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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G77920

Z-value: 0.67

Transcription factors associated with AT1G77920

Gene Symbol Gene ID Gene Info
AT1G77920 bZIP transcription factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
TGA7arTal_v1_Chr1_+_29298243_292982430.742.6e-03Click!

Activity profile of AT1G77920 motif

Sorted Z-values of AT1G77920 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_15135169 1.38 AT5G37990.1
S-adenosyl-L-methionine-dependent methyltransferase superfamily protein
Chr2_+_235925 0.98 AT2G01520.1
MLP-like protein 328
Chr1_+_4662698 0.88 AT1G13609.1
AT1G13609.2
Defensin-like (DEFL) family protein
Chr4_+_5448049 0.87 AT4G08555.1
hypothetical protein
Chr2_+_18346306 0.77 AT2G44460.1
beta glucosidase 28
Chr2_+_18347765 0.77 AT2G44460.2
beta glucosidase 28
Chr2_-_15425129 0.75 AT2G36800.1
don-glucosyltransferase 1
Chr1_-_4835089 0.69 AT1G14120.2
AT1G14120.1
AT1G14120.3
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_+_9829261 0.66 AT1G28135.1
hypothetical protein
Chr1_+_28776861 0.63 AT1G76680.2
12-oxophytodienoate reductase 1
Chr1_+_28776626 0.63 AT1G76680.1
12-oxophytodienoate reductase 1
Chr4_+_8107254 0.63 AT4G14060.1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr3_+_5588459 0.61 AT3G16450.3
AT3G16450.1
Mannose-binding lectin superfamily protein
Chr3_-_18373147 0.60 AT3G49570.1
response to low sulfur 3
Chr3_-_4201265 0.60 AT3G13080.2
AT3G13080.4
AT3G13080.3
multidrug resistance-associated protein 3
Chr3_+_5588292 0.60 AT3G16450.2
Mannose-binding lectin superfamily protein
Chr3_-_4201734 0.57 AT3G13080.1
AT3G13080.5
multidrug resistance-associated protein 3
Chr3_+_22804998 0.55 AT3G61630.1
cytokinin response factor 6
Chr3_+_4937172 0.55 AT3G14690.2
AT3G14690.1
cytochrome P450, family 72, subfamily A, polypeptide 15
Chr2_-_13950745 0.55 AT2G32880.2
AT2G32880.1
TRAF-like family protein
Chr3_-_10790553 0.54 AT3G28740.1
Cytochrome P450 superfamily protein
Chr5_+_2513792 0.53 AT5G07870.1
HXXXD-type acyl-transferase family protein
Chr4_+_15202288 0.52 AT4G31330.1
transmembrane protein, putative (Protein of unknown function, DUF599)
Chr1_-_5160179 0.52 AT1G14960.1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr5_+_2511357 0.52 AT5G07860.1
HXXXD-type acyl-transferase family protein
Chr4_+_14348637 0.51 AT4G29110.1
cotton fiber protein
Chr5_+_16579936 0.51 AT5G41410.1
POX (plant homeobox) family protein
Chr5_+_26447642 0.50 AT5G66170.3
AT5G66170.2
AT5G66170.1
sulfurtransferase 18
Chr5_-_13868362 0.50 AT5G35690.1
zinc metalloproteinase-like protein
Chr5_-_1139631 0.49 AT5G04150.2
AT5G04150.1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_-_8175431 0.49 AT5G24150.2
AT5G24150.1
FAD/NAD(P)-binding oxidoreductase family protein
Chr5_+_19434758 0.49 AT5G47990.1
cytochrome P450, family 705, subfamily A, polypeptide 5
Chr4_+_16310768 0.48 AT4G34050.1
AT4G34050.2
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_-_10591546 0.48 AT4G19420.3
AT4G19420.2
AT4G19420.1
Pectinacetylesterase family protein
Chr5_+_16285711 0.48 AT5G40670.1
PQ-loop repeat family protein / transmembrane family protein
Chr5_+_23187840 0.47 AT5G57220.1
cytochrome P450, family 81, subfamily F, polypeptide 2
Chr4_+_16310409 0.47 AT4G34050.3
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_+_17044932 0.47 AT2G40840.1
disproportionating enzyme 2
Chr5_+_23167774 0.47 AT5G57180.1
AT5G57180.2
AT5G57180.4
AT5G57180.3
chloroplast import apparatus 2
Chr5_-_8502224 0.45 AT5G24770.1
AT5G24770.2
vegetative storage protein 2
Chr3_-_2843781 0.45 AT3G09260.1
Glycosyl hydrolase superfamily protein
Chr4_-_18275017 0.45 AT4G39260.4
AT4G39260.3
AT4G39260.2
AT4G39260.1
cold, circadian rhythm, and RNA binding 1
Chr4_+_17243583 0.45 AT4G36540.2
AT4G36540.1
BR enhanced expression 2
Chr5_+_8217191 0.44 AT5G24210.1
AT5G24210.2
AT5G24210.3
alpha/beta-Hydrolases superfamily protein
Chr3_-_18946621 0.44 AT3G51000.1
alpha/beta-Hydrolases superfamily protein
Chr1_-_1647147 0.44 AT1G05560.1
UDP-glucosyltransferase 75B1
Chr5_+_15141650 0.44 AT5G38000.1
AT5G38000.2
AT5G38000.3
Zinc-binding dehydrogenase family protein
Chr1_+_26016024 0.44 AT1G69200.1
fructokinase-like protein
Chr3_+_4924777 0.43 AT3G14660.3
AT3G14660.1
AT3G14660.2
cytochrome P450, family 72, subfamily A, polypeptide 13
Chr2_+_16452612 0.43 AT2G39400.2
AT2G39400.1
alpha/beta-Hydrolases superfamily protein
Chr5_-_23367063 0.43 AT5G57685.1
glutamine dumper 3
Chr1_+_25508639 0.42 AT1G68050.1
flavin-binding, kelch repeat, f box 1
Chr1_-_1647435 0.42 AT1G05560.2
UDP-glucosyltransferase 75B1
Chr1_-_19161552 0.42 AT1G51680.3
AT1G51680.2
4-coumarate:CoA ligase 1
Chr5_-_13859013 0.41 AT5G35680.3
AT5G35680.2
AT5G35680.1
Nucleic acid-binding, OB-fold-like protein
Chr4_-_12393982 0.41 AT4G23810.1
WRKY family transcription factor
Chr3_-_16914131 0.41 AT3G46030.1
Histone superfamily protein
Chr5_-_8181107 0.40 AT5G24155.2
AT5G24155.3
AT5G24155.1
FAD/NAD(P)-binding oxidoreductase family protein
Chr5_+_1153740 0.40 AT5G04200.1
metacaspase 9
Chr4_-_9488397 0.40 AT4G16870.1

Chr5_-_19172956 0.40 AT5G47220.1
ethylene responsive element binding factor 2
Chr5_+_6833564 0.40 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
Raffinose synthase family protein
Chr4_-_11659105 0.39 AT4G21990.1
AT4G21990.2
APS reductase 3
Chr3_-_6172005 0.39 AT3G18035.1
AT3G18035.2
winged-helix DNA-binding transcription factor family protein
Chr1_-_28284036 0.39 AT1G75380.3
AT1G75380.1
AT1G75380.2
AT1G75380.4
bifunctional nuclease in basal defense response 1
Chr5_-_8358546 0.39 AT5G24470.1
two-component response regulator-like protein
Chr5_+_9226079 0.39 AT5G26290.1
TRAF-like family protein
Chr1_-_3590928 0.39 AT1G10760.1
AT1G10760.3
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein
Chr5_-_8559488 0.39 AT5G24890.1
stress response NST1-like protein
Chr5_+_25524045 0.38 AT5G63780.2
RING/FYVE/PHD zinc finger superfamily protein
Chr1_+_17123785 0.38 AT1G45201.3
AT1G45201.1
AT1G45201.2
triacylglycerol lipase-like 1
Chr1_-_19161737 0.38 AT1G51680.1
4-coumarate:CoA ligase 1
Chr4_+_11762233 0.38 AT4G22230.1
AT4G22230.2
defensin-like protein
Chr1_-_662456 0.38 AT1G02930.2
AT1G02930.1
glutathione S-transferase 6
Chr3_+_1172687 0.38 AT3G04420.2
AT3G04420.1
NAC domain containing protein 48
Chr5_-_25698971 0.38 AT5G64250.1
Aldolase-type TIM barrel family protein
Chr1_-_26591715 0.38 AT1G70530.2
AT1G70530.3
AT1G70530.1
cysteine-rich RLK (RECEPTOR-like protein kinase) 3
Chr1_-_29474003 0.37 AT1G78340.1
glutathione S-transferase TAU 22
Chr4_-_13241537 0.37 AT4G26130.1
cotton fiber protein
Chr4_-_16703486 0.37 AT4G35090.3
AT4G35090.1
catalase 2
Chr5_+_630748 0.37 AT5G02780.1
AT5G02780.3
AT5G02780.2
glutathione transferase lambda 1
Chr3_+_22216540 0.37 AT3G60140.2
AT3G60140.1
Glycosyl hydrolase superfamily protein
Chr4_-_16703286 0.37 AT4G35090.2
catalase 2
Chr2_+_16596838 0.37 AT2G39795.1
Mitochondrial glycoprotein family protein
Chr1_-_26293173 0.37 AT1G69830.1
alpha-amylase-like 3
Chr5_+_20415764 0.36 AT5G50160.1
AT5G50160.2
ferric reduction oxidase 8
Chr5_+_26266180 0.36 AT5G65690.1
AT5G65690.2
AT5G65690.3
AT5G65690.4
phosphoenolpyruvate carboxykinase 2
Chr1_+_24127506 0.36 AT1G64950.1
cytochrome P450, family 89, subfamily A, polypeptide 5
Chr5_+_25523827 0.36 AT5G63780.1
RING/FYVE/PHD zinc finger superfamily protein
Chr4_-_10590700 0.36 AT4G19420.4
Pectinacetylesterase family protein
Chr1_-_28251469 0.36 AT1G75270.1
dehydroascorbate reductase 2
Chr1_-_19225690 0.36 AT1G51805.2
AT1G51805.1
Leucine-rich repeat protein kinase family protein
Chr2_+_12666935 0.36 AT2G29630.3
AT2G29630.2
AT2G29630.1
thiaminC
Chr3_+_19168672 0.36 AT3G51670.1
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Chr3_-_162905 0.36 AT3G01420.1
Peroxidase superfamily protein
Chr4_+_16810482 0.36 AT4G35350.2
AT4G35350.1
xylem cysteine peptidase 1
Chr2_+_8644369 0.36 AT2G20020.1
RNA-binding CRS1 / YhbY (CRM) domain-containing protein
Chr5_-_25699255 0.36 AT5G64250.2
Aldolase-type TIM barrel family protein
Chr1_+_2238017 0.36 AT1G07280.1
AT1G07280.2
AT1G07280.4
AT1G07280.3
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_-_6710856 0.35 AT2G15390.1
fucosyltransferase 4
Chr4_+_10773804 0.35 AT4G19840.1
phloem protein 2-A1
Chr3_-_7463525 0.35 AT3G21250.1
AT3G21250.6
AT3G21250.5
AT3G21250.3
AT3G21250.2
AT3G21250.4
multidrug resistance-associated protein 6
Chr1_+_418726 0.35 AT1G02205.4
AT1G02205.3
AT1G02205.5
AT1G02205.1
Fatty acid hydroxylase superfamily
Chr1_-_11548016 0.35 AT1G32100.1
pinoresinol reductase 1
Chr2_+_17927181 0.35 AT2G43120.2
AT2G43120.1
RmlC-like cupins superfamily protein
Chr5_+_4756057 0.35 AT5G14730.1
hypothetical protein
Chr1_-_22249721 0.35 AT1G60390.1
polygalacturonase 1
Chr3_-_9597927 0.35 AT3G26220.1
cytochrome P450, family 71, subfamily B, polypeptide 3
Chr2_-_13946790 0.34 AT2G32870.1
AT2G32870.2
TRAF-like family protein
Chr5_-_23681935 0.34 AT5G58590.1
RAN binding protein 1
Chr2_+_11488988 0.34 AT2G26920.1
Ubiquitin-associated/translation elongation factor EF1B protein
Chr3_-_20837160 0.34 AT3G56150.2
AT3G56150.1
eukaryotic translation initiation factor 3C
Chr5_-_25528013 0.34 AT5G63790.1
NAC domain containing protein 102
Chr5_-_17893067 0.34 AT5G44410.1
FAD-binding Berberine family protein
Chr4_-_9525691 0.34 AT4G16920.2
AT4G16920.3
AT4G16920.6
AT4G16920.5
AT4G16920.8
AT4G16920.9
AT4G16920.1
AT4G16920.4
AT4G16920.7
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_-_3590701 0.34 AT1G10760.2
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein
Chr5_-_2995675 0.34 AT5G09660.5
AT5G09660.4
AT5G09660.1
peroxisomal NAD-malate dehydrogenase 2
Chr5_+_15634444 0.34 AT5G39050.1
HXXXD-type acyl-transferase family protein
Chr3_-_17401871 0.34 AT3G47250.3
AT3G47250.2
transmembrane protein, putative (DUF247)
Chr5_-_2995307 0.33 AT5G09660.2
peroxisomal NAD-malate dehydrogenase 2
Chr5_-_14238026 0.33 AT5G36170.4
AT5G36170.2
AT5G36170.3
AT5G36170.1
high chlorophyll fluorescent 109
Chr3_+_6191461 0.33 AT3G18080.1
B-S glucosidase 44
Chr5_-_2995512 0.33 AT5G09660.3
peroxisomal NAD-malate dehydrogenase 2
Chr2_-_15419391 0.33 AT2G36780.1
UDP-Glycosyltransferase superfamily protein
Chr2_+_15257418 0.33 AT2G36380.1
pleiotropic drug resistance 6
Chr5_-_24663139 0.33 AT5G61340.1
AT5G61340.2
transmembrane protein
Chr5_-_22133688 0.33 AT5G54510.1
Auxin-responsive GH3 family protein
Chr5_-_22764576 0.33 AT5G56240.1
AT5G56240.3
AT5G56240.2
hapless protein
Chr3_-_20442650 0.33 AT3G55150.1
exocyst subunit exo70 family protein H1
Chr1_+_20912116 0.33 AT1G55920.1
serine acetyltransferase 2;1
Chr2_-_16850487 0.33 AT2G40340.3
AT2G40340.1
AT2G40340.2
AT2G40340.5
AT2G40340.6
AT2G40340.4
Integrase-type DNA-binding superfamily protein
Chr1_-_17285749 0.32 AT1G47128.1
Granulin repeat cysteine protease family protein
Chr4_-_6699199 0.32 AT4G10920.2
AT4G10920.1
transcriptional coactivator p15 (PC4) family protein (KELP)
Chr1_-_23667372 0.32 AT1G63780.1
Ribosomal RNA processing Brix domain protein
Chr5_-_7377667 0.32 AT5G22290.2
AT5G22290.1
NAC domain containing protein 89
Chr1_+_24123789 0.32 AT1G64940.1
cytochrome P450, family 87, subfamily A, polypeptide 6
Chr3_+_302472 0.32 AT3G01860.2
AT3G01860.1
hypothetical protein
Chr1_+_25781801 0.32 AT1G68670.1
myb-like transcription factor family protein
Chr2_+_10379948 0.32 AT2G24420.1
AT2G24420.2
DNA repair ATPase-like protein
Chr2_+_18364652 0.32 AT2G44490.1
Glycosyl hydrolase superfamily protein
Chr5_+_16893849 0.32 AT5G42250.1
Zinc-binding alcohol dehydrogenase family protein
Chr1_+_4137511 0.32 AT1G12200.1
AT1G12200.2
Flavin-binding monooxygenase family protein
Chr2_-_19114173 0.32 AT2G46550.3
AT2G46550.1
AT2G46550.2
transmembrane protein
Chr5_-_24836933 0.32 AT5G61820.1
AT5G61820.2
stress up-regulated Nod 19 protein
Chr1_+_11396402 0.31 AT1G31800.1
cytochrome P450, family 97, subfamily A, polypeptide 3
Chr2_+_12667901 0.31 AT2G29630.4
thiaminC
Chr3_+_8436436 0.31 AT3G23530.1
Cyclopropane-fatty-acyl-phospholipid synthase
Chr5_-_8444101 0.31 AT5G24660.1
response to low sulfur 2
Chr5_-_26920179 0.31 AT5G67450.1
zinc-finger protein 1
Chr5_-_23236572 0.31 AT5G57350.2
AT5G57350.4
AT5G57350.1
H[+]-ATPase 3
Chr1_-_5236886 0.31 AT1G15210.1
pleiotropic drug resistance 7
Chr3_+_23452808 0.31 AT3G63520.1
carotenoid cleavage dioxygenase 1
Chr2_+_6758430 0.30 AT2G15480.1
UDP-glucosyl transferase 73B5
Chr5_+_16852628 0.30 AT5G42180.1
Peroxidase superfamily protein
Chr2_-_6711156 0.30 AT2G15390.2
fucosyltransferase 4
Chr2_-_18778374 0.30 AT2G45560.3
AT2G45560.2
cytochrome P450, family 76, subfamily C, polypeptide 1
Chr4_-_10698792 0.30 AT4G19660.2
AT4G19660.1
NPR1-like protein 4
Chr3_-_17306633 0.30 AT3G46970.1
alpha-glucan phosphorylase 2
Chr1_-_3338084 0.30 AT1G10170.4
AT1G10170.2
AT1G10170.1
NF-X-like 1
Chr3_-_1063103 0.30 AT3G04070.2
AT3G04070.1
NAC domain containing protein 47
Chr3_+_22494739 0.30 AT3G60880.2
AT3G60880.1
dihydrodipicolinate synthase 1
Chr3_-_1832190 0.30 AT3G06070.1
hypothetical protein
Chr4_+_12006986 0.30 AT4G22890.3
AT4G22890.4
AT4G22890.5
AT4G22890.1
AT4G22890.2
PGR5-LIKE A
Chr1_-_26415258 0.30 AT1G70140.1
formin 8
Chr1_+_25493193 0.30 AT1G68010.1
AT1G68010.2
AT1G68010.3
hydroxypyruvate reductase
Chr5_-_8186662 0.30 AT5G24160.2
AT5G24160.1
squalene monooxygenase 6
Chr4_+_17346805 0.30 AT4G36820.1
calcium uniporter (DUF607)
Chr1_+_29391630 0.30 AT1G78110.1
nucleolar GTP-binding protein
Chr3_-_10129937 0.29 AT3G27360.1
Histone superfamily protein
Chr5_+_17324909 0.29 AT5G43150.1
elongation factor
Chr3_+_22048557 0.29 AT3G59690.2
AT3G59690.1
IQ-domain 13
Chr1_+_7612834 0.29 AT1G21680.1
DPP6 N-terminal domain-like protein
Chr1_-_19356901 0.29 AT1G52050.1
Mannose-binding lectin superfamily protein
Chr4_+_2324878 0.29 AT4G04610.1
APS reductase 1
Chr3_-_9599988 0.29 AT3G26230.1
cytochrome P450, family 71, subfamily B, polypeptide 24
Chr1_+_30323882 0.29 AT1G80680.1
SUPPRESSOR OF AUXIN RESISTANCE 3
Chr1_+_10507533 0.29 AT1G29990.1
prefoldin 6
Chr3_-_6457509 0.29 AT3G18750.1
AT3G18750.6
AT3G18750.3
AT3G18750.4
with no lysine (K) kinase 6
Chr1_-_23104756 0.29 AT1G62420.1
DUF506 family protein (DUF506)
Chr1_+_30241452 0.29 AT1G80440.1
Galactose oxidase/kelch repeat superfamily protein
Chr4_+_9560078 0.29 AT4G16990.16
AT4G16990.17
AT4G16990.1
AT4G16990.3
AT4G16990.4
disease resistance protein (TIR-NBS class)
Chr5_-_23501416 0.29 AT5G58070.1
temperature-induced lipocalin
Chr2_+_16556801 0.29 AT2G39705.1
ROTUNDIFOLIA like 8
Chr5_+_25623952 0.29 AT5G64030.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_23842860 0.29 AT5G59050.4
AT5G59050.1
AT5G59050.3
G patch domain protein
Chr3_-_17401696 0.29 AT3G47250.1
transmembrane protein, putative (DUF247)
Chr2_-_15729170 0.29 AT2G37460.1
nodulin MtN21 /EamA-like transporter family protein
Chr3_-_17506124 0.29 AT3G47500.1
cycling DOF factor 3
Chr5_-_25528281 0.29 AT5G63790.2
NAC domain containing protein 102
Chr2_+_18328322 0.29 AT2G44410.1
RING/U-box superfamily protein
Chr5_-_2176446 0.29 AT5G07010.1
sulfotransferase 2A
Chr5_+_1461786 0.29 AT5G04960.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_+_8321611 0.28 AT1G23440.1
AT1G23440.2
AT1G23440.3
Peptidase C15, pyroglutamyl peptidase I-like protein
Chr3_-_1776840 0.28 AT3G05937.1
hypothetical protein
Chr5_-_8079866 0.28 AT5G23940.1
HXXXD-type acyl-transferase family protein
Chr1_+_10974383 0.28 AT1G30840.1
AT1G30840.2
purine permease 4
Chr3_-_22907958 0.28 AT3G61880.1
AT3G61880.2
cytochrome p450 78a9
Chr1_+_27148261 0.28 AT1G72150.1
PATELLIN 1
Chr5_-_20878464 0.28 AT5G51390.1
hypothetical protein
Chr1_+_6945695 0.28 AT1G20030.1
Pathogenesis-related thaumatin superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G77920

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.3 1.0 GO:0080093 regulation of photorespiration(GO:0080093)
0.2 0.6 GO:0010266 response to vitamin B1(GO:0010266)
0.2 2.1 GO:0009610 response to symbiotic fungus(GO:0009610)
0.2 0.2 GO:0007063 regulation of sister chromatid cohesion(GO:0007063)
0.2 1.1 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.2 0.8 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.1 0.7 GO:0010731 protein glutathionylation(GO:0010731)
0.1 0.7 GO:0019419 sulfate reduction(GO:0019419)
0.1 0.5 GO:0080003 thalianol metabolic process(GO:0080003)
0.1 0.6 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.1 0.5 GO:0000023 maltose metabolic process(GO:0000023)
0.1 0.3 GO:0031506 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
0.1 0.3 GO:0016118 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.1 0.6 GO:1902884 positive regulation of response to oxidative stress(GO:1902884)
0.1 0.6 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.3 GO:0033240 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.1 1.3 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.1 0.4 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.1 0.1 GO:0010055 atrichoblast differentiation(GO:0010055)
0.1 0.4 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.1 0.3 GO:0006059 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.1 0.2 GO:1900369 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.1 0.2 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.1 0.9 GO:0080144 amino acid homeostasis(GO:0080144)
0.1 0.7 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 0.2 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.1 0.4 GO:0009662 etioplast organization(GO:0009662)
0.1 0.6 GO:0031936 nucleosome positioning(GO:0016584) negative regulation of chromatin silencing(GO:0031936)
0.1 0.1 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.1 0.2 GO:0045002 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.1 0.4 GO:0043447 alkane biosynthetic process(GO:0043447)
0.1 0.4 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.1 0.3 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.1 0.5 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.1 0.5 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.1 0.5 GO:0072337 modified amino acid transport(GO:0072337)
0.1 0.2 GO:0000050 urea cycle(GO:0000050)
0.1 0.2 GO:0048255 mRNA stabilization(GO:0048255)
0.1 0.2 GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process(GO:1990116)
0.1 0.1 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.1 0.2 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.1 0.3 GO:0005980 glycogen catabolic process(GO:0005980)
0.1 0.4 GO:2000037 regulation of stomatal complex patterning(GO:2000037)
0.1 0.2 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.1 0.2 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.1 0.2 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.1 0.2 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.1 0.3 GO:0060969 negative regulation of gene silencing(GO:0060969)
0.1 0.2 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.1 1.4 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.1 0.3 GO:0009590 detection of gravity(GO:0009590)
0.1 0.3 GO:0051098 regulation of binding(GO:0051098)
0.1 0.3 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.1 0.3 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.1 0.6 GO:0010822 positive regulation of mitochondrion organization(GO:0010822)
0.1 0.3 GO:0006805 xenobiotic metabolic process(GO:0006805) cellular response to xenobiotic stimulus(GO:0071466)
0.1 0.3 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.1 0.4 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 0.2 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.0 0.2 GO:0016139 glycoside catabolic process(GO:0016139)
0.0 0.5 GO:0010310 regulation of hydrogen peroxide metabolic process(GO:0010310)
0.0 0.2 GO:1902315 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.0 1.9 GO:0016145 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.0 0.0 GO:0032351 negative regulation of hormone metabolic process(GO:0032351)
0.0 0.1 GO:0090549 response to carbon starvation(GO:0090549)
0.0 0.1 GO:0046104 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.0 0.1 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.0 0.1 GO:0055078 sodium ion homeostasis(GO:0055078)
0.0 0.1 GO:0098532 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.0 0.1 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.0 0.2 GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000472) endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000480)
0.0 0.2 GO:0009558 embryo sac cellularization(GO:0009558)
0.0 0.2 GO:0010271 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.0 1.9 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.2 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.0 0.9 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.0 0.6 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 0.8 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.2 GO:0060148 positive regulation of posttranscriptional gene silencing(GO:0060148)
0.0 0.1 GO:0010377 guard cell fate commitment(GO:0010377) regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.0 0.3 GO:0046900 tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.0 0.2 GO:0090172 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.0 0.4 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.7 GO:0098754 detoxification(GO:0098754)
0.0 0.2 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.0 0.2 GO:0043473 pigmentation(GO:0043473) pigment accumulation(GO:0043476) pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.0 0.3 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.0 0.2 GO:0019323 pentose catabolic process(GO:0019323)
0.0 0.2 GO:0006517 protein deglycosylation(GO:0006517)
0.0 0.1 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.0 0.3 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.0 1.3 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.2 GO:0006777 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.0 0.1 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.0 0.4 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.2 GO:0060919 auxin influx(GO:0060919)
0.0 0.9 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.0 0.2 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.0 0.1 GO:0006741 NADP biosynthetic process(GO:0006741)
0.0 0.1 GO:0010185 regulation of cellular defense response(GO:0010185)
0.0 0.2 GO:0005513 detection of calcium ion(GO:0005513)
0.0 0.3 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.3 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.0 0.1 GO:0071323 cellular response to chitin(GO:0071323)
0.0 0.2 GO:0010135 ureide metabolic process(GO:0010135) ureide catabolic process(GO:0010136)
0.0 0.2 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.0 0.3 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.2 GO:0010338 leaf formation(GO:0010338)
0.0 0.3 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.0 0.2 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.0 0.2 GO:0009061 anaerobic respiration(GO:0009061)
0.0 0.1 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.0 0.1 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.0 0.6 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.3 GO:0060260 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.0 0.2 GO:0042659 regulation of cell fate specification(GO:0042659)
0.0 0.1 GO:0010454 negative regulation of cell fate commitment(GO:0010454) regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.0 0.3 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.0 1.3 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.1 GO:0071569 protein ufmylation(GO:0071569)
0.0 0.1 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.0 0.1 GO:0015692 lead ion transport(GO:0015692)
0.0 0.3 GO:0010363 regulation of plant-type hypersensitive response(GO:0010363)
0.0 0.1 GO:0009871 detection of ethylene stimulus(GO:0009727) jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway(GO:0009871)
0.0 0.4 GO:0006415 translational termination(GO:0006415)
0.0 0.4 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.0 0.2 GO:0016444 somatic cell DNA recombination(GO:0016444)
0.0 1.3 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.0 0.2 GO:0046835 carbohydrate phosphorylation(GO:0046835)
0.0 0.4 GO:0005983 starch catabolic process(GO:0005983)
0.0 0.1 GO:0045332 phospholipid translocation(GO:0045332)
0.0 0.1 GO:0016578 histone deubiquitination(GO:0016578)
0.0 0.2 GO:0009684 indoleacetic acid biosynthetic process(GO:0009684)
0.0 0.1 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.0 0.2 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 0.2 GO:0046688 response to copper ion(GO:0046688)
0.0 0.2 GO:0009554 megasporogenesis(GO:0009554)
0.0 0.2 GO:0002764 immune response-regulating signaling pathway(GO:0002764)
0.0 0.1 GO:0006446 regulation of translational initiation(GO:0006446)
0.0 0.4 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.2 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.0 0.2 GO:0006771 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.0 0.2 GO:0044804 nucleophagy(GO:0044804)
0.0 0.2 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.1 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.1 GO:0009099 valine biosynthetic process(GO:0009099)
0.0 0.1 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.0 0.3 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 0.1 GO:1901562 response to paraquat(GO:1901562)
0.0 0.1 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.0 0.1 GO:0050792 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of viral process(GO:0050792)
0.0 0.1 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.0 0.1 GO:0006680 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.0 0.2 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.0 0.2 GO:1900457 regulation of brassinosteroid mediated signaling pathway(GO:1900457)
0.0 0.5 GO:0019319 hexose biosynthetic process(GO:0019319)
0.0 0.3 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.1 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.0 0.3 GO:0046451 lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 0.1 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.1 GO:1902025 nitrate import(GO:1902025)
0.0 0.3 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.4 GO:0010037 response to carbon dioxide(GO:0010037)
0.0 0.2 GO:0006308 DNA catabolic process(GO:0006308)
0.0 0.1 GO:1901004 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.0 0.2 GO:0046654 tetrahydrofolate biosynthetic process(GO:0046654)
0.0 0.4 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.0 0.2 GO:0090151 establishment of protein localization to mitochondrial membrane(GO:0090151)
0.0 0.1 GO:0035627 ceramide transport(GO:0035627)
0.0 0.0 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.0 0.3 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.6 GO:0051170 nuclear import(GO:0051170)
0.0 0.1 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.0 GO:0010028 xanthophyll cycle(GO:0010028)
0.0 0.2 GO:0051262 protein tetramerization(GO:0051262)
0.0 0.4 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.3 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.0 0.2 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.0 0.3 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.1 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 0.1 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.0 0.1 GO:0006624 vacuolar protein processing(GO:0006624)
0.0 0.1 GO:0009819 drought recovery(GO:0009819)
0.0 0.2 GO:0010021 glycogen biosynthetic process(GO:0005978) amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.1 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.1 GO:0009303 rRNA transcription(GO:0009303)
0.0 0.4 GO:0031056 regulation of histone modification(GO:0031056)
0.0 0.5 GO:0030004 cellular monovalent inorganic cation homeostasis(GO:0030004) regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.0 0.0 GO:0070536 protein K63-linked deubiquitination(GO:0070536)
0.0 0.1 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.2 GO:0031053 primary miRNA processing(GO:0031053)
0.0 0.1 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.0 0.0 GO:0002100 tRNA wobble adenosine to inosine editing(GO:0002100)
0.0 0.2 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.5 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.0 GO:0055089 fatty acid homeostasis(GO:0055089)
0.0 0.1 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.0 0.2 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.2 GO:0032544 plastid translation(GO:0032544)
0.0 0.2 GO:0009785 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.0 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.0 0.3 GO:0035303 regulation of dephosphorylation(GO:0035303)
0.0 0.2 GO:0046348 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.1 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.0 0.0 GO:0070509 calcium ion import(GO:0070509)
0.0 0.3 GO:0007030 Golgi organization(GO:0007030)
0.0 0.1 GO:0045824 negative regulation of innate immune response(GO:0045824)
0.0 0.1 GO:0051050 positive regulation of transport(GO:0051050)
0.0 0.1 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.0 0.1 GO:0000719 photoreactive repair(GO:0000719)
0.0 0.0 GO:0046622 positive regulation of organ growth(GO:0046622)
0.0 0.4 GO:0048510 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.7 GO:0006090 pyruvate metabolic process(GO:0006090)
0.0 0.3 GO:0000959 mitochondrial RNA metabolic process(GO:0000959)
0.0 1.2 GO:0009698 phenylpropanoid metabolic process(GO:0009698)
0.0 0.0 GO:0040030 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.0 0.2 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0034457 Mpp10 complex(GO:0034457)
0.1 0.4 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.2 GO:1990112 RQC complex(GO:1990112)
0.1 0.4 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.1 0.6 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.1 0.4 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.0 0.1 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.0 0.4 GO:0010168 ER body(GO:0010168)
0.0 0.2 GO:0005776 autophagosome(GO:0005776)
0.0 0.6 GO:0000786 nucleosome(GO:0000786)
0.0 0.1 GO:0030093 chloroplast photosystem I(GO:0030093)
0.0 0.3 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.2 GO:0000796 condensin complex(GO:0000796)
0.0 0.2 GO:0045254 pyruvate dehydrogenase complex(GO:0045254)
0.0 0.1 GO:0018444 translation release factor complex(GO:0018444)
0.0 0.2 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.4 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.3 GO:0016272 prefoldin complex(GO:0016272)
0.0 0.6 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.0 0.2 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 1.0 GO:0010319 stromule(GO:0010319)
0.0 0.1 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.0 0.1 GO:0070652 HAUS complex(GO:0070652)
0.0 0.1 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 0.2 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.0 0.2 GO:0048226 Casparian strip(GO:0048226)
0.0 0.1 GO:0005846 nuclear cap binding complex(GO:0005846)
0.0 0.5 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.2 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.3 GO:0030686 90S preribosome(GO:0030686)
0.0 0.3 GO:0031965 nuclear membrane(GO:0031965)
0.0 0.3 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.7 GO:0005764 lysosome(GO:0005764)
0.0 0.2 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.0 0.0 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.0 0.1 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.0 0.1 GO:0032044 DSIF complex(GO:0032044)
0.0 0.1 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.2 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.3 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.2 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.1 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.5 GO:0000145 exocyst(GO:0000145)
0.0 0.1 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.2 GO:0031358 intrinsic component of plastid outer membrane(GO:0031354) integral component of plastid outer membrane(GO:0031355) intrinsic component of chloroplast outer membrane(GO:0031358) integral component of chloroplast outer membrane(GO:0031359)
0.0 0.7 GO:0009524 phragmoplast(GO:0009524)
0.0 0.5 GO:0016592 mediator complex(GO:0016592)
0.0 0.2 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.0 1.7 GO:0000325 plant-type vacuole(GO:0000325)
0.0 0.3 GO:0030863 cortical cytoskeleton(GO:0030863)
0.0 0.1 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.4 GO:0005643 nuclear pore(GO:0005643)
0.0 0.1 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.0 0.1 GO:0009538 photosystem I reaction center(GO:0009538)
0.0 0.1 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 0.1 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.2 GO:0005758 mitochondrial intermembrane space(GO:0005758)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.1 GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.3 0.3 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.3 0.8 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.2 1.0 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.2 0.9 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.2 0.7 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.2 1.4 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.2 1.2 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.2 0.5 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.2 0.8 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.1 0.4 GO:0009924 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.1 0.5 GO:0019172 glyoxalase III activity(GO:0019172)
0.1 1.0 GO:0019137 thioglucosidase activity(GO:0019137)
0.1 0.4 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.1 0.4 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.1 0.3 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.1 0.6 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 0.3 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.1 0.7 GO:0080041 ADP-sugar diphosphatase activity(GO:0019144) ADP-ribose pyrophosphohydrolase activity(GO:0080041)
0.1 0.3 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.1 0.3 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.1 0.4 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.1 0.7 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.1 1.2 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.1 1.1 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.1 0.3 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.1 1.6 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 0.6 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.3 GO:0019776 Atg8 ligase activity(GO:0019776)
0.1 0.7 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.5 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
0.1 0.2 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 0.2 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.1 0.2 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.1 0.5 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.1 0.2 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.1 1.1 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.3 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.1 0.2 GO:0070336 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.1 0.3 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.1 0.5 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.1 0.4 GO:0004567 beta-mannosidase activity(GO:0004567)
0.1 0.2 GO:0004106 chorismate mutase activity(GO:0004106)
0.1 0.5 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.1 0.3 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.1 0.7 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.1 0.5 GO:0004096 catalase activity(GO:0004096)
0.1 0.7 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.1 0.2 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.1 0.2 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.2 GO:0008686 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.1 0.2 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.1 0.3 GO:0036374 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.1 0.2 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 0.4 GO:0030332 cyclin binding(GO:0030332)
0.1 0.2 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.1 0.2 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.0 0.2 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.0 0.3 GO:0022829 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.0 0.4 GO:0097177 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.0 0.4 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.0 0.3 GO:0030619 U1 snRNA binding(GO:0030619)
0.0 0.2 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.0 0.2 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.0 0.3 GO:0030527 structural constituent of chromatin(GO:0030527)
0.0 0.2 GO:0004335 galactokinase activity(GO:0004335)
0.0 0.1 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.0 0.1 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.0 0.1 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.0 0.3 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.2 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.0 0.4 GO:0072349 modified amino acid transmembrane transporter activity(GO:0072349)
0.0 0.1 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.0 0.1 GO:0016856 3-hydroxyacyl-CoA dehydrogenase activity(GO:0003857) racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.0 0.2 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)
0.0 0.2 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.2 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.0 0.2 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.1 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.0 0.1 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 0.4 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.3 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.1 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.0 0.1 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.0 0.3 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 0.2 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.0 0.6 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 1.1 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 0.3 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.3 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.0 0.2 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.0 0.3 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.2 GO:0005047 signal recognition particle binding(GO:0005047)
0.0 0.1 GO:0004174 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.0 1.1 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.2 GO:0004467 long-chain fatty acid-CoA ligase activity(GO:0004467) decanoate--CoA ligase activity(GO:0102391)
0.0 0.1 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.0 0.1 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 1.1 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 1.2 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.4 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.0 0.4 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.0 0.1 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.0 0.1 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.0 0.2 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.2 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.0 0.1 GO:0010313 phytochrome binding(GO:0010313)
0.0 0.3 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.2 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.1 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 0.4 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.8 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.2 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.2 GO:0008199 ferric iron binding(GO:0008199)
0.0 0.1 GO:0003985 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.0 0.1 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.0 0.3 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.1 GO:0004348 glucosylceramidase activity(GO:0004348)
0.0 0.1 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.0 0.1 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.1 GO:0016892 tRNA-intron endonuclease activity(GO:0000213) endoribonuclease activity, producing 3'-phosphomonoesters(GO:0016892)
0.0 0.1 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 0.1 GO:0004766 spermidine synthase activity(GO:0004766)
0.0 0.1 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 0.0 GO:0015292 uniporter activity(GO:0015292)
0.0 0.0 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.0 0.1 GO:0051011 microtubule minus-end binding(GO:0051011)
0.0 0.1 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.0 0.4 GO:0016782 transferase activity, transferring sulfur-containing groups(GO:0016782)
0.0 0.1 GO:0003680 AT DNA binding(GO:0003680)
0.0 2.1 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 0.3 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.0 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.0 0.0 GO:0003996 acyl-CoA ligase activity(GO:0003996)
0.0 0.2 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.0 0.6 GO:0033293 monocarboxylic acid binding(GO:0033293)
0.0 1.1 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.3 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.7 GO:0034062 RNA polymerase activity(GO:0034062)
0.0 0.9 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.1 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 0.1 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.2 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.1 GO:1902387 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.0 0.1 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.0 0.2 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 0.2 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.7 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.0 0.1 GO:0004126 cytidine deaminase activity(GO:0004126)
0.0 0.1 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.0 0.1 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.3 GO:0043022 ribosome binding(GO:0043022)
0.0 0.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.2 GO:0004124 cysteine synthase activity(GO:0004124)
0.0 0.0 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.0 0.0 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.0 0.5 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.2 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.0 0.2 GO:0051117 ATPase binding(GO:0051117)
0.0 0.0 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.0 0.1 GO:0004738 pyruvate dehydrogenase activity(GO:0004738) pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.1 GO:0004003 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.1 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.0 0.1 GO:0008022 protein C-terminus binding(GO:0008022)
0.0 0.1 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.3 GO:0019888 protein phosphatase regulator activity(GO:0019888)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.4 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.1 0.4 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.1 0.4 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 0.2 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network
0.1 0.3 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.0 0.2 PID IL4 2PATHWAY IL4-mediated signaling events
0.0 0.2 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.0 0.4 PID E2F PATHWAY E2F transcription factor network
0.0 0.1 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.0 0.1 PID SHP2 PATHWAY SHP2 signaling
0.0 0.2 PID ATR PATHWAY ATR signaling pathway
0.0 0.1 PID PLK1 PATHWAY PLK1 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 REACTOME RECYCLING OF BILE ACIDS AND SALTS Genes involved in Recycling of bile acids and salts
0.1 0.4 REACTOME INWARDLY RECTIFYING K CHANNELS Genes involved in Inwardly rectifying K+ channels
0.1 0.3 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.1 0.4 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.1 0.2 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.1 0.2 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.0 0.3 REACTOME HOST INTERACTIONS OF HIV FACTORS Genes involved in Host Interactions of HIV factors
0.0 1.0 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.0 0.1 REACTOME DOWNSTREAM SIGNALING OF ACTIVATED FGFR Genes involved in Downstream signaling of activated FGFR
0.0 0.2 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.2 REACTOME PROTEIN FOLDING Genes involved in Protein folding
0.0 0.5 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.0 0.2 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.0 0.2 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.1 REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION Genes involved in Influenza Viral RNA Transcription and Replication