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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G65910

Z-value: 1.29

Transcription factors associated with AT1G65910

Gene Symbol Gene ID Gene Info
AT1G65910
AT1G65910 NAC domain containing protein 28

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC028arTal_v1_Chr1_-_24524260_24524260-0.563.9e-02Click!

Activity profile of AT1G65910 motif

Sorted Z-values of AT1G65910 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_23308680 2.59 AT5G57560.1
TCH4
Xyloglucan endotransglucosylase/hydrolase family protein
Chr1_-_4835089 2.08 AT1G14120.2
AT1G14120.1
AT1G14120.3
AT1G14120
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_-_7388512 2.07 AT1G21100.1
IGMT1
O-methyltransferase family protein
Chr3_-_3993886 1.99 AT3G12580.1
HSP70
heat shock protein 70
Chr4_+_12137995 1.96 AT4G23180.1
AT4G23180.3
AT4G23180.2
CRK10
cysteine-rich RLK (RECEPTOR-like protein kinase) 10
Chr2_+_12588191 1.91 AT2G29300.2
AT2G29300.1
AT2G29300
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_24558322 1.89 AT1G65970.1
TPX2
thioredoxin-dependent peroxidase 2
Chr2_-_7919345 1.82 AT2G18193.1
AT2G18193
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_16789780 1.79 AT3G45730.1
AT3G45730
hypothetical protein
Chr4_-_17571743 1.79 AT4G37370.1
CYP81D8
cytochrome P450, family 81, subfamily D, polypeptide 8
Chr5_+_21352557 1.74 AT5G52640.1
HSP90.1
heat shock-like protein
Chr4_+_11150049 1.73 AT4G20820.1
AT4G20820
FAD-binding Berberine family protein
Chr3_+_10538005 1.72 AT3G28270.2
AT3G28270.1
AT3G28270
transmembrane protein, putative (DUF677)
Chr2_-_8533779 1.71 AT2G19800.1
MIOX2
myo-inositol oxygenase 2
Chr1_-_23137254 1.71 AT1G62510.1
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_15167859 1.71 AT5G38020.2
AT5G38020.1
AT5G38020
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_+_16108235 1.70 AT2G38470.1
WRKY33
WRKY DNA-binding protein 33
Chr3_+_17879542 1.67 AT3G48280.1
CYP71A25
cytochrome P450, family 71, subfamily A, polypeptide 25
Chr1_-_10720843 1.66 AT1G30370.1
DLAH
alpha/beta-Hydrolases superfamily protein
Chr4_+_13128394 1.63 AT4G25810.1
XTR6
xyloglucan endotransglycosylase 6
Chr2_-_15421866 1.58 AT2G36790.1
UGT73C6
UDP-glucosyl transferase 73C6
Chr5_-_216773 1.56 AT5G01550.1
LECRKA4.2
lectin receptor kinase a4.1
Chr4_+_418327 1.56 AT4G00970.1
AT4G00970.2
CRK41
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Chr1_+_11928757 1.54 AT1G32920.1
AT1G32920
hypothetical protein
Chr4_-_7494234 1.52 AT4G12735.1
AT4G12735
hypothetical protein
Chr1_+_5204312 1.50 AT1G15125.1
AT1G15125.2
AT1G15125
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_-_14541617 1.49 AT2G34500.1
CYP710A1
cytochrome P450, family 710, subfamily A, polypeptide 1
Chr1_-_1702749 1.46 AT1G05675.1
AT1G05675
UDP-Glycosyltransferase superfamily protein
Chr1_-_2747936 1.46 AT1G08630.6
AT1G08630.7
AT1G08630.5
AT1G08630.2
THA1
threonine aldolase 1
Chr1_-_9143336 1.43 AT1G26420.1
AT1G26420
FAD-binding Berberine family protein
Chr3_+_7906521 1.43 AT3G22370.1
AOX1A
alternative oxidase 1A
Chr2_-_1339468 1.43 AT2G04050.1
AT2G04050
MATE efflux family protein
Chr1_+_3664187 1.42 AT1G10960.1
FD1
ferredoxin 1
Chr2_+_15706285 1.40 AT2G37430.1
ZAT11
C2H2 and C2HC zinc fingers superfamily protein
Chr5_+_9050660 1.39 AT5G25930.1
AT5G25930
kinase family with leucine-rich repeat domain-containing protein
Chr2_-_8913747 1.38 AT2G20670.1
AT2G20670
sugar phosphate exchanger, putative (DUF506)
Chr2_+_17854557 1.37 AT2G42900.1
AT2G42900
Plant basic secretory protein (BSP) family protein
Chr2_-_8370675 1.37 AT2G19310.1
AT2G19310
HSP20-like chaperones superfamily protein
Chr4_-_14820595 1.36 AT4G30270.1
XTH24
xyloglucan endotransglucosylase/hydrolase 24
Chr4_+_16354857 1.35 AT4G34150.1
AT4G34150
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr3_-_15953346 1.33 AT3G44260.1
CAF1a
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr3_+_8703220 1.31 AT3G24100.1
AT3G24100
Uncharacterized protein family SERF
Chr1_-_27265806 1.28 AT1G72430.1
AT1G72430
SAUR-like auxin-responsive protein family
Chr1_+_27308513 1.28 AT1G72520.1
LOX4
PLAT/LH2 domain-containing lipoxygenase family protein
Chr1_-_26295609 1.26 AT1G69840.6
AT1G69840.3
AT1G69840.2
AT1G69840.5
AT1G69840.7
AT1G69840.1
AT1G69840.4
AT1G69840
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr3_+_20776220 1.26 AT3G55980.2
AT3G55980.1
SZF1
salt-inducible zinc finger 1
Chr3_+_16896166 1.24 AT3G45970.2
AT3G45970.1
EXLA1
expansin-like A1
Chr4_-_8273903 1.24 AT4G14365.1
XBAT34
hypothetical protein
Chr5_-_14999619 1.24 AT5G37770.1
AT5G37770.2
TCH2
EF hand calcium-binding protein family
Chr4_-_14827211 1.23 AT4G30280.1
XTH18
xyloglucan endotransglucosylase/hydrolase 18
Chr3_+_20354351 1.21 AT3G54940.3
AT3G54940.2
AT3G54940
Papain family cysteine protease
Chr3_+_8918679 1.20 AT3G24500.2
MBF1C
multiprotein bridging factor 1C
Chr1_+_6568002 1.20 AT1G19020.1
AT1G19020
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Chr1_+_24824356 1.19 AT1G66540.1
AT1G66540.2
AT1G66540
Cytochrome P450 superfamily protein
Chr1_-_20706893 1.19 AT1G55450.2
AT1G55450
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_+_9827682 1.19 AT3G26740.1
CCL
CCR-like protein
Chr2_-_10737800 1.18 AT2G25200.1
AT2G25200
hypothetical protein (DUF868)
Chr2_+_14577083 1.17 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
Chr1_+_26705420 1.17 AT1G70820.1
AT1G70820.2
AT1G70820
phosphoglucomutase, putative / glucose phosphomutase
Chr1_-_8399836 1.17 AT1G23740.1
AOR
Oxidoreductase, zinc-binding dehydrogenase family protein
Chr1_-_20707071 1.16 AT1G55450.1
AT1G55450
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_13297695 1.16 AT4G26260.1
AT4G26260.2
MIOX4
myo-inositol oxygenase 4
Chr3_+_8918267 1.15 AT3G24500.1
MBF1C
multiprotein bridging factor 1C
Chr3_-_21008064 1.15 AT3G56710.1
AT3G56710.2
SIB1
sigma factor binding protein 1
Chr2_-_11284211 1.15 AT2G26530.2
AT2G26530.1
AR781
AR781, pheromone receptor-like protein (DUF1645)
Chr1_+_1164910 1.15 AT1G04350.1
AT1G04350
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_-_19693845 1.14 AT5G48570.1
AT5G48570
FKBP-type peptidyl-prolyl cis-trans isomerase family protein
Chr2_+_12326808 1.14 AT2G28720.1
AT2G28720
Histone superfamily protein
Chr4_-_12170055 1.14 AT4G23260.1
AT4G23260.2
CRK18
cysteine-rich RLK (RECEPTOR-like protein kinase) 18
Chr2_+_9792166 1.14 AT2G23000.2
AT2G23000.1
scpl10
serine carboxypeptidase-like 10
Chr3_+_18929526 1.13 AT3G50930.1
BCS1
cytochrome BC1 synthesi
Chr5_+_7168106 1.12 AT5G21100.1
AT5G21100
Plant L-ascorbate oxidase
Chr4_+_10481619 1.11 AT4G19170.1
NCED4
nine-cis-epoxycarotenoid dioxygenase 4
Chr1_+_27736546 1.11 AT1G73750.2
AT1G73750.1
AT1G73750
alpha/beta hydrolase family protein
Chr1_+_5977323 1.11 AT1G17420.1
LOX3
lipoxygenase 3
Chr2_+_3618058 1.10 AT2G08986.1
AT2G08986
hypothetical protein
Chr2_+_9254378 1.09 AT2G21640.1
AT2G21640
marker for oxidative stress response protein
Chr2_+_13036814 1.09 AT2G30600.4
AT2G30600.5
AT2G30600.1
AT2G30600.3
AT2G30600
BTB/POZ domain-containing protein
Chr3_-_18649521 1.09 AT3G50310.1
MAPKKK20
mitogen-activated protein kinase kinase kinase 20
Chr1_+_4084162 1.09 AT1G12080.1
AT1G12080.2
AT1G12080
Vacuolar calcium-binding protein-like protein
Chr5_-_17099595 1.09 AT5G42650.1
AOS
allene oxide synthase
Chr2_+_14573030 1.09 AT2G34600.1
JAZ7
jasmonate-zim-domain protein 7
Chr5_-_26906517 1.08 AT5G67420.1
AT5G67420.2
LBD37
LOB domain-containing protein 37
Chr2_+_13037238 1.08 AT2G30600.6
AT2G30600.2
AT2G30600
BTB/POZ domain-containing protein
Chr5_+_26710302 1.07 AT5G66880.1
SNRK2.3
sucrose nonfermenting 1(SNF1)-related protein kinase 2.3
Chr5_+_26710469 1.06 AT5G66880.2
SNRK2.3
sucrose nonfermenting 1(SNF1)-related protein kinase 2.3
Chr5_+_23734273 1.06 AT5G58770.1
cPT4
Undecaprenyl pyrophosphate synthetase family protein
Chr2_+_13820909 1.06 AT2G32550.3
AT2G32550.1
AT2G32550
Cell differentiation, Rcd1-like protein
Chr5_-_23230749 1.06 AT5G57345.1
AT5G57345
transmembrane protein
Chr4_+_12134973 1.06 AT4G23170.1
EP1
receptor-like protein kinase-related family protein
Chr2_+_10066117 1.06 AT2G23680.2
AT2G23680.1
AT2G23680
Cold acclimation protein WCOR413 family
Chr3_+_5249112 1.05 AT3G15518.1
AT3G15518
hypothetical protein
Chr1_-_9140439 1.05 AT1G26410.1
AT1G26410
FAD-binding Berberine family protein
Chr3_+_1172687 1.05 AT3G04420.2
AT3G04420.1
NAC048
NAC domain containing protein 48
Chr5_+_430858 1.04 AT5G02180.1
AT5G02180.2
AT5G02180
Transmembrane amino acid transporter family protein
Chr5_+_427642 1.04 AT5G02170.1
AT5G02170.2
AT5G02170
Transmembrane amino acid transporter family protein
Chr5_+_3267635 1.04 AT5G10380.1
RING1
RING/U-box superfamily protein
Chr1_+_8395466 1.03 AT1G23730.2
AT1G23730.1
BCA3
beta carbonic anhydrase 3
Chr5_+_3377652 1.02 AT5G10695.1
AT5G10695.2
AT5G10695
methionyl-tRNA synthetase
Chr1_+_24637196 1.02 AT1G66160.2
AT1G66160.1
CMPG1
CYS, MET, PRO, and GLY protein 1
Chr5_+_3206140 1.02 AT5G10210.1
AT5G10210
nitric oxide synthase-interacting protein
Chr4_-_10591546 1.02 AT4G19420.3
AT4G19420.2
AT4G19420.1
AT4G19420
Pectinacetylesterase family protein
Chr4_+_17752079 1.01 AT4G37770.1
ACS8
1-amino-cyclopropane-1-carboxylate synthase 8
Chr2_+_9903215 1.01 AT2G23270.1
AT2G23270
transmembrane protein
Chr1_+_5602786 1.01 AT1G16390.1
OCT3
organic cation/carnitine transporter 3
Chr2_-_108803 1.00 AT2G01180.7
AT2G01180.2
AT2G01180.5
AT2G01180.1
AT2G01180.8
AT2G01180.4
AT2G01180.3
PAP1
phosphatidic acid phosphatase 1
Chr5_+_4488476 0.99 AT5G13930.1
TT4
Chalcone and stilbene synthase family protein
Chr5_-_21938396 0.98 AT5G54060.1
UF3GT
UDP-glucose:flavonoid 3-o-glucosyltransferase
Chr1_+_20525654 0.98 AT1G55020.1
LOX1
lipoxygenase 1
Chr3_+_6876043 0.97 AT3G19800.1
AT3G19800.2
AT3G19800
E3 ubiquitin-protein ligase, putative (DUF177)
Chr1_-_10308163 0.97 AT1G29460.1
AT1G29460.2
AT1G29460
SAUR-like auxin-responsive protein family
Chr5_-_8856758 0.96 AT5G25440.1
AT5G25440.2
AT5G25440
Protein kinase superfamily protein
Chr3_+_10255906 0.96 AT3G27690.2
AT3G27690.1
LHCB2.3
photosystem II light harvesting complex protein 2.3
Chr1_-_4633299 0.95 AT1G13520.1
AT1G13520
hypothetical protein (DUF1262)
Chr5_+_23003909 0.95 AT5G56870.1
BGAL4
beta-galactosidase 4
Chr3_+_8309209 0.95 AT3G23250.1
AT3G23250.2
MYB15
myb domain protein 15
Chr5_-_18954692 0.95 AT5G46710.1
AT5G46710.2
AT5G46710.3
AT5G46710
PLATZ transcription factor family protein
Chr4_-_18459257 0.94 AT4G39780.1
AT4G39780
Integrase-type DNA-binding superfamily protein
Chr3_+_9758797 0.94 AT3G26580.1
AT3G26580
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_-_1832190 0.93 AT3G06070.1
AT3G06070
hypothetical protein
Chr5_-_13903218 0.92 AT5G35735.1
AT5G35735
Auxin-responsive family protein
Chr5_+_5658416 0.92 AT5G17220.1
GSTF12
glutathione S-transferase phi 12
Chr1_+_7043628 0.91 AT1G20350.1
TIM17-1
translocase inner membrane subunit 17-1
Chr4_+_8010967 0.91 AT4G13830.2
AT4G13830.3
J20
DNAJ-like 20
Chr5_+_16151772 0.91 AT5G40380.3
AT5G40380.2
CRK42
cysteine-rich RLK (RECEPTOR-like protein kinase) 42
Chr3_+_3249513 0.90 AT3G10450.3
AT3G10450.2
AT3G10450.1
AT3G10450.4
SCPL7
serine carboxypeptidase-like 7
Chr4_+_14215473 0.90 AT4G28780.1
AT4G28780
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_5596633 0.90 AT1G16370.1
OCT6
organic cation/carnitine transporter 6
Chr3_-_18863397 0.90 AT3G50750.1
BEH1
BES1/BZR1 homolog 1
Chr3_-_20718866 0.90 AT3G55840.1
AT3G55840
Hs1pro-1 protein
Chr3_-_826585 0.89 AT3G03470.1
CYP89A9
cytochrome P450, family 87, subfamily A, polypeptide 9
Chr2_-_1355883 0.89 AT2G04070.1
AT2G04070
MATE efflux family protein
Chr3_+_17228642 0.89 AT3G46780.1
PTAC16
plastid transcriptionally active 16
Chr4_+_7480556 0.89 AT4G12690.2
AT4G12690.1
AT4G12690
DUF868 family protein (DUF868)
Chr2_+_17886101 0.89 AT2G43010.1
AT2G43010.3
AT2G43010.4
PIF4
phytochrome interacting factor 4
Chr2_+_7406911 0.89 AT2G17040.1
NAC036
NAC domain containing protein 36
Chr4_-_468294 0.89 AT4G01080.1
TBL26
TRICHOME BIREFRINGENCE-LIKE 26
Chr4_+_334573 0.88 AT4G00780.1
AT4G00780
TRAF-like family protein
Chr2_+_18253610 0.88 AT2G44130.1
AT2G44130
Galactose oxidase/kelch repeat superfamily protein
Chr1_-_10382153 0.88 AT1G29690.1
CAD1
MAC/Perforin domain-containing protein
Chr2_-_10975916 0.87 AT2G25735.1
AT2G25735
hypothetical protein
Chr4_+_8011183 0.87 AT4G13830.1
J20
DNAJ-like 20
Chr5_+_3193017 0.87 AT5G10180.1
SULTR2%3B1
slufate transporter 2;1
Chr1_+_23650840 0.86 AT1G63750.3
AT1G63750.2
AT1G63750.1
AT1G63750
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_-_10055881 0.86 AT1G28610.2
AT1G28610.1
AT1G28610
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_+_16688626 0.86 AT5G41740.1
AT5G41740.3
AT5G41740.2
AT5G41740
Disease resistance protein (TIR-NBS-LRR class) family
Chr5_-_24767732 0.86 AT5G61600.1
ERF104
ethylene response factor 104
Chr1_+_3288087 0.85 AT1G10070.3
AT1G10070.2
AT1G10070.1
BCAT-2
branched-chain amino acid transaminase 2
Chr4_+_7148124 0.85 AT4G11890.3
AT4G11890.1
AT4G11890.4
ARCK1
Protein kinase superfamily protein
Chr1_-_8310916 0.85 AT1G23390.1
AT1G23390
Kelch repeat-containing F-box family protein
Chr4_+_6967709 0.85 AT4G11470.2
AT4G11470.1
CRK31
cysteine-rich RLK (RECEPTOR-like protein kinase) 31
Chr3_-_11400332 0.85 AT3G29590.1
AT5MAT
HXXXD-type acyl-transferase family protein
Chr5_+_3545211 0.84 AT5G11140.1
AT5G11140
phospholipase-like protein (PEARLI 4) family protein
Chr4_-_10590700 0.84 AT4G19420.4
AT4G19420
Pectinacetylesterase family protein
Chr4_-_17139777 0.83 AT4G36220.1
FAH1
ferulic acid 5-hydroxylase 1
Chr4_+_16502747 0.83 AT4G34550.2
AT4G34550
F-box protein
Chr5_+_5718498 0.83 AT5G17350.1
AT5G17350
hypothetical protein
Chr3_+_11728024 0.83 AT3G29810.1
COBL2
COBRA-like protein 2 precursor
Chr4_+_4886962 0.83 AT4G08040.1
ACS11
1-aminocyclopropane-1-carboxylate synthase 11
Chr5_-_19172956 0.82 AT5G47220.1
ERF2
ethylene responsive element binding factor 2
Chr3_-_1763348 0.82 AT3G05900.2
AT3G05900
neurofilament protein-like protein
Chr5_-_16195751 0.82 AT5G40450.2
AT5G40450.1
AT5G40450
A-kinase anchor-like protein
Chr3_-_8890927 0.82 AT3G24460.1
AT3G24460
Serinc-domain containing serine and sphingolipid biosynthesis protein
Chr3_+_17520958 0.82 AT3G47540.1
AT3G47540.2
AT3G47540
Chitinase family protein
Chr1_+_25041833 0.81 AT1G67070.1
AT1G67070.2
DIN9
Mannose-6-phosphate isomerase, type I
Chr1_-_12984640 0.81 AT1G35350.2
AT1G35350.1
AT1G35350
EXS (ERD1/XPR1/SYG1) family protein
Chr4_-_18084630 0.81 AT4G38740.1
ROC1
rotamase CYP 1
Chr5_-_26899736 0.81 AT5G67411.1
AT5G67411
GRAS family transcription factor
Chr1_+_852151 0.81 AT1G03440.1
AT1G03440
Leucine-rich repeat (LRR) family protein
Chr5_-_17025361 0.81 AT5G42580.1
CYP705A12
cytochrome P450, family 705, subfamily A, polypeptide 12
Chr2_-_17882636 0.81 AT2G43000.1
AT2G43000.2
NAC042
NAC domain containing protein 42
Chr5_-_23873691 0.80 AT5G59130.1
AT5G59130.2
AT5G59130.3
AT5G59130.4
AT5G59130
Subtilase family protein
Chr5_+_14887429 0.80 AT5G37490.1
AT5G37490
ARM repeat superfamily protein
Chr5_+_2083964 0.80 AT5G06740.2
AT5G06740.1
AT5G06740
Concanavalin A-like lectin protein kinase family protein
Chr4_+_16502532 0.79 AT4G34550.1
AT4G34550
F-box protein
Chr5_-_21453980 0.79 AT5G52900.1
MAKR6
membrane-associated kinase regulator
Chr3_-_9634470 0.79 AT3G26290.1
CYP71B26
cytochrome P450, family 71, subfamily B, polypeptide 26
Chr3_+_18733021 0.79 AT3G50480.2
AT3G50480.1
HR4
homolog of RPW8 4
Chr3_-_9634822 0.79 AT3G26290.2
CYP71B26
cytochrome P450, family 71, subfamily B, polypeptide 26
Chr5_-_753657 0.78 AT5G03170.1
FLA11
FASCICLIN-like arabinogalactan-protein 11
Chr5_-_37999 0.78 AT5G01100.1
FRB1
O-fucosyltransferase family protein
Chr1_-_20160864 0.78 AT1G54010.1
AT1G54010
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_29135904 0.78 AT1G77530.1
AT1G77530.2
AT1G77530
O-methyltransferase family protein
Chr3_-_21931570 0.78 AT3G59340.1
AT3G59340.3
AT3G59340.4
AT3G59340
solute carrier family 35 protein (DUF914)
Chr1_+_20151016 0.78 AT1G53990.1
GLIP3
GDSL-motif lipase 3
Chr3_-_1763984 0.78 AT3G05900.1
AT3G05900
neurofilament protein-like protein
Chr1_+_28327698 0.78 AT1G75460.1
AT1G75460
ATP-dependent protease La (LON) domain protein
Chr5_+_5968352 0.77 AT5G18030.1
AT5G18030
SAUR-like auxin-responsive protein family
Chr4_-_437591 0.77 AT4G01010.1
AT4G01010.2
CNGC13
cyclic nucleotide-gated channel 13
Chr3_-_18611262 0.77 AT3G50190.2
AT3G50190.1
AT3G50190.3
AT3G50190.4
AT3G50190
transmembrane protein, putative (DUF247)
Chr1_+_28253890 0.77 AT1G75290.1
AT1G75290
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_5489145 0.77 AT1G15980.1
PnsB1
NDH-dependent cyclic electron flow 1
Chr2_+_10899348 0.77 AT2G25605.1
AT2G25605
DNA-directed RNA polymerase subunit beta
Chr2_+_17886798 0.77 AT2G43010.5
PIF4
phytochrome interacting factor 4
Chr2_+_6313883 0.76 AT2G14750.1
APK
APS kinase
Chr1_-_19458069 0.76 AT1G52240.1
ROPGEF11
rop guanine nucleotide exchange factor-like protein
Chr1_-_26770175 0.76 AT1G71000.1
AT1G71000.2
AT1G71000
Chaperone DnaJ-domain superfamily protein
Chr1_+_25464712 0.76 AT1G67900.4
AT1G67900.3
AT1G67900.5
AT1G67900
Phototropic-responsive NPH3 family protein
Chr2_+_17886427 0.76 AT2G43010.2
PIF4
phytochrome interacting factor 4
Chr2_-_9454270 0.76 AT2G22240.3
AT2G22240.1
MIPS2
myo-inositol-1-phosphate synthase 2

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G65910

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.9 GO:0060236 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.6 3.7 GO:0006567 threonine catabolic process(GO:0006567)
0.6 3.0 GO:0019310 inositol catabolic process(GO:0019310)
0.5 1.4 GO:0010045 response to nickel cation(GO:0010045)
0.5 1.4 GO:0006057 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
0.4 1.8 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.4 1.1 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.4 1.1 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.3 1.3 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.3 1.5 GO:0006690 icosanoid metabolic process(GO:0006690) fatty acid derivative metabolic process(GO:1901568)
0.3 1.5 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.3 0.9 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.3 0.9 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.3 1.5 GO:0015700 arsenite transport(GO:0015700) phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.3 0.9 GO:0042766 nucleosome mobilization(GO:0042766)
0.3 2.0 GO:0043066 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.3 1.6 GO:0009745 sucrose mediated signaling(GO:0009745)
0.3 2.8 GO:0070370 cellular heat acclimation(GO:0070370)
0.2 3.4 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.2 2.6 GO:0080086 stamen filament development(GO:0080086)
0.2 1.5 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.2 0.4 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.2 0.6 GO:0045905 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.2 0.2 GO:0042908 xenobiotic transport(GO:0042908)
0.2 0.6 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.2 1.0 GO:0016137 glycoside metabolic process(GO:0016137)
0.2 1.7 GO:0010230 alternative respiration(GO:0010230)
0.2 0.9 GO:0097036 regulation of plasma membrane sterol distribution(GO:0097036)
0.2 0.9 GO:0010226 response to lithium ion(GO:0010226)
0.2 0.7 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.2 0.9 GO:0006106 fumarate metabolic process(GO:0006106)
0.2 0.9 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.2 0.4 GO:0019367 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.2 0.5 GO:0010184 cytokinin transport(GO:0010184)
0.2 0.9 GO:1904589 regulation of protein import(GO:1904589)
0.2 0.3 GO:1990937 xylan acetylation(GO:1990937)
0.2 0.5 GO:0055089 fatty acid homeostasis(GO:0055089)
0.2 0.6 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.2 1.0 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.2 2.1 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.2 1.6 GO:0010196 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.2 0.8 GO:0042549 photosystem II stabilization(GO:0042549)
0.2 0.2 GO:0097468 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.2 2.9 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 1.2 GO:0044375 regulation of peroxisome size(GO:0044375)
0.1 0.7 GO:0006788 heme oxidation(GO:0006788)
0.1 1.6 GO:0051865 protein autoubiquitination(GO:0051865)
0.1 2.3 GO:0015976 carbon utilization(GO:0015976)
0.1 2.7 GO:1901071 glucosamine-containing compound metabolic process(GO:1901071)
0.1 0.1 GO:2000068 regulation of defense response to insect(GO:2000068)
0.1 0.4 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.1 0.9 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 3.5 GO:0009612 response to mechanical stimulus(GO:0009612)
0.1 0.6 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
0.1 0.6 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 0.8 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.1 0.5 GO:0099636 cytoplasmic streaming(GO:0099636)
0.1 1.5 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 0.9 GO:0009099 valine biosynthetic process(GO:0009099)
0.1 0.5 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 1.2 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.1 0.5 GO:0036065 fucosylation(GO:0036065)
0.1 0.6 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 1.4 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.1 0.3 GO:0009945 radial axis specification(GO:0009945)
0.1 0.3 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.1 0.3 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.1 1.4 GO:0030497 fatty acid elongation(GO:0030497)
0.1 0.3 GO:0032490 detection of molecule of bacterial origin(GO:0032490)
0.1 0.3 GO:0010055 atrichoblast differentiation(GO:0010055)
0.1 0.3 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.1 1.5 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.1 1.0 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.1 0.3 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.1 0.7 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 0.3 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.1 0.3 GO:0036292 DNA rewinding(GO:0036292)
0.1 0.2 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.1 0.3 GO:0002215 defense response to nematode(GO:0002215)
0.1 0.4 GO:0015669 gas transport(GO:0015669)
0.1 0.3 GO:0072388 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.1 0.6 GO:0043617 cellular response to sucrose starvation(GO:0043617)
0.1 0.8 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.1 0.8 GO:0009799 specification of symmetry(GO:0009799)
0.1 0.8 GO:0006561 proline biosynthetic process(GO:0006561)
0.1 0.9 GO:0000304 response to singlet oxygen(GO:0000304)
0.1 0.4 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.1 0.3 GO:0070509 calcium ion import(GO:0070509)
0.1 1.0 GO:0030307 positive regulation of cell growth(GO:0030307)
0.1 1.1 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.1 0.2 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.1 0.6 GO:0009435 NAD biosynthetic process(GO:0009435)
0.1 0.4 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.1 0.7 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 0.3 GO:0001578 microtubule bundle formation(GO:0001578)
0.1 1.0 GO:0009704 de-etiolation(GO:0009704)
0.1 10.0 GO:0010200 response to chitin(GO:0010200)
0.1 0.8 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.1 0.7 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.1 0.3 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.1 0.3 GO:1901336 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.1 1.0 GO:0048645 organ formation(GO:0048645)
0.1 0.9 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.1 0.4 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.1 0.2 GO:0072526 pyridoxal metabolic process(GO:0042817) pyridine-containing compound catabolic process(GO:0072526)
0.1 0.5 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.1 0.5 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.1 0.3 GO:0035308 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.1 1.3 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.1 0.3 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.1 0.3 GO:0034329 cell-cell junction assembly(GO:0007043) cell junction assembly(GO:0034329)
0.1 0.7 GO:0015749 monosaccharide transport(GO:0015749)
0.1 0.8 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 0.5 GO:1901465 positive regulation of tetrapyrrole biosynthetic process(GO:1901465)
0.1 0.4 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.1 0.9 GO:0031408 oxylipin metabolic process(GO:0031407) oxylipin biosynthetic process(GO:0031408)
0.1 0.2 GO:0046949 fatty-acyl-CoA biosynthetic process(GO:0046949)
0.1 0.2 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.1 1.5 GO:0006817 phosphate ion transport(GO:0006817)
0.1 1.3 GO:0010214 seed coat development(GO:0010214)
0.1 1.3 GO:0045493 xylan catabolic process(GO:0045493)
0.1 1.2 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 0.2 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.1 0.5 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 0.3 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.1 0.6 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 0.8 GO:0007050 cell cycle arrest(GO:0007050)
0.1 0.4 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 0.4 GO:0009645 response to low light intensity stimulus(GO:0009645)
0.1 0.3 GO:0042391 regulation of membrane potential(GO:0042391)
0.1 0.3 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.4 GO:0031936 negative regulation of chromatin silencing(GO:0031936)
0.1 1.1 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.1 0.2 GO:0019343 cysteine biosynthetic process via cystathionine(GO:0019343) protein homotetramerization(GO:0051289)
0.1 0.2 GO:2000082 regulation of vitamin metabolic process(GO:0030656) regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.1 0.3 GO:0015824 proline transport(GO:0015824)
0.1 0.6 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.0 0.1 GO:0071569 protein ufmylation(GO:0071569)
0.0 0.6 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.4 GO:1902025 nitrate import(GO:1902025)
0.0 0.3 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.0 0.2 GO:0071836 nectar secretion(GO:0071836)
0.0 0.2 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.0 0.1 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.0 0.1 GO:0080051 cutin transport(GO:0080051)
0.0 0.4 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.0 0.4 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.0 2.3 GO:0051510 regulation of unidimensional cell growth(GO:0051510)
0.0 0.5 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 3.0 GO:0009875 pollen-pistil interaction(GO:0009875)
0.0 0.4 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.3 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.0 0.3 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.2 GO:0016115 isoprenoid catabolic process(GO:0008300) sesquiterpenoid catabolic process(GO:0016107) terpenoid catabolic process(GO:0016115) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.0 2.2 GO:0006906 vesicle fusion(GO:0006906)
0.0 0.4 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 1.6 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 4.3 GO:0009860 pollen tube growth(GO:0009860)
0.0 0.2 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.0 0.8 GO:0005983 starch catabolic process(GO:0005983)
0.0 0.2 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.0 0.0 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.0 0.2 GO:0000187 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.0 0.6 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.2 GO:1902767 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.0 0.8 GO:0050826 response to freezing(GO:0050826)
0.0 1.3 GO:0051607 defense response to virus(GO:0051607)
0.0 0.3 GO:0009610 response to symbiotic fungus(GO:0009610)
0.0 0.6 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.0 0.0 GO:0043954 cellular component maintenance(GO:0043954) chromatin maintenance(GO:0070827) heterochromatin maintenance(GO:0070829)
0.0 1.5 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.0 0.3 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.0 1.2 GO:1901800 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.0 0.2 GO:0006103 2-oxoglutarate metabolic process(GO:0006103) aspartate metabolic process(GO:0006531)
0.0 0.4 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.5 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.2 GO:0042659 regulation of cell fate specification(GO:0042659)
0.0 0.4 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.0 1.9 GO:0009627 systemic acquired resistance(GO:0009627)
0.0 0.1 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.0 0.3 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.0 0.4 GO:0008216 spermidine metabolic process(GO:0008216)
0.0 0.8 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.0 1.0 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.1 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.0 0.3 GO:0010358 leaf shaping(GO:0010358)
0.0 0.1 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 0.5 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.2 GO:1901656 glycoside transport(GO:1901656)
0.0 0.1 GO:2000692 negative regulation of seed maturation(GO:2000692)
0.0 0.1 GO:0010455 positive regulation of cell fate commitment(GO:0010455)
0.0 0.9 GO:0030422 production of siRNA involved in RNA interference(GO:0030422)
0.0 0.1 GO:0030856 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.0 0.6 GO:0042631 cellular response to water deprivation(GO:0042631)
0.0 0.3 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.3 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.1 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.0 0.6 GO:0030091 protein repair(GO:0030091)
0.0 0.1 GO:0008333 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.0 0.1 GO:0080088 spermidine hydroxycinnamate conjugate biosynthetic process(GO:0080088)
0.0 0.5 GO:0010440 stomatal lineage progression(GO:0010440)
0.0 0.4 GO:0080027 response to herbivore(GO:0080027)
0.0 0.4 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.6 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.1 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.0 0.2 GO:0010165 response to X-ray(GO:0010165)
0.0 0.1 GO:0017145 stem cell division(GO:0017145)
0.0 0.4 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.0 0.4 GO:0019471 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.7 GO:1900673 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.5 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 0.4 GO:0015766 disaccharide transport(GO:0015766) sucrose transport(GO:0015770) oligosaccharide transport(GO:0015772)
0.0 0.5 GO:0060688 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.1 GO:0009957 epidermal cell fate specification(GO:0009957)
0.0 4.7 GO:0071456 cellular response to hypoxia(GO:0071456)
0.0 0.5 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.0 0.1 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.0 0.4 GO:0042147 retrograde transport, endosome to Golgi(GO:0042147)
0.0 0.4 GO:0031056 regulation of histone modification(GO:0031056)
0.0 0.6 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.4 GO:0046855 phosphorylated carbohydrate dephosphorylation(GO:0046838) inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.0 0.8 GO:1901421 positive regulation of abscisic acid-activated signaling pathway(GO:0009789) positive regulation of response to alcohol(GO:1901421)
0.0 1.1 GO:0018393 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.0 0.7 GO:0010584 pollen exine formation(GO:0010584)
0.0 0.1 GO:0019427 acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.0 1.0 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.1 GO:0043903 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of viral process(GO:0050792)
0.0 0.3 GO:0010229 inflorescence development(GO:0010229)
0.0 0.1 GO:0044236 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.0 0.1 GO:0060866 leaf abscission(GO:0060866)
0.0 0.1 GO:0043409 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
0.0 0.1 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.0 1.8 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.1 GO:0033967 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.0 0.6 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.2 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.1 GO:0050667 transsulfuration(GO:0019346) homocysteine metabolic process(GO:0050667)
0.0 0.1 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.0 0.6 GO:0046246 terpene biosynthetic process(GO:0046246)
0.0 0.2 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.0 0.6 GO:0009863 salicylic acid mediated signaling pathway(GO:0009863)
0.0 0.2 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 0.3 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.1 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.2 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.0 0.1 GO:0009268 response to pH(GO:0009268)
0.0 0.3 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.0 0.3 GO:0010216 maintenance of DNA methylation(GO:0010216)
0.0 0.1 GO:0071457 cellular response to ozone(GO:0071457)
0.0 0.2 GO:0042753 entrainment of circadian clock(GO:0009649) positive regulation of circadian rhythm(GO:0042753)
0.0 0.5 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 0.2 GO:1902532 negative regulation of intracellular signal transduction(GO:1902532)
0.0 0.7 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.4 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 1.2 GO:0000209 protein polyubiquitination(GO:0000209)
0.0 0.2 GO:0015691 cadmium ion transport(GO:0015691)
0.0 0.9 GO:0009787 regulation of abscisic acid-activated signaling pathway(GO:0009787)
0.0 0.2 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 0.1 GO:0016094 polyprenol biosynthetic process(GO:0016094)
0.0 0.6 GO:0043269 regulation of ion transport(GO:0043269)
0.0 0.3 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.1 GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290)
0.0 0.1 GO:2000014 regulation of endosperm development(GO:2000014)
0.0 0.1 GO:0080117 secondary growth(GO:0080117)
0.0 0.1 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.6 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.2 GO:0030026 cellular manganese ion homeostasis(GO:0030026)
0.0 0.1 GO:0019320 hexose catabolic process(GO:0019320)
0.0 0.0 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.0 0.8 GO:0006897 endocytosis(GO:0006897)
0.0 0.4 GO:0009903 chloroplast avoidance movement(GO:0009903)
0.0 0.3 GO:0006298 mismatch repair(GO:0006298)
0.0 0.1 GO:0006308 DNA catabolic process(GO:0006308)
0.0 0.0 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.0 0.2 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.1 GO:0019632 shikimate metabolic process(GO:0019632)
0.0 0.1 GO:0046464 diacylglycerol metabolic process(GO:0046339) neutral lipid catabolic process(GO:0046461) acylglycerol catabolic process(GO:0046464)
0.0 0.3 GO:0009960 endosperm development(GO:0009960)
0.0 0.2 GO:0046654 tetrahydrofolate biosynthetic process(GO:0046654)
0.0 0.1 GO:0045851 pH reduction(GO:0045851)
0.0 0.1 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155) negative regulation of photosynthesis(GO:1905156)
0.0 0.8 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.0 GO:0000256 allantoin catabolic process(GO:0000256)
0.0 0.4 GO:0009142 nucleoside triphosphate biosynthetic process(GO:0009142)
0.0 0.2 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.7 GO:0022900 electron transport chain(GO:0022900)
0.0 0.1 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.2 GO:0046460 triglyceride biosynthetic process(GO:0019432) neutral lipid biosynthetic process(GO:0046460) acylglycerol biosynthetic process(GO:0046463)
0.0 0.3 GO:0016101 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686) diterpenoid metabolic process(GO:0016101) diterpenoid biosynthetic process(GO:0016102)
0.0 0.2 GO:0019915 lipid storage(GO:0019915)
0.0 0.5 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.0 0.2 GO:0048598 embryonic morphogenesis(GO:0048598)
0.0 1.3 GO:0006310 DNA recombination(GO:0006310)
0.0 2.0 GO:0042742 defense response to bacterium(GO:0042742)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.9 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.4 1.3 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.2 2.2 GO:0009517 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.2 0.7 GO:0043668 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.2 1.4 GO:0009538 photosystem I reaction center(GO:0009538)
0.1 2.1 GO:0005880 nuclear microtubule(GO:0005880)
0.1 1.6 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 1.0 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.1 0.9 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 1.2 GO:0010168 ER body(GO:0010168)
0.1 0.7 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.1 0.6 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.3 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.1 1.1 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.1 0.3 GO:0033281 TAT protein transport complex(GO:0033281)
0.1 0.3 GO:0030093 chloroplast photosystem I(GO:0030093)
0.1 0.8 GO:0005784 Sec61 translocon complex(GO:0005784)
0.1 0.5 GO:0000796 condensin complex(GO:0000796)
0.1 1.3 GO:0005801 cis-Golgi network(GO:0005801)
0.1 0.9 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.1 0.4 GO:0000938 GARP complex(GO:0000938)
0.1 0.8 GO:0048226 Casparian strip(GO:0048226)
0.1 0.3 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.1 1.8 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.1 1.2 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.1 0.3 GO:0009509 chromoplast(GO:0009509)
0.1 1.5 GO:0016324 apical plasma membrane(GO:0016324)
0.1 0.9 GO:0033202 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.1 0.2 GO:0032044 DSIF complex(GO:0032044)
0.1 0.6 GO:0090576 transcription factor TFIIIC complex(GO:0000127) RNA polymerase III transcription factor complex(GO:0090576)
0.1 0.3 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 0.9 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.1 0.8 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.1 0.9 GO:0045239 tricarboxylic acid cycle enzyme complex(GO:0045239)
0.1 1.9 GO:0000137 Golgi cis cisterna(GO:0000137)
0.1 0.2 GO:0070505 pollen coat(GO:0070505)
0.1 0.4 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 0.3 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.2 GO:0032807 DNA ligase IV complex(GO:0032807)
0.0 0.4 GO:0098553 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.0 0.6 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.3 GO:0032153 cell division site(GO:0032153)
0.0 0.6 GO:0045298 tubulin complex(GO:0045298)
0.0 0.5 GO:0043230 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 2.1 GO:0005811 lipid particle(GO:0005811)
0.0 0.6 GO:0030125 clathrin vesicle coat(GO:0030125)
0.0 0.5 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.0 5.6 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.6 GO:0009986 cell surface(GO:0009986)
0.0 0.2 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.1 GO:0009523 photosystem II(GO:0009523)
0.0 1.7 GO:0031201 SNARE complex(GO:0031201)
0.0 0.4 GO:0051286 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 1.2 GO:0010319 stromule(GO:0010319)
0.0 0.0 GO:0005905 clathrin-coated pit(GO:0005905)
0.0 0.3 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 1.1 GO:0010287 plastoglobule(GO:0010287)
0.0 0.3 GO:0016459 myosin complex(GO:0016459)
0.0 5.3 GO:0048046 apoplast(GO:0048046)
0.0 0.1 GO:0005960 glycine cleavage complex(GO:0005960)
0.0 5.8 GO:0042579 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.4 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.1 GO:0005771 multivesicular body(GO:0005771)
0.0 0.1 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.3 GO:0070069 cytochrome complex(GO:0070069)
0.0 0.8 GO:0005741 mitochondrial outer membrane(GO:0005741)
0.0 0.1 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.0 0.2 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.3 GO:0000145 exocyst(GO:0000145)
0.0 0.2 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.0 0.3 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.5 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.2 GO:0009508 plastid chromosome(GO:0009508)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 3.7 GO:0008732 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.7 2.1 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.6 3.0 GO:0050113 inositol oxygenase activity(GO:0050113)
0.6 0.6 GO:0003994 aconitate hydratase activity(GO:0003994)
0.5 2.1 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.5 1.4 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.4 1.3 GO:0051738 xanthophyll binding(GO:0051738)
0.4 1.3 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.3 1.0 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.3 0.9 GO:0035671 enone reductase activity(GO:0035671)
0.3 0.9 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.3 1.2 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.3 1.5 GO:0046870 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) cadmium ion binding(GO:0046870)
0.3 0.9 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.3 0.8 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.3 1.3 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.3 0.8 GO:0010242 oxygen evolving activity(GO:0010242)
0.3 0.8 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.2 1.2 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.2 1.9 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.2 0.9 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
0.2 1.7 GO:0009916 alternative oxidase activity(GO:0009916)
0.2 0.6 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.2 1.5 GO:0019825 oxygen binding(GO:0019825)
0.2 2.0 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.2 0.6 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.2 0.6 GO:0000309 nicotinamide-nucleotide adenylyltransferase activity(GO:0000309)
0.2 0.9 GO:0004333 fumarate hydratase activity(GO:0004333)
0.2 0.5 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.2 2.1 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.2 1.8 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.2 0.5 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.2 0.5 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.2 0.5 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.1 0.7 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.1 1.1 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.1 0.4 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.1 1.6 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.1 0.7 GO:0002020 protease binding(GO:0002020)
0.1 0.3 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.4 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.1 1.4 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.1 1.4 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.1 0.8 GO:0004126 cytidine deaminase activity(GO:0004126)
0.1 1.4 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.1 0.2 GO:0030619 U1 snRNA binding(GO:0030619)
0.1 0.4 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.1 0.4 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.1 1.8 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.1 0.4 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.1 1.4 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 0.9 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.1 0.9 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 0.5 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.1 1.0 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.1 0.4 GO:0070405 ammonium ion binding(GO:0070405)
0.1 2.2 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.1 0.5 GO:0004127 cytidylate kinase activity(GO:0004127)
0.1 1.0 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 0.5 GO:0008430 selenium binding(GO:0008430)
0.1 0.4 GO:0004385 guanylate kinase activity(GO:0004385)
0.1 0.9 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 0.3 GO:0000992 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 3 promoter sequence-specific DNA binding(GO:0001006) RNA polymerase III regulatory region DNA binding(GO:0001016) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.1 0.3 GO:0015180 L-alanine transmembrane transporter activity(GO:0015180) gamma-aminobutyric acid transmembrane transporter activity(GO:0015185) alanine transmembrane transporter activity(GO:0022858)
0.1 0.5 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113) L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.1 1.3 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 0.9 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.1 2.3 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.7 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.3 GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.1 2.2 GO:0004568 chitinase activity(GO:0004568)
0.1 1.5 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 2.2 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 0.5 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 0.3 GO:0047517 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.1 0.5 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.3 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.1 3.5 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 0.6 GO:0030332 cyclin binding(GO:0030332)
0.1 0.8 GO:0004806 triglyceride lipase activity(GO:0004806)
0.1 0.2 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.1 2.1 GO:0051787 misfolded protein binding(GO:0051787)
0.1 0.4 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.1 0.8 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.3 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.1 0.2 GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity(GO:0008534)
0.1 0.4 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 0.9 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.4 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.1 0.6 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.1 2.3 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.1 0.6 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 0.8 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.1 0.3 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.1 2.1 GO:0005179 hormone activity(GO:0005179)
0.1 1.3 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.1 0.2 GO:0032131 alkylated DNA binding(GO:0032131)
0.1 1.0 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 0.4 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.1 0.2 GO:0008061 chitin binding(GO:0008061)
0.1 0.4 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.1 0.1 GO:0004484 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192) polynucleotide phosphatase activity(GO:0098518)
0.1 0.6 GO:0031078 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 0.6 GO:0016161 beta-amylase activity(GO:0016161)
0.1 0.5 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 2.0 GO:0051119 sugar transmembrane transporter activity(GO:0051119)
0.1 1.0 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.1 0.3 GO:0008417 fucosyltransferase activity(GO:0008417)
0.1 0.2 GO:0070402 NADPH binding(GO:0070402)
0.1 0.4 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.1 0.3 GO:0034511 U3 snoRNA binding(GO:0034511)
0.1 1.2 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 0.2 GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.1 0.5 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 0.3 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.1 2.1 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 0.5 GO:0043495 protein anchor(GO:0043495)
0.0 0.3 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.2 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.0 0.2 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.0 1.2 GO:0043138 3'-5' DNA helicase activity(GO:0043138)
0.0 0.2 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.0 0.4 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.0 0.2 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.0 0.1 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.0 0.3 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 0.4 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 1.3 GO:0008266 poly(U) RNA binding(GO:0008266)
0.0 0.8 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 2.0 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.4 GO:0017070 U6 snRNA binding(GO:0017070)
0.0 2.3 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.2 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.7 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.2 GO:0052658 inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658)
0.0 0.3 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.2 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 0.8 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 1.2 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 0.6 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.4 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.5 GO:0004499 N,N-dimethylaniline monooxygenase activity(GO:0004499)
0.0 1.0 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.1 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.3 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.3 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.4 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.1 GO:0019789 SUMO transferase activity(GO:0019789)
0.0 1.8 GO:0022884 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.0 0.6 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.1 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.0 0.2 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.0 0.4 GO:0015038 peptide disulfide oxidoreductase activity(GO:0015037) glutathione disulfide oxidoreductase activity(GO:0015038)
0.0 0.4 GO:0004575 sucrose alpha-glucosidase activity(GO:0004575)
0.0 0.2 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.0 0.5 GO:0070628 proteasome binding(GO:0070628)
0.0 0.6 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.1 GO:0070704 sterol desaturase activity(GO:0070704)
0.0 1.0 GO:0005262 calcium channel activity(GO:0005262)
0.0 0.2 GO:0019210 kinase inhibitor activity(GO:0019210)
0.0 0.4 GO:0031543 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline dioxygenase activity(GO:0031543) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0 0.5 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 1.5 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631) ubiquitin-like protein conjugating enzyme activity(GO:0061650)
0.0 0.6 GO:0030276 clathrin binding(GO:0030276)
0.0 0.6 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.1 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)
0.0 0.3 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.0 0.6 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 1.4 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.4 GO:0048029 monosaccharide binding(GO:0048029)
0.0 0.2 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.0 0.6 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.0 0.2 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.0 0.1 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.0 0.3 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.9 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.5 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 1.6 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.1 GO:0036374 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.0 0.4 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 0.4 GO:0004033 aldo-keto reductase (NADP) activity(GO:0004033) alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.0 0.1 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.0 0.2 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.1 GO:0036009 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.0 0.2 GO:0015198 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.0 0.3 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.2 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 2.3 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 2.3 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 0.2 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 0.1 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.0 0.2 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.5 GO:0010333 terpene synthase activity(GO:0010333)
0.0 0.7 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.7 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 0.1 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.1 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.1 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.0 0.2 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.7 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.2 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.0 0.1 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.0 0.1 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.0 0.1 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 0.4 GO:0008810 cellulase activity(GO:0008810)
0.0 2.6 GO:0043531 ADP binding(GO:0043531)
0.0 0.1 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.0 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.0 0.6 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.0 GO:0051723 prenylcysteine methylesterase activity(GO:0010296) protein methylesterase activity(GO:0051723)
0.0 0.2 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.0 GO:0016160 amylase activity(GO:0016160)
0.0 0.4 GO:0010181 FMN binding(GO:0010181)
0.0 0.1 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.0 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.0 0.0 GO:0016882 cyclo-ligase activity(GO:0016882)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.9 PID AURORA A PATHWAY Aurora A signaling
0.1 0.5 PID MYC PATHWAY C-MYC pathway
0.1 0.6 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.1 0.2 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.1 0.3 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.0 0.1 PID ARF 3PATHWAY Arf1 pathway
0.0 0.1 PID IL12 2PATHWAY IL12-mediated signaling events
0.0 0.1 PID REG GR PATHWAY Glucocorticoid receptor regulatory network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.1 0.4 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.1 0.3 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.1 0.3 REACTOME PKB MEDIATED EVENTS Genes involved in PKB-mediated events
0.1 0.5 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.4 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.1 0.3 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.1 0.2 REACTOME NUCLEOTIDE BINDING DOMAIN LEUCINE RICH REPEAT CONTAINING RECEPTOR NLR SIGNALING PATHWAYS Genes involved in Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways
0.1 0.3 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.0 0.2 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation