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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G69570

Z-value: 0.72

Transcription factors associated with AT1G69570

Gene Symbol Gene ID Gene Info
AT1G69570
AT1G69570 Dof-type zinc finger DNA-binding family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT1G69570arTal_v1_Chr1_-_26163715_261637150.362.0e-01Click!

Activity profile of AT1G69570 motif

Sorted Z-values of AT1G69570 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_+_21240717 1.05 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
Chr5_-_14753088 0.90 AT5G37260.1
RVE2
Homeodomain-like superfamily protein
Chr5_-_17199793 0.76 AT5G42900.1
AT5G42900.3
AT5G42900.2
COR27
cold regulated protein 27
Chr5_+_5205869 0.75 AT5G15950.1
AT5G15950
Adenosylmethionine decarboxylase family protein
Chr5_+_5206156 0.75 AT5G15950.2
AT5G15950
Adenosylmethionine decarboxylase family protein
Chr1_-_9275193 0.75 AT1G26790.1
AT1G26790
Dof-type zinc finger DNA-binding family protein
Chr3_+_3923735 0.58 AT3G12320.2
AT3G12320
hypothetical protein
Chr3_+_3923515 0.56 AT3G12320.1
AT3G12320
hypothetical protein
Chr3_-_489467 0.54 AT3G02380.1
COL2
CONSTANS-like 2
Chr3_+_3923969 0.54 AT3G12320.3
AT3G12320
hypothetical protein
Chr5_-_7054281 0.53 AT5G20830.3
SUS1
sucrose synthase 1
Chr1_-_22871298 0.53 AT1G61890.3
AT1G61890.1
AT1G61890.2
AT1G61890
MATE efflux family protein
Chr5_-_7054713 0.53 AT5G20830.1
SUS1
sucrose synthase 1
Chr5_-_7055398 0.52 AT5G20830.2
SUS1
sucrose synthase 1
Chr4_+_12827856 0.51 AT4G24960.1
AT4G24960.3
AT4G24960.2
HVA22D
HVA22 homologue D
Chr3_-_17475274 0.50 AT3G47420.3
AT3G47420.1
AT3G47420.2
G3Pp1
putative glycerol-3-phosphate transporter 1
Chr1_-_26163715 0.50 AT1G69570.1
AT1G69570
Dof-type zinc finger DNA-binding family protein
Chr4_-_18206684 0.50 AT4G39070.1
BZS1
B-box zinc finger family protein
Chr3_+_2441565 0.49 AT3G07650.4
AT3G07650.1
AT3G07650.3
AT3G07650.2
COL9
CONSTANS-like 9
Chr4_-_15954803 0.48 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Chr3_-_2569700 0.48 AT3G08040.2
AT3G08040.1
FRD3
MATE efflux family protein
Chr2_+_9126263 0.48 AT2G21320.1
BBX18
B-box zinc finger family protein
Chr2_+_13987669 0.47 AT2G32960.1
PFA-DSP2
Phosphotyrosine protein phosphatases superfamily protein
Chr4_+_8646150 0.46 AT4G15160.2
AT4G15160.1
AT4G15160
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_5759817 0.46 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr3_-_2890520 0.45 AT3G09390.2
AT3G09390.1
MT2A
metallothionein 2A
Chr1_+_25701770 0.45 AT1G68500.1
AT1G68500
hypothetical protein
Chr5_+_15878698 0.43 AT5G39660.1
AT5G39660.3
AT5G39660.2
CDF2
cycling DOF factor 2
Chr3_+_3595694 0.43 AT3G11430.1
GPAT5
glycerol-3-phosphate acyltransferase 5
Chr5_-_1994824 0.43 AT5G06530.2
AT5G06530.3
AT5G06530.4
AT5G06530.1
ABCG22
ABC-2 type transporter family protein
Chr4_+_8418242 0.41 AT4G14690.1
ELIP2
Chlorophyll A-B binding family protein
Chr4_+_17639 0.40 AT4G00050.1
AT4G00050.3
AT4G00050.2
UNE10
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_+_21652988 0.39 AT1G58340.1
ZF14
MATE efflux family protein
Chr5_-_23117403 0.38 AT5G57110.3
AT5G57110.1
AT5G57110.2
ACA8
autoinhibited Ca2+ -ATPase, isoform 8
Chr3_+_10576961 0.38 AT3G28310.1
AT3G28310
hypothetical protein (DUF677)
Chr3_+_2465235 0.38 AT3G07720.1
AT3G07720
Galactose oxidase/kelch repeat superfamily protein
Chr3_-_7101637 0.38 AT3G20360.1
AT3G20360
TRAF-like family protein
Chr1_+_21868190 0.37 AT1G59530.1
bZIP4
basic leucine-zipper 4
Chr4_-_16285229 0.37 AT4G33980.1
AT4G33980
hypothetical protein
Chr1_+_5872024 0.37 AT1G17180.1
GSTU25
glutathione S-transferase TAU 25
Chr4_-_16285059 0.37 AT4G33980.2
AT4G33980
hypothetical protein
Chr1_-_3481041 0.36 AT1G10550.1
XTH33
xyloglucan:xyloglucosyl transferase 33
Chr2_+_873506 0.36 AT2G02990.1
RNS1
ribonuclease 1
Chr1_-_6579314 0.34 AT1G19050.1
ARR7
response regulator 7
Chr2_+_12004658 0.34 AT2G28160.1
AT2G28160.2
FRU
FER-like regulator of iron uptake
Chr1_-_507268 0.34 AT1G02460.1
AT1G02460
Pectin lyase-like superfamily protein
Chr2_-_15955752 0.34 AT2G38110.1
GPAT6
glycerol-3-phosphate acyltransferase 6
Chr1_+_16263805 0.34 AT1G43160.1
RAP2.6
related to AP2 6
Chr5_-_5759449 0.34 AT5G17460.4
AT5G17460.5
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr3_-_1756924 0.34 AT3G05880.1
RCI2A
Low temperature and salt responsive protein family
Chr3_+_15983199 0.34 AT3G44300.1
NIT2
nitrilase 2
Chr3_+_2176788 0.34 AT3G06890.1
AT3G06890
transmembrane protein
Chr4_+_13675537 0.33 AT4G27310.1
BBX28
B-box type zinc finger family protein
Chr1_-_28897120 0.32 AT1G76930.2
EXT4
extensin 4
Chr1_-_22280593 0.32 AT1G60470.1
GolS4
galactinol synthase 4
Chr3_+_5720941 0.32 AT3G16800.5
AT3G16800.4
AT3G16800.2
AT3G16800.6
AT3G16800.1
AT3G16800
Protein phosphatase 2C family protein
Chr2_+_528179 0.32 AT2G02100.1
LCR69
low-molecular-weight cysteine-rich 69
Chr3_-_4834015 0.32 AT3G14440.1
NCED3
nine-cis-epoxycarotenoid dioxygenase 3
Chr1_-_3756998 0.32 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
Chr5_-_19977620 0.32 AT5G49280.1
AT5G49280
hydroxyproline-rich glycoprotein family protein
Chr4_-_14117367 0.32 AT4G28560.1
RIC7
ROP-interactive CRIB motif-containing protein 7
Chr4_+_16091535 0.32 AT4G33440.1
AT4G33440
Pectin lyase-like superfamily protein
Chr3_-_23046153 0.32 AT3G62270.1
AT3G62270
HCO3- transporter family
Chr1_-_28896883 0.32 AT1G76930.1
EXT4
extensin 4
Chr5_-_9366963 0.32 AT5G26620.1
AT5G26620
hypothetical protein
Chr2_-_17202848 0.31 AT2G41250.1
AT2G41250
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_19648362 0.31 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_994726 0.31 AT4G02280.1
SUS3
sucrose synthase 3
Chr1_-_28442429 0.31 AT1G75750.2
AT1G75750.1
GASA1
GAST1 protein homolog 1
Chr3_+_5721225 0.31 AT3G16800.3
AT3G16800
Protein phosphatase 2C family protein
Chr5_+_4768263 0.31 AT5G14760.1
AO
L-aspartate oxidase
Chr4_-_15857440 0.30 AT4G32860.1
AT4G32860
Avr9/Cf-9 rapidly elicited protein
Chr1_+_15891281 0.30 AT1G42430.1
AT1G42430.2
AT1G42430
inactive purple acid phosphatase-like protein
Chr5_+_22492892 0.30 AT5G55530.2
AT5G55530.1
AT5G55530
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr4_+_9028262 0.30 AT4G15910.1
DI21
drought-induced 21
Chr5_+_22493103 0.30 AT5G55530.3
AT5G55530
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr5_-_19563832 0.30 AT5G48250.1
BBX8
B-box type zinc finger protein with CCT domain-containing protein
Chr4_+_10498748 0.30 AT4G19200.1
AT4G19200
proline-rich family protein
Chr1_-_8414886 0.30 AT1G23800.1
AT1G23800.2
ALDH2B7
aldehyde dehydrogenase 2B7
Chr4_+_18160903 0.30 AT4G38960.2
AT4G38960.6
AT4G38960.5
AT4G38960.1
AT4G38960.4
BBX19
B-box type zinc finger family protein
Chr5_-_19302117 0.29 AT5G47610.1
AT5G47610
RING/U-box superfamily protein
Chr5_-_1217362 0.29 AT5G04340.1
ZAT6
6
Chr2_+_15056753 0.28 AT2G35850.1
AT2G35850
transmembrane protein
Chr5_+_17148808 0.28 AT5G42760.2
AT5G42760.1
AT5G42760
Leucine carboxyl methyltransferase
Chr1_-_18238497 0.28 AT1G49310.1
AT1G49310
transmembrane protein
Chr3_-_7527677 0.28 AT3G21370.1
BGLU19
beta glucosidase 19
Chr1_+_1425539 0.27 AT1G05000.3
AT1G05000.1
AT1G05000.2
PFA-DSP1
Phosphotyrosine protein phosphatases superfamily protein
Chr1_-_10184512 0.27 AT1G29160.1
AT1G29160
Dof-type zinc finger DNA-binding family protein
Chr3_+_9475350 0.27 AT3G25890.2
AT3G25890.1
CRF11
Integrase-type DNA-binding superfamily protein
Chr3_-_20048190 0.27 AT3G54140.2
PTR1
peptide transporter 1
Chr3_-_20376522 0.27 AT3G54990.1
AT3G54990.2
SMZ
Integrase-type DNA-binding superfamily protein
Chr3_-_15704391 0.27 AT3G43850.2
AT3G43850
hypothetical protein
Chr3_-_11384145 0.27 AT3G29575.1
AT3G29575.4
AT3G29575.3
AFP3
ABI five binding protein 3
Chr5_-_25866972 0.27 AT5G64700.2
AT5G64700.1
UMAMIT21
nodulin MtN21 /EamA-like transporter family protein
Chr3_-_20048745 0.27 AT3G54140.1
PTR1
peptide transporter 1
Chr1_+_28829243 0.27 AT1G76800.1
AT1G76800
Vacuolar iron transporter (VIT) family protein
Chr2_-_12239124 0.26 AT2G28560.4
AT2G28560.2
AT2G28560.6
AT2G28560.5
AT2G28560.1
RAD51B
DNA repair (Rad51) family protein
Chr1_-_156011 0.26 AT1G01420.1
UGT72B3
UDP-glucosyl transferase 72B3
Chr5_+_17951442 0.26 AT5G44565.2
AT5G44565.1
AT5G44565.3
AT5G44565
transmembrane protein
Chr5_-_17943283 0.26 AT5G44550.1
AT5G44550
Uncharacterized protein family (UPF0497)
Chr3_-_21097481 0.26 AT3G57010.1
AT3G57010
Calcium-dependent phosphotriesterase superfamily protein
Chr1_-_27290532 0.26 AT1G72490.3
AT1G72490
hypothetical protein
Chr2_+_8183638 0.26 AT2G18890.1
AT2G18890.3
AT2G18890
Protein kinase superfamily protein
Chr1_+_7610241 0.25 AT1G21670.1
AT1G21670
DPP6 amino-terminal domain protein
Chr2_-_12228543 0.25 AT2G28550.6
AT2G28550.5
AT2G28550.4
AT2G28550.3
AT2G28550.1
AT2G28550.2
RAP2.7
related to AP2.7
Chr5_-_3242266 0.25 AT5G10310.2
AT5G10310.1
AT5G10310
EPIDERMAL PATTERNING FACTOR-like protein
Chr1_-_156178 0.25 AT1G01420.2
UGT72B3
UDP-glucosyl transferase 72B3
Chr1_-_6904155 0.25 AT1G19880.1
AT1G19880
Regulator of chromosome condensation (RCC1) family protein
Chr5_+_22808641 0.25 AT5G56320.2
AT5G56320.1
AT5G56320.3
EXPA14
expansin A14
Chr1_+_26400694 0.25 AT1G70090.1
AT1G70090.2
LGT8
glucosyl transferase family 8
Chr3_-_4714698 0.25 AT3G14200.1
AT3G14200
Chaperone DnaJ-domain superfamily protein
Chr1_-_27291099 0.25 AT1G72490.2
AT1G72490.1
AT1G72490
hypothetical protein
Chr2_-_12343443 0.25 AT2G28780.1
AT2G28780
P-hydroxybenzoic acid efflux pump subunit
Chr5_-_21337002 0.25 AT5G52570.2
AT5G52570.1
BETA-OHASE 2
beta-carotene hydroxylase 2
Chr3_+_1795145 0.25 AT3G05980.1
AT3G05980
hypothetical protein
Chr2_-_16690182 0.25 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
Chr5_-_23108883 0.24 AT5G57100.4
AT5G57100.1
AT5G57100.2
AT5G57100.3
AT5G57100
Nucleotide/sugar transporter family protein
Chr4_-_11313709 0.24 AT4G21215.1
AT4G21215.2
AT4G21215
transmembrane protein
Chr1_-_2406049 0.24 AT1G07750.1
AT1G07750
RmlC-like cupins superfamily protein
Chr2_-_6493512 0.24 AT2G15020.1
AT2G15020
hypothetical protein
Chr1_-_23511997 0.24 AT1G63410.2
AT1G63410.1
AT1G63410.3
AT1G63410
LURP-one-like protein (DUF567)
Chr5_+_25236945 0.24 AT5G62880.2
AT5G62880.1
RAC10
RAC-like 10
Chr1_-_6074525 0.24 AT1G17665.1
AT1G17665
CA-responsive protein
Chr5_-_20001572 0.24 AT5G49330.1
MYB111
myb domain protein 111
Chr1_-_25176230 0.24 AT1G67265.1
RTFL21
ROTUNDIFOLIA like 21
Chr1_-_1659611 0.24 AT1G05570.1
CALS1
callose synthase 1
Chr1_-_11595982 0.24 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
Chr1_-_1659437 0.24 AT1G05570.2
CALS1
callose synthase 1
Chr4_+_16746525 0.24 AT4G35190.2
LOG5
Putative lysine decarboxylase family protein
Chr1_-_1659079 0.24 AT1G05570.3
CALS1
callose synthase 1
Chr3_+_3203988 0.24 AT3G10340.1
PAL4
phenylalanine ammonia-lyase 4
Chr3_+_5025184 0.24 AT3G14940.1
PPC3
phosphoenolpyruvate carboxylase 3
Chr3_+_5025383 0.24 AT3G14940.2
PPC3
phosphoenolpyruvate carboxylase 3
Chr3_+_5243432 0.24 AT3G15510.1
NAC2
NAC domain containing protein 2
Chr4_-_17530589 0.24 AT4G37250.1
AT4G37250
Leucine-rich repeat protein kinase family protein
Chr1_-_29034822 0.23 AT1G77280.2
AT1G77280.1
AT1G77280
kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
Chr4_+_131422 0.23 AT4G00305.1
AT4G00305
RING/U-box superfamily protein
Chr4_+_15141068 0.23 AT4G31140.1
AT4G31140
O-Glycosyl hydrolases family 17 protein
Chr5_-_469110 0.23 AT5G02270.2
ABCI20
non-intrinsic ABC protein 9
Chr1_+_8692630 0.23 AT1G24530.1
AT1G24530
Transducin/WD40 repeat-like superfamily protein
Chr1_+_9259750 0.23 AT1G26770.2
EXPA10
expansin A10
Chr5_-_469272 0.23 AT5G02270.1
ABCI20
non-intrinsic ABC protein 9
Chr1_+_4647815 0.23 AT1G13590.1
PSK1
phytosulfokine 1 precursor
Chr2_+_13580371 0.23 AT2G31940.1
AT2G31940
oxidoreductase/transition metal ion-binding protein
Chr1_-_1658806 0.23 AT1G05570.4
CALS1
callose synthase 1
Chr2_+_18537177 0.23 AT2G44940.1
AT2G44940
Integrase-type DNA-binding superfamily protein
Chr5_+_20644525 0.23 AT5G50760.1
AT5G50760
SAUR-like auxin-responsive protein family
Chr5_-_25254318 0.23 AT5G62920.1
ARR6
response regulator 6
Chr1_-_9451768 0.23 AT1G27200.1
AT1G27200
glycosyltransferase family protein (DUF23)
Chr1_-_3444360 0.23 AT1G10470.1
ARR4
response regulator 4
Chr3_+_484256 0.23 AT3G02370.1
AT3G02370.4
AT3G02370.2
AT3G02370.3
AT3G02370
tRNA-splicing endonuclease subunit
Chr4_-_16942060 0.23 AT4G35750.1
AT4G35750
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Chr3_+_22670729 0.23 AT3G61250.1
MYB17
myb domain protein 17
Chr3_-_21103719 0.23 AT3G57030.1
AT3G57030
Calcium-dependent phosphotriesterase superfamily protein
Chr2_+_8183879 0.23 AT2G18890.2
AT2G18890
Protein kinase superfamily protein
Chr4_-_13222376 0.23 AT4G26080.1
ABI1
Protein phosphatase 2C family protein
Chr5_+_20070489 0.23 AT5G49480.1
CP1
Ca2+-binding protein 1
Chr1_-_2562316 0.23 AT1G08165.1
AT1G08165
hypothetical protein
Chr3_+_4449259 0.22 AT3G13610.1
AT3G13610
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_-_623739 0.22 AT3G02850.1
AT3G02850.2
SKOR
STELAR K+ outward rectifier
Chr2_-_19650287 0.22 AT2G48030.1
AT2G48030.2
AT2G48030
DNAse I-like superfamily protein
Chr1_-_3443957 0.22 AT1G10470.3
AT1G10470.2
ARR4
response regulator 4
Chr1_+_7404328 0.22 AT1G21140.1
AT1G21140
Vacuolar iron transporter (VIT) family protein
Chr1_+_10715482 0.22 AT1G30360.1
ERD4
Early-responsive to dehydration stress protein (ERD4)
Chr5_-_18021508 0.22 AT5G44670.1
GALS2
glycosyltransferase family protein (DUF23)
Chr1_-_3029549 0.22 AT1G09380.1
UMAMIT25
nodulin MtN21 /EamA-like transporter family protein
Chr4_-_5456100 0.22 AT4G08570.1
AT4G08570
Heavy metal transport/detoxification superfamily protein
Chr1_+_21237839 0.22 AT1G56660.1
AT1G56660.2
AT1G56660
MAEBL domain protein
Chr1_+_7835781 0.22 AT1G22190.1
AT1G22190
Integrase-type DNA-binding superfamily protein
Chr1_-_11420961 0.22 AT1G31830.2
AT1G31830.1
PUT2
Amino acid permease family protein
Chr4_+_12086898 0.22 AT4G23060.1
IQD22
IQ-domain 22
Chr4_-_682601 0.22 AT4G01575.1
AT4G01575
serine protease inhibitor, Kazal-type family protein
Chr1_+_18030704 0.22 AT1G48745.1
AT1G48745
hypothetical protein
Chr5_+_25703649 0.22 AT5G64260.1
EXL2
EXORDIUM like 2
Chr5_+_4432297 0.22 AT5G13740.2
AT5G13740.1
ZIF1
zinc induced facilitator 1
Chr5_+_19081458 0.22 AT5G47020.1
AT5G47020
MraZ
Chr4_-_304508 0.22 AT4G00730.2
AT4G00730.1
ANL2
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Chr2_+_9917443 0.22 AT2G23310.1
AT2G23310.2
ATRER1C1
Rer1 family protein
Chr4_-_14733628 0.22 AT4G30120.1
HMA3
heavy metal atpase 3
Chr3_+_18672906 0.22 AT3G50350.1
AT3G50350
membrane insertase, putative (DUF1685)
Chr3_-_19547171 0.22 AT3G52740.1
AT3G52740
hypothetical protein
Chr3_+_22635803 0.22 AT3G61160.3
AT3G61160.6
AT3G61160.5
AT3G61160.4
AT3G61160.2
AT3G61160.1
AT3G61160
Protein kinase superfamily protein
Chr4_-_6718550 0.22 AT4G10960.1
UGE5
UDP-D-glucose/UDP-D-galactose 4-epimerase 5
Chr5_-_17847549 0.21 AT5G44306.1
AT5G44306
hypothetical protein
Chr5_-_2697724 0.21 AT5G08380.2
AT5G08380.1
AGAL1
alpha-galactosidase 1
Chr5_+_23355337 0.21 AT5G57660.1
COL5
CONSTANS-like 5
Chr5_-_4647461 0.21 AT5G14410.1
AT5G14410.2
AT5G14410
hypothetical protein
Chr4_+_18161088 0.21 AT4G38960.3
BBX19
B-box type zinc finger family protein
Chr4_+_14762819 0.21 AT4G30170.1
AT4G30170
Peroxidase family protein
Chr2_-_14677398 0.21 AT2G34790.1
MEE23
FAD-binding Berberine family protein
Chr2_+_17221840 0.21 AT2G41310.1
RR3
response regulator 3
Chr3_+_22630331 0.21 AT3G61150.1
HDG1
homeodomain GLABROUS 1
Chr5_+_23087122 0.21 AT5G57050.1
AT5G57050.3
AT5G57050.2
ABI2
Protein phosphatase 2C family protein
Chr1_+_9259432 0.21 AT1G26770.1
EXPA10
expansin A10
Chr2_+_7510097 0.21 AT2G17270.1
PHT3%3B3
phosphate transporter 3;3
Chr1_+_17798979 0.21 AT1G48210.5
AT1G48210.7
AT1G48210.4
AT1G48210.6
AT1G48210
Protein kinase superfamily protein
Chr5_+_8541713 0.21 AT5G24860.3
AT5G24860.1
FPF1
flowering promoting factor 1
Chr2_-_13373862 0.21 AT2G31360.1
ADS2
16:0delta9 desaturase 2
Chr2_-_13374018 0.21 AT2G31360.2
ADS2
16:0delta9 desaturase 2
Chr2_+_12023940 0.21 AT2G28200.1
AT2G28200
C2H2-type zinc finger family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G69570

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.6 GO:0072708 response to sorbitol(GO:0072708)
0.1 0.5 GO:0010507 negative regulation of autophagy(GO:0010507)
0.1 0.4 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.1 0.5 GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process(GO:2001009)
0.1 0.4 GO:0045117 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.1 0.3 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 1.3 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 0.3 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.1 0.2 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.1 0.5 GO:1900458 negative regulation of brassinosteroid mediated signaling pathway(GO:1900458)
0.1 1.1 GO:0010555 response to mannitol(GO:0010555)
0.1 0.4 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 0.4 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.1 0.3 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 1.2 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 0.2 GO:0009915 phloem sucrose loading(GO:0009915)
0.1 0.2 GO:0015783 GDP-fucose transport(GO:0015783) UDP-glucose transport(GO:0015786)
0.1 0.2 GO:0010433 bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 0.1 GO:0015802 basic amino acid transport(GO:0015802)
0.1 0.4 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.1 0.2 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.1 0.2 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.1 0.4 GO:0010148 transpiration(GO:0010148)
0.1 0.3 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.1 0.2 GO:0032951 regulation of beta-glucan metabolic process(GO:0032950) regulation of beta-glucan biosynthetic process(GO:0032951) regulation of cellulose biosynthetic process(GO:2001006)
0.1 0.5 GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning(GO:0060774)
0.1 0.2 GO:0043132 NAD transport(GO:0043132)
0.1 0.2 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1 0.4 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.1 0.3 GO:0048455 stamen formation(GO:0048455)
0.1 0.3 GO:1904961 quiescent center organization(GO:1904961)
0.1 0.4 GO:0043090 amino acid import(GO:0043090)
0.1 0.2 GO:0010203 response to very low fluence red light stimulus(GO:0010203)
0.1 0.5 GO:0010358 leaf shaping(GO:0010358)
0.1 0.6 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.1 0.4 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.0 0.1 GO:0010288 response to lead ion(GO:0010288)
0.0 0.1 GO:0019279 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.0 0.2 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.0 0.4 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.0 0.2 GO:0010351 lithium ion transport(GO:0010351)
0.0 0.5 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.0 0.1 GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process(GO:1990116)
0.0 0.4 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.0 0.6 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.0 0.1 GO:0010520 regulation of reciprocal meiotic recombination(GO:0010520)
0.0 0.2 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.0 0.0 GO:0042539 hypotonic salinity response(GO:0042539)
0.0 0.2 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.0 0.0 GO:0051196 regulation of coenzyme metabolic process(GO:0051196)
0.0 0.1 GO:0042908 xenobiotic transport(GO:0042908)
0.0 0.2 GO:0051181 cofactor transport(GO:0051181)
0.0 0.1 GO:0030026 cellular manganese ion homeostasis(GO:0030026)
0.0 0.1 GO:0048577 negative regulation of short-day photoperiodism, flowering(GO:0048577)
0.0 0.3 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.0 0.2 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.0 0.8 GO:0006826 iron ion transport(GO:0006826)
0.0 0.4 GO:0010315 auxin efflux(GO:0010315)
0.0 0.4 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.2 GO:0015846 polyamine transport(GO:0015846)
0.0 0.2 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.0 0.2 GO:0046339 diacylglycerol metabolic process(GO:0046339)
0.0 0.2 GO:0035627 ceramide transport(GO:0035627)
0.0 0.7 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.2 GO:0009647 skotomorphogenesis(GO:0009647)
0.0 0.3 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.1 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.0 0.5 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.0 GO:0075733 intracellular transport of virus(GO:0075733)
0.0 0.5 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.3 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.0 0.1 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.0 0.1 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.0 0.2 GO:0009298 GDP-mannose biosynthetic process(GO:0009298)
0.0 0.5 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.2 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.0 0.1 GO:0019406 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.0 0.2 GO:0046208 spermine catabolic process(GO:0046208)
0.0 0.1 GO:0019322 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.0 0.2 GO:0060919 auxin influx(GO:0060919)
0.0 0.1 GO:0010338 leaf formation(GO:0010338)
0.0 0.3 GO:0009435 NAD biosynthetic process(GO:0009435)
0.0 0.1 GO:0000491 small nucleolar ribonucleoprotein complex assembly(GO:0000491)
0.0 0.4 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.1 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.0 0.1 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.0 0.1 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
0.0 0.1 GO:0080171 lytic vacuole organization(GO:0080171)
0.0 0.2 GO:0043409 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
0.0 0.1 GO:1902025 nitrate import(GO:1902025)
0.0 0.2 GO:0016119 carotene metabolic process(GO:0016119)
0.0 0.2 GO:0031507 heterochromatin assembly(GO:0031507)
0.0 0.1 GO:0080145 cysteine homeostasis(GO:0080145)
0.0 0.1 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.0 0.1 GO:0090603 sieve element differentiation(GO:0090603)
0.0 0.1 GO:0006348 chromatin silencing at telomere(GO:0006348)
0.0 0.2 GO:0009942 longitudinal axis specification(GO:0009942)
0.0 0.4 GO:0032958 inositol phosphate biosynthetic process(GO:0032958)
0.0 0.1 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.0 0.5 GO:0055075 potassium ion homeostasis(GO:0055075)
0.0 0.1 GO:0071763 nuclear membrane organization(GO:0071763)
0.0 0.0 GO:0048587 regulation of short-day photoperiodism, flowering(GO:0048587)
0.0 0.1 GO:0080117 secondary growth(GO:0080117)
0.0 0.1 GO:0071490 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.0 0.1 GO:0010198 synergid death(GO:0010198)
0.0 0.3 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.0 0.6 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.2 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 0.2 GO:0071731 response to nitric oxide(GO:0071731)
0.0 0.1 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.0 0.1 GO:0080168 abscisic acid transport(GO:0080168)
0.0 0.0 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.0 0.1 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.0 0.1 GO:0048462 carpel formation(GO:0048462)
0.0 0.1 GO:0034473 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.0 0.1 GO:2000692 fatty acid homeostasis(GO:0055089) negative regulation of seed maturation(GO:2000692)
0.0 0.1 GO:0016139 glycoside catabolic process(GO:0016139)
0.0 0.6 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.3 GO:0015693 magnesium ion transport(GO:0015693)
0.0 1.2 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.0 0.1 GO:0018210 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.0 0.1 GO:0002119 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.0 0.1 GO:0034034 purine ribonucleotide catabolic process(GO:0009154) ribonucleotide catabolic process(GO:0009261) coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034)
0.0 0.6 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.1 GO:0080121 AMP transport(GO:0080121)
0.0 0.1 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.0 0.1 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.0 0.1 GO:0045604 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.0 0.2 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.4 GO:0009556 microsporogenesis(GO:0009556)
0.0 0.1 GO:0010481 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.0 0.2 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 0.1 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 3.3 GO:0009909 regulation of flower development(GO:0009909)
0.0 0.1 GO:0015824 proline transport(GO:0015824)
0.0 0.1 GO:0010601 positive regulation of auxin biosynthetic process(GO:0010601) positive regulation of auxin metabolic process(GO:0090355)
0.0 0.2 GO:0006469 negative regulation of protein kinase activity(GO:0006469) negative regulation of kinase activity(GO:0033673)
0.0 0.1 GO:0048830 adventitious root development(GO:0048830)
0.0 0.1 GO:0016099 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.0 0.1 GO:0051571 regulation of histone H3-K4 methylation(GO:0051569) positive regulation of histone H3-K4 methylation(GO:0051571)
0.0 0.1 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.0 0.1 GO:1901271 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.0 0.1 GO:0090547 guard cell fate commitment(GO:0010377) response to low humidity(GO:0090547)
0.0 0.2 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.0 0.2 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.0 0.1 GO:2000576 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.0 0.4 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.0 0.4 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.1 GO:0045995 regulation of embryonic development(GO:0045995)
0.0 0.5 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.4 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.1 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.1 GO:1901656 glycoside transport(GO:1901656)
0.0 0.1 GO:0071486 cellular response to high light intensity(GO:0071486)
0.0 0.3 GO:0009684 indoleacetic acid biosynthetic process(GO:0009684)
0.0 0.1 GO:0051596 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.0 GO:0002215 defense response to nematode(GO:0002215)
0.0 0.4 GO:0080154 regulation of fertilization(GO:0080154) regulation of double fertilization forming a zygote and endosperm(GO:0080155)
0.0 0.2 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.0 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.0 0.1 GO:0006788 heme oxidation(GO:0006788)
0.0 0.1 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.0 0.1 GO:1901006 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.0 0.1 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.0 GO:1900369 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.0 0.1 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.0 0.4 GO:0009955 adaxial/abaxial pattern specification(GO:0009955)
0.0 0.1 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.0 0.2 GO:0006787 porphyrin-containing compound catabolic process(GO:0006787) chlorophyll catabolic process(GO:0015996) tetrapyrrole catabolic process(GO:0033015) pigment catabolic process(GO:0046149)
0.0 0.1 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.0 GO:0071457 cellular response to ozone(GO:0071457)
0.0 0.0 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.0 0.9 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.3 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.1 GO:0033566 gamma-tubulin complex localization(GO:0033566)
0.0 0.1 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.0 0.3 GO:0043647 inositol phosphate metabolic process(GO:0043647) inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.0 0.2 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.0 0.1 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 0.1 GO:0009088 threonine biosynthetic process(GO:0009088)
0.0 0.0 GO:0009865 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.0 0.1 GO:0051775 response to redox state(GO:0051775)
0.0 0.1 GO:0097576 vacuole fusion(GO:0097576)
0.0 0.1 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.0 0.1 GO:0046622 positive regulation of organ growth(GO:0046622)
0.0 0.5 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788) negative regulation of response to alcohol(GO:1901420)
0.0 0.1 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.0 0.6 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.0 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.2 GO:0010152 pollen maturation(GO:0010152)
0.0 0.0 GO:0072698 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.0 0.2 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.0 0.0 GO:0051204 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.0 0.0 GO:0048478 replication fork protection(GO:0048478)
0.0 0.0 GO:0007569 cell aging(GO:0007569)
0.0 0.2 GO:0007186 G-protein coupled receptor signaling pathway(GO:0007186)
0.0 0.2 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 0.1 GO:0009819 drought recovery(GO:0009819)
0.0 0.1 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.0 0.1 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.0 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.0 0.0 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.0 0.1 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.0 0.2 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.2 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.1 GO:0048829 root cap development(GO:0048829)
0.0 0.1 GO:0015706 nitrate transport(GO:0015706)
0.0 0.2 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.2 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.1 GO:2001022 positive regulation of DNA repair(GO:0045739) positive regulation of response to DNA damage stimulus(GO:2001022)
0.0 0.1 GO:0010274 hydrotropism(GO:0010274)
0.0 0.1 GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0 0.5 GO:0045732 positive regulation of protein catabolic process(GO:0045732)
0.0 0.3 GO:0009958 positive gravitropism(GO:0009958)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 0.2 GO:0016328 lateral plasma membrane(GO:0016328)
0.1 1.2 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.1 GO:1990112 RQC complex(GO:1990112)
0.0 0.4 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.1 GO:0005712 chiasma(GO:0005712)
0.0 0.4 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.1 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.2 GO:0090397 stigma papilla(GO:0090397)
0.0 0.3 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.2 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.0 0.1 GO:0097196 Shu complex(GO:0097196)
0.0 0.1 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 0.1 GO:0030141 secretory granule(GO:0030141)
0.0 0.2 GO:0071818 BAT3 complex(GO:0071818)
0.0 0.2 GO:0010445 nuclear dicing body(GO:0010445)
0.0 0.1 GO:0070505 pollen coat(GO:0070505)
0.0 0.1 GO:0030132 clathrin coat of coated pit(GO:0030132)
0.0 0.1 GO:0001673 male germ cell nucleus(GO:0001673)
0.0 0.2 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.0 0.1 GO:0009501 amyloplast(GO:0009501)
0.0 0.1 GO:0030286 dynein complex(GO:0030286)
0.0 0.4 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.5 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 0.2 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.1 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.1 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.7 GO:0005811 lipid particle(GO:0005811)
0.0 0.1 GO:0031083 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 0.1 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.3 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.1 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.0 0.2 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.2 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.1 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.1 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.0 0.1 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 0.0 GO:0034719 SMN-Sm protein complex(GO:0034719)
0.0 0.1 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 0.2 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.0 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 0.0 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.0 0.1 GO:0030897 HOPS complex(GO:0030897)
0.0 0.2 GO:0009531 secondary cell wall(GO:0009531)
0.0 0.1 GO:0070552 BRISC complex(GO:0070552)
0.0 0.2 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0008440 inositol-1,4,5-trisphosphate 6-kinase activity(GO:0000823) inositol tetrakisphosphate 3-kinase activity(GO:0000824) inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440) inositol tetrakisphosphate 5-kinase activity(GO:0047326)
0.1 0.4 GO:0090422 thiamine pyrophosphate transporter activity(GO:0090422)
0.1 2.0 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.6 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.1 0.3 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.1 0.7 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.2 GO:1901474 azole transmembrane transporter activity(GO:1901474)
0.1 0.2 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.1 0.3 GO:0004556 alpha-amylase activity(GO:0004556)
0.1 0.4 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.1 0.2 GO:0004557 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.1 0.3 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 1.3 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 1.2 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 1.3 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.2 GO:0008517 folic acid transporter activity(GO:0008517)
0.1 0.4 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.2 GO:0016504 peptidase activator activity(GO:0016504)
0.1 0.2 GO:0009784 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.1 0.5 GO:0000400 four-way junction DNA binding(GO:0000400)
0.1 0.3 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.2 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.1 0.3 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457)
0.1 0.2 GO:1901982 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.0 0.4 GO:0010011 auxin binding(GO:0010011)
0.0 0.1 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.0 0.1 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.0 0.2 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.0 1.0 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.0 0.3 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 0.4 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.0 0.2 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.0 0.2 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.0 0.2 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.0 0.4 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.3 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.0 0.2 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.0 0.2 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.0 0.5 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.0 0.2 GO:0032791 lead ion binding(GO:0032791)
0.0 0.2 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 0.2 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.2 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.0 0.1 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.0 0.2 GO:0046624 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.0 0.2 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.0 0.2 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.3 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.0 0.1 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.0 0.4 GO:0008865 fructokinase activity(GO:0008865)
0.0 0.4 GO:0016160 amylase activity(GO:0016160) beta-amylase activity(GO:0016161)
0.0 0.5 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 1.3 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.4 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.2 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.1 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.0 0.2 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0 0.1 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 0.1 GO:0035615 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.1 GO:0016433 rRNA (adenine) methyltransferase activity(GO:0016433)
0.0 0.1 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.1 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.0 0.1 GO:0044540 L-cystine L-cysteine-lyase (deaminating)(GO:0044540)
0.0 0.4 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.0 0.2 GO:0030544 Hsp70 protein binding(GO:0030544)
0.0 0.4 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.1 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 1.7 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.7 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.7 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.6 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.2 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 0.3 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.1 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.0 0.2 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.1 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.0 0.1 GO:0004113 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.0 0.1 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.0 0.3 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.2 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.1 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.0 0.7 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.2 GO:0046592 polyamine oxidase activity(GO:0046592)
0.0 0.2 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.1 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.0 0.1 GO:0080104 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.0 0.1 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.0 0.1 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.0 0.1 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.1 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.0 0.1 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.0 0.1 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.0 0.2 GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.0 0.1 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.0 0.1 GO:0051959 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.0 0.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.3 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.2 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.3 GO:0034594 phosphatidylinositol trisphosphate phosphatase activity(GO:0034594)
0.0 0.1 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.1 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.0 0.1 GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity(GO:0004571)
0.0 0.2 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.0 0.1 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.4 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.0 0.1 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.0 0.2 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.1 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.0 0.1 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.0 0.1 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.0 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.0 0.0 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.0 0.1 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.0 0.1 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.3 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.0 0.3 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.0 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.0 0.0 GO:0015119 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.0 0.2 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.0 0.1 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.1 GO:0008131 primary amine oxidase activity(GO:0008131)
0.0 0.1 GO:0004325 ferrochelatase activity(GO:0004325)
0.0 0.1 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 0.1 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.1 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.0 0.1 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.0 0.4 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.0 0.1 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 0.1 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.1 GO:0008022 protein C-terminus binding(GO:0008022)
0.0 0.0 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.0 0.1 GO:0009824 AMP dimethylallyltransferase activity(GO:0009824)
0.0 0.1 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.0 0.1 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.0 0.1 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.4 GO:0016838 carbon-oxygen lyase activity, acting on phosphates(GO:0016838)
0.0 0.0 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.0 0.9 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.2 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 PID AP1 PATHWAY AP-1 transcription factor network
0.0 0.1 PID IL8 CXCR1 PATHWAY IL8- and CXCR1-mediated signaling events
0.0 0.1 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.0 0.2 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.0 0.3 PID MTOR 4PATHWAY mTOR signaling pathway
0.0 0.2 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.0 0.2 PID RAC1 PATHWAY RAC1 signaling pathway
0.0 0.1 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.0 0.1 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.0 0.1 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.0 0.1 PID S1P S1P1 PATHWAY S1P1 pathway
0.0 0.1 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.0 0.0 PID TRKR PATHWAY Neurotrophic factor-mediated Trk receptor signaling
0.0 0.0 NABA SECRETED FACTORS Genes encoding secreted soluble factors

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS Genes involved in Synthesis of bile acids and bile salts
0.1 0.3 REACTOME DEADENYLATION OF MRNA Genes involved in Deadenylation of mRNA
0.1 0.6 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.1 1.2 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.1 REACTOME IL 6 SIGNALING Genes involved in Interleukin-6 signaling
0.0 0.1 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.0 0.2 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.0 0.2 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.0 0.1 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.0 0.0 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.0 0.1 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.0 0.1 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.0 0.1 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.0 0.1 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.0 0.1 REACTOME NUCLEAR SIGNALING BY ERBB4 Genes involved in Nuclear signaling by ERBB4