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GSE130291:vernalization in Arabidopsis thaliana
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Results for AT1G75080
Z-value: 0.69
Transcription factors associated with AT1G75080
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
AT1G75080
|
AT1G75080 | Brassinosteroid signaling positive regulator (BZR1) family protein |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| BZR1 | arTal_v1_Chr1_+_28185504_28185504 | -0.72 | 3.8e-03 | Click! |
Activity profile of AT1G75080 motif
Sorted Z-values of AT1G75080 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| Chr1_-_9649323 | 1.09 |
AT1G27730.1
|
STZ
|
salt tolerance zinc finger |
| Chr1_-_23137254 | 1.05 |
AT1G62510.1
|
AT1G62510
|
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| Chr3_-_2130451 | 0.91 |
AT3G06750.1
|
AT3G06750
|
hydroxyproline-rich glycoprotein family protein |
| Chr4_+_11150049 | 0.91 |
AT4G20820.1
|
AT4G20820
|
FAD-binding Berberine family protein |
| Chr1_+_20458952 | 0.88 |
AT1G54870.2
AT1G54870.1 |
AT1G54870
|
NAD(P)-binding Rossmann-fold superfamily protein |
| Chr1_-_19052582 | 0.86 |
AT1G51400.1
|
AT1G51400
|
Photosystem II 5 kD protein |
| Chr4_+_9759203 | 0.86 |
AT4G17500.1
|
ERF-1
|
ethylene responsive element binding factor 1 |
| Chr4_-_14820595 | 0.85 |
AT4G30270.1
|
XTH24
|
xyloglucan endotransglucosylase/hydrolase 24 |
| Chr1_+_3288087 | 0.79 |
AT1G10070.3
AT1G10070.2 AT1G10070.1 |
BCAT-2
|
branched-chain amino acid transaminase 2 |
| Chr1_-_575085 | 0.77 |
AT1G02660.1
|
AT1G02660
|
alpha/beta-Hydrolases superfamily protein |
| Chr2_+_3618058 | 0.73 |
AT2G08986.1
|
AT2G08986
|
hypothetical protein |
| Chr5_+_26573964 | 0.70 |
AT5G66590.1
|
AT5G66590
|
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
| Chr5_+_26266180 | 0.63 |
AT5G65690.1
AT5G65690.2 AT5G65690.3 AT5G65690.4 |
PCK2
|
phosphoenolpyruvate carboxykinase 2 |
| Chr3_+_1172687 | 0.63 |
AT3G04420.2
AT3G04420.1 |
NAC048
|
NAC domain containing protein 48 |
| Chr2_-_17438168 | 0.62 |
AT2G41800.1
|
AT2G41800
|
imidazolonepropionase (Protein of unknown function, DUF642) |
| Chr3_-_9712826 | 0.61 |
AT3G26510.5
AT3G26510.4 AT3G26510.1 AT3G26510.6 |
AT3G26510
|
Octicosapeptide/Phox/Bem1p family protein |
| Chr5_+_7168106 | 0.61 |
AT5G21100.1
|
AT5G21100
|
Plant L-ascorbate oxidase |
| Chr3_-_9712659 | 0.60 |
AT3G26510.3
AT3G26510.7 AT3G26510.2 |
AT3G26510
|
Octicosapeptide/Phox/Bem1p family protein |
| Chr1_-_21063047 | 0.60 |
AT1G56250.1
|
PP2-B14
|
phloem protein 2-B14 |
| Chr1_-_11801407 | 0.59 |
AT1G32640.1
|
MYC2
|
Basic helix-loop-helix (bHLH) DNA-binding family protein |
| Chr1_+_5058583 | 0.58 |
AT1G14700.4
AT1G14700.1 AT1G14700.3 AT1G14700.2 |
PAP3
|
purple acid phosphatase 3 |
| Chr2_+_9840456 | 0.58 |
AT2G23110.1
AT2G23110.2 |
AT2G23110
|
Late embryogenesis abundant protein, group 6 |
| Chr4_+_15230008 | 0.58 |
AT4G31380.1
|
FLP1
|
flowering-promoting factor-like protein |
| Chr4_+_4886962 | 0.57 |
AT4G08040.1
|
ACS11
|
1-aminocyclopropane-1-carboxylate synthase 11 |
| Chr4_+_10375244 | 0.57 |
AT4G18950.1
AT4G18950.2 |
AT4G18950
|
Integrin-linked protein kinase family |
| Chr1_-_18430497 | 0.56 |
AT1G49780.1
|
PUB26
|
plant U-box 26 |
| Chr5_-_442187 | 0.55 |
AT5G02220.1
|
AT5G02220
|
cyclin-dependent kinase inhibitor |
| Chr1_+_10897925 | 0.55 |
AT1G30720.1
|
AT1G30720
|
FAD-binding Berberine family protein |
| Chr3_+_17867131 | 0.54 |
AT3G48240.1
|
AT3G48240
|
Octicosapeptide/Phox/Bem1p family protein |
| Chr5_-_4743512 | 0.53 |
AT5G14700.2
AT5G14700.1 |
AT5G14700
|
NAD(P)-binding Rossmann-fold superfamily protein |
| Chr3_-_20910623 | 0.53 |
AT3G56400.1
|
WRKY70
|
WRKY DNA-binding protein 70 |
| Chr2_-_12634120 | 0.53 |
AT2G29500.1
|
AT2G29500
|
HSP20-like chaperones superfamily protein |
| Chr3_+_16569051 | 0.53 |
AT3G45230.1
|
AT3G45230
|
hydroxyproline-rich glycoprotein family protein |
| Chr2_+_18066960 | 0.52 |
AT2G43510.1
|
TI1
|
trypsin inhibitor protein 1 |
| Chr3_+_9409160 | 0.51 |
AT3G25780.1
|
AOC3
|
allene oxide cyclase 3 |
| Chr3_+_11252807 | 0.51 |
AT3G29320.1
|
PHS1
|
Glycosyl transferase, family 35 |
| Chr1_+_2274926 | 0.49 |
AT1G07400.1
|
AT1G07400
|
HSP20-like chaperones superfamily protein |
| Chr2_+_15050677 | 0.49 |
AT2G35820.1
|
AT2G35820
|
ureidoglycolate hydrolase |
| Chr5_+_1608988 | 0.48 |
AT5G05440.1
|
PYL5
|
Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| Chr2_-_15922321 | 0.48 |
AT2G38050.1
|
DET2
|
3-oxo-5-alpha-steroid 4-dehydrogenase family protein |
| Chr2_+_15050498 | 0.48 |
AT2G35820.2
|
AT2G35820
|
ureidoglycolate hydrolase |
| Chr5_-_23409452 | 0.47 |
AT5G57785.2
|
AT5G57785
|
hypothetical protein |
| Chr1_-_1547798 | 0.47 |
AT1G05300.2
AT1G05300.1 |
ZIP5
|
zinc transporter 5 precursor |
| Chr4_+_1041086 | 0.47 |
AT4G02360.1
|
AT4G02360
|
transmembrane protein, putative (Protein of unknown function, DUF538) |
| Chr1_+_18542061 | 0.46 |
AT1G50040.1
|
AT1G50040
|
formin-like protein, putative (DUF1005) |
| Chr5_-_22759556 | 0.46 |
AT5G56230.1
|
PRA1.G2
|
prenylated RAB acceptor 1.G2 |
| Chr3_-_21008064 | 0.45 |
AT3G56710.1
AT3G56710.2 |
SIB1
|
sigma factor binding protein 1 |
| Chr1_+_22031343 | 0.44 |
AT1G59860.1
|
AT1G59860
|
HSP20-like chaperones superfamily protein |
| Chr4_+_7304323 | 0.43 |
AT4G12290.2
|
AT4G12290
|
Copper amine oxidase family protein |
| Chr5_-_18371021 | 0.43 |
AT5G45340.2
AT5G45340.1 |
CYP707A3
|
cytochrome P450, family 707, subfamily A, polypeptide 3 |
| Chr2_-_12188293 | 0.42 |
AT2G28500.1
|
LBD11
|
LOB domain-containing protein 11 |
| Chr1_-_9935264 | 0.42 |
AT1G28330.3
AT1G28330.2 AT1G28330.4 AT1G28330.1 AT1G28330.6 AT1G28330.5 |
DYL1
|
dormancy-associated protein-like 1 |
| Chr3_-_6436046 | 0.42 |
AT3G18710.1
|
PUB29
|
plant U-box 29 |
| Chr4_+_8913653 | 0.42 |
AT4G15620.1
|
AT4G15620
|
Uncharacterized protein family (UPF0497) |
| Chr3_+_22434864 | 0.42 |
AT3G60690.1
|
AT3G60690
|
SAUR-like auxin-responsive protein family |
| Chr4_-_3950602 | 0.42 |
AT4G06700.1
|
AT4G06700
|
|
| Chr4_+_7303985 | 0.41 |
AT4G12290.1
|
AT4G12290
|
Copper amine oxidase family protein |
| Chr5_-_23409715 | 0.41 |
AT5G57785.1
|
AT5G57785
|
hypothetical protein |
| Chr4_-_17139777 | 0.39 |
AT4G36220.1
|
FAH1
|
ferulic acid 5-hydroxylase 1 |
| Chr1_-_7989217 | 0.39 |
AT1G22600.1
|
AT1G22600
|
Late embryogenesis abundant protein (LEA) family protein |
| Chr2_-_15014147 | 0.37 |
AT2G35710.3
AT2G35710.4 AT2G35710.1 |
PGSIP7
|
Nucleotide-diphospho-sugar transferases superfamily protein |
| Chr1_+_4159227 | 0.37 |
AT1G12250.1
AT1G12250.3 AT1G12250.2 |
AT1G12250
|
Pentapeptide repeat-containing protein |
| Chr1_+_4934120 | 0.37 |
AT1G14430.1
|
AT1G14430
|
glyoxal oxidase-related protein |
| Chr2_+_15553651 | 0.37 |
AT2G37030.1
|
AT2G37030
|
SAUR-like auxin-responsive protein family |
| Chr1_+_19980299 | 0.37 |
AT1G53540.1
|
AT1G53540
|
HSP20-like chaperones superfamily protein |
| Chr2_-_9906032 | 0.36 |
AT2G23290.1
|
MYB70
|
myb domain protein 70 |
| Chr3_-_19731519 | 0.36 |
AT3G53232.1
|
RTFL1
|
ROTUNDIFOLIA like 1 |
| Chr4_-_9437206 | 0.36 |
AT4G16770.1
|
AT4G16770
|
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| Chr1_-_23637577 | 0.36 |
AT1G63720.1
|
AT1G63720
|
hydroxyproline-rich glycoprotein family protein |
| Chr3_+_21238223 | 0.35 |
AT3G57400.1
|
AT3G57400
|
transmembrane protein |
| Chr1_+_28750872 | 0.35 |
AT1G76610.1
|
AT1G76610
|
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) |
| Chr3_-_18883033 | 0.35 |
AT3G50800.1
|
AT3G50800
|
hypothetical protein |
| Chr1_+_568558 | 0.35 |
AT1G02650.2
AT1G02650.1 |
AT1G02650
|
Tetratricopeptide repeat (TPR)-like superfamily protein |
| Chr2_+_17206452 | 0.35 |
AT2G41260.2
AT2G41260.1 |
M17
|
glycine-rich protein / late embryogenesis abundant protein (M17) |
| Chr1_+_24442388 | 0.35 |
AT1G65730.1
|
YSL7
|
YELLOW STRIPE like 7 |
| Chr5_-_21265460 | 0.34 |
AT5G52390.1
|
AT5G52390
|
PAR1 protein |
| Chr3_+_2132758 | 0.34 |
AT3G06760.2
AT3G06760.1 |
AT3G06760
|
Drought-responsive family protein |
| Chr1_-_24183199 | 0.34 |
AT1G65090.2
AT1G65090.1 AT1G65090.3 |
AT1G65090
|
nucleolin |
| Chr3_-_8405289 | 0.34 |
AT3G23440.1
|
EDA6
|
embryo sac development arrest 6 |
| Chr5_-_23414811 | 0.34 |
AT5G57790.2
AT5G57790.1 AT5G57790.3 AT5G57790.4 |
AT5G57790
|
hypothetical protein |
| Chr5_-_25089603 | 0.33 |
AT5G62480.3
AT5G62480.2 AT5G62480.1 |
GSTU9
|
glutathione S-transferase tau 9 |
| Chr3_-_6842856 | 0.33 |
AT3G19690.1
|
AT3G19690
|
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
| Chr3_-_6343178 | 0.33 |
AT3G18485.1
|
ILR2
|
iaa-leucine resistant 2 |
| Chr3_-_222827 | 0.33 |
AT3G01570.1
|
AT3G01570
|
Oleosin family protein |
| Chr2_+_18314188 | 0.32 |
AT2G44340.1
|
AT2G44340
|
VQ motif-containing protein |
| Chr4_-_17797704 | 0.32 |
AT4G37850.2
|
AT4G37850
|
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| Chr5_-_18506382 | 0.32 |
AT5G45630.1
|
AT5G45630
|
senescence regulator (Protein of unknown function, DUF584) |
| Chr2_-_15137012 | 0.32 |
AT2G36050.1
|
OFP15
|
ovate family protein 15 |
| Chr4_-_17797901 | 0.31 |
AT4G37850.1
|
AT4G37850
|
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| Chr5_-_7370295 | 0.31 |
AT5G22260.1
|
MS1
|
RING/FYVE/PHD zinc finger superfamily protein |
| Chr5_-_26096114 | 0.31 |
AT5G65300.1
|
AT5G65300
|
hypothetical protein |
| Chr3_-_2604664 | 0.31 |
AT3G08570.1
|
AT3G08570
|
Phototropic-responsive NPH3 family protein |
| Chr3_-_18666691 | 0.31 |
AT3G50340.1
|
AT3G50340
|
hypothetical protein |
| Chr1_-_21412283 | 0.31 |
AT1G57800.2
AT1G57800.1 |
VIM5
|
zinc finger (C3HC4-type RING finger) family protein |
| Chr1_-_29303519 | 0.31 |
AT1G77932.1
|
AT1G77932
|
FANTASTIC four protein, putative (DUF3049) |
| Chr5_+_8378759 | 0.30 |
AT5G24530.1
|
DMR6
|
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| Chr3_+_5006526 | 0.29 |
AT3G14880.1
AT3G14880.2 |
AT3G14880
|
transcription factor-like protein |
| Chr2_-_11608166 | 0.29 |
AT2G27160.1
|
AT2G27160
|
hypothetical protein |
| Chr2_-_11608416 | 0.29 |
AT2G27160.2
|
AT2G27160
|
hypothetical protein |
| Chr4_+_11228187 | 0.29 |
AT4G21020.1
|
AT4G21020
|
Late embryogenesis abundant protein (LEA) family protein |
| Chr2_-_17810265 | 0.29 |
AT2G42800.1
|
RLP29
|
receptor like protein 29 |
| Chr4_+_12497055 | 0.29 |
AT4G24050.2
AT4G24050.1 |
AT4G24050
|
NAD(P)-binding Rossmann-fold superfamily protein |
| Chr4_+_15101065 | 0.29 |
AT4G30996.1
|
NKS1
|
ubiquitin-associated protein (DUF1068) |
| Chr1_+_120154 | 0.29 |
AT1G01310.1
|
AT1G01310
|
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
| Chr4_+_13586268 | 0.29 |
AT4G27070.1
|
TSB2
|
tryptophan synthase beta-subunit 2 |
| Chr4_+_18519599 | 0.28 |
AT4G39940.1
|
AKN2
|
APS-kinase 2 |
| Chr1_-_970058 | 0.28 |
AT1G03840.2
|
MGP
|
C2H2 and C2HC zinc fingers superfamily protein |
| Chr3_+_2745534 | 0.28 |
AT3G09000.1
|
AT3G09000
|
proline-rich family protein |
| Chr5_+_437365 | 0.28 |
AT5G02200.2
AT5G02200.1 |
FHL
|
far-red-elongated hypocotyl1-like protein |
| Chr5_-_4299264 | 0.28 |
AT5G13400.1
|
AT5G13400
|
Major facilitator superfamily protein |
| Chr3_+_22492811 | 0.28 |
AT3G60870.1
|
AHL18
|
AT-hook motif nuclear-localized protein 18 |
| Chr3_-_6509343 | 0.27 |
AT3G18870.1
|
AT3G18870
|
Mitochondrial transcription termination factor family protein |
| Chr4_+_16855825 | 0.27 |
AT4G35490.1
AT4G35490.2 |
MRPL11
|
mitochondrial ribosomal protein L11 |
| Chr5_-_1894124 | 0.27 |
AT5G06250.2
AT5G06250.1 AT5G06250.3 AT5G06250.4 AT5G06250.5 |
DPA4
|
AP2/B3-like transcriptional factor family protein |
| Chr3_+_17036427 | 0.27 |
AT3G46350.1
|
AT3G46350
|
LRR receptor-like Serine/Threonine-kinase |
| Chr5_-_17435405 | 0.27 |
AT5G43410.1
|
AT5G43410
|
Integrase-type DNA-binding superfamily protein |
| Chr1_-_5155563 | 0.27 |
AT1G14940.1
AT1G14940.2 |
AT1G14940
|
Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| Chr1_-_970334 | 0.27 |
AT1G03840.1
|
MGP
|
C2H2 and C2HC zinc fingers superfamily protein |
| Chr4_-_14592825 | 0.27 |
AT4G29800.2
|
PLP8
|
PATATIN-like protein 8 |
| Chr3_-_22972239 | 0.27 |
AT3G62020.2
AT3G62020.1 |
GLP10
|
germin-like protein 10 |
| Chr2_+_17209697 | 0.27 |
AT2G41280.1
|
M10
|
late embryogenesis abundant protein (M10) / LEA protein M10 |
| Chr5_-_4151201 | 0.27 |
AT5G13080.1
|
WRKY75
|
WRKY DNA-binding protein 75 |
| Chr2_-_15013368 | 0.27 |
AT2G35710.2
|
PGSIP7
|
Nucleotide-diphospho-sugar transferases superfamily protein |
| Chr1_+_8631206 | 0.27 |
AT1G24330.2
AT1G24330.1 |
AT1G24330
|
ARM repeat superfamily protein |
| Chr1_+_25706882 | 0.26 |
AT1G68510.1
|
LBD42
|
LOB domain-containing protein 42 |
| Chr5_+_2372619 | 0.26 |
AT5G07500.1
|
PEI1
|
Zinc finger C-x8-C-x5-C-x3-H type family protein |
| Chr4_-_11924230 | 0.26 |
AT4G22680.1
|
MYB85
|
myb domain protein 85 |
| Chr1_-_4259300 | 0.26 |
AT1G12480.1
|
OZS1
|
C4-dicarboxylate transporter/malic acid transport protein |
| Chr1_+_4118594 | 0.26 |
AT1G12130.1
|
AT1G12130
|
Flavin-binding monooxygenase family protein |
| Chr5_-_24578200 | 0.26 |
AT5G61090.2
|
AT5G61090
|
Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| Chr4_+_10273480 | 0.26 |
AT4G18660.1
|
AT4G18660
|
delay of germination protein |
| Chr5_-_14307036 | 0.25 |
AT5G36293.1
|
AT5G36293
|
|
| Chr5_+_58011 | 0.25 |
AT5G01170.1
|
AT5G01170
|
hypothetical protein (DUF740) |
| Chr2_-_832619 | 0.25 |
AT2G02860.2
AT2G02860.1 |
SUT2
|
sucrose transporter 2 |
| Chr5_+_1378954 | 0.25 |
AT5G04770.3
|
CAT6
|
cationic amino acid transporter 6 |
| Chr5_+_1378788 | 0.25 |
AT5G04770.2
|
CAT6
|
cationic amino acid transporter 6 |
| Chr1_+_27931836 | 0.24 |
AT1G74290.1
|
AT1G74290
|
alpha/beta-Hydrolases superfamily protein |
| Chr5_+_1378621 | 0.24 |
AT5G04770.1
|
CAT6
|
cationic amino acid transporter 6 |
| Chr1_+_13000586 | 0.24 |
AT1G35370.1
|
AT1G35370
|
|
| Chr2_+_13252076 | 0.24 |
AT2G31083.2
AT2G31083.1 |
CLE5
|
CLAVATA3/ESR-RELATED 5 |
| Chr4_+_9816278 | 0.24 |
AT4G17615.1
AT4G17615.3 AT4G17615.4 AT4G17615.2 AT4G17615.5 |
CBL1
|
calcineurin B-like protein 1 |
| Chr4_+_10961556 | 0.24 |
AT4G20310.3
AT4G20310.4 AT4G20310.2 AT4G20310.5 AT4G20310.6 AT4G20310.7 AT4G20310.8 AT4G20310.9 AT4G20310.1 |
AT4G20310
|
Peptidase M50 family protein |
| Chr4_-_16282048 | 0.24 |
AT4G33970.1
|
AT4G33970
|
Leucine-rich repeat (LRR) family protein |
| Chr5_-_23127724 | 0.24 |
AT5G57123.1
|
AT5G57123
|
hypothetical protein |
| Chr3_-_17138259 | 0.24 |
AT3G46550.1
|
SOS5
|
Fasciclin-like arabinogalactan family protein |
| Chr3_-_1499096 | 0.24 |
AT3G05260.1
|
AT3G05260
|
NAD(P)-binding Rossmann-fold superfamily protein |
| Chr5_-_18301104 | 0.24 |
AT5G45220.2
AT5G45220.1 |
AT5G45220
|
Disease resistance protein (TIR-NBS-LRR class) family |
| Chr1_-_4892332 | 0.24 |
AT1G14330.1
|
AT1G14330
|
Galactose oxidase/kelch repeat superfamily protein |
| Chr4_-_14592610 | 0.24 |
AT4G29800.1
|
PLP8
|
PATATIN-like protein 8 |
| Chr4_-_17242030 | 0.24 |
AT4G36530.1
AT4G36530.2 |
AT4G36530
|
alpha/beta-Hydrolases superfamily protein |
| Chr5_-_24577714 | 0.24 |
AT5G61090.1
|
AT5G61090
|
Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| Chr2_-_17716912 | 0.24 |
AT2G42560.1
|
AT2G42560
|
late embryogenesis abundant domain-containing protein / LEA domain-containing protein |
| Chr4_-_14700599 | 0.24 |
AT4G30074.1
|
LCR19
|
low-molecular-weight cysteine-rich 19 |
| Chr3_+_8761419 | 0.24 |
AT3G24220.1
|
NCED6
|
nine-cis-epoxycarotenoid dioxygenase 6 |
| Chr4_+_10398857 | 0.23 |
AT4G18980.1
|
AtS40-3
|
AtS40-3 |
| Chr1_+_24331373 | 0.23 |
AT1G65480.2
AT1G65480.1 |
FT
|
PEBP (phosphatidylethanolamine-binding protein) family protein |
| Chr1_-_23368369 | 0.23 |
AT1G63030.2
AT1G63030.1 |
ddf2
|
Integrase-type DNA-binding superfamily protein |
| Chr1_-_3616159 | 0.23 |
AT1G10865.2
AT1G10865.1 |
AT1G10865
|
cytochrome C oxidase assembly factor |
| Chr2_+_19109513 | 0.23 |
AT2G46535.1
|
AT2G46535
|
hypothetical protein |
| Chr3_-_2306615 | 0.23 |
AT3G07250.1
|
AT3G07250
|
RNA-binding (RRM-RBD-RNP motif) domain nuclear transport factor 2 family protein |
| Chr3_+_4187371 | 0.23 |
AT3G13065.1
|
SRF4
|
STRUBBELIG-receptor family 4 |
| Chr2_-_6874784 | 0.23 |
AT2G15780.1
|
AT2G15780
|
Cupredoxin superfamily protein |
| Chr1_+_2989141 | 0.22 |
AT1G09250.1
|
AT1G09250
|
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| Chr1_-_246054 | 0.22 |
AT1G01670.1
|
AT1G01670
|
RING/U-box superfamily protein |
| Chr4_-_17913790 | 0.22 |
AT4G38190.1
|
CSLD4
|
cellulose synthase like D4 |
| Chr2_+_5768417 | 0.22 |
AT2G13810.1
|
ALD1
|
AGD2-like defense response protein 1 |
| Chr2_-_17669836 | 0.22 |
AT2G42440.1
|
ASL15
|
Lateral organ boundaries (LOB) domain family protein |
| Chr4_+_13120824 | 0.22 |
AT4G25780.1
|
AT4G25780
|
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
| Chr3_+_5831136 | 0.22 |
AT3G17100.2
AT3G17100.1 |
AT3G17100
|
sequence-specific DNA binding transcription factor |
| Chr3_+_8295617 | 0.22 |
AT3G23240.1
|
ERF1
|
ethylene response factor 1 |
| Chr3_-_6716178 | 0.22 |
AT3G19380.1
|
PUB25
|
plant U-box 25 |
| Chr3_+_943557 | 0.22 |
AT3G03760.1
|
LBD20
|
LOB domain-containing protein 20 |
| Chr3_+_22379740 | 0.22 |
AT3G60550.1
|
CYCP3%3B2
|
cyclin p3;2 |
| Chr2_+_16221815 | 0.22 |
AT2G38820.2
AT2G38820.1 |
AT2G38820
|
DNA-directed RNA polymerase subunit beta-beta protein, putative (DUF506) |
| Chr4_+_16118830 | 0.22 |
AT4G33520.2
AT4G33520.1 AT4G33520.3 AT4G33520.4 |
PAA1
|
P-type ATP-ase 1 |
| Chr3_-_10651540 | 0.22 |
AT3G28415.1
AT3G28415.2 |
ABCB22
|
ABC transporter family protein |
| Chr1_-_8354262 | 0.22 |
AT1G23560.1
|
AT1G23560
|
OBP32pep, putative (DUF220) |
| Chr1_+_17504714 | 0.22 |
AT1G47610.1
|
AT1G47610
|
Transducin/WD40 repeat-like superfamily protein |
| Chr2_+_8059106 | 0.21 |
AT2G18560.1
|
AT2G18560
|
UDP-Glycosyltransferase superfamily protein |
| Chr2_+_15860627 | 0.21 |
AT2G37880.1
|
AT2G37880
|
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) |
| Chr1_-_28674045 | 0.21 |
AT1G76420.1
|
CUC3
|
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
| Chr1_-_19789029 | 0.21 |
AT1G53100.2
AT1G53100.1 |
AT1G53100
|
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| Chr1_-_8354619 | 0.21 |
AT1G23560.2
|
AT1G23560
|
OBP32pep, putative (DUF220) |
| Chr5_-_21607297 | 0.21 |
AT5G53270.1
|
AT5G53270
|
Seed maturation protein |
| Chr4_+_14333528 | 0.21 |
AT4G29090.1
|
AT4G29090
|
Ribonuclease H-like superfamily protein |
| Chr1_+_23004499 | 0.21 |
AT1G62270.1
|
AT1G62270
|
F-box and associated interaction domains-containing protein |
| Chr2_+_13168533 | 0.21 |
AT2G30940.3
AT2G30940.2 AT2G30940.1 |
AT2G30940
|
Protein kinase superfamily protein |
| Chr1_+_7500845 | 0.21 |
AT1G21430.1
|
YUC11
|
Flavin-binding monooxygenase family protein |
| Chr3_-_7121023 | 0.21 |
AT3G20420.1
|
RTL2
|
RNAse THREE-like protein 2 |
| Chr5_-_26036057 | 0.21 |
AT5G65165.1
AT5G65165.2 |
SDH2-3
|
succinate dehydrogenase 2-3 |
| Chr3_+_9546259 | 0.21 |
AT3G26120.1
|
TEL1
|
terminal EAR1-like 1 |
| Chr5_-_9961055 | 0.20 |
AT5G27930.1
|
AT5G27930
|
Protein phosphatase 2C family protein |
| Chr1_+_21729913 | 0.20 |
AT1G58525.1
AT1G58520.3 |
AT1G58525
RXW8
|
GDSL-like lipase/acylhydrolase superfamily protein GDSL-like lipase/acylhydrolase superfamily protein |
| Chr5_-_26850040 | 0.20 |
AT5G67290.1
|
AT5G67290
|
FAD-dependent oxidoreductase family protein |
| Chr5_+_2530834 | 0.20 |
AT5G07930.3
AT5G07930.1 AT5G07930.2 |
MCT2
|
MEI2 C-terminal RRM only like 2 |
| Chr4_-_16853035 | 0.20 |
AT4G35480.1
|
RHA3B
|
RING-H2 finger A3B |
| Chr2_+_16018210 | 0.20 |
AT2G38250.1
|
AT2G38250
|
Homeodomain-like superfamily protein |
| Chr4_+_10281033 | 0.20 |
AT4G18680.1
|
AT4G18680
|
delay of germination protein |
| Chr2_-_12611978 | 0.20 |
AT2G29390.5
|
SMO2-2
|
sterol 4-alpha-methyl-oxidase 2-2 |
| Chr5_-_24903131 | 0.20 |
AT5G61990.1
|
AT5G61990
|
Pentatricopeptide repeat (PPR) superfamily protein |
Network of associatons between targets according to the STRING database.
First level regulatory network of AT1G75080
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.3 | 1.1 | GO:0035264 | multicellular organism growth(GO:0035264) |
| 0.2 | 0.6 | GO:0050687 | negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687) |
| 0.2 | 0.9 | GO:0043620 | regulation of DNA-templated transcription in response to stress(GO:0043620) |
| 0.1 | 0.6 | GO:0080065 | 4-alpha-methyl-delta7-sterol oxidation(GO:0080065) |
| 0.1 | 0.8 | GO:0009099 | valine biosynthetic process(GO:0009099) |
| 0.1 | 0.5 | GO:0005980 | glycogen catabolic process(GO:0005980) |
| 0.1 | 0.7 | GO:0080187 | floral organ senescence(GO:0080187) |
| 0.1 | 0.3 | GO:0043181 | cellular sodium ion homeostasis(GO:0006883) vacuolar sequestering(GO:0043181) |
| 0.1 | 0.4 | GO:0006106 | fumarate metabolic process(GO:0006106) |
| 0.1 | 0.4 | GO:0046345 | sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345) |
| 0.1 | 0.3 | GO:0051091 | positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091) |
| 0.1 | 0.3 | GO:0051457 | maintenance of protein location in nucleus(GO:0051457) |
| 0.1 | 0.3 | GO:0050878 | regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891) |
| 0.1 | 0.6 | GO:0009939 | positive regulation of gibberellic acid mediated signaling pathway(GO:0009939) |
| 0.1 | 0.3 | GO:0019336 | phenol-containing compound catabolic process(GO:0019336) |
| 0.1 | 0.2 | GO:0010116 | positive regulation of abscisic acid biosynthetic process(GO:0010116) |
| 0.1 | 0.2 | GO:0017145 | stem cell division(GO:0017145) |
| 0.1 | 0.5 | GO:0009405 | pathogenesis(GO:0009405) |
| 0.1 | 0.5 | GO:0009799 | specification of symmetry(GO:0009799) |
| 0.0 | 0.3 | GO:0010344 | seed oilbody biogenesis(GO:0010344) |
| 0.0 | 0.2 | GO:0048479 | style development(GO:0048479) |
| 0.0 | 0.7 | GO:0080163 | regulation of protein serine/threonine phosphatase activity(GO:0080163) |
| 0.0 | 0.7 | GO:0015833 | oligopeptide transport(GO:0006857) peptide transport(GO:0015833) |
| 0.0 | 0.6 | GO:0010274 | hydrotropism(GO:0010274) |
| 0.0 | 0.4 | GO:0010199 | organ boundary specification between lateral organs and the meristem(GO:0010199) |
| 0.0 | 0.3 | GO:0048655 | anther morphogenesis(GO:0048654) anther wall tapetum morphogenesis(GO:0048655) |
| 0.0 | 0.1 | GO:0045905 | positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905) |
| 0.0 | 0.2 | GO:0019419 | sulfate reduction(GO:0019419) |
| 0.0 | 0.3 | GO:0070814 | hydrogen sulfide biosynthetic process(GO:0070814) |
| 0.0 | 0.1 | GO:0001672 | regulation of chromatin assembly or disassembly(GO:0001672) |
| 0.0 | 0.4 | GO:0022610 | cell adhesion(GO:0007155) biological adhesion(GO:0022610) |
| 0.0 | 0.2 | GO:0008535 | respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034) |
| 0.0 | 0.9 | GO:0006094 | gluconeogenesis(GO:0006094) |
| 0.0 | 0.2 | GO:1904961 | quiescent center organization(GO:1904961) |
| 0.0 | 0.3 | GO:0070919 | production of siRNA involved in chromatin silencing by small RNA(GO:0070919) |
| 0.0 | 0.2 | GO:0035434 | copper ion transmembrane transport(GO:0035434) |
| 0.0 | 0.2 | GO:2000014 | regulation of endosperm development(GO:2000014) |
| 0.0 | 0.1 | GO:0043693 | monoterpene biosynthetic process(GO:0043693) |
| 0.0 | 0.2 | GO:0010371 | regulation of gibberellin biosynthetic process(GO:0010371) |
| 0.0 | 0.6 | GO:0003333 | amino acid transmembrane transport(GO:0003333) |
| 0.0 | 0.9 | GO:0010193 | response to ozone(GO:0010193) |
| 0.0 | 0.7 | GO:0009695 | jasmonic acid biosynthetic process(GO:0009695) |
| 0.0 | 0.1 | GO:0034051 | negative regulation of plant-type hypersensitive response(GO:0034051) |
| 0.0 | 0.2 | GO:0006121 | mitochondrial electron transport, succinate to ubiquinone(GO:0006121) |
| 0.0 | 0.2 | GO:1904276 | regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278) |
| 0.0 | 0.9 | GO:0009828 | plant-type cell wall loosening(GO:0009828) |
| 0.0 | 0.3 | GO:1901141 | regulation of lignin biosynthetic process(GO:1901141) |
| 0.0 | 0.5 | GO:0000162 | tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219) |
| 0.0 | 0.1 | GO:0010731 | protein glutathionylation(GO:0010731) |
| 0.0 | 0.5 | GO:0071577 | zinc II ion transmembrane transport(GO:0071577) |
| 0.0 | 0.3 | GO:0010497 | plasmodesmata-mediated intercellular transport(GO:0010497) |
| 0.0 | 0.1 | GO:0006741 | NADP biosynthetic process(GO:0006741) |
| 0.0 | 0.3 | GO:0009299 | mRNA transcription(GO:0009299) |
| 0.0 | 0.1 | GO:0000914 | assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) phragmoplast assembly(GO:0000914) phragmoplast microtubule organization(GO:0080175) assembly of actomyosin apparatus involved in mitotic cytokinesis(GO:1902407) |
| 0.0 | 0.4 | GO:0043069 | negative regulation of programmed cell death(GO:0043069) |
| 0.0 | 0.1 | GO:0010023 | proanthocyanidin biosynthetic process(GO:0010023) |
| 0.0 | 0.3 | GO:0002213 | defense response to insect(GO:0002213) |
| 0.0 | 0.1 | GO:0080190 | lateral growth(GO:0080190) |
| 0.0 | 0.1 | GO:0006501 | C-terminal protein lipidation(GO:0006501) |
| 0.0 | 0.2 | GO:0007143 | female meiotic division(GO:0007143) |
| 0.0 | 0.0 | GO:0043953 | protein transport by the Tat complex(GO:0043953) |
| 0.0 | 1.7 | GO:0010200 | response to chitin(GO:0010200) |
| 0.0 | 0.2 | GO:0009862 | systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862) |
| 0.0 | 0.1 | GO:0046482 | para-aminobenzoic acid metabolic process(GO:0046482) |
| 0.0 | 0.1 | GO:0032366 | intracellular sterol transport(GO:0032366) |
| 0.0 | 0.1 | GO:0030834 | regulation of actin filament depolymerization(GO:0030834) |
| 0.0 | 0.1 | GO:0006297 | nucleotide-excision repair, DNA gap filling(GO:0006297) DNA integration(GO:0015074) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0009897 | external side of plasma membrane(GO:0009897) |
| 0.0 | 0.3 | GO:0031380 | RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380) |
| 0.0 | 0.1 | GO:0034274 | Atg12-Atg5-Atg16 complex(GO:0034274) |
| 0.0 | 0.3 | GO:0019773 | proteasome core complex, alpha-subunit complex(GO:0019773) |
| 0.0 | 0.4 | GO:0045239 | tricarboxylic acid cycle enzyme complex(GO:0045239) |
| 0.0 | 0.2 | GO:0045281 | respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281) |
| 0.0 | 0.0 | GO:0033281 | TAT protein transport complex(GO:0033281) |
| 0.0 | 0.3 | GO:0012511 | monolayer-surrounded lipid storage body(GO:0012511) |
| 0.0 | 0.1 | GO:0032807 | DNA ligase IV complex(GO:0032807) |
| 0.0 | 0.1 | GO:0030014 | CCR4-NOT complex(GO:0030014) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 0.7 | GO:0046423 | allene-oxide cyclase activity(GO:0046423) |
| 0.2 | 1.0 | GO:0004848 | ureidoglycolate hydrolase activity(GO:0004848) |
| 0.2 | 0.5 | GO:0035671 | enone reductase activity(GO:0035671) |
| 0.1 | 0.8 | GO:0052656 | L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656) |
| 0.1 | 0.4 | GO:0080132 | fatty acid alpha-hydroxylase activity(GO:0080132) |
| 0.1 | 0.5 | GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703) |
| 0.1 | 0.6 | GO:0004611 | phosphoenolpyruvate carboxykinase activity(GO:0004611) |
| 0.1 | 0.4 | GO:0010295 | (+)-abscisic acid 8'-hydroxylase activity(GO:0010295) |
| 0.1 | 0.5 | GO:0019871 | ion channel inhibitor activity(GO:0008200) channel inhibitor activity(GO:0016248) sodium channel regulator activity(GO:0017080) sodium channel inhibitor activity(GO:0019871) |
| 0.1 | 0.4 | GO:0004333 | fumarate hydratase activity(GO:0004333) |
| 0.1 | 0.2 | GO:0000248 | C-5 sterol desaturase activity(GO:0000248) |
| 0.1 | 0.6 | GO:0000254 | C-4 methylsterol oxidase activity(GO:0000254) |
| 0.1 | 0.6 | GO:0008199 | ferric iron binding(GO:0008199) |
| 0.1 | 0.4 | GO:0070696 | transmembrane receptor protein serine/threonine kinase binding(GO:0070696) |
| 0.1 | 0.9 | GO:0008106 | alcohol dehydrogenase (NADP+) activity(GO:0008106) |
| 0.0 | 0.2 | GO:0004048 | anthranilate phosphoribosyltransferase activity(GO:0004048) |
| 0.0 | 0.3 | GO:0003968 | RNA-directed RNA polymerase activity(GO:0003968) |
| 0.0 | 0.2 | GO:0043682 | copper-transporting ATPase activity(GO:0043682) |
| 0.0 | 0.3 | GO:0004834 | tryptophan synthase activity(GO:0004834) |
| 0.0 | 0.2 | GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764) |
| 0.0 | 0.3 | GO:1990137 | plant seed peroxidase activity(GO:1990137) |
| 0.0 | 0.7 | GO:0015174 | basic amino acid transmembrane transporter activity(GO:0015174) |
| 0.0 | 0.3 | GO:0004020 | adenylylsulfate kinase activity(GO:0004020) |
| 0.0 | 0.7 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
| 0.0 | 0.2 | GO:0008177 | succinate dehydrogenase (ubiquinone) activity(GO:0008177) |
| 0.0 | 0.9 | GO:0016762 | xyloglucan:xyloglucosyl transferase activity(GO:0016762) |
| 0.0 | 0.3 | GO:0008506 | sucrose:proton symporter activity(GO:0008506) |
| 0.0 | 0.3 | GO:0070180 | large ribosomal subunit rRNA binding(GO:0070180) |
| 0.0 | 0.3 | GO:0004332 | fructose-bisphosphate aldolase activity(GO:0004332) |
| 0.0 | 0.1 | GO:0005093 | Rab GDP-dissociation inhibitor activity(GO:0005093) |
| 0.0 | 0.2 | GO:0008131 | primary amine oxidase activity(GO:0008131) |
| 0.0 | 0.2 | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity(GO:0003955) |
| 0.0 | 0.1 | GO:0080002 | UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002) |
| 0.0 | 0.9 | GO:0004523 | RNA-DNA hybrid ribonuclease activity(GO:0004523) |
| 0.0 | 0.2 | GO:0103075 | indole-3-pyruvate monooxygenase activity(GO:0103075) |
| 0.0 | 0.1 | GO:0010334 | sesquiterpene synthase activity(GO:0010334) |
| 0.0 | 0.5 | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682) |
| 0.0 | 0.1 | GO:0098599 | palmitoyl hydrolase activity(GO:0098599) |
| 0.0 | 0.5 | GO:0005385 | zinc ion transmembrane transporter activity(GO:0005385) |
| 0.0 | 0.2 | GO:0004144 | diacylglycerol O-acyltransferase activity(GO:0004144) |
| 0.0 | 0.3 | GO:0010333 | terpene synthase activity(GO:0010333) |
| 0.0 | 0.2 | GO:0016847 | 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847) |
| 0.0 | 0.3 | GO:0008308 | voltage-gated anion channel activity(GO:0008308) |
| 0.0 | 0.0 | GO:0004046 | aminoacylase activity(GO:0004046) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.6 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
| 0.1 | 0.6 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 0.6 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |