglycan-binding LysM domain-containing protein
Chr1_-_2287730 0.77 AT1G07440.2
AT1G07440.1
AT1G07440
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_+_16569051 0.77 AT3G45230.1
AT3G45230
hydroxyproline-rich glycoprotein family protein
Chr3_-_222827 0.77 AT3G01570.1
AT3G01570
Oleosin family protein
Chr1_-_59215 0.77 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
Chr2_+_163954 0.76 AT2G01340.1
At17.1
plastid movement impaired protein
Chr1_+_1882907 0.76 AT1G06160.1
ORA59
octadecanoid-responsive AP2/ERF 59
Chr3_-_17337733 0.76 AT3G47070.1
AT3G47070
thylakoid soluble phosphoprotein
Chr5_+_25322975 0.76 AT5G63130.2
AT5G63130.1
AT5G63130
Octicosapeptide/Phox/Bem1p family protein
Chr2_-_13633551 0.75 AT2G32030.1
AT2G32030
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr1_-_9753952 0.75 AT1G27990.1
AT1G27990
transmembrane protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G78700

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 11.5 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.6 2.4 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.5 2.7 GO:0019310 inositol catabolic process(GO:0019310)
0.5 1.8 GO:0035264 multicellular organism growth(GO:0035264)
0.4 2.1 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.4 2.0 GO:1901568 icosanoid metabolic process(GO:0006690) fatty acid derivative metabolic process(GO:1901568)
0.4 1.2 GO:0033530 raffinose metabolic process(GO:0033530)
0.4 6.3 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.3 1.9 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.3 2.1 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.3 0.8 GO:0071258 cellular response to gravity(GO:0071258)
0.3 2.3 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.2 1.2 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.2 0.7 GO:0033194 response to hydroperoxide(GO:0033194)
0.2 0.7 GO:0043181 cellular sodium ion homeostasis(GO:0006883) vacuolar sequestering(GO:0043181)
0.2 1.1 GO:0043620 regulation of DNA-templated transcription in response to stress(GO:0043620)
0.2 0.6 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.2 1.5 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.2 1.9 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.2 0.6 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.2 0.8 GO:0042989 sequestering of actin monomers(GO:0042989)
0.2 1.4 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.2 0.8 GO:0016139 glycoside catabolic process(GO:0016139)
0.2 0.6 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.2 0.9 GO:0006106 fumarate metabolic process(GO:0006106)
0.2 4.7 GO:0030091 protein repair(GO:0030091)
0.2 0.9 GO:0042549 photosystem II stabilization(GO:0042549)
0.2 5.2 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.2 0.5 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.2 2.4 GO:0006949 syncytium formation(GO:0006949)
0.2 0.7 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.2 4.0 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.2 0.5 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.2 0.5 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.2 1.1 GO:0043066 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.2 0.5 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.2 0.5 GO:0045905 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.1 1.5 GO:0010120 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.1 0.6 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 0.8 GO:0010451 floral meristem growth(GO:0010451)
0.1 0.8 GO:0006013 mannose metabolic process(GO:0006013)
0.1 1.7 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 6.2 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.1 1.7 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 0.4 GO:0051639 actin filament network formation(GO:0051639)
0.1 0.7 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.1 0.7 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.1 0.4 GO:0010198 synergid death(GO:0010198)
0.1 0.6 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 1.4 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 1.1 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 0.7 GO:0043290 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 1.0 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.1 0.8 GO:0009099 valine biosynthetic process(GO:0009099)
0.1 0.3 GO:2000037 regulation of stomatal complex patterning(GO:2000037)
0.1 0.3 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 0.5 GO:1900542 regulation of nucleotide metabolic process(GO:0006140) regulation of purine nucleotide metabolic process(GO:1900542)
0.1 15.1 GO:0010200 response to chitin(GO:0010200)
0.1 7.2 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 1.5 GO:0042374 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.1 0.8 GO:0090059 protoxylem development(GO:0090059)
0.1 0.4 GO:0050878 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.1 3.8 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.1 0.5 GO:0010226 response to lithium ion(GO:0010226)
0.1 0.4 GO:0010351 lithium ion transport(GO:0010351)
0.1 0.3 GO:1901002 positive regulation of response to salt stress(GO:1901002)
0.1 0.3 GO:0045981 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.1 0.7 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.1 2.4 GO:0019915 lipid storage(GO:0019915)
0.1 0.9 GO:0009799 specification of symmetry(GO:0009799)
0.1 0.4 GO:0010185 regulation of cellular defense response(GO:0010185)
0.1 0.2 GO:0010450 inflorescence meristem growth(GO:0010450)
0.1 0.4 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 0.3 GO:0015755 hexose transport(GO:0008645) fructose transport(GO:0015755) vacuolar transmembrane transport(GO:0034486)
0.1 0.3 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1 3.4 GO:0016126 sterol biosynthetic process(GO:0016126)
0.1 0.3 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.1 0.4 GO:0051176 positive regulation of sulfur metabolic process(GO:0051176)
0.1 3.1 GO:0006829 zinc II ion transport(GO:0006829)
0.1 0.3 GO:0010028 xanthophyll cycle(GO:0010028)
0.1 0.3 GO:0072337 modified amino acid transport(GO:0072337)
0.1 0.3 GO:0017145 stem cell division(GO:0017145)
0.1 0.4 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.1 0.8 GO:0048654 anther morphogenesis(GO:0048654) anther wall tapetum morphogenesis(GO:0048655)
0.1 0.5 GO:0000187 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.1 0.7 GO:0080190 lateral growth(GO:0080190)
0.1 0.3 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.1 0.6 GO:0046443 FAD metabolic process(GO:0046443)
0.1 0.3 GO:0048479 style development(GO:0048479)
0.1 0.3 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.1 1.3 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 0.6 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.1 0.3 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.1 0.2 GO:0048451 petal formation(GO:0048451)
0.1 0.2 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.1 0.6 GO:0046900 tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.1 0.2 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.1 1.2 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 0.5 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.1 2.3 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.1 0.4 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.1 0.2 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.1 0.6 GO:0072659 protein localization to plasma membrane(GO:0072659)
0.1 2.0 GO:0042335 cuticle development(GO:0042335)
0.1 0.3 GO:0050792 regulation of viral process(GO:0050792)
0.1 1.0 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.1 0.6 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 0.8 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.1 0.3 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.1 0.4 GO:0051103 lagging strand elongation(GO:0006273) DNA ligation involved in DNA repair(GO:0051103)
0.1 0.3 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.3 GO:0010422 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.1 0.5 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 0.4 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.1 1.3 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.1 1.0 GO:0009704 de-etiolation(GO:0009704)
0.1 3.5 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.1 0.3 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.1 0.2 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 0.5 GO:2001289 lipid X metabolic process(GO:2001289)
0.1 1.0 GO:0015743 malate transport(GO:0015743)
0.1 0.6 GO:0046620 regulation of organ growth(GO:0046620)
0.1 0.7 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.1 1.0 GO:0060688 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.1 0.3 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.2 GO:0000023 maltose metabolic process(GO:0000023)
0.0 0.5 GO:0009901 anther dehiscence(GO:0009901)
0.0 1.1 GO:0010167 response to nitrate(GO:0010167)
0.0 0.2 GO:0019474 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.0 0.3 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 1.0 GO:0002213 defense response to insect(GO:0002213)
0.0 0.2 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.0 0.2 GO:0051865 protein autoubiquitination(GO:0051865)
0.0 0.2 GO:0010500 transmitting tissue development(GO:0010500)
0.0 0.3 GO:1901957 regulation of cutin biosynthetic process(GO:1901957) positive regulation of cutin biosynthetic process(GO:1901959)
0.0 0.1 GO:0048446 petal morphogenesis(GO:0048446)
0.0 0.4 GO:0080086 stamen filament development(GO:0080086)
0.0 0.8 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.1 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.0 0.3 GO:0010230 alternative respiration(GO:0010230)
0.0 0.3 GO:0046865 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865)
0.0 0.5 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.4 GO:0080027 response to herbivore(GO:0080027)
0.0 0.2 GO:0019419 sulfate reduction(GO:0019419)
0.0 2.7 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.2 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.0 1.9 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 1.1 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.5 GO:1990414 replication-born double-strand break repair via sister chromatid exchange(GO:1990414)
0.0 1.4 GO:0010927 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.0 0.2 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.5 GO:0010274 hydrotropism(GO:0010274)
0.0 0.5 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 1.5 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.1 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.0 0.2 GO:1904961 quiescent center organization(GO:1904961)
0.0 0.2 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.0 0.2 GO:0009268 response to pH(GO:0009268)
0.0 0.8 GO:0045493 xylan catabolic process(GO:0045493)
0.0 3.2 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.5 GO:0006030 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.1 GO:0001120 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.0 0.8 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.3 GO:0016584 nucleosome positioning(GO:0016584) negative regulation of chromatin silencing(GO:0031936)
0.0 0.2 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.0 0.3 GO:0010310 regulation of hydrogen peroxide metabolic process(GO:0010310)
0.0 0.2 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.9 GO:0045727 positive regulation of translation(GO:0045727)
0.0 0.2 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.0 0.1 GO:0070509 calcium ion import(GO:0070509)
0.0 0.2 GO:0097034 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.0 0.7 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.0 0.5 GO:0043062 extracellular matrix organization(GO:0030198) extracellular structure organization(GO:0043062)
0.0 0.4 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.1 GO:0030002 cellular anion homeostasis(GO:0030002)
0.0 0.2 GO:0010052 guard cell differentiation(GO:0010052)
0.0 0.1 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.0 0.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.2 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.0 0.3 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.2 GO:0006183 GTP biosynthetic process(GO:0006183)
0.0 0.1 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.0 0.3 GO:0031333 negative regulation of protein complex assembly(GO:0031333)
0.0 0.4 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.0 0.6 GO:0009692 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.2 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.0 0.2 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 0.1 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.0 0.1 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 1.4 GO:0010224 response to UV-B(GO:0010224)
0.0 0.2 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.3 GO:0006102 isocitrate metabolic process(GO:0006102)
0.0 0.0 GO:0034625 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.0 0.1 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754) centromeric sister chromatid cohesion(GO:0070601)
0.0 0.3 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.0 1.5 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.2 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0 0.8 GO:0009407 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.2 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.0 0.1 GO:0051329 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.0 0.3 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 0.2 GO:0007143 female meiotic division(GO:0007143)
0.0 0.8 GO:0051510 regulation of unidimensional cell growth(GO:0051510)
0.0 1.1 GO:0008283 cell proliferation(GO:0008283)
0.0 0.6 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.4 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.0 0.2 GO:0002098 tRNA wobble uridine modification(GO:0002098)
0.0 0.2 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.8 GO:0009846 pollen germination(GO:0009846)
0.0 0.3 GO:0010089 xylem development(GO:0010089)
0.0 0.0 GO:0010266 response to vitamin B1(GO:0010266)
0.0 0.7 GO:0030433 ER-associated ubiquitin-dependent protein catabolic process(GO:0030433) ERAD pathway(GO:0036503)
0.0 0.4 GO:0030050 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.3 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.2 GO:0032366 intracellular sterol transport(GO:0032366)
0.0 0.2 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.2 GO:0051026 chiasma assembly(GO:0051026)
0.0 0.0 GO:0051601 exocyst localization(GO:0051601)
0.0 0.3 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.0 0.1 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.0 0.1 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.3 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.5 GO:0009787 regulation of abscisic acid-activated signaling pathway(GO:0009787)
0.0 0.4 GO:0002239 response to oomycetes(GO:0002239)
0.0 0.1 GO:0080144 amino acid homeostasis(GO:0080144)
0.0 0.3 GO:0032508 DNA duplex unwinding(GO:0032508)
0.0 0.4 GO:0009690 cytokinin metabolic process(GO:0009690)
0.0 0.1 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.0 0.1 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.0 0.1 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.1 GO:0010262 somatic embryogenesis(GO:0010262)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 14.7 GO:0010319 stromule(GO:0010319)
0.2 1.4 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.2 4.8 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.1 0.4 GO:0032432 actin filament bundle(GO:0032432)
0.1 7.0 GO:0010287 plastoglobule(GO:0010287)
0.1 0.3 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.1 1.9 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.3 GO:0005905 clathrin-coated pit(GO:0005905)
0.1 2.0 GO:0045177 apical part of cell(GO:0045177)
0.1 0.3 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.1 0.7 GO:0030139 endocytic vesicle(GO:0030139)
0.1 0.5 GO:0030893 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.1 0.8 GO:0030131 clathrin adaptor complex(GO:0030131)
0.1 0.9 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.1 0.3 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 1.1 GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain(GO:0033178)
0.0 0.2 GO:0009897 external side of plasma membrane(GO:0009897)
0.0 0.5 GO:1902562 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 5.1 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.4 GO:0009522 photosystem I(GO:0009522)
0.0 0.2 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.0 2.6 GO:0090406 pollen tube(GO:0090406)
0.0 0.4 GO:0030125 clathrin vesicle coat(GO:0030125)
0.0 0.9 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.0 10.1 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.5 GO:0009986 cell surface(GO:0009986)
0.0 0.6 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 6.4 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.8 GO:0045239 tricarboxylic acid cycle enzyme complex(GO:0045239)
0.0 0.1 GO:0009501 amyloplast(GO:0009501)
0.0 0.1 GO:0030897 HOPS complex(GO:0030897)
0.0 0.1 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.0 2.6 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.1 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.3 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.2 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.3 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.1 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 1.5 GO:0005615 extracellular space(GO:0005615)
0.0 37.2 GO:0005576 extracellular region(GO:0005576)
0.0 0.3 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.3 GO:0055028 cortical microtubule(GO:0055028)
0.0 1.2 GO:0010008 endosome membrane(GO:0010008)
0.0 0.3 GO:0031965 nuclear membrane(GO:0031965)
0.0 0.1 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 0.3 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.1 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.0 0.1 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.0 0.1 GO:0031209 SCAR complex(GO:0031209)
0.0 0.2 GO:0000145 exocyst(GO:0000145)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.4 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.6 1.7 GO:0008909 isochorismate synthase activity(GO:0008909)
0.5 2.7 GO:0050113 inositol oxygenase activity(GO:0050113)
0.5 1.6 GO:0035671 enone reductase activity(GO:0035671)
0.5 2.3 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.5 1.8 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.4 6.3 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.4 3.4 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.4 1.3 GO:0050502 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.4 4.5 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.4 1.6 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.4 2.0 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.4 1.6 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.4 1.2 GO:0004557 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.4 11.3 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.3 1.0 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.3 1.3 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.3 0.9 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.2 2.7 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.2 0.7 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.2 0.7 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.2 1.6 GO:0019825 oxygen binding(GO:0019825)
0.2 0.6 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.2 1.3 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.2 0.6 GO:0000248 C-5 sterol desaturase activity(GO:0000248)
0.2 1.9 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.2 0.6 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.2 1.8 GO:0009922 fatty acid elongase activity(GO:0009922)
0.2 0.8 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.2 3.8 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.2 1.5 GO:0009916 alternative oxidase activity(GO:0009916)
0.2 0.9 GO:0004333 fumarate hydratase activity(GO:0004333)
0.2 0.5 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.2 0.7 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.2 4.7 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.2 0.5 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.2 1.0 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.2 0.7 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.2 0.5 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.2 0.8 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.2 0.8 GO:0003785 actin monomer binding(GO:0003785)
0.2 0.9 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.2 0.5 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.2 0.5 GO:0010242 oxygen evolving activity(GO:0010242)
0.2 1.5 GO:0004806 triglyceride lipase activity(GO:0004806)
0.2 0.6 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.1 0.4 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.1 0.7 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.3 GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen(GO:0016713)
0.1 2.3 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.1 0.8 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.5 GO:0004445 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.1 0.7 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.1 3.2 GO:0016168 chlorophyll binding(GO:0016168)
0.1 1.0 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 0.4 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.1 1.8 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.1 0.5 GO:0052594 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.1 0.4 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.1 0.3 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.1 0.8 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.1 0.3 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.1 0.5 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 1.8 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.1 0.6 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.1 1.8 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 0.9 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.1 1.3 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 0.6 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.1 0.3 GO:0015292 uniporter activity(GO:0015292)
0.1 0.5 GO:0015368 calcium:cation antiporter activity(GO:0015368)
0.1 0.6 GO:0004834 tryptophan synthase activity(GO:0004834)
0.1 2.1 GO:0010333 terpene synthase activity(GO:0010333)
0.1 0.4 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 0.3 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.1 1.5 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.1 0.6 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 0.6 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.5 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.1 0.2 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.1 0.4 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.1 0.3 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.4 GO:0008430 selenium binding(GO:0008430)
0.1 1.8 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.7 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 0.8 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.1 0.3 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.1 0.6 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 1.8 GO:0010427 abscisic acid binding(GO:0010427)
0.1 0.2 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.1 0.5 GO:0016161 beta-amylase activity(GO:0016161)
0.1 0.3 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.1 0.4 GO:0008131 primary amine oxidase activity(GO:0008131)
0.1 0.7 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.1 3.9 GO:0004364 glutathione transferase activity(GO:0004364)
0.1 0.3 GO:0016675 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.1 0.7 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.1 0.4 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.1 0.2 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.1 1.2 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.1 2.6 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 0.5 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 0.7 GO:0008061 chitin binding(GO:0008061)
0.1 0.4 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.1 0.4 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.1 0.3 GO:0004441 inositol-1,4-bisphosphate 1-phosphatase activity(GO:0004441)
0.1 0.2 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.1 0.2 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.1 0.4 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.6 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 0.3 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 0.6 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.3 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.1 1.4 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 1.6 GO:0005179 hormone activity(GO:0005179)
0.0 1.2 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 1.4 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 2.3 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.2 GO:0016748 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.0 0.3 GO:0030332 cyclin binding(GO:0030332)
0.0 0.6 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 2.4 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.2 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.0 0.4 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.6 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 3.1 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.2 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.0 1.7 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.4 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.0 0.9 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.9 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.0 0.1 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.0 1.0 GO:0008810 cellulase activity(GO:0008810)
0.0 0.3 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.0 0.1 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.9 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.3 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.0 0.4 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 0.0 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
0.0 0.2 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.0 0.2 GO:0042299 lupeol synthase activity(GO:0042299)
0.0 0.3 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.5 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.5 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.0 1.4 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 2.6 GO:0051213 dioxygenase activity(GO:0051213)
0.0 0.2 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.1 GO:0008460 dTDP-glucose 4,6-dehydratase activity(GO:0008460)
0.0 0.5 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.3 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.7 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.0 0.5 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.5 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.1 GO:0022841 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.0 0.4 GO:0016157 sucrose synthase activity(GO:0016157)
0.0 2.4 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 0.4 GO:0070628 proteasome binding(GO:0070628)
0.0 0.3 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.3 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.1 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.5 GO:0031386 protein tag(GO:0031386)
0.0 1.5 GO:0003777 microtubule motor activity(GO:0003777)
0.0 2.2 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.1 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.1 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.0 0.7 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.1 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 0.8 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.4 GO:0030276 clathrin binding(GO:0030276)
0.0 0.4 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.0 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.0 1.1 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 0.1 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.2 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.4 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.3 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.2 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.2 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.0 0.8 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.4 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.4 GO:0005496 steroid binding(GO:0005496)
0.0 0.0 GO:0010313 phytochrome binding(GO:0010313)
0.0 1.3 GO:0008047 enzyme activator activity(GO:0008047)
0.0 0.0 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.0 0.3 GO:0046943 organic acid transmembrane transporter activity(GO:0005342) carboxylic acid transmembrane transporter activity(GO:0046943)
0.0 0.2 GO:0008066 glutamate receptor activity(GO:0008066)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 11.2 PID CMYB PATHWAY C-MYB transcription factor network
0.3 0.7 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.3 1.8 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.3 0.8 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.2 1.5 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.1 0.3 PID ARF 3PATHWAY Arf1 pathway
0.1 0.1 PID PI3KCI PATHWAY Class I PI3K signaling events
0.1 0.5 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.0 0.1 SA G1 AND S PHASES Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition.
0.0 0.4 PID E2F PATHWAY E2F transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 11.1 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.1 0.1 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.1 0.3 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.1 0.7 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism
0.1 0.5 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.1 0.5 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.1 0.4 REACTOME RECYCLING OF BILE ACIDS AND SALTS Genes involved in Recycling of bile acids and salts
0.1 0.6 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.1 0.3 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.1 0.4 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.1 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.0 0.4 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.0 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor