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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G69490

Z-value: 0.93

Transcription factors associated with AT1G69490

Gene Symbol Gene ID Gene Info
AT1G69490 NAC-like, activated by AP3/PI

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAParTal_v1_Chr1_+_26122080_261220800.631.6e-02Click!

Activity profile of AT1G69490 motif

Sorted Z-values of AT1G69490 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_+_538250 1.99 AT2G02120.1
Scorpion toxin-like knottin superfamily protein
Chr5_-_17199793 1.57 AT5G42900.1
AT5G42900.3
AT5G42900.2
cold regulated protein 27
Chr4_-_7401951 1.55 AT4G12470.1
azelaic acid induced 1
Chr5_-_8444101 1.32 AT5G24660.1
response to low sulfur 2
Chr5_-_5177897 1.27 AT5G15850.1
CONSTANS-like 1
Chr4_-_18472048 1.25 AT4G39800.1
myo-inositol-1-phosphate synthase 1
Chr2_+_1993038 1.22 AT2G05440.2
AT2G05440.9
AT2G05440.5
AT2G05440.1
AT2G05440.6
AT2G05440.3
AT2G05440.4
AT2G05440.8
AT2G05440.7
GLYCINE RICH PROTEIN 9
Chr4_+_11854809 1.19 AT4G22513.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_17475274 1.19 AT3G47420.3
AT3G47420.1
AT3G47420.2
putative glycerol-3-phosphate transporter 1
Chr2_+_18346306 1.18 AT2G44460.1
beta glucosidase 28
Chr1_-_18238497 1.12 AT1G49310.1
transmembrane protein
Chr2_+_18347765 1.11 AT2G44460.2
beta glucosidase 28
Chr5_-_21992812 1.09 AT5G54190.2
AT5G54190.1
protochlorophyllide oxidoreductase A
Chr3_-_20629295 1.08 AT3G55610.1
delta 1-pyrroline-5-carboxylate synthase 2
Chr1_-_9275193 1.06 AT1G26790.1
Dof-type zinc finger DNA-binding family protein
Chr4_-_433938 1.06 AT4G01000.2
AT4G01000.1
Ubiquitin-like superfamily protein
Chr1_+_4056165 1.06 AT1G12010.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_-_23195917 1.04 AT3G62700.1
multidrug resistance-associated protein 10
Chr3_-_20629093 1.04 AT3G55610.2
delta 1-pyrroline-5-carboxylate synthase 2
Chr3_+_19845097 1.03 AT3G53530.2
AT3G53530.1
Chloroplast-targeted copper chaperone protein
Chr5_-_6976036 1.02 AT5G20630.1
germin 3
Chr3_+_7959753 1.02 AT3G22440.1
FRIGIDA-like protein
Chr1_+_7785708 0.99 AT1G22065.1
hypothetical protein
Chr1_+_27538190 0.99 AT1G73220.1
organic cation/carnitine transporter1
Chr4_-_12345652 0.96 AT4G23700.2
cation/H+ exchanger 17
Chr4_+_8839256 0.95 AT4G15450.1
AT4G15450.2
Senescence/dehydration-associated protein-like protein
Chr5_+_16579936 0.95 AT5G41410.1
POX (plant homeobox) family protein
Chr2_+_9248525 0.94 AT2G21620.1
AT2G21620.2
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr4_-_12346051 0.93 AT4G23700.1
cation/H+ exchanger 17
Chr2_+_6893949 0.93 AT2G15830.1
hypothetical protein
Chr1_+_18546086 0.93 AT1G50050.2
AT1G50050.1
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr1_-_12224000 0.93 AT1G33720.5
AT1G33720.1
AT1G33720.3
AT1G33720.2
AT1G33720.4
cytochrome P450, family 76, subfamily C, polypeptide 6
Chr3_-_2569700 0.91 AT3G08040.2
AT3G08040.1
MATE efflux family protein
Chr3_+_22935510 0.91 AT3G61930.1
hypothetical protein
Chr4_-_13864327 0.91 AT4G27830.2
beta glucosidase 10
Chr3_+_16818347 0.91 AT3G45780.2
phototropin 1
Chr5_+_17937622 0.91 AT5G44530.3
AT5G44530.2
AT5G44530.1
Subtilase family protein
Chr1_-_28302728 0.90 AT1G75410.3
AT1G75410.1
BEL1-like homeodomain 3
Chr5_+_9261479 0.90 AT5G26570.1
AT5G26570.2
chloroplastidic phosphoglucan, water dikinase (ATGWD3)
Chr4_-_13864659 0.89 AT4G27830.1
beta glucosidase 10
Chr3_+_16816721 0.88 AT3G45780.1
phototropin 1
Chr3_-_17133462 0.88 AT3G46530.1
NB-ARC domain-containing disease resistance protein
Chr2_-_15092353 0.88 AT2G35940.3
AT2G35940.1
BEL1-like homeodomain 1
Chr1_+_28829243 0.88 AT1G76800.1
Vacuolar iron transporter (VIT) family protein
Chr1_-_1704838 0.86 AT1G05680.1
Uridine diphosphate glycosyltransferase 74E2
Chr3_-_22915393 0.86 AT3G61890.1
homeobox 12
Chr2_+_528179 0.86 AT2G02100.1
low-molecular-weight cysteine-rich 69
Chr5_+_18850645 0.85 AT5G46490.3
AT5G46490.4
AT5G46490.5
AT5G46490.6
AT5G46490.7
AT5G46490.1
AT5G46490.8
AT5G46490.2
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_-_23610653 0.85 AT1G63670.5
AT1G63670.3
AT1G63670.2
hypothetical protein (DUF3741)
Chr1_+_24472873 0.84 AT1G65800.1
AT1G65800.2
receptor kinase 2
Chr1_-_3518035 0.83 AT1G10640.1
Pectin lyase-like superfamily protein
Chr3_+_19624278 0.83 AT3G52920.1
AT3G52920.2
transcriptional activator (DUF662)
Chr3_+_3923969 0.83 AT3G12320.3
hypothetical protein
Chr4_-_9583290 0.82 AT4G17030.1
expansin-like B1
Chr5_-_1994824 0.82 AT5G06530.2
AT5G06530.3
AT5G06530.4
AT5G06530.1
ABC-2 type transporter family protein
Chr3_+_15983199 0.82 AT3G44300.1
nitrilase 2
Chr3_+_9174398 0.82 AT3G25190.1
Vacuolar iron transporter (VIT) family protein
Chr1_+_15976805 0.82 AT1G42550.1
plastid movement impaired1
Chr5_-_20720681 0.82 AT5G50920.1
CLPC homologue 1
Chr3_-_7463525 0.81 AT3G21250.1
AT3G21250.6
AT3G21250.5
AT3G21250.3
AT3G21250.2
AT3G21250.4
multidrug resistance-associated protein 6
Chr1_-_26434538 0.81 AT1G70200.1
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr2_-_12343443 0.81 AT2G28780.1
P-hydroxybenzoic acid efflux pump subunit
Chr5_-_7054281 0.81 AT5G20830.3
sucrose synthase 1
Chr2_-_9231580 0.80 AT2G21560.1
nucleolar-like protein
Chr5_-_25462458 0.80 AT5G63600.2
AT5G63600.1
flavonol synthase 5
Chr1_-_156011 0.79 AT1G01420.1
UDP-glucosyl transferase 72B3
Chr1_-_23610327 0.79 AT1G63670.4
AT1G63670.1
hypothetical protein (DUF3741)
Chr1_-_30142697 0.79 AT1G80130.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_28302571 0.79 AT1G75410.2
BEL1-like homeodomain 3
Chr1_+_25746697 0.78 AT1G68570.1
Major facilitator superfamily protein
Chr5_-_7054713 0.78 AT5G20830.1
sucrose synthase 1
Chr1_-_156178 0.78 AT1G01420.2
UDP-glucosyl transferase 72B3
Chr2_-_521707 0.78 AT2G02080.4
AT2G02080.2
AT2G02080.5
AT2G02080.6
AT2G02080.3
AT2G02080.1
indeterminate(ID)-domain 4
Chr3_+_3923515 0.78 AT3G12320.1
hypothetical protein
Chr1_-_26800483 0.77 AT1G71040.1
Cupredoxin superfamily protein
Chr5_-_8160343 0.77 AT5G24120.2
AT5G24120.1
sigma factor E
Chr4_+_12310885 0.77 AT4G23600.2
Tyrosine transaminase family protein
Chr2_-_15092178 0.76 AT2G35940.2
BEL1-like homeodomain 1
Chr4_+_12310619 0.76 AT4G23600.3
Tyrosine transaminase family protein
Chr5_-_7652714 0.76 AT5G22880.1
histone B2
Chr5_-_7055398 0.76 AT5G20830.2
sucrose synthase 1
Chr4_+_12310379 0.75 AT4G23600.1
Tyrosine transaminase family protein
Chr3_+_9989511 0.75 AT3G27090.1
AT3G27090.2
AT3G27090.3
DCD (Development and Cell Death) domain protein
Chr1_-_26231375 0.74 AT1G69730.1
Wall-associated kinase family protein
Chr4_+_9171280 0.74 AT4G16190.1
Papain family cysteine protease
Chr4_+_10953540 0.74 AT4G20280.1
TBP-associated factor 11
Chr3_+_3923735 0.74 AT3G12320.2
hypothetical protein
Chr1_+_25746994 0.73 AT1G68570.2
Major facilitator superfamily protein
Chr4_-_17197247 0.73 AT4G36390.1
Methylthiotransferase
Chr2_-_19166949 0.73 AT2G46680.2
AT2G46680.1
homeobox 7
Chr5_+_3347381 0.73 AT5G10580.3
AT5G10580.4
AT5G10580.1
AT5G10580.2
plant/protein (Protein of unknown function, DUF599)
Chr1_+_20387058 0.73 AT1G54575.1
hypothetical protein
Chr2_+_12542933 0.72 AT2G29180.1
transmembrane protein
Chr1_+_8139114 0.71 AT1G22990.1
AT1G22990.2
Heavy metal transport/detoxification superfamily protein
Chr1_+_1231452 0.71 AT1G04520.1
plasmodesmata-located protein 2
Chr5_+_5995479 0.71 AT5G18130.2
transmembrane protein
Chr4_-_17564763 0.70 AT4G37330.1
cytochrome P450, family 81, subfamily D, polypeptide 4
Chr2_+_15238093 0.70 AT2G36350.1
Protein kinase superfamily protein
Chr1_-_20385380 0.70 AT1G54570.1
Esterase/lipase/thioesterase family protein
Chr5_+_21910471 0.69 AT5G53970.1
Tyrosine transaminase family protein
Chr5_-_21291928 0.69 AT5G52450.1
MATE efflux family protein
Chr1_+_20386809 0.69 AT1G54575.2
hypothetical protein
Chr2_-_1149261 0.69 AT2G03750.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_-_20576249 0.68 AT3G55500.1
expansin A16
Chr1_+_3093644 0.68 AT1G09560.1
germin-like protein 5
Chr2_-_15425129 0.68 AT2G36800.1
don-glucosyltransferase 1
Chr5_-_17022723 0.68 AT5G42570.1
B-cell receptor-associated 31-like protein
Chr1_+_13225168 0.67 AT1G35720.1
annexin 1
Chr5_+_5995323 0.67 AT5G18130.1
transmembrane protein
Chr1_+_6759859 0.67 AT1G19520.1
AT1G19520.2
pentatricopeptide (PPR) repeat-containing protein
Chr1_+_9825169 0.67 AT1G28130.1
Auxin-responsive GH3 family protein
Chr4_-_8079408 0.67 AT4G13980.1
winged-helix DNA-binding transcription factor family protein
Chr3_-_22244061 0.67 AT3G60180.2
AT3G60180.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_+_26884203 0.67 AT5G67385.3
AT5G67385.1
AT5G67385.5
AT5G67385.4
Phototropic-responsive NPH3 family protein
Chr4_-_16174723 0.67 AT4G33680.1
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr5_+_21673432 0.67 AT5G53420.4
AT5G53420.1
AT5G53420.5
AT5G53420.3
CCT motif family protein
Chr4_+_6818058 0.67 AT4G11175.1
Nucleic acid-binding, OB-fold-like protein
Chr3_-_3282131 0.66 AT3G10525.1
LOSS OF GIANT CELLS FROM ORGANS
Chr3_+_22261648 0.66 AT3G60240.3
AT3G60240.4
AT3G60240.2
eukaryotic translation initiation factor 4G
Chr5_+_2657054 0.66 AT5G08260.1
serine carboxypeptidase-like 35
Chr2_-_11834427 0.65 AT2G27770.1
DUF868 family protein (DUF868)
Chr1_+_18342451 0.65 AT1G49560.1
AT1G49560.2
Homeodomain-like superfamily protein
Chr5_-_8160163 0.65 AT5G24120.3
sigma factor E
Chr1_+_9825914 0.65 AT1G28130.2
Auxin-responsive GH3 family protein
Chr1_+_7404328 0.65 AT1G21140.1
Vacuolar iron transporter (VIT) family protein
Chr5_-_3297373 0.64 AT5G10470.2
AT5G10470.1
kinesin like protein for actin based chloroplast movement 1
Chr1_-_22417244 0.64 AT1G60890.2
AT1G60890.1
Phosphatidylinositol-4-phosphate 5-kinase family protein
Chr5_+_3157694 0.64 AT5G10100.1
AT5G10100.3
AT5G10100.4
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_6222300 0.64 AT5G18660.1
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_+_7067057 0.64 AT3G20270.4
AT3G20270.3
AT3G20270.5
AT3G20270.6
AT3G20270.1
AT3G20270.2
lipid-binding serum glycoprotein family protein
Chr5_-_4933620 0.64 AT5G15190.2
AT5G15190.1
hypothetical protein
Chr4_+_886580 0.64 AT4G02020.1
AT4G02020.2
AT4G02020.4
AT4G02020.3
SET domain-containing protein
Chr3_-_9282860 0.63 AT3G25560.3
AT3G25560.1
NSP-interacting kinase 2
Chr1_-_11719988 0.63 AT1G32450.1
nitrate transporter 1.5
Chr2_-_18734341 0.63 AT2G45450.1
binding protein
Chr5_-_304185 0.63 AT5G01780.1
AT5G01780.4
AT5G01780.3
AT5G01780.5
AT5G01780.2
2-oxoglutarate-dependent dioxygenase family protein
Chr3_+_16945433 0.63 AT3G46130.3
AT3G46130.4
myb domain protein 48
Chr3_-_3025945 0.63 AT3G09850.1
D111/G-patch domain-containing protein
Chr2_+_1076863 0.63 AT2G03550.1
alpha/beta-Hydrolases superfamily protein
Chr2_-_10831655 0.63 AT2G25450.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_+_16945230 0.62 AT3G46130.2
AT3G46130.1
myb domain protein 48
Chr4_+_6314755 0.62 AT4G10120.4
AT4G10120.2
Sucrose-phosphate synthase family protein
Chr1_-_26723978 0.62 AT1G70880.1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr5_-_21429447 0.62 AT5G52870.2
AT5G52870.1
membrane-associated kinase regulator
Chr4_-_10647079 0.62 AT4G19520.1
AT4G19520.3
AT4G19520.2
AT4G19520.5
AT4G19520.4
disease resistance protein (TIR-NBS-LRR class) family
Chr2_+_505375 0.62 AT2G02070.1
AT2G02070.2
indeterminate(ID)-domain 5
Chr2_+_993748 0.62 AT2G03270.1
DNA-binding protein
Chr2_-_18502512 0.62 AT2G44860.2
AT2G44860.1
Ribosomal protein L24e family protein
Chr2_+_18061716 0.61 AT2G43500.1
AT2G43500.3
AT2G43500.4
AT2G43500.5
AT2G43500.6
AT2G43500.7
AT2G43500.2
AT2G43500.8
Plant regulator RWP-RK family protein
Chr2_-_6891409 0.61 AT2G15820.1
endonuclease
Chr4_-_5932475 0.61 AT4G09350.1
Chaperone DnaJ-domain superfamily protein
Chr1_-_23262002 0.61 AT1G62810.1
Copper amine oxidase family protein
Chr4_-_15614544 0.61 AT4G32340.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_20097551 0.61 AT5G49525.1
transmembrane protein
Chr2_-_15729170 0.61 AT2G37460.1
nodulin MtN21 /EamA-like transporter family protein
Chr5_+_20764096 0.60 AT5G51070.1
Clp ATPase
Chr1_+_20713499 0.60 AT1G55480.1
protein containing PDZ domain, a K-box domain, and a TPR region
Chr5_+_21661444 0.60 AT5G53400.1
HSP20-like chaperones superfamily protein
Chr1_+_7508701 0.60 AT1G21450.1
SCARECROW-like 1
Chr3_+_7946408 0.60 AT3G22420.4
AT3G22420.3
AT3G22420.5
AT3G22420.1
AT3G22420.2
AT3G22420.6
with no lysine (K) kinase 2
Chr3_+_20981316 0.60 AT3G56640.1
exocyst complex component sec15A
Chr5_-_2130509 0.59 AT5G06850.1
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Chr4_-_9589376 0.59 AT4G17040.1
CLP protease R subunit 4
Chr5_+_4122400 0.59 AT5G13010.1
RNA helicase family protein
Chr5_+_21962570 0.59 AT5G54130.2
AT5G54130.3
AT5G54130.4
Calcium-binding endonuclease/exonuclease/phosphatase family
Chr2_+_15501726 0.59 AT2G36910.1
ATP binding cassette subfamily B1
Chr3_+_7812861 0.59 AT3G22150.2
AT3G22150.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_6153982 0.58 AT1G17880.1
basic transcription factor 3
Chr5_-_13482591 0.58 AT5G35210.2
AT5G35210.1
PHD type transcription factor with transmembrane domain protein (PTM)
Chr1_-_10195186 0.58 AT1G29170.3
AT1G29170.1
AT1G29170.2
SCAR family protein
Chr1_+_29298243 0.58 AT1G77920.1
bZIP transcription factor family protein
Chr1_-_6692566 0.58 AT1G19360.2
AT1G19360.1
Nucleotide-diphospho-sugar transferase family protein
Chr5_+_8541713 0.58 AT5G24860.3
AT5G24860.1
flowering promoting factor 1
Chr2_+_9293261 0.58 AT2G21790.1
ribonucleotide reductase 1
Chr5_-_24691095 0.58 AT5G61420.1
AT5G61420.2
myb domain protein 28
Chr3_-_5491332 0.57 AT3G16190.1
Isochorismatase family protein
Chr4_+_994726 0.57 AT4G02280.1
sucrose synthase 3
Chr5_+_21311020 0.57 AT5G52520.1
Class II aaRS and biotin synthetases superfamily protein
Chr4_+_6313914 0.57 AT4G10120.1
AT4G10120.3
Sucrose-phosphate synthase family protein
Chr1_-_18690503 0.57 AT1G50450.1
Saccharopine dehydrogenase
Chr3_+_1086516 0.57 AT3G04140.1
Ankyrin repeat family protein
Chr1_-_28442429 0.57 AT1G75750.2
AT1G75750.1
GAST1 protein homolog 1
Chr2_+_18108289 0.57 AT2G43680.4
AT2G43680.2
AT2G43680.5
AT2G43680.3
IQ-domain 14
Chr1_-_40945 0.57 AT1G01070.2
AT1G01070.1
nodulin MtN21 /EamA-like transporter family protein
Chr3_+_16195848 0.57 AT3G44630.1
AT3G44630.4
AT3G44630.2
AT3G44630.3
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_+_25720172 0.57 AT1G68540.2
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_2163387 0.57 AT1G07040.1
plant/protein
Chr1_+_25508639 0.56 AT1G68050.1
flavin-binding, kelch repeat, f box 1
Chr4_-_712643 0.56 AT4G01670.1
hypothetical protein
Chr2_-_14131143 0.56 AT2G33340.3
AT2G33340.2
AT2G33340.1
MOS4-associated complex 3B
Chr1_-_20948969 0.56 AT1G56010.1
NAC domain containing protein 1
Chr1_+_25719958 0.56 AT1G68540.1
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_-_19375960 0.56 AT3G52240.1
transcriptional regulator ATRX
Chr4_+_14119353 0.56 AT4G28570.1
AT4G28570.2
Long-chain fatty alcohol dehydrogenase family protein
Chr1_-_1343793 0.55 AT1G04780.1
Ankyrin repeat family protein
Chr4_+_16548600 0.55 AT4G34670.1
Ribosomal protein S3Ae
Chr5_-_604682 0.55 AT5G02670.1
hypothetical protein
Chr3_+_7375158 0.55 AT3G21050.1

Chr4_+_285876 0.55 AT4G00700.2
AT4G00700.1
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Chr5_-_17337884 0.55 AT5G43180.1
transmembrane protein, putative (Protein of unknown function, DUF599)

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G69490

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.3 GO:0072708 response to sorbitol(GO:0072708)
0.4 1.3 GO:0055068 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
0.4 1.8 GO:0034763 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.4 2.1 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.3 1.0 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.3 1.0 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.3 1.0 GO:0015696 ammonium transport(GO:0015696)
0.3 1.6 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system(GO:0010201)
0.3 1.5 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.3 1.4 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.3 2.4 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.3 0.3 GO:0018377 N-terminal protein lipidation(GO:0006498) N-terminal protein myristoylation(GO:0006499) protein myristoylation(GO:0018377)
0.3 1.9 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.3 0.8 GO:0071217 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.3 0.8 GO:0098534 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.3 1.3 GO:0009647 skotomorphogenesis(GO:0009647)
0.2 0.7 GO:0018119 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.2 0.7 GO:0032025 response to cobalt ion(GO:0032025)
0.2 1.0 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.2 0.7 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.2 0.7 GO:0046704 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.2 0.7 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.2 1.0 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.2 0.6 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.2 0.6 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.2 1.4 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.2 0.6 GO:0033120 positive regulation of RNA splicing(GO:0033120)
0.2 0.6 GO:0009202 deoxyribonucleoside triphosphate biosynthetic process(GO:0009202)
0.2 1.3 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.2 0.9 GO:1904589 regulation of protein import(GO:1904589)
0.2 0.5 GO:0048451 petal formation(GO:0048451)
0.2 0.7 GO:0006741 NADP biosynthetic process(GO:0006741)
0.2 0.7 GO:0033306 phytol metabolic process(GO:0033306)
0.2 0.9 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.2 0.5 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.2 0.8 GO:0010148 transpiration(GO:0010148)
0.2 0.5 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 0.6 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 0.5 GO:0015904 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.1 0.6 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.1 0.4 GO:0031054 pre-miRNA processing(GO:0031054)
0.1 0.4 GO:0090058 microtubule depolymerization(GO:0007019) metaxylem development(GO:0090058)
0.1 1.0 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.1 0.4 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.1 0.4 GO:0035017 cuticle pattern formation(GO:0035017)
0.1 0.4 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.1 0.7 GO:0046713 borate transport(GO:0046713)
0.1 0.3 GO:0043271 negative regulation of ion transport(GO:0043271)
0.1 0.9 GO:0006570 tyrosine metabolic process(GO:0006570)
0.1 0.4 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.4 GO:0034727 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.1 0.4 GO:1902000 homogentisate metabolic process(GO:1901999) homogentisate catabolic process(GO:1902000)
0.1 0.4 GO:1990882 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.1 0.4 GO:0019483 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859)
0.1 1.0 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.1 0.7 GO:1904961 quiescent center organization(GO:1904961)
0.1 0.6 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.1 1.1 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.6 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 0.4 GO:0070537 histone H2A K63-linked deubiquitination(GO:0070537)
0.1 0.5 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 1.1 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 1.0 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.1 0.3 GO:0009915 phloem sucrose loading(GO:0009915)
0.1 0.3 GO:0051447 negative regulation of meiotic nuclear division(GO:0045835) negative regulation of meiotic cell cycle(GO:0051447)
0.1 0.6 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.1 1.1 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.1 1.1 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.1 0.3 GO:0071494 cellular response to UV-C(GO:0071494)
0.1 0.2 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.3 GO:0090239 regulation of histone H4 acetylation(GO:0090239)
0.1 1.0 GO:0070370 cellular heat acclimation(GO:0070370)
0.1 0.2 GO:0007097 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023) nucleus localization(GO:0051647)
0.1 0.5 GO:0051318 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.1 0.4 GO:0007032 endosome organization(GO:0007032)
0.1 0.4 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 0.2 GO:0051099 positive regulation of binding(GO:0051099)
0.1 0.6 GO:0043480 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 0.4 GO:0015669 gas transport(GO:0015669)
0.1 0.3 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.1 2.3 GO:0010207 photosystem II assembly(GO:0010207)
0.1 0.9 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.1 0.4 GO:0016139 glycoside catabolic process(GO:0016139)
0.1 0.4 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 1.4 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.1 0.7 GO:0032781 positive regulation of ATPase activity(GO:0032781)
0.1 0.5 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.1 0.4 GO:0006527 arginine catabolic process(GO:0006527)
0.1 0.3 GO:0000492 box C/D snoRNP assembly(GO:0000492) regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.1 0.3 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.1 0.3 GO:1901601 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.1 0.3 GO:0072526 pyridine-containing compound catabolic process(GO:0072526)
0.1 0.4 GO:0010390 histone monoubiquitination(GO:0010390)
0.1 0.6 GO:2000601 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.1 0.3 GO:0006788 heme oxidation(GO:0006788)
0.1 0.3 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.1 0.5 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.9 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 1.0 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.1 1.0 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.1 0.6 GO:0009610 response to symbiotic fungus(GO:0009610)
0.1 0.5 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.5 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 0.4 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.6 GO:0010225 response to UV-C(GO:0010225)
0.1 0.4 GO:0009963 positive regulation of flavonoid biosynthetic process(GO:0009963)
0.1 0.3 GO:0042178 xenobiotic catabolic process(GO:0042178)
0.1 0.1 GO:0051189 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.1 0.5 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.1 0.6 GO:0009819 drought recovery(GO:0009819)
0.1 1.1 GO:0010540 basipetal auxin transport(GO:0010540)
0.1 0.3 GO:0042989 sequestering of actin monomers(GO:0042989)
0.1 1.4 GO:0009306 protein secretion(GO:0009306)
0.1 0.7 GO:0010088 phloem development(GO:0010088)
0.1 1.2 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380)
0.1 0.3 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.1 1.5 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.1 0.5 GO:0046835 carbohydrate phosphorylation(GO:0046835)
0.1 0.2 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.1 1.7 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.1 0.3 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.1 0.3 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.1 0.3 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.1 0.3 GO:0006855 drug transmembrane transport(GO:0006855)
0.1 0.4 GO:0009643 photosynthetic acclimation(GO:0009643)
0.1 2.5 GO:0016145 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.1 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
0.1 0.6 GO:0010098 suspensor development(GO:0010098)
0.1 0.1 GO:0006561 proline biosynthetic process(GO:0006561)
0.1 0.6 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.1 0.8 GO:0016559 peroxisome fission(GO:0016559)
0.1 0.5 GO:0031936 negative regulation of chromatin silencing(GO:0031936)
0.1 0.7 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1 1.1 GO:0072505 divalent inorganic anion homeostasis(GO:0072505)
0.1 0.1 GO:0009660 amyloplast organization(GO:0009660)
0.1 2.9 GO:0072665 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.1 0.5 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.1 0.2 GO:0010269 response to selenium ion(GO:0010269)
0.1 0.5 GO:0045903 positive regulation of translational fidelity(GO:0045903)
0.1 1.4 GO:0009269 response to desiccation(GO:0009269)
0.1 0.3 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.1 0.1 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.1 0.7 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.1 0.4 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.1 0.7 GO:0071514 regulation of gene expression by genetic imprinting(GO:0006349) genetic imprinting(GO:0071514)
0.1 0.7 GO:0009638 phototropism(GO:0009638)
0.1 0.4 GO:0009298 GDP-mannose biosynthetic process(GO:0009298)
0.1 0.5 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.1 0.7 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.5 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 0.2 GO:0046203 spermidine catabolic process(GO:0046203)
0.1 0.4 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.0 0.2 GO:0010219 regulation of vernalization response(GO:0010219)
0.0 1.9 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.4 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.0 0.2 GO:0015074 DNA integration(GO:0015074)
0.0 0.3 GO:0048629 trichome patterning(GO:0048629)
0.0 0.2 GO:0010155 regulation of proton transport(GO:0010155)
0.0 0.7 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.9 GO:0005983 starch catabolic process(GO:0005983)
0.0 0.6 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.0 0.4 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.0 0.2 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 0.3 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.0 0.1 GO:0046505 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.0 0.2 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.0 0.9 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.7 GO:0009089 lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 1.6 GO:0046283 anthocyanin-containing compound metabolic process(GO:0046283)
0.0 1.0 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.6 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.2 GO:0046146 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.0 0.3 GO:0090421 embryonic meristem initiation(GO:0090421)
0.0 1.1 GO:0010109 regulation of photosynthesis(GO:0010109)
0.0 0.0 GO:0098763 cell cycle phase(GO:0022403) biological phase(GO:0044848) mitotic cell cycle phase(GO:0098763)
0.0 0.2 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.3 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.2 GO:0048442 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.0 1.4 GO:0009682 induced systemic resistance(GO:0009682)
0.0 0.2 GO:0046500 S-adenosylmethionine metabolic process(GO:0046500)
0.0 0.1 GO:0080093 regulation of photorespiration(GO:0080093)
0.0 0.3 GO:0051014 actin filament severing(GO:0051014)
0.0 1.4 GO:0016128 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.0 0.1 GO:0018315 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)
0.0 0.4 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.6 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.2 GO:0046113 purine nucleobase catabolic process(GO:0006145) nucleobase catabolic process(GO:0046113)
0.0 0.1 GO:0071431 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.0 0.2 GO:0010325 raffinose family oligosaccharide biosynthetic process(GO:0010325)
0.0 0.6 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.9 GO:0007030 Golgi organization(GO:0007030)
0.0 0.2 GO:0034629 protein complex localization(GO:0031503) cellular protein complex localization(GO:0034629)
0.0 0.1 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.0 0.2 GO:0015846 polyamine transport(GO:0015846)
0.0 0.2 GO:0042128 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.0 1.2 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.5 GO:0051555 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.0 0.4 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.0 1.0 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.3 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.5 GO:0015976 carbon utilization(GO:0015976)
0.0 1.3 GO:2000028 regulation of photoperiodism, flowering(GO:2000028)
0.0 0.3 GO:2000816 mitotic spindle assembly checkpoint(GO:0007094) spindle checkpoint(GO:0031577) negative regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032435) negative regulation of sister chromatid segregation(GO:0033046) negative regulation of mitotic sister chromatid segregation(GO:0033048) negative regulation of mitotic metaphase/anaphase transition(GO:0045841) negative regulation of chromosome segregation(GO:0051985) spindle assembly checkpoint(GO:0071173) mitotic spindle checkpoint(GO:0071174) negative regulation of proteasomal protein catabolic process(GO:1901799) negative regulation of metaphase/anaphase transition of cell cycle(GO:1902100) negative regulation of proteolysis involved in cellular protein catabolic process(GO:1903051) negative regulation of cellular protein catabolic process(GO:1903363) negative regulation of mitotic sister chromatid separation(GO:2000816)
0.0 0.2 GO:0070828 heterochromatin organization(GO:0070828)
0.0 0.2 GO:0042659 regulation of cell fate specification(GO:0042659)
0.0 0.2 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 1.4 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.3 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.0 0.6 GO:0015740 C4-dicarboxylate transport(GO:0015740)
0.0 0.4 GO:0044030 regulation of DNA methylation(GO:0044030)
0.0 0.2 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.2 GO:0034204 lipid translocation(GO:0034204)
0.0 0.3 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.4 GO:0046352 disaccharide catabolic process(GO:0046352)
0.0 1.3 GO:0009853 photorespiration(GO:0009853)
0.0 0.4 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.0 0.6 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.0 1.7 GO:0006972 hyperosmotic response(GO:0006972)
0.0 0.2 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.0 0.5 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.3 GO:0098781 ncRNA transcription(GO:0098781)
0.0 0.4 GO:0009704 de-etiolation(GO:0009704)
0.0 0.2 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.1 GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement(GO:1901527)
0.0 0.5 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.0 0.7 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.0 0.5 GO:0051260 protein homooligomerization(GO:0051260)
0.0 0.1 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.0 0.2 GO:1990641 response to iron ion starvation(GO:1990641)
0.0 0.7 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.0 0.8 GO:0010286 heat acclimation(GO:0010286)
0.0 1.7 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.2 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.1 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.0 0.4 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.3 GO:0007143 female meiotic division(GO:0007143)
0.0 0.1 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.0 0.2 GO:0034311 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.0 0.2 GO:1990170 positive regulation of cell differentiation(GO:0045597) stress response to cadmium ion(GO:1990170)
0.0 0.1 GO:0071490 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.0 2.1 GO:0009909 regulation of flower development(GO:0009909)
0.0 0.7 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.0 0.8 GO:0000741 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.5 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.0 0.6 GO:0080022 primary root development(GO:0080022)
0.0 0.5 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.2 GO:0045116 protein neddylation(GO:0045116)
0.0 0.1 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.2 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.0 0.2 GO:0031222 arabinan catabolic process(GO:0031222)
0.0 0.1 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.0 0.1 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.0 0.1 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.0 0.1 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.0 0.2 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.2 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.2 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.2 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.0 0.3 GO:0032544 plastid translation(GO:0032544)
0.0 0.2 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.0 GO:0009120 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.0 0.2 GO:0006828 manganese ion transport(GO:0006828)
0.0 0.2 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.0 0.4 GO:0006744 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 1.1 GO:0009742 brassinosteroid mediated signaling pathway(GO:0009742) steroid hormone mediated signaling pathway(GO:0043401) cellular response to steroid hormone stimulus(GO:0071383)
0.0 0.2 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.1 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.0 0.3 GO:0001708 cell fate specification(GO:0001708)
0.0 0.1 GO:0071051 nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'(GO:0034427) U4 snRNA 3'-end processing(GO:0034475) polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.0 0.3 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.5 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.3 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.2 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 0.5 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.6 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.2 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.0 0.2 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.9 GO:0006413 translational initiation(GO:0006413)
0.0 0.5 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.0 0.2 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 0.3 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.5 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.2 GO:1990748 cellular oxidant detoxification(GO:0098869) cellular detoxification(GO:1990748)
0.0 0.0 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.0 0.8 GO:0010026 trichome differentiation(GO:0010026)
0.0 0.1 GO:0006552 leucine catabolic process(GO:0006552)
0.0 0.9 GO:0007034 vacuolar transport(GO:0007034)
0.0 1.0 GO:0048193 Golgi vesicle transport(GO:0048193)
0.0 0.4 GO:0016556 mRNA modification(GO:0016556)
0.0 0.0 GO:0071242 cellular response to ammonium ion(GO:0071242)
0.0 0.1 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.6 GO:0061077 chaperone-mediated protein folding(GO:0061077)
0.0 0.9 GO:0007018 microtubule-based movement(GO:0007018)
0.0 1.2 GO:0018105 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.0 0.3 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.1 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.0 0.2 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.1 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.3 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.1 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 0.5 GO:0090305 nucleic acid phosphodiester bond hydrolysis(GO:0090305)
0.0 0.2 GO:0007093 mitotic cell cycle checkpoint(GO:0007093)
0.0 0.1 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.1 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.0 0.1 GO:0019856 pyrimidine nucleobase biosynthetic process(GO:0019856)
0.0 0.1 GO:0009688 abscisic acid biosynthetic process(GO:0009688) apocarotenoid biosynthetic process(GO:0043289) tertiary alcohol biosynthetic process(GO:1902645)
0.0 0.1 GO:0052544 defense response by callose deposition in cell wall(GO:0052544)
0.0 0.0 GO:0048446 petal morphogenesis(GO:0048446)
0.0 0.7 GO:0080147 root hair cell development(GO:0080147)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0031897 Tic complex(GO:0031897)
0.3 0.8 GO:0005813 centrosome(GO:0005813) centriole(GO:0005814)
0.2 0.7 GO:0016328 lateral plasma membrane(GO:0016328)
0.2 2.3 GO:0031519 PcG protein complex(GO:0031519)
0.2 1.6 GO:0009368 endopeptidase Clp complex(GO:0009368)
0.2 0.5 GO:0005775 vacuolar lumen(GO:0005775)
0.2 0.8 GO:0000812 Swr1 complex(GO:0000812)
0.2 0.6 GO:0009509 chromoplast(GO:0009509)
0.1 0.6 GO:0042788 polysomal ribosome(GO:0042788)
0.1 0.5 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.1 1.2 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.1 0.3 GO:1990298 bub1-bub3 complex(GO:1990298)
0.1 0.4 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.1 0.6 GO:0055038 recycling endosome membrane(GO:0055038)
0.1 2.1 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.1 0.6 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 0.5 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.1 0.6 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.1 0.2 GO:0097361 CIA complex(GO:0097361)
0.1 0.8 GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.1 0.4 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 0.3 GO:0034271 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.1 1.1 GO:0010287 plastoglobule(GO:0010287)
0.1 0.3 GO:0030286 dynein complex(GO:0030286)
0.1 0.4 GO:0070552 BRISC complex(GO:0070552)
0.1 0.2 GO:0031080 nuclear pore outer ring(GO:0031080)
0.1 0.6 GO:0031209 SCAR complex(GO:0031209)
0.1 0.5 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.1 0.5 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.1 0.3 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1 1.0 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.9 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.1 0.5 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.3 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.0 0.2 GO:0005640 nuclear outer membrane(GO:0005640)
0.0 0.3 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.0 0.2 GO:0032807 DNA ligase IV complex(GO:0032807)
0.0 0.4 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.0 1.1 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 6.2 GO:0000790 nuclear chromatin(GO:0000790)
0.0 1.0 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.0 2.6 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.5 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 0.6 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.4 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.2 GO:0009527 plastid outer membrane(GO:0009527)
0.0 0.2 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 0.3 GO:0000124 SAGA complex(GO:0000124)
0.0 0.2 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.0 0.6 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.0 0.3 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0 0.8 GO:0042651 thylakoid membrane(GO:0042651)
0.0 0.3 GO:0042575 DNA polymerase complex(GO:0042575)
0.0 0.7 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.5 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.5 GO:0009531 secondary cell wall(GO:0009531)
0.0 0.6 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.2 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.7 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.7 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.3 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.6 GO:1902554 serine/threonine protein kinase complex(GO:1902554)
0.0 0.5 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.3 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 0.2 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 1.4 GO:0005770 late endosome(GO:0005770)
0.0 3.9 GO:0000325 plant-type vacuole(GO:0000325)
0.0 0.6 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.5 GO:0000178 exosome (RNase complex)(GO:0000178)
0.0 0.2 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 0.3 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.5 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.0 0.1 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.0 0.3 GO:0000776 kinetochore(GO:0000776)
0.0 1.7 GO:0005635 nuclear envelope(GO:0005635)
0.0 0.2 GO:1903561 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 7.5 GO:0009534 chloroplast thylakoid(GO:0009534)
0.0 0.1 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.0 0.6 GO:0009504 cell plate(GO:0009504)
0.0 0.3 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.4 GO:0009579 thylakoid(GO:0009579)
0.0 0.1 GO:0000796 condensin complex(GO:0000796)
0.0 0.7 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 1.4 GO:0005667 transcription factor complex(GO:0005667)
0.0 0.2 GO:0016272 prefoldin complex(GO:0016272)
0.0 0.2 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.0 0.2 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 0.1 GO:0030141 secretory granule(GO:0030141)
0.0 1.7 GO:0033648 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 0.2 GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.0 1.5 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.2 GO:0030134 ER to Golgi transport vesicle(GO:0030134)
0.0 0.6 GO:0010008 endosome membrane(GO:0010008)
0.0 1.8 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 2.8 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.4 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.0 0.7 GO:0045271 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.1 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.1 GO:0098562 cytoplasmic side of membrane(GO:0098562)
0.0 0.9 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.1 GO:0005769 early endosome(GO:0005769)
0.0 0.1 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 0.4 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.1 GO:0005761 mitochondrial ribosome(GO:0005761)
0.0 1.5 GO:0005681 spliceosomal complex(GO:0005681)
0.0 0.5 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.1 GO:0000346 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.0 2.6 GO:0005802 trans-Golgi network(GO:0005802)
0.0 28.4 GO:0005829 cytosol(GO:0005829)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.1 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.5 3.0 GO:0070547 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.5 1.4 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.4 1.3 GO:0015099 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.3 1.0 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.3 1.3 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.3 0.8 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.3 0.8 GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.3 1.0 GO:0050162 oxalate oxidase activity(GO:0050162)
0.2 0.7 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.2 0.7 GO:0050502 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.2 1.8 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.2 1.3 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.2 0.6 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.2 0.5 GO:0016643 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.2 0.7 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.2 1.4 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.2 0.5 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.2 0.5 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.2 0.7 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.2 0.7 GO:0033862 UMP kinase activity(GO:0033862)
0.2 0.7 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.2 0.6 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.2 0.6 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.2 0.5 GO:0035671 enone reductase activity(GO:0035671)
0.2 0.8 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.2 0.6 GO:0052593 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.1 0.6 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.1 1.0 GO:0018822 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.1 0.6 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.1 0.7 GO:0016463 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.1 0.1 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 0.6 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.1 0.7 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.1 1.0 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.1 2.3 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.4 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.1 0.4 GO:0005344 oxygen transporter activity(GO:0005344)
0.1 0.5 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.1 0.5 GO:0016034 maleylacetoacetate isomerase activity(GO:0016034)
0.1 0.5 GO:0004335 galactokinase activity(GO:0004335)
0.1 0.6 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.3 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.1 0.5 GO:0008493 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.4 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.1 0.3 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 2.8 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 2.3 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 0.4 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.1 0.1 GO:0045181 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.1 0.3 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.1 0.8 GO:0004340 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 1.1 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.1 0.6 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 0.3 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.1 0.3 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.1 0.4 GO:0008686 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.1 0.4 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.1 0.3 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.1 0.6 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.4 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.1 0.3 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.1 0.6 GO:0005047 signal recognition particle binding(GO:0005047)
0.1 0.7 GO:0019137 thioglucosidase activity(GO:0019137)
0.1 1.2 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.3 GO:0045430 chalcone isomerase activity(GO:0045430)
0.1 0.3 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.1 0.6 GO:0071933 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.1 0.2 GO:0010331 gibberellin binding(GO:0010331)
0.1 0.5 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.3 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.1 0.3 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.1 0.5 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.1 0.9 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.1 0.5 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.1 0.5 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.2 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.1 0.2 GO:0008481 sphinganine kinase activity(GO:0008481)
0.1 0.3 GO:0003785 actin monomer binding(GO:0003785)
0.1 1.1 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 0.2 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.1 0.2 GO:0016971 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.1 2.6 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 3.3 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 1.1 GO:0035064 methylated histone binding(GO:0035064)
0.1 4.0 GO:0080043 quercetin 3-O-glucosyltransferase activity(GO:0080043)
0.1 0.5 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.5 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.1 0.3 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.1 0.6 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.1 0.3 GO:0051959 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.1 0.2 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 0.2 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 0.8 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.1 0.9 GO:0016896 3'-5'-exoribonuclease activity(GO:0000175) exoribonuclease activity(GO:0004532) exoribonuclease activity, producing 5'-phosphomonoesters(GO:0016896)
0.1 7.5 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 0.3 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.1 0.4 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 0.3 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.3 GO:0001664 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.1 1.0 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.1 0.7 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.2 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.1 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.1 0.3 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.1 0.3 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.1 0.9 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 0.1 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.0 0.5 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.0 0.4 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.0 0.2 GO:0070034 telomerase RNA binding(GO:0070034)
0.0 0.3 GO:0001671 ATPase activator activity(GO:0001671)
0.0 0.8 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.4 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.3 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.2 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.0 0.3 GO:0009884 cytokinin receptor activity(GO:0009884)
0.0 0.2 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.0 0.2 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.0 0.4 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.0 0.6 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 1.4 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.4 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.0 0.2 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 0.2 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.0 0.3 GO:0004096 catalase activity(GO:0004096)
0.0 0.2 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.0 0.7 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.2 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 2.0 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.1 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.0 0.3 GO:0030594 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.0 0.4 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.0 0.2 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.0 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.0 0.1 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.0 0.4 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.2 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 1.9 GO:0016278 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.0 0.3 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.0 0.7 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.3 GO:0004471 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471)
0.0 0.4 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 0.4 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 2.9 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.6 GO:0008641 small protein activating enzyme activity(GO:0008641)
0.0 0.3 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.0 0.5 GO:0003951 NAD+ kinase activity(GO:0003951)
0.0 0.2 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.0 0.2 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.9 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.0 0.4 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.0 0.2 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.0 0.4 GO:0002020 protease binding(GO:0002020)
0.0 1.9 GO:0043621 protein self-association(GO:0043621)
0.0 0.2 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.9 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.4 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.2 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.0 0.5 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.2 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.0 0.2 GO:0052854 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.0 0.1 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.0 0.1 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 0.3 GO:0008199 ferric iron binding(GO:0008199)
0.0 0.1 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.0 0.1 GO:0004112 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.0 0.1 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.0 0.3 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.2 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 0.6 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 0.4 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.4 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 0.2 GO:0015175 neutral amino acid transmembrane transporter activity(GO:0015175)
0.0 0.1 GO:0034595 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity(GO:0004439) phosphatidylinositol phosphate 5-phosphatase activity(GO:0034595)
0.0 2.0 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.1 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.1 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.0 0.1 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.0 0.1 GO:0052692 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.0 0.3 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.1 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.0 0.2 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.1 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.0 0.4 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.2 GO:0051087 chaperone binding(GO:0051087)
0.0 0.2 GO:0004300 enoyl-CoA hydratase activity(GO:0004300)
0.0 0.2 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 0.3 GO:0004629 phospholipase C activity(GO:0004629)
0.0 0.2 GO:0046592 polyamine oxidase activity(GO:0046592)
0.0 0.2 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.2 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 0.1 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.6 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.3 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 0.2 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.2 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.0 0.1 GO:0033984 indole-3-glycerol-phosphate lyase activity(GO:0033984)
0.0 1.7 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.2 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.4 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.0 0.1 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.0 0.1 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.1 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 1.1 GO:0009931 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.4 GO:0019887 protein kinase regulator activity(GO:0019887)
0.0 0.3 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.1 GO:0030151 molybdenum ion binding(GO:0030151)
0.0 0.5 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.0 0.6 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.0 0.4 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.4 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.1 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.0 0.6 GO:0071949 FAD binding(GO:0071949)
0.0 0.5 GO:0016597 amino acid binding(GO:0016597)
0.0 2.7 GO:0043531 ADP binding(GO:0043531)
0.0 0.5 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.0 0.1 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.0 0.0 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.0 0.3 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.2 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.0 0.1 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.0 0.9 GO:0042393 histone binding(GO:0042393)
0.0 0.1 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.2 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.5 GO:0050897 cobalt ion binding(GO:0050897)
0.0 0.2 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 0.1 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.0 3.8 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.9 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 2.2 GO:0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances(GO:0016820) ATPase activity, coupled to transmembrane movement of substances(GO:0042626) ATPase activity, coupled to movement of substances(GO:0043492)
0.0 0.1 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.0 0.1 GO:0016615 malate dehydrogenase activity(GO:0016615)
0.0 0.1 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.2 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.0 1.4 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.0 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.0 0.3 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.1 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.0 0.2 GO:0016782 transferase activity, transferring sulfur-containing groups(GO:0016782)
0.0 0.6 GO:0016875 aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876)
0.0 5.3 GO:0008270 zinc ion binding(GO:0008270)
0.0 0.1 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
0.0 0.3 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.1 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.0 0.1 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.0 0.3 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.2 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 1.3 GO:0003779 actin binding(GO:0003779)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 PID ENDOTHELIN PATHWAY Endothelins
0.3 0.8 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.2 1.0 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.2 0.5 PID RAS PATHWAY Regulation of Ras family activation
0.1 0.3 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.1 0.3 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.0 0.2 PID S1P S1P1 PATHWAY S1P1 pathway
0.0 0.4 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.0 0.3 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.2 PID AP1 PATHWAY AP-1 transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.6 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.3 0.9 REACTOME ARMS MEDIATED ACTIVATION Genes involved in ARMS-mediated activation
0.3 0.8 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.2 0.6 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.4 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.1 0.4 REACTOME MTORC1 MEDIATED SIGNALLING Genes involved in mTORC1-mediated signalling
0.1 0.4 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.1 0.5 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.1 0.7 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.1 0.2 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.1 0.6 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.1 0.2 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.1 0.4 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 0.3 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.1 0.3 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.0 0.3 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.0 1.2 REACTOME TRANSMEMBRANE TRANSPORT OF SMALL MOLECULES Genes involved in Transmembrane transport of small molecules
0.0 0.1 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.0 0.3 REACTOME RNA POL II PRE TRANSCRIPTION EVENTS Genes involved in RNA Polymerase II Pre-transcription Events
0.0 0.5 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.0 0.2 REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION Genes involved in Influenza Viral RNA Transcription and Replication
0.0 0.1 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER