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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G61730

Z-value: 0.34

Transcription factors associated with AT1G61730

Gene Symbol Gene ID Gene Info
AT1G61730 DNA-binding storekeeper protein-related transcriptional regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT1G61730arTal_v1_Chr1_-_22794714_227947140.421.3e-01Click!

Activity profile of AT1G61730 motif

Sorted Z-values of AT1G61730 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_13283526 0.42 AT4G26220.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_5741500 0.37 AT5G17420.1
Cellulose synthase family protein
Chr2_-_17060652 0.27 AT2G40890.1
cytochrome P450, family 98, subfamily A, polypeptide 3
Chr5_+_5084524 0.25 AT5G15630.1
AT5G15630.2
AT5G15630.3
AT5G15630.4
AT5G15630.5
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Chr4_-_16063070 0.22 AT4G33330.2
AT4G33330.1
AT4G33330.5
AT4G33330.3
AT4G33330.4
plant glycogenin-like starch initiation protein 3
Chr2_-_12996012 0.22 AT2G30490.1
cinnamate-4-hydroxylase
Chr5_+_17714390 0.17 AT5G44030.2
AT5G44030.1
cellulose synthase A4
Chr1_+_4374205 0.17 AT1G12840.1
vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3)
Chr1_-_19161552 0.15 AT1G51680.3
AT1G51680.2
4-coumarate:CoA ligase 1
Chr1_-_19161737 0.14 AT1G51680.1
4-coumarate:CoA ligase 1
Chr1_-_9531489 0.14 AT1G27440.1
Exostosin family protein
Chr1_+_23337167 0.13 AT1G62990.1
homeobox knotted-like protein
Chr1_+_3111694 0.12 AT1G09610.1
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Chr3_-_6421983 0.12 AT3G18660.1
AT3G18660.3
AT3G18660.2
plant glycogenin-like starch initiation protein 1
Chr1_+_17634697 0.11 AT1G47870.1
AT1G47870.2
winged-helix DNA-binding transcription factor family protein
Chr3_-_2578276 0.08 AT3G08500.1
myb domain protein 83
Chr5_+_17715687 0.08 AT5G44030.3
cellulose synthase A4
Chr5_+_24396981 0.02 AT5G60690.1
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Chr1_+_5478603 0.01 AT1G15950.1
cinnamoyl coa reductase 1
Chr1_+_5479287 0.01 AT1G15950.7
cinnamoyl coa reductase 1
Chr1_+_5478754 0.00 AT1G15950.6
AT1G15950.5
AT1G15950.4
AT1G15950.3
AT1G15950.2
cinnamoyl coa reductase 1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G61730

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.4 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.0 0.5 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.1 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.0 0.2 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0010330 cellulose synthase complex(GO:0010330)
0.0 0.2 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.3 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.0 0.3 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.6 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)