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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G49560

Z-value: 3.15

Transcription factors associated with AT1G49560

Gene Symbol Gene ID Gene Info
AT1G49560
AT1G49560 Homeodomain-like superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT1G49560arTal_v1_Chr1_+_18342451_183424660.761.7e-03Click!

Activity profile of AT1G49560 motif

Sorted Z-values of AT1G49560 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_-_10289666 4.17 AT1G29395.1
COR413IM1
COLD REGULATED 314 INNER MEMBRANE 1
Chr5_+_20151163 4.10 AT5G49640.1
AT5G49640
hypothetical protein
Chr3_-_2699257 4.00 AT3G08860.2
PYD4
PYRIMIDINE 4
Chr2_+_19245591 3.97 AT2G46830.1
AT2G46830.2
CCA1
circadian clock associated 1
Chr1_+_28975255 3.91 AT1G77120.1
ADH1
alcohol dehydrogenase 1
Chr3_-_2699420 3.91 AT3G08860.1
PYD4
PYRIMIDINE 4
Chr2_-_19370478 3.84 AT2G47180.1
GolS1
galactinol synthase 1
Chr2_+_19246681 3.70 AT2G46830.3
CCA1
circadian clock associated 1
Chr1_+_3019639 3.33 AT1G09350.1
GolS3
galactinol synthase 3
Chr2_-_16603059 3.21 AT2G39800.2
AT2G39800.4
AT2G39800.3
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
Chr1_-_23246949 3.19 AT1G62770.1
AT1G62770
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_-_5177897 3.13 AT5G15850.1
COL1
CONSTANS-like 1
Chr2_+_16216752 3.11 AT2G38800.1
AT2G38800
Plant calmodulin-binding protein-like protein
Chr1_+_3020221 3.00 AT1G09350.2
GolS3
galactinol synthase 3
Chr1_+_19685747 3.00 AT1G52870.1
AT1G52870
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Chr1_+_19685545 2.98 AT1G52870.2
AT1G52870
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Chr5_+_5206156 2.92 AT5G15950.2
AT5G15950
Adenosylmethionine decarboxylase family protein
Chr5_+_5205869 2.85 AT5G15950.1
AT5G15950
Adenosylmethionine decarboxylase family protein
Chr4_-_2429899 2.80 AT4G04770.1
ABCI8
ATP binding cassette protein 1
Chr4_+_2189515 2.79 AT4G04410.1
AT4G04410

Chr3_-_17475274 2.77 AT3G47420.3
AT3G47420.1
AT3G47420.2
G3Pp1
putative glycerol-3-phosphate transporter 1
Chr4_-_18472048 2.76 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
Chr1_-_37757 2.73 AT1G01060.3
AT1G01060.2
AT1G01060.4
AT1G01060.1
AT1G01060.6
AT1G01060.7
AT1G01060.5
LHY
Homeodomain-like superfamily protein
Chr4_+_10707344 2.72 AT4G19690.2
AT4G19690.1
IRT1
iron-regulated transporter 1
Chr2_-_17202848 2.71 AT2G41250.1
AT2G41250
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_+_15878698 2.70 AT5G39660.1
AT5G39660.3
AT5G39660.2
CDF2
cycling DOF factor 2
Chr2_+_18346306 2.67 AT2G44460.1
BGLU28
beta glucosidase 28
Chr2_-_16603319 2.64 AT2G39800.1
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
Chr2_+_18347765 2.64 AT2G44460.2
BGLU28
beta glucosidase 28
Chr3_+_7959753 2.63 AT3G22440.1
AT3G22440
FRIGIDA-like protein
Chr3_-_9640918 2.56 AT3G26300.1
CYP71B34
cytochrome P450, family 71, subfamily B, polypeptide 34
Chr1_-_1337849 2.56 AT1G04770.1
AT1G04770
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_-_18811085 2.48 AT2G45660.2
AT2G45660.1
AGL20
AGAMOUS-like 20
Chr3_+_16818347 2.47 AT3G45780.2
PHOT1
phototropin 1
Chr2_+_13381767 2.47 AT2G31380.1
STH
salt tolerance homologue
Chr1_-_24595544 2.45 AT1G66060.1
AT1G66060
hypothetical protein (DUF577)
Chr4_+_17646408 2.43 AT4G37560.1
AT4G37560.2
AT4G37560
Acetamidase/Formamidase family protein
Chr3_-_4762457 2.42 AT3G14280.1
AT3G14280
LL-diaminopimelate aminotransferase
Chr3_-_23195917 2.41 AT3G62700.1
ABCC14
multidrug resistance-associated protein 10
Chr3_+_16816721 2.41 AT3G45780.1
PHOT1
phototropin 1
Chr2_-_19165233 2.40 AT2G46670.1
AT2G46670
CCT motif family protein
Chr5_+_9261479 2.40 AT5G26570.1
AT5G26570.2
PWD
chloroplastidic phosphoglucan, water dikinase (ATGWD3)
Chr1_+_25999837 2.38 AT1G69160.1
AT1G69160
suppressor
Chr3_-_20629295 2.35 AT3G55610.1
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
Chr3_-_16074929 2.30 AT3G44450.1
AT3G44450
hypothetical protein
Chr1_-_3518035 2.28 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
Chr4_-_9935685 2.26 AT4G17880.1
MYC4
Basic helix-loop-helix (bHLH) DNA-binding family protein
Chr3_-_20629093 2.25 AT3G55610.2
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
Chr1_-_26163715 2.23 AT1G69570.1
AT1G69570
Dof-type zinc finger DNA-binding family protein
Chr1_-_24865848 2.22 AT1G66670.1
CLPP3
CLP protease proteolytic subunit 3
Chr3_+_5243432 2.21 AT3G15510.1
NAC2
NAC domain containing protein 2
Chr1_+_29759030 2.21 AT1G79110.2
AT1G79110.3
AT1G79110.1
BRG2
zinc ion binding protein
Chr1_-_29716255 2.21 AT1G78995.1
AT1G78995
hypothetical protein
Chr4_+_11306945 2.20 AT4G21210.2
AT4G21210.1
RP1
PPDK regulatory protein
Chr5_-_8160343 2.18 AT5G24120.2
AT5G24120.1
SIGE
sigma factor E
Chr2_-_17379059 2.18 AT2G41680.1
NTRC
NADPH-dependent thioredoxin reductase C
Chr5_+_2866222 2.16 AT5G09220.1
AAP2
amino acid permease 2
Chr1_-_26434538 2.15 AT1G70200.1
AT1G70200
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_-_28194068 2.14 AT1G75100.1
JAC1
J-domain protein required for chloroplast accumulation response 1
Chr5_-_773295 2.12 AT5G03240.2
UBQ3
polyubiquitin 3
Chr3_-_5181537 2.12 AT3G15353.1
AT3G15353.2
MT3
metallothionein 3
Chr5_-_24083528 2.11 AT5G59780.2
AT5G59780.1
AT5G59780.3
MYB59
myb domain protein 59
Chr5_-_773513 2.10 AT5G03240.1
AT5G03240.3
UBQ3
polyubiquitin 3
Chr4_+_14569665 2.09 AT4G29750.1
AT4G29750.2
AT4G29750
CRS1 / YhbY (CRM) domain-containing protein
Chr2_+_9248525 2.08 AT2G21620.1
AT2G21620.2
RD2
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr3_-_7463525 2.08 AT3G21250.1
AT3G21250.6
AT3G21250.5
AT3G21250.3
AT3G21250.2
AT3G21250.4
ABCC8
multidrug resistance-associated protein 6
Chr3_-_17401871 2.07 AT3G47250.3
AT3G47250.2
AT3G47250
transmembrane protein, putative (DUF247)
Chr3_-_17537546 2.06 AT3G47590.2
AT3G47590.1
AT3G47590
alpha/beta-Hydrolases superfamily protein
Chr5_+_23940745 2.06 AT5G59350.1
AT5G59350.2
AT5G59350.3
AT5G59350
transmembrane protein
Chr1_+_7823066 2.06 AT1G22160.1
AT1G22160
senescence-associated family protein (DUF581)
Chr3_+_3923969 2.05 AT3G12320.3
AT3G12320
hypothetical protein
Chr3_+_5705541 2.03 AT3G16770.1
EBP
ethylene-responsive element binding protein
Chr4_-_7553332 2.03 AT4G12910.2
AT4G12910.1
scpl20
serine carboxypeptidase-like 20
Chr1_-_12745748 2.00 AT1G34760.1
AT1G34760.2
GRF11
general regulatory factor 11
Chr5_+_5995479 2.00 AT5G18130.2
AT5G18130
transmembrane protein
Chr5_+_26688943 1.99 AT5G66820.1
AT5G66820
transmembrane protein
Chr4_-_17197247 1.99 AT4G36390.1
AT4G36390
Methylthiotransferase
Chr5_+_8541713 1.97 AT5G24860.3
AT5G24860.1
FPF1
flowering promoting factor 1
Chr2_-_19166949 1.97 AT2G46680.2
AT2G46680.1
HB-7
homeobox 7
Chr5_-_5018347 1.97 AT5G15450.1
CLPB3
casein lytic proteinase B3
Chr5_+_26884203 1.97 AT5G67385.3
AT5G67385.1
AT5G67385.5
AT5G67385.4
AT5G67385
Phototropic-responsive NPH3 family protein
Chr3_-_17658353 1.96 AT3G47860.1
CHL
chloroplastic lipocalin
Chr4_+_10861382 1.96 AT4G20070.1
AT4G20070.2
AAH
allantoate amidohydrolase
Chr1_-_3590928 1.96 AT1G10760.1
AT1G10760.3
SEX1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein
Chr3_-_3282131 1.96 AT3G10525.1
LGO
LOSS OF GIANT CELLS FROM ORGANS
Chr1_+_23888832 1.95 AT1G64370.1
AT1G64370
filaggrin-like protein
Chr5_+_21020014 1.94 AT5G51750.1
SBT1.3
subtilase 1.3
Chr3_+_2907479 1.93 AT3G09450.1
AT3G09450
fusaric acid resistance family protein
Chr5_-_17888530 1.93 AT5G44400.1
AT5G44400
FAD-binding Berberine family protein
Chr3_+_3923515 1.92 AT3G12320.1
AT3G12320
hypothetical protein
Chr5_-_18026077 1.92 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr5_+_5995323 1.92 AT5G18130.1
AT5G18130
transmembrane protein
Chr5_+_23167774 1.90 AT5G57180.1
AT5G57180.2
AT5G57180.4
AT5G57180.3
CIA2
chloroplast import apparatus 2
Chr3_+_15567067 1.90 AT3G43670.1
AT3G43670
Copper amine oxidase family protein
Chr4_-_9583290 1.89 AT4G17030.1
EXLB1
expansin-like B1
Chr3_+_20788610 1.89 AT3G56010.1
AT3G56010
transmembrane protein
Chr1_-_13698739 1.88 AT1G36370.1
SHM7
serine hydroxymethyltransferase 7
Chr5_+_17171807 1.88 AT5G42825.1
AT5G42825
hypothetical protein
Chr5_-_8160163 1.87 AT5G24120.3
SIGE
sigma factor E
Chr1_+_12026936 1.87 AT1G33170.1
AT1G33170
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_-_1149261 1.87 AT2G03750.1
AT2G03750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_-_6800903 1.86 AT5G20140.1
AT5G20140.2
HBP5
SOUL heme-binding family protein
Chr3_-_17401696 1.85 AT3G47250.1
AT3G47250
transmembrane protein, putative (DUF247)
Chr4_-_1197630 1.85 AT4G02710.1
NET1C
Kinase interacting (KIP1-like) family protein
Chr4_-_18370698 1.85 AT4G39510.1
CYP96A12
cytochrome P450, family 96, subfamily A, polypeptide 12
Chr5_+_24279897 1.85 AT5G60360.3
AT5G60360.2
ALP
aleurain-like protease
Chr4_-_16116383 1.84 AT4G33500.1
AT4G33500
Protein phosphatase 2C family protein
Chr2_+_19269558 1.84 AT2G46900.1
AT2G46900
transcription factor-like protein
Chr5_+_25400317 1.84 AT5G63420.1
emb2746
RNA-metabolising metallo-beta-lactamase family protein
Chr1_+_29815470 1.84 AT1G79270.1
AT1G79270.3
AT1G79270.2
AT1G79270.4
ECT8
evolutionarily conserved C-terminal region 8
Chr3_-_18684346 1.84 AT3G50370.1
AT3G50370.2
AT3G50370
hypothetical protein
Chr1_+_11568654 1.83 AT1G32160.1
AT1G32160
beta-casein (DUF760)
Chr5_-_24836933 1.82 AT5G61820.1
AT5G61820.2
AT5G61820
stress up-regulated Nod 19 protein
Chr5_-_19135414 1.82 AT5G47110.1
LIL3:2
Chlorophyll A-B binding family protein
Chr2_-_827994 1.82 AT2G02850.1
ARPN
plantacyanin
Chr5_+_21673432 1.82 AT5G53420.4
AT5G53420.1
AT5G53420.5
AT5G53420.3
AT5G53420
CCT motif family protein
Chr1_-_22096620 1.81 AT1G60010.1
AT1G60010
D-ribose-binding periplasmic protein
Chr1_-_26231375 1.81 AT1G69730.1
AT1G69730
Wall-associated kinase family protein
Chr4_+_7607241 1.81 AT4G13030.1
AT4G13030.2
AT4G13030.3
AT4G13030
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_9352444 1.81 AT3G25690.4
AT3G25690.5
AT3G25690.6
CHUP1
Hydroxyproline-rich glycoprotein family protein
Chr1_-_4921535 1.81 AT1G14380.3
AT1G14380.4
AT1G14380.2
AT1G14380.5
AT1G14380.6
AT1G14380.7
AT1G14380.1
IQD28
IQ-domain 28
Chr1_-_30142697 1.80 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_22429495 1.80 AT5G55300.3
AT5G55300.2
AT5G55300.1
TOP1ALPHA
DNA topoisomerase I alpha
Chr3_+_3923735 1.80 AT3G12320.2
AT3G12320
hypothetical protein
Chr1_-_29715017 1.77 AT1G78990.1
AT1G78990
HXXXD-type acyl-transferase family protein
Chr5_+_589199 1.77 AT5G02620.2
AT5G02620.3
AT5G02620.4
ANK1
ankyrin-like1
Chr4_-_11659105 1.77 AT4G21990.1
AT4G21990.2
APR3
APS reductase 3
Chr2_+_19065536 1.77 AT2G46450.1
AT2G46450.3
AT2G46450.4
AT2G46450.2
CNGC12
cyclic nucleotide-gated channel 12
Chr2_+_17894796 1.76 AT2G43030.1
AT2G43030
Ribosomal protein L3 family protein
Chr1_+_9829261 1.76 AT1G28135.1
AT1G28135
hypothetical protein
Chr1_-_8203301 1.76 AT1G23140.1
AT1G23140
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr1_-_26076374 1.75 AT1G69360.1
AT1G69360
T-box transcription factor, putative (DUF863)
Chr4_-_10647079 1.74 AT4G19520.1
AT4G19520.3
AT4G19520.2
AT4G19520.5
AT4G19520.4
AT4G19520
disease resistance protein (TIR-NBS-LRR class) family
Chr3_+_16945230 1.74 AT3G46130.2
AT3G46130.1
MYB48
myb domain protein 48
Chr5_+_21910471 1.74 AT5G53970.1
TAT7
Tyrosine transaminase family protein
Chr5_-_23431198 1.74 AT5G57830.1
AT5G57830
zein-binding protein (Protein of unknown function, DUF593)
Chr1_+_4467094 1.74 AT1G13110.1
CYP71B7
cytochrome P450, family 71 subfamily B, polypeptide 7
Chr5_+_17550179 1.73 AT5G43700.1
ATAUX2-11
AUX/IAA transcriptional regulator family protein
Chr4_+_14348637 1.73 AT4G29110.1
AT4G29110
cotton fiber protein
Chr2_-_7748502 1.72 AT2G17820.1
HK1
histidine kinase 1
Chr1_-_3590701 1.72 AT1G10760.2
SEX1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein
Chr3_+_22285138 1.71 AT3G60300.1
AT3G60300.2
AT3G60300
RWD domain-containing protein
Chr5_-_21429447 1.71 AT5G52870.2
AT5G52870.1
MAKR5
membrane-associated kinase regulator
Chr3_-_21477620 1.71 AT3G58010.1
PGL34
plastoglobulin 34kD
Chr3_+_4544364 1.71 AT3G13810.5
AT3G13810.3
AT3G13810.4
AT3G13810.6
AT3G13810.2
AT3G13810.1
IDD11
indeterminate(ID)-domain 11
Chr2_-_10113005 1.71 AT2G23760.3
AT2G23760.4
AT2G23760.1
BLH4
BEL1-like homeodomain 4
Chr2_-_19114173 1.71 AT2G46550.3
AT2G46550.1
AT2G46550.2
AT2G46550
transmembrane protein
Chr4_-_16799553 1.71 AT4G35300.11
AT4G35300.1
AT4G35300.2
AT4G35300.9
AT4G35300.3
AT4G35300.8
AT4G35300.6
AT4G35300.5
AT4G35300.4
AT4G35300.7
AT4G35300.10
TMT2
tonoplast monosaccharide transporter2
Chr3_+_9353010 1.70 AT3G25690.2
AT3G25690.3
CHUP1
Hydroxyproline-rich glycoprotein family protein
Chr1_-_22977625 1.70 AT1G62180.2
APR2
5'adenylylphosphosulfate reductase 2
Chr5_+_24279660 1.70 AT5G60360.1
ALP
aleurain-like protease
Chr2_+_8125128 1.70 AT2G18750.1
AT2G18750.3
AT2G18750.2
AT2G18750
Calmodulin-binding protein
Chr3_+_16383595 1.69 AT3G44880.1
ACD1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
Chr5_+_22671113 1.69 AT5G55990.1
AT5G55990.2
CBL2
calcineurin B-like protein 2
Chr1_+_5885007 1.69 AT1G17220.1
FUG1
Translation initiation factor 2, small GTP-binding protein
Chr5_+_18856454 1.69 AT5G46500.4
AT5G46500.3
AT5G46500.1
AT5G46500
protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein
Chr3_+_7789901 1.68 AT3G22104.2
AT3G22104.3
AT3G22104
Phototropic-responsive NPH3 family protein
Chr3_+_16945433 1.68 AT3G46130.3
AT3G46130.4
MYB48
myb domain protein 48
Chr5_-_18142147 1.68 AT5G44930.3
AT5G44930.1
AT5G44930.2
ARAD2
Exostosin family protein
Chr3_-_5491332 1.68 AT3G16190.1
AT3G16190
Isochorismatase family protein
Chr5_+_5649057 1.68 AT5G17170.1
AT5G17170.2
ENH1
rubredoxin family protein
Chr1_-_22977885 1.67 AT1G62180.1
APR2
5'adenylylphosphosulfate reductase 2
Chr1_+_28684551 1.67 AT1G76450.1
AT1G76450
Photosystem II reaction center PsbP family protein
Chr1_-_1286619 1.67 AT1G04620.1
HCAR
coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family
Chr2_+_7988165 1.66 AT2G18390.1
TTN5
ADP-ribosylation factor family protein
Chr5_-_304185 1.66 AT5G01780.1
AT5G01780.4
AT5G01780.3
AT5G01780.5
AT5G01780.2
AT5G01780
2-oxoglutarate-dependent dioxygenase family protein
Chr5_+_21317130 1.66 AT5G52530.3
AT5G52530.2
AT5G52530.1
AT5G52530
dentin sialophosphoprotein-like protein
Chr3_+_11810726 1.66 AT3G30180.1
BR6OX2
brassinosteroid-6-oxidase 2
Chr5_-_22944970 1.65 AT5G56710.2
AT5G56710.1
AT5G56710
Ribosomal protein L31e family protein
Chr3_+_3239180 1.65 AT3G10420.1
SPD1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_9848628 1.65 AT3G26780.1
MEF14
Phosphoglycerate mutase family protein
Chr3_-_3025945 1.65 AT3G09850.1
AT3G09850
D111/G-patch domain-containing protein
Chr4_-_13958107 1.65 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr4_-_5932475 1.64 AT4G09350.1
NdhT
Chaperone DnaJ-domain superfamily protein
Chr3_+_2465235 1.64 AT3G07720.1
AT3G07720
Galactose oxidase/kelch repeat superfamily protein
Chr4_+_13828422 1.64 AT4G27710.2
CYP709B3
cytochrome P450, family 709, subfamily B, polypeptide 3
Chr1_-_19690589 1.64 AT1G52880.1
NAM
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr3_-_1305879 1.64 AT3G04760.2
AT3G04760.1
AT3G04760
Pentatricopeptide repeat (PPR-like) superfamily protein
Chr5_+_22318305 1.63 AT5G55000.2
AT5G55000.1
FIP2
potassium channel tetramerization domain-containing protein / pentapeptide repeat-containing protein
Chr3_+_3238996 1.63 AT3G10420.2
SPD1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_1706736 1.63 AT1G05690.1
BT3
BTB and TAZ domain protein 3
Chr1_+_4351019 1.62 AT1G12770.1
AT1G12770.2
EMB1586
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_20713499 1.62 AT1G55480.1
ZKT
protein containing PDZ domain, a K-box domain, and a TPR region
Chr4_+_13828189 1.62 AT4G27710.1
CYP709B3
cytochrome P450, family 709, subfamily B, polypeptide 3
Chr3_+_5447272 1.61 AT3G16060.1
AT3G16060
ATP binding microtubule motor family protein
Chr4_-_17279271 1.61 AT4G36640.2
AT4G36640.3
AT4G36640.1
AT4G36640
Sec14p-like phosphatidylinositol transfer family protein
Chr1_-_23745385 1.60 AT1G63990.1
AT1G63990.2
SPO11-2
sporulation 11-2
Chr5_-_19648362 1.60 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_1188434 1.60 AT1G04400.2
CRY2
cryptochrome 2
Chr1_-_27732273 1.60 AT1G73730.2
EIL3
ETHYLENE-INSENSITIVE3-like 3
Chr1_+_29300971 1.60 AT1G77930.3
AT1G77930.1
AT1G77930.2
AT1G77930
Chaperone DnaJ-domain superfamily protein
Chr1_-_6555610 1.60 AT1G18970.1
GLP4
germin-like protein 4
Chr1_-_22382422 1.60 AT1G60790.1
TBL2
trichome birefringence-like protein (DUF828)
Chr1_-_7513396 1.60 AT1G21460.2
AT1G21460.1
SWEET1
Nodulin MtN3 family protein
Chr1_-_2184193 1.60 AT1G07110.1
F2KP
fructose-2,6-bisphosphatase
Chr1_+_17342739 1.59 AT1G47310.1
AT1G47310
signal peptidase I
Chr2_+_8779667 1.59 AT2G20340.1
AT2G20340.2
AAS
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr4_-_8243910 1.59 AT4G14320.2
AT4G14320.1
AT4G14320
Zinc-binding ribosomal protein family protein
Chr3_+_19587756 1.59 AT3G52850.1
VSR1
vacuolar sorting receptor homolog 1
Chr1_-_1188696 1.58 AT1G04400.1
CRY2
cryptochrome 2

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G49560

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 10.9 GO:0055129 L-proline biosynthetic process(GO:0055129)
1.7 10.3 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
1.6 6.5 GO:0015675 nickel cation transport(GO:0015675)
1.1 5.4 GO:0019419 sulfate reduction(GO:0019419)
1.1 3.2 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
1.1 3.2 GO:1902347 response to strigolactone(GO:1902347)
1.0 4.9 GO:0010360 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.9 2.8 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.8 4.8 GO:0009413 response to flooding(GO:0009413)
0.7 0.7 GO:0006499 N-terminal protein lipidation(GO:0006498) N-terminal protein myristoylation(GO:0006499) protein myristoylation(GO:0018377)
0.7 2.0 GO:0098532 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.7 2.0 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.6 2.6 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.6 1.9 GO:0032025 response to cobalt ion(GO:0032025)
0.6 0.6 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.6 1.9 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.6 3.2 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.6 0.6 GO:0043605 cellular amide catabolic process(GO:0043605)
0.6 1.2 GO:0071493 cellular response to UV-B(GO:0071493)
0.6 2.9 GO:0045922 negative regulation of fatty acid metabolic process(GO:0045922)
0.6 2.8 GO:0010135 ureide metabolic process(GO:0010135) ureide catabolic process(GO:0010136)
0.6 0.6 GO:0006145 purine nucleobase catabolic process(GO:0006145)
0.6 1.7 GO:0071217 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.6 1.7 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.5 1.6 GO:0009663 plasmodesma organization(GO:0009663)
0.5 2.7 GO:0009558 embryo sac cellularization(GO:0009558)
0.5 2.1 GO:0006741 NADP biosynthetic process(GO:0006741)
0.5 2.1 GO:0035865 cellular response to potassium ion(GO:0035865)
0.5 3.1 GO:0048439 flower morphogenesis(GO:0048439)
0.5 4.7 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.5 2.0 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.5 2.5 GO:0060919 auxin influx(GO:0060919)
0.5 2.0 GO:1901334 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.5 1.5 GO:0080171 lytic vacuole organization(GO:0080171)
0.5 2.0 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.5 1.5 GO:0032990 cell part morphogenesis(GO:0032990) mitochondrion morphogenesis(GO:0070584)
0.5 0.5 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.5 1.4 GO:0007019 microtubule depolymerization(GO:0007019)
0.5 2.8 GO:0051205 protein insertion into membrane(GO:0051205)
0.5 2.8 GO:0010569 regulation of double-strand break repair via homologous recombination(GO:0010569)
0.5 1.9 GO:0010618 aerenchyma formation(GO:0010618)
0.5 1.8 GO:0033306 phytol metabolic process(GO:0033306)
0.5 2.3 GO:0051319 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.5 2.3 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.4 2.2 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.4 1.3 GO:0016237 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.4 1.3 GO:0019695 choline metabolic process(GO:0019695)
0.4 1.3 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.4 1.3 GO:0010024 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.4 0.9 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.4 5.5 GO:0048317 seed morphogenesis(GO:0048317)
0.4 1.7 GO:0009660 amyloplast organization(GO:0009660)
0.4 3.6 GO:0009819 drought recovery(GO:0009819)
0.4 2.0 GO:0080119 ER body organization(GO:0080119)
0.4 1.2 GO:0071569 protein ufmylation(GO:0071569)
0.4 5.2 GO:0042793 transcription from plastid promoter(GO:0042793)
0.4 1.2 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.4 10.5 GO:0009902 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.4 3.5 GO:0015804 neutral amino acid transport(GO:0015804)
0.4 1.5 GO:0015720 allantoin transport(GO:0015720)
0.4 0.8 GO:0043271 negative regulation of ion transport(GO:0043271)
0.4 1.1 GO:0070537 histone H2A K63-linked deubiquitination(GO:0070537)
0.4 1.1 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.4 1.5 GO:0050992 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.4 1.5 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.4 1.1 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.4 1.8 GO:0070863 regulation of protein exit from endoplasmic reticulum(GO:0070861) positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.4 3.7 GO:0009610 response to symbiotic fungus(GO:0009610)
0.4 2.2 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.4 2.5 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.4 2.5 GO:0006000 fructose metabolic process(GO:0006000)
0.4 1.4 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.4 2.5 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.4 1.8 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.4 1.1 GO:0030242 pexophagy(GO:0030242)
0.4 1.8 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
0.3 1.4 GO:0009557 antipodal cell differentiation(GO:0009557)
0.3 2.4 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.3 1.0 GO:0072526 pyridoxal metabolic process(GO:0042817) pyridine-containing compound catabolic process(GO:0072526)
0.3 1.0 GO:0046505 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.3 1.0 GO:1905182 regulation of urease activity(GO:1905181) positive regulation of urease activity(GO:1905182)
0.3 1.0 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.3 2.6 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.3 1.3 GO:0072718 response to cisplatin(GO:0072718)
0.3 1.6 GO:0000706 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.3 1.3 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.3 0.9 GO:0002240 response to molecule of oomycetes origin(GO:0002240)
0.3 2.5 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.3 0.9 GO:0006212 uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483)
0.3 0.9 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.3 0.9 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.3 1.2 GO:0046146 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.3 0.9 GO:0010444 guard mother cell differentiation(GO:0010444)
0.3 3.0 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.3 0.9 GO:0009584 detection of visible light(GO:0009584)
0.3 0.9 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.3 0.9 GO:0009915 phloem sucrose loading(GO:0009915)
0.3 3.8 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.3 1.2 GO:0016598 protein arginylation(GO:0016598)
0.3 1.2 GO:0061085 regulation of histone H3-K27 methylation(GO:0061085)
0.3 0.9 GO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.3 1.4 GO:0010032 meiotic chromosome condensation(GO:0010032)
0.3 0.9 GO:1901379 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.3 1.4 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.3 5.1 GO:0019430 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.3 0.8 GO:0036115 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.3 1.7 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.3 6.7 GO:0010207 photosystem II assembly(GO:0010207)
0.3 0.8 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.3 1.4 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.3 0.6 GO:0051099 positive regulation of binding(GO:0051099)
0.3 0.8 GO:0002100 tRNA wobble adenosine to inosine editing(GO:0002100)
0.3 0.5 GO:0006801 superoxide metabolic process(GO:0006801)
0.3 0.8 GO:0090239 regulation of histone H4 acetylation(GO:0090239)
0.3 1.1 GO:0000012 single strand break repair(GO:0000012)
0.3 1.3 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.3 1.9 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.3 1.1 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.3 0.8 GO:0090615 mitochondrial mRNA processing(GO:0090615)
0.3 0.8 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.3 0.5 GO:0030026 cellular manganese ion homeostasis(GO:0030026)
0.3 1.6 GO:0060866 leaf abscission(GO:0060866)
0.3 8.0 GO:0006012 galactose metabolic process(GO:0006012)
0.3 0.8 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.3 3.0 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.3 1.0 GO:1902975 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.3 0.5 GO:0043633 polyadenylation-dependent RNA catabolic process(GO:0043633) polyadenylation-dependent ncRNA catabolic process(GO:0043634) nuclear ncRNA surveillance(GO:0071029) nuclear polyadenylation-dependent rRNA catabolic process(GO:0071035) nuclear polyadenylation-dependent ncRNA catabolic process(GO:0071046)
0.3 1.0 GO:0043461 proton-transporting ATP synthase complex assembly(GO:0043461) proton-transporting ATP synthase complex biogenesis(GO:0070272)
0.2 1.0 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.2 2.0 GO:0016926 protein desumoylation(GO:0016926)
0.2 0.7 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.2 2.0 GO:0042219 cellular modified amino acid catabolic process(GO:0042219)
0.2 1.2 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.2 4.4 GO:0000373 Group II intron splicing(GO:0000373)
0.2 0.7 GO:0010447 response to acidic pH(GO:0010447)
0.2 0.7 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.2 2.4 GO:0009942 longitudinal axis specification(GO:0009942)
0.2 4.1 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.2 1.2 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.2 0.7 GO:0080153 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.2 1.2 GO:0071277 cellular response to calcium ion(GO:0071277)
0.2 0.7 GO:0001192 maintenance of transcriptional fidelity during DNA-templated transcription elongation(GO:0001192) maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter(GO:0001193)
0.2 0.7 GO:0051418 interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)
0.2 0.9 GO:0035305 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.2 0.9 GO:0071836 nectar secretion(GO:0071836)
0.2 0.7 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
0.2 0.9 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.2 1.1 GO:0031112 positive regulation of microtubule polymerization or depolymerization(GO:0031112) positive regulation of microtubule polymerization(GO:0031116)
0.2 0.5 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.2 0.9 GO:0016098 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.2 2.0 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.2 1.1 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.2 0.2 GO:0007349 cellularization(GO:0007349)
0.2 2.8 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.2 1.3 GO:0072337 modified amino acid transport(GO:0072337)
0.2 4.1 GO:0009638 phototropism(GO:0009638)
0.2 2.3 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.2 0.6 GO:0043171 peptide catabolic process(GO:0043171)
0.2 4.4 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.2 0.6 GO:0071047 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.2 0.2 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.2 3.3 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.2 0.6 GO:0045835 regulation of reciprocal meiotic recombination(GO:0010520) negative regulation of meiotic nuclear division(GO:0045835) negative regulation of meiotic cell cycle(GO:0051447)
0.2 0.6 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.2 1.4 GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.2 1.4 GO:1903959 regulation of anion channel activity(GO:0010359) regulation of anion transmembrane transport(GO:1903959)
0.2 1.6 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.2 0.8 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.2 1.5 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.2 0.6 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.2 2.1 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.2 5.0 GO:0070417 cellular response to cold(GO:0070417)
0.2 0.4 GO:0036473 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.2 1.3 GO:0046900 tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.2 0.9 GO:0070601 centromeric sister chromatid cohesion(GO:0070601)
0.2 1.3 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.2 0.8 GO:0097298 regulation of nucleus size(GO:0097298)
0.2 1.9 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.2 0.2 GO:0006517 protein deglycosylation(GO:0006517)
0.2 0.9 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.2 3.3 GO:1901401 regulation of tetrapyrrole metabolic process(GO:1901401)
0.2 1.9 GO:0009880 embryonic pattern specification(GO:0009880)
0.2 1.1 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.2 1.8 GO:0070370 cellular heat acclimation(GO:0070370)
0.2 2.7 GO:0007008 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.2 0.9 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.2 0.5 GO:0019320 hexose catabolic process(GO:0019320)
0.2 0.9 GO:0006446 regulation of translational initiation(GO:0006446)
0.2 1.6 GO:0055070 copper ion homeostasis(GO:0055070)
0.2 6.6 GO:0010286 heat acclimation(GO:0010286)
0.2 0.5 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.2 7.3 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.2 1.1 GO:0080120 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.2 0.3 GO:0034969 histone arginine methylation(GO:0034969)
0.2 4.6 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.2 1.7 GO:0016131 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.2 0.7 GO:0007041 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.2 2.2 GO:0007602 phototransduction(GO:0007602) detection of light stimulus(GO:0009583) red, far-red light phototransduction(GO:0009585)
0.2 2.5 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.2 0.7 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.2 0.5 GO:0010394 homogalacturonan biosynthetic process(GO:0010289) homogalacturonan metabolic process(GO:0010394)
0.2 3.1 GO:0031425 chloroplast RNA processing(GO:0031425)
0.2 0.3 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.2 5.2 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.2 0.6 GO:0009446 putrescine metabolic process(GO:0009445) putrescine biosynthetic process(GO:0009446) putrescine biosynthetic process from arginine(GO:0033388)
0.2 1.6 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.2 0.6 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056)
0.2 0.3 GO:0000255 allantoin metabolic process(GO:0000255)
0.2 0.3 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.2 7.2 GO:0009911 positive regulation of flower development(GO:0009911)
0.2 0.8 GO:0031125 rRNA 3'-end processing(GO:0031125)
0.2 7.0 GO:0015994 chlorophyll metabolic process(GO:0015994)
0.2 4.9 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.2 0.5 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.2 0.6 GO:0070828 heterochromatin organization(GO:0070828)
0.2 5.8 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.2 0.6 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.2 0.9 GO:0016120 carotene biosynthetic process(GO:0016120)
0.2 1.1 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.2 0.2 GO:0071398 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.2 0.9 GO:0006624 vacuolar protein processing(GO:0006624)
0.2 4.1 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.2 0.8 GO:0080121 AMP transport(GO:0080121)
0.2 2.5 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.2 2.5 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.2 6.1 GO:0010114 response to red light(GO:0010114)
0.2 0.5 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.2 1.1 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.1 1.6 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 14.4 GO:0018105 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.1 0.4 GO:0016540 protein autoprocessing(GO:0016540)
0.1 1.3 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.1 0.9 GO:0034087 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.1 0.7 GO:0046621 negative regulation of organ growth(GO:0046621)
0.1 0.1 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.1 0.4 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 0.6 GO:0019499 cyanide metabolic process(GO:0019499)
0.1 1.0 GO:0009298 GDP-mannose biosynthetic process(GO:0009298)
0.1 2.1 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.1 1.1 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.1 0.7 GO:0080117 secondary growth(GO:0080117)
0.1 0.6 GO:0006527 arginine catabolic process(GO:0006527)
0.1 0.4 GO:0080178 5-carbamoylmethyl uridine residue modification(GO:0080178)
0.1 3.3 GO:0051260 protein homooligomerization(GO:0051260)
0.1 3.2 GO:0032509 endosome transport via multivesicular body sorting pathway(GO:0032509)
0.1 1.2 GO:0010037 response to carbon dioxide(GO:0010037)
0.1 0.4 GO:0040030 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.1 1.2 GO:0006559 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.1 0.8 GO:0015846 polyamine transport(GO:0015846)
0.1 0.8 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.1 0.4 GO:0010273 detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169)
0.1 8.5 GO:0007018 microtubule-based movement(GO:0007018)
0.1 0.8 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.1 1.7 GO:0015976 carbon utilization(GO:0015976)
0.1 0.5 GO:0030322 stabilization of membrane potential(GO:0030322)
0.1 0.6 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.1 0.4 GO:0051098 regulation of binding(GO:0051098)
0.1 1.0 GO:0071329 cellular response to sucrose stimulus(GO:0071329)
0.1 0.6 GO:0015074 DNA integration(GO:0015074)
0.1 1.1 GO:0050777 negative regulation of immune response(GO:0050777)
0.1 0.6 GO:0010155 regulation of proton transport(GO:0010155)
0.1 1.6 GO:2000067 regulation of root morphogenesis(GO:2000067)
0.1 5.4 GO:0002181 cytoplasmic translation(GO:0002181)
0.1 0.4 GO:0018315 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)
0.1 0.9 GO:0080113 regulation of seed growth(GO:0080113)
0.1 0.6 GO:0007142 male meiosis II(GO:0007142)
0.1 0.6 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.1 1.1 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 0.7 GO:0045899 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.1 0.5 GO:0045046 protein import into peroxisome membrane(GO:0045046)
0.1 1.3 GO:0016559 peroxisome fission(GO:0016559)
0.1 3.5 GO:0006413 translational initiation(GO:0006413)
0.1 1.1 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.1 0.7 GO:0000719 photoreactive repair(GO:0000719)
0.1 0.5 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.9 GO:0071248 cellular response to metal ion(GO:0071248)
0.1 0.7 GO:0044211 CTP salvage(GO:0044211)
0.1 0.4 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.1 2.0 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.1 1.0 GO:0010088 phloem development(GO:0010088)
0.1 1.1 GO:0006450 regulation of translational fidelity(GO:0006450)
0.1 3.0 GO:0042026 protein refolding(GO:0042026)
0.1 3.0 GO:0010027 thylakoid membrane organization(GO:0010027)
0.1 0.3 GO:0043982 histone H4-K8 acetylation(GO:0043982)
0.1 1.3 GO:0009395 phospholipid catabolic process(GO:0009395)
0.1 2.9 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.1 0.5 GO:0048629 trichome patterning(GO:0048629)
0.1 0.3 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 0.5 GO:0032950 regulation of beta-glucan metabolic process(GO:0032950) regulation of beta-glucan biosynthetic process(GO:0032951) regulation of cellulose biosynthetic process(GO:2001006)
0.1 0.6 GO:2001022 positive regulation of response to DNA damage stimulus(GO:2001022)
0.1 1.5 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 1.0 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 0.4 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.1 2.4 GO:0098754 detoxification(GO:0098754)
0.1 1.0 GO:0006491 N-glycan processing(GO:0006491)
0.1 0.4 GO:0000055 ribosomal large subunit export from nucleus(GO:0000055)
0.1 7.3 GO:0016579 protein deubiquitination(GO:0016579)
0.1 1.2 GO:0060321 acceptance of pollen(GO:0060321)
0.1 1.6 GO:0008544 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.1 4.7 GO:0010224 response to UV-B(GO:0010224)
0.1 1.6 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.1 4.9 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.1 3.8 GO:0016145 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.7 GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.1 0.9 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.1 2.3 GO:0009269 response to desiccation(GO:0009269)
0.1 0.2 GO:0046352 disaccharide catabolic process(GO:0046352)
0.1 0.8 GO:0043967 histone H4 acetylation(GO:0043967)
0.1 2.3 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.1 3.5 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.1 0.5 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.1 0.9 GO:0010375 stomatal complex patterning(GO:0010375)
0.1 0.9 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.1 2.3 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.1 1.4 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 0.9 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.1 0.8 GO:0031221 arabinan metabolic process(GO:0031221)
0.1 0.3 GO:0032418 lysosome localization(GO:0032418)
0.1 0.6 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.1 0.8 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.1 1.1 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 0.4 GO:0009560 embryo sac egg cell differentiation(GO:0009560)
0.1 1.5 GO:0016117 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.1 0.4 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.1 0.2 GO:0090113 regulation of COPII vesicle coating(GO:0003400) regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis(GO:0090113)
0.1 0.2 GO:0043268 positive regulation of potassium ion transport(GO:0043268)
0.1 3.9 GO:0045732 positive regulation of protein catabolic process(GO:0045732)
0.1 0.5 GO:0060151 peroxisome localization(GO:0060151)
0.1 0.4 GO:0030104 water homeostasis(GO:0030104)
0.1 0.5 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 0.7 GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement(GO:1901527)
0.1 0.5 GO:1901006 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.1 0.1 GO:0010045 response to nickel cation(GO:0010045)
0.1 0.5 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 2.2 GO:0019252 starch biosynthetic process(GO:0019252)
0.1 0.5 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 2.4 GO:0006284 base-excision repair(GO:0006284)
0.1 0.4 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 1.0 GO:0000266 mitochondrial fission(GO:0000266)
0.1 0.8 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.1 0.4 GO:0016553 base conversion or substitution editing(GO:0016553)
0.1 1.7 GO:0071472 cellular response to salt stress(GO:0071472)
0.1 1.5 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.1 0.3 GO:0042256 mature ribosome assembly(GO:0042256)
0.1 0.9 GO:0032881 regulation of polysaccharide metabolic process(GO:0032881)
0.1 0.7 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.1 1.6 GO:0031167 rRNA methylation(GO:0031167)
0.1 1.6 GO:0005983 starch catabolic process(GO:0005983)
0.1 8.5 GO:0048511 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)
0.1 0.8 GO:0046512 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.1 0.8 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.1 1.1 GO:0042274 ribosomal small subunit biogenesis(GO:0042274)
0.1 1.9 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.1 0.3 GO:0034389 lipid particle organization(GO:0034389)
0.1 0.4 GO:0043486 histone exchange(GO:0043486)
0.1 0.5 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.1 0.3 GO:1902850 mitotic spindle assembly(GO:0090307) microtubule cytoskeleton organization involved in mitosis(GO:1902850)
0.1 0.5 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.1 0.3 GO:0006825 copper ion transport(GO:0006825)
0.1 1.2 GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation(GO:0000394)
0.1 2.0 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.1 0.5 GO:0016558 protein import into peroxisome matrix(GO:0016558)
0.1 1.3 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.1 0.8 GO:0048829 root cap development(GO:0048829)
0.1 1.0 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.1 0.9 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.1 0.7 GO:0010540 basipetal auxin transport(GO:0010540)
0.1 0.6 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.1 0.7 GO:1903008 organelle disassembly(GO:1903008)
0.1 0.4 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.1 1.3 GO:0016482 cytosolic transport(GO:0016482)
0.1 0.6 GO:0010047 fruit dehiscence(GO:0010047)
0.1 0.6 GO:0050821 protein stabilization(GO:0050821)
0.1 0.3 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.1 0.3 GO:0080187 floral organ senescence(GO:0080187)
0.1 1.5 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.1 1.3 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.1 6.5 GO:0009657 plastid organization(GO:0009657)
0.1 1.1 GO:0009959 negative gravitropism(GO:0009959)
0.1 0.2 GO:0033617 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.1 0.2 GO:0030259 lipid glycosylation(GO:0030259)
0.1 0.3 GO:0019401 alditol biosynthetic process(GO:0019401)
0.1 1.0 GO:0010091 trichome branching(GO:0010091)
0.1 0.7 GO:0006672 ceramide metabolic process(GO:0006672)
0.1 0.9 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.1 2.4 GO:0006418 tRNA aminoacylation for protein translation(GO:0006418)
0.1 0.3 GO:0019632 shikimate metabolic process(GO:0019632)
0.1 0.5 GO:0045116 protein neddylation(GO:0045116)
0.1 0.4 GO:0046466 sphingolipid catabolic process(GO:0030149) membrane lipid catabolic process(GO:0046466)
0.1 0.2 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.1 0.5 GO:1990937 xylan acetylation(GO:1990937)
0.1 0.8 GO:0080156 mitochondrial mRNA modification(GO:0080156)
0.1 1.2 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.1 0.4 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.1 1.6 GO:0006473 protein acetylation(GO:0006473)
0.0 0.1 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.0 0.3 GO:0051781 positive regulation of cell division(GO:0051781)
0.0 0.5 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.0 0.5 GO:0006265 DNA topological change(GO:0006265)
0.0 0.4 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 2.6 GO:0072350 tricarboxylic acid metabolic process(GO:0072350)
0.0 0.7 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.3 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.3 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.6 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.2 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 1.4 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.4 GO:0061727 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.8 GO:0006085 acetyl-CoA biosynthetic process(GO:0006085)
0.0 1.1 GO:0042255 ribosome assembly(GO:0042255)
0.0 1.3 GO:0006338 chromatin remodeling(GO:0006338)
0.0 3.2 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.3 GO:0071470 cellular response to osmotic stress(GO:0071470)
0.0 0.1 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.0 1.5 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.0 1.0 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.0 0.8 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.0 0.9 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.6 GO:0046855 phosphorylated carbohydrate dephosphorylation(GO:0046838) inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.0 0.3 GO:0034644 cellular response to UV(GO:0034644)
0.0 0.3 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.1 GO:0006290 pyrimidine dimer repair(GO:0006290)
0.0 1.0 GO:0042542 response to hydrogen peroxide(GO:0042542)
0.0 0.3 GO:0046916 cellular transition metal ion homeostasis(GO:0046916)
0.0 0.4 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 0.2 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.0 0.2 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 0.7 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.5 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.3 GO:0006278 RNA-dependent DNA biosynthetic process(GO:0006278) telomere maintenance via telomerase(GO:0007004)
0.0 0.4 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 1.1 GO:0006749 glutathione metabolic process(GO:0006749)
0.0 1.5 GO:0018022 peptidyl-lysine methylation(GO:0018022) histone lysine methylation(GO:0034968)
0.0 4.7 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 0.9 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 0.4 GO:0010449 root meristem growth(GO:0010449)
0.0 0.2 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.4 GO:0045727 positive regulation of translation(GO:0045727)
0.0 0.6 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.0 0.1 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.0 0.6 GO:0017038 protein import(GO:0017038)
0.0 0.4 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.4 GO:0055075 potassium ion homeostasis(GO:0055075)
0.0 0.1 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 0.2 GO:0006513 protein monoubiquitination(GO:0006513)
0.0 1.0 GO:1990267 response to transition metal nanoparticle(GO:1990267)
0.0 0.5 GO:0042558 pteridine-containing compound metabolic process(GO:0042558)
0.0 0.1 GO:0010048 vernalization response(GO:0010048)
0.0 0.6 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.2 GO:0000338 protein deneddylation(GO:0000338)
0.0 0.7 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.0 0.0 GO:0046104 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.0 0.2 GO:0042176 regulation of protein catabolic process(GO:0042176)
0.0 0.1 GO:0042723 thiamine metabolic process(GO:0006772) thiamine-containing compound metabolic process(GO:0042723)
0.0 0.1 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.0 0.7 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.5 GO:0007093 mitotic cell cycle checkpoint(GO:0007093)
0.0 0.3 GO:0010267 production of ta-siRNAs involved in RNA interference(GO:0010267)
0.0 0.3 GO:0061572 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.2 GO:0017183 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.0 GO:0043903 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of viral process(GO:0050792)
0.0 3.4 GO:0008380 RNA splicing(GO:0008380)
0.0 0.1 GO:0019253 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.0 0.3 GO:0009089 lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 0.3 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.0 0.2 GO:0051443 positive regulation of ubiquitin-protein transferase activity(GO:0051443) positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 0.3 GO:0019216 regulation of lipid metabolic process(GO:0019216)
0.0 0.2 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.4 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.0 0.0 GO:0044848 cell cycle phase(GO:0022403) biological phase(GO:0044848) mitotic cell cycle phase(GO:0098763)
0.0 0.4 GO:0009082 branched-chain amino acid biosynthetic process(GO:0009082)
0.0 3.9 GO:0043043 peptide biosynthetic process(GO:0043043)
0.0 0.5 GO:0090305 nucleic acid phosphodiester bond hydrolysis(GO:0090305)
0.0 0.1 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.3 GO:0065001 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.0 0.3 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.0 0.4 GO:0009910 negative regulation of flower development(GO:0009910)
0.0 0.3 GO:0007030 Golgi organization(GO:0007030)
0.0 0.0 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.0 0.1 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.0 0.4 GO:0006626 protein targeting to mitochondrion(GO:0006626) protein localization to mitochondrion(GO:0070585) establishment of protein localization to mitochondrion(GO:0072655)
0.0 0.2 GO:0071900 regulation of protein serine/threonine kinase activity(GO:0071900)
0.0 0.1 GO:0051782 negative regulation of cell division(GO:0051782)
0.0 0.0 GO:0040031 snRNA modification(GO:0040031)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 5.7 GO:0031353 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.4 3.5 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.4 0.8 GO:0030093 chloroplast photosystem I(GO:0030093)
0.4 3.3 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.4 1.6 GO:1902911 nucleotide-activated protein kinase complex(GO:0031588) protein kinase complex(GO:1902911)
0.4 8.5 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.4 1.6 GO:0009509 chromoplast(GO:0009509)
0.4 1.2 GO:0005846 nuclear cap binding complex(GO:0005846)
0.4 1.9 GO:0034657 GID complex(GO:0034657)
0.4 8.0 GO:0009508 plastid chromosome(GO:0009508)
0.3 5.5 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.3 2.0 GO:0000796 condensin complex(GO:0000796)
0.3 1.0 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.3 2.0 GO:0009360 DNA polymerase III complex(GO:0009360)
0.3 1.3 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.3 2.8 GO:0005677 chromatin silencing complex(GO:0005677)
0.3 2.8 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.3 1.5 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.3 0.9 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.3 0.9 GO:0033281 TAT protein transport complex(GO:0033281)
0.3 0.9 GO:0032155 equatorial microtubule organizing center(GO:0000923) cell division site part(GO:0032155)
0.3 2.7 GO:0017119 Golgi transport complex(GO:0017119)
0.3 1.1 GO:0018444 translation release factor complex(GO:0018444)
0.3 2.1 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.3 1.1 GO:0034271 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.3 1.6 GO:0030137 COPI-coated vesicle(GO:0030137)
0.3 0.8 GO:1990415 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.3 1.0 GO:0032153 cell division site(GO:0032153)
0.3 2.5 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.3 0.8 GO:0005652 nuclear lamina(GO:0005652)
0.2 1.2 GO:0010007 magnesium chelatase complex(GO:0010007)
0.2 0.7 GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.2 0.7 GO:0031414 N-terminal protein acetyltransferase complex(GO:0031414) NatC complex(GO:0031417)
0.2 2.4 GO:1902562 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.2 0.9 GO:0042788 polysomal ribosome(GO:0042788)
0.2 1.7 GO:0005844 polysome(GO:0005844)
0.2 3.3 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.2 1.4 GO:0030897 HOPS complex(GO:0030897)
0.2 1.6 GO:0070531 BRCA1-A complex(GO:0070531)
0.2 0.6 GO:0005712 chiasma(GO:0005712)
0.2 4.5 GO:0005871 kinesin complex(GO:0005871)
0.2 1.2 GO:0009346 citrate lyase complex(GO:0009346)
0.2 1.5 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.2 1.9 GO:0072546 ER membrane protein complex(GO:0072546)
0.2 1.8 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.2 0.6 GO:0000931 gamma-tubulin large complex(GO:0000931) gamma-tubulin ring complex(GO:0008274) interphase microtubule organizing center(GO:0031021)
0.2 2.6 GO:0031011 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.2 1.1 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.2 0.7 GO:0000811 GINS complex(GO:0000811)
0.2 11.0 GO:0031977 thylakoid lumen(GO:0031977)
0.2 1.2 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.2 1.7 GO:0030119 AP-type membrane coat adaptor complex(GO:0030119)
0.2 2.3 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.2 0.5 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.2 3.1 GO:0010287 plastoglobule(GO:0010287)
0.2 0.5 GO:1990351 transporter complex(GO:1990351)
0.2 2.8 GO:0000792 heterochromatin(GO:0000792)
0.2 1.5 GO:0031209 SCAR complex(GO:0031209)
0.2 0.5 GO:0097361 CIA complex(GO:0097361)
0.1 1.2 GO:0089701 U2AF(GO:0089701)
0.1 1.3 GO:0016272 prefoldin complex(GO:0016272)
0.1 3.0 GO:0010319 stromule(GO:0010319)
0.1 1.2 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 1.1 GO:0010445 nuclear dicing body(GO:0010445)
0.1 1.5 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 2.7 GO:0005771 multivesicular body(GO:0005771)
0.1 0.5 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.1 3.1 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.1 6.8 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 1.2 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1 2.0 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.1 1.9 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.1 0.6 GO:0030141 secretory granule(GO:0030141)
0.1 39.4 GO:0009534 chloroplast thylakoid(GO:0009534)
0.1 2.2 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.1 0.4 GO:0097346 INO80-type complex(GO:0097346)
0.1 1.3 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.1 1.8 GO:0000124 SAGA complex(GO:0000124)
0.1 0.8 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.1 2.0 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.1 2.1 GO:0031965 nuclear membrane(GO:0031965)
0.1 0.7 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.1 0.7 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.1 0.6 GO:0043076 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.1 0.7 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 1.4 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.1 0.9 GO:0070390 transcription export complex 2(GO:0070390)
0.1 1.3 GO:0070062 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.1 0.4 GO:0000172 ribonuclease MRP complex(GO:0000172)
0.1 0.7 GO:0045259 mitochondrial proton-transporting ATP synthase complex(GO:0005753) proton-transporting ATP synthase complex(GO:0045259)
0.1 0.7 GO:0000974 Prp19 complex(GO:0000974)
0.1 0.9 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.3 GO:0035101 FACT complex(GO:0035101)
0.1 0.3 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.1 1.4 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.1 0.6 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.1 1.5 GO:0030136 clathrin-coated vesicle(GO:0030136)
0.1 5.4 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 2.2 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 2.1 GO:0042651 thylakoid membrane(GO:0042651)
0.1 0.6 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.1 0.4 GO:0032807 DNA ligase IV complex(GO:0032807)
0.1 0.5 GO:0005828 kinetochore microtubule(GO:0005828)
0.1 9.1 GO:0000790 nuclear chromatin(GO:0000790)
0.1 0.8 GO:0010168 ER body(GO:0010168)
0.1 0.9 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.1 0.3 GO:0000814 ESCRT II complex(GO:0000814)
0.1 0.2 GO:0045298 tubulin complex(GO:0045298)
0.1 1.0 GO:1902493 histone acetyltransferase complex(GO:0000123) protein acetyltransferase complex(GO:0031248) acetyltransferase complex(GO:1902493)
0.1 1.9 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.1 1.4 GO:0042644 chloroplast nucleoid(GO:0042644)
0.1 7.0 GO:0016604 nuclear body(GO:0016604)
0.1 1.0 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.1 0.3 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.1 0.7 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.1 0.4 GO:0030904 retromer complex(GO:0030904)
0.1 11.7 GO:0000325 plant-type vacuole(GO:0000325)
0.1 0.6 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.1 1.1 GO:0055028 cortical microtubule(GO:0055028)
0.1 27.3 GO:0009941 chloroplast envelope(GO:0009941)
0.1 0.5 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.1 1.6 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.1 0.4 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.1 2.5 GO:0000137 Golgi cis cisterna(GO:0000137)
0.1 23.6 GO:0009532 plastid stroma(GO:0009532)
0.1 1.3 GO:1902554 serine/threonine protein kinase complex(GO:1902554)
0.1 1.6 GO:0005686 U2 snRNP(GO:0005686)
0.1 4.7 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.1 1.5 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.5 GO:0000777 condensed chromosome kinetochore(GO:0000777)
0.1 0.5 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 0.5 GO:0030117 membrane coat(GO:0030117) coated membrane(GO:0048475)
0.1 1.7 GO:0031227 intrinsic component of endoplasmic reticulum membrane(GO:0031227)
0.1 1.0 GO:0035097 histone methyltransferase complex(GO:0035097)
0.1 0.8 GO:0000347 THO complex(GO:0000347)
0.1 4.0 GO:0000785 chromatin(GO:0000785)
0.1 7.1 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 2.1 GO:0032040 small-subunit processome(GO:0032040)
0.1 0.3 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.1 0.6 GO:0000794 condensed nuclear chromosome(GO:0000794)
0.1 0.4 GO:0015934 large ribosomal subunit(GO:0015934)
0.1 1.3 GO:0005764 lysosome(GO:0005764)
0.1 1.8 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.1 0.4 GO:0005787 signal peptidase complex(GO:0005787)
0.0 1.2 GO:0005875 microtubule associated complex(GO:0005875)
0.0 1.2 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.3 GO:0000314 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.0 4.5 GO:0043656 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 0.0 GO:0070993 translation preinitiation complex(GO:0070993)
0.0 0.2 GO:0000922 spindle pole(GO:0000922)
0.0 0.3 GO:0044450 microtubule organizing center part(GO:0044450)
0.0 0.4 GO:0009526 plastid envelope(GO:0009526)
0.0 0.5 GO:0071782 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.0 0.8 GO:0036464 ribonucleoprotein granule(GO:0035770) cytoplasmic ribonucleoprotein granule(GO:0036464)
0.0 0.5 GO:0048500 signal recognition particle, endoplasmic reticulum targeting(GO:0005786) signal recognition particle(GO:0048500)
0.0 0.6 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 1.5 GO:0016592 mediator complex(GO:0016592)
0.0 0.6 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 0.7 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.4 GO:0045283 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.0 0.3 GO:0009574 preprophase band(GO:0009574)
0.0 0.5 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.5 GO:0031304 intrinsic component of mitochondrial inner membrane(GO:0031304)
0.0 0.4 GO:0005838 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.0 4.9 GO:0005840 ribosome(GO:0005840)
0.0 0.5 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 8.2 GO:0031984 organelle subcompartment(GO:0031984)
0.0 0.5 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 117.4 GO:0009536 plastid(GO:0009536)
0.0 1.0 GO:0005681 spliceosomal complex(GO:0005681)
0.0 48.9 GO:0005829 cytosol(GO:0005829)
0.0 0.1 GO:0032301 MutSalpha complex(GO:0032301)
0.0 3.1 GO:0005730 nucleolus(GO:0005730)
0.0 0.3 GO:0009524 phragmoplast(GO:0009524)
0.0 0.4 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.0 0.4 GO:0005635 nuclear envelope(GO:0005635)
0.0 0.4 GO:1990904 ribonucleoprotein complex(GO:1990904)
0.0 0.2 GO:0005669 transcription factor TFIID complex(GO:0005669)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.6 10.5 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
1.7 10.1 GO:0019904 protein domain specific binding(GO:0019904)
1.3 5.1 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
1.3 3.8 GO:0015087 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
1.2 3.7 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
1.2 1.2 GO:0070492 oligosaccharide binding(GO:0070492)
1.0 9.2 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.9 8.1 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.9 6.1 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.8 2.3 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.7 7.8 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.7 2.8 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.6 1.3 GO:0046481 digalactosyldiacylglycerol synthase activity(GO:0046481)
0.6 0.6 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.6 2.4 GO:0080002 indole-3-acetate beta-glucosyltransferase activity(GO:0047215) UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.6 2.4 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.6 1.7 GO:0008311 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.6 1.7 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.5 3.2 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.5 2.1 GO:0070138 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.5 4.1 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.5 0.5 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.5 3.9 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.5 2.9 GO:0030594 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.5 10.6 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.5 1.4 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.5 3.3 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.5 1.4 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.5 1.8 GO:0070402 NADPH binding(GO:0070402)
0.5 1.4 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.4 1.8 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.4 1.3 GO:0000386 second spliceosomal transesterification activity(GO:0000386)
0.4 1.7 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.4 1.7 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.4 2.8 GO:0032977 membrane insertase activity(GO:0032977)
0.4 2.4 GO:0016531 copper chaperone activity(GO:0016531)
0.4 1.2 GO:0022858 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.4 2.3 GO:0030527 structural constituent of chromatin(GO:0030527)
0.4 6.0 GO:0051117 ATPase binding(GO:0051117)
0.4 1.1 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.4 1.1 GO:0070678 preprotein binding(GO:0070678)
0.4 1.5 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.4 1.1 GO:0050997 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.4 3.6 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.4 2.5 GO:0015391 nucleobase:cation symporter activity(GO:0015391)
0.4 2.5 GO:0005034 osmosensor activity(GO:0005034)
0.3 1.4 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.3 1.7 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.3 11.7 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.3 2.3 GO:0016151 nickel cation binding(GO:0016151)
0.3 1.7 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.3 1.0 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
0.3 3.9 GO:0102391 acyl-CoA ligase activity(GO:0003996) decanoate--CoA ligase activity(GO:0102391)
0.3 1.3 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.3 1.6 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.3 1.3 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.3 0.3 GO:0019779 Atg8 activating enzyme activity(GO:0019779)
0.3 0.9 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.3 2.2 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.3 2.4 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.3 2.7 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.3 1.2 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.3 1.2 GO:0004057 arginyltransferase activity(GO:0004057)
0.3 1.4 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.3 2.9 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.3 0.8 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.3 2.5 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.3 0.6 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.3 1.7 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.3 0.8 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.3 0.8 GO:0016530 metallochaperone activity(GO:0016530)
0.3 3.3 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.3 2.4 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.3 3.7 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.3 0.8 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.3 1.3 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.3 0.8 GO:0008481 sphinganine kinase activity(GO:0008481)
0.3 1.0 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.2 1.2 GO:0005223 intracellular cGMP activated cation channel activity(GO:0005223)
0.2 1.0 GO:0004335 galactokinase activity(GO:0004335)
0.2 1.2 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.2 2.0 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.2 1.5 GO:0030544 Hsp70 protein binding(GO:0030544)
0.2 0.7 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.2 1.6 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.2 2.8 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.2 0.9 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.2 1.8 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.2 1.1 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.2 0.4 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.2 2.1 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.2 3.0 GO:0050308 sugar-phosphatase activity(GO:0050308)
0.2 2.3 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.2 1.9 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.2 3.5 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.2 1.2 GO:0051003 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.2 2.9 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.2 0.6 GO:0019776 Atg8 ligase activity(GO:0019776)
0.2 1.0 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.2 1.4 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.2 2.2 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.2 1.0 GO:0036456 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.2 3.2 GO:0031369 translation initiation factor binding(GO:0031369)
0.2 0.8 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.2 0.6 GO:0016504 peptidase activator activity(GO:0016504)
0.2 1.2 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.2 1.9 GO:0035198 miRNA binding(GO:0035198)
0.2 0.6 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.2 2.3 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.2 1.3 GO:0004834 tryptophan synthase activity(GO:0004834)
0.2 2.2 GO:0070300 phosphatidic acid binding(GO:0070300)
0.2 0.6 GO:0004046 aminoacylase activity(GO:0004046)
0.2 0.7 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
0.2 13.6 GO:0003777 microtubule motor activity(GO:0003777)
0.2 0.7 GO:0070034 telomerase RNA binding(GO:0070034)
0.2 0.5 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.2 0.5 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.2 0.9 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.2 1.8 GO:0098847 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.2 3.9 GO:0008327 methyl-CpG binding(GO:0008327)
0.2 2.6 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.2 2.9 GO:0035064 methylated histone binding(GO:0035064)
0.2 9.8 GO:0010857 calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.2 1.5 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.2 1.9 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.2 0.7 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.2 0.8 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.2 0.8 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.2 0.8 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.2 1.3 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.2 1.0 GO:0051765 inositol tetrakisphosphate kinase activity(GO:0051765)
0.2 2.4 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.2 0.5 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.2 0.9 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.2 0.3 GO:0004484 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192) polynucleotide phosphatase activity(GO:0098518)
0.2 0.8 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.2 1.2 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.2 0.8 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.2 0.8 GO:0004594 pantothenate kinase activity(GO:0004594)
0.2 0.9 GO:0051723 protein methylesterase activity(GO:0051723)
0.2 2.0 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.2 0.5 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.2 1.1 GO:0003916 DNA topoisomerase activity(GO:0003916)
0.1 1.2 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.1 3.5 GO:0031386 protein tag(GO:0031386)
0.1 0.7 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.1 1.4 GO:0072349 modified amino acid transmembrane transporter activity(GO:0072349)
0.1 1.0 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 2.5 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.1 1.2 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.1 0.7 GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity(GO:0008893) diphosphoric monoester hydrolase activity(GO:0016794)
0.1 0.7 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 1.9 GO:0016308 phosphatidylinositol phosphate kinase activity(GO:0016307) 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 4.5 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.1 0.8 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.1 1.2 GO:0000339 RNA cap binding(GO:0000339)
0.1 1.2 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 1.6 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.1 0.5 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.1 0.5 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.3 GO:0008309 double-stranded DNA exodeoxyribonuclease activity(GO:0008309)
0.1 0.9 GO:0050551 myrcene synthase activity(GO:0050551)
0.1 7.1 GO:0042393 histone binding(GO:0042393)
0.1 0.9 GO:0043015 gamma-tubulin binding(GO:0043015)
0.1 0.6 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 1.2 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.1 1.7 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.1 1.3 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 1.0 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 1.3 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.1 0.7 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.4 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.1 0.4 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.1 1.1 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.1 0.7 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.1 0.3 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.1 4.9 GO:0003743 translation initiation factor activity(GO:0003743)
0.1 0.6 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.1 0.7 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.1 0.4 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.1 1.5 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.1 0.3 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.1 1.0 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.1 0.3 GO:0047443 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.1 0.5 GO:0022842 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.1 8.1 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.1 0.4 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.1 0.6 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.1 0.3 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 0.3 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.1 0.3 GO:0004424 imidazoleglycerol-phosphate dehydratase activity(GO:0004424)
0.1 0.9 GO:0016635 oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor(GO:0016635)
0.1 0.5 GO:0030267 glyoxylate reductase (NADP) activity(GO:0030267)
0.1 3.5 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.1 8.2 GO:0003724 RNA helicase activity(GO:0003724)
0.1 0.9 GO:0004526 ribonuclease P activity(GO:0004526)
0.1 0.9 GO:0004096 catalase activity(GO:0004096)
0.1 0.3 GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity(GO:0050362) L-tryptophan aminotransferase activity(GO:0070529) L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.1 2.0 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.8 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 3.9 GO:0004707 MAP kinase activity(GO:0004707)
0.1 0.7 GO:0004849 uridine kinase activity(GO:0004849)
0.1 1.2 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 0.4 GO:0033188 sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.1 0.1 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.1 1.4 GO:0004629 phospholipase C activity(GO:0004629)
0.1 1.9 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 1.1 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.1 0.4 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 0.2 GO:0030332 cyclin binding(GO:0030332)
0.1 1.1 GO:0019905 syntaxin binding(GO:0019905)
0.1 4.1 GO:0016278 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.1 0.1 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.1 0.6 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.1 0.4 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 1.7 GO:0015248 sterol transporter activity(GO:0015248)
0.1 1.0 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 0.3 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.1 4.7 GO:0003727 single-stranded RNA binding(GO:0003727)
0.1 0.5 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 1.8 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.9 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.1 1.0 GO:0002020 protease binding(GO:0002020)
0.1 1.3 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 0.3 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216) SUMO transferase activity(GO:0019789)
0.1 0.3 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.1 0.5 GO:0019137 thioglucosidase activity(GO:0019137)
0.1 0.6 GO:0018822 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.1 0.6 GO:0051087 chaperone binding(GO:0051087)
0.1 0.9 GO:0010997 anaphase-promoting complex binding(GO:0010997)
0.1 4.0 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 1.9 GO:0019887 protein kinase regulator activity(GO:0019887)
0.1 0.2 GO:0000215 tRNA 2'-phosphotransferase activity(GO:0000215) 2'-phosphotransferase activity(GO:0008665)
0.1 0.8 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.1 2.4 GO:0016597 amino acid binding(GO:0016597)
0.1 0.2 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.1 2.5 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.1 0.6 GO:0017091 AU-rich element binding(GO:0017091)
0.1 3.4 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 0.7 GO:0043495 protein anchor(GO:0043495)
0.1 0.5 GO:0004567 beta-mannosidase activity(GO:0004567)
0.1 1.1 GO:0000993 RNA polymerase II core binding(GO:0000993) basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099)
0.1 0.3 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.1 1.6 GO:0030276 clathrin binding(GO:0030276)
0.1 3.2 GO:0001871 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.1 0.2 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.1 0.6 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.1 0.9 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 0.1 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.1 0.4 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.1 10.9 GO:0005516 calmodulin binding(GO:0005516)
0.1 0.4 GO:0047780 citrate dehydratase activity(GO:0047780)
0.1 2.1 GO:0016782 transferase activity, transferring sulfur-containing groups(GO:0016782)
0.1 0.2 GO:0001056 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.1 0.5 GO:0000014 single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.1 0.4 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.1 0.3 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.5 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.1 2.5 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.1 0.5 GO:0005536 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 2.4 GO:0031072 heat shock protein binding(GO:0031072)
0.1 0.5 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 0.3 GO:0036002 pre-mRNA binding(GO:0036002)
0.1 0.9 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 8.4 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 0.3 GO:0004765 shikimate kinase activity(GO:0004765)
0.1 0.6 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.1 2.6 GO:0003713 transcription coactivator activity(GO:0003713)
0.1 10.5 GO:0043531 ADP binding(GO:0043531)
0.1 0.3 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.1 0.6 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 0.4 GO:0005047 signal recognition particle binding(GO:0005047)
0.1 0.2 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.1 0.2 GO:0016842 amidine-lyase activity(GO:0016842)
0.1 3.8 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.1 0.8 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.9 GO:0016775 protein histidine kinase activity(GO:0004673) phosphotransferase activity, nitrogenous group as acceptor(GO:0016775)
0.1 0.4 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.1 3.5 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.1 1.5 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.1 0.6 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1 1.7 GO:0016776 phosphotransferase activity, phosphate group as acceptor(GO:0016776)
0.1 4.7 GO:0051015 actin filament binding(GO:0051015)
0.1 0.5 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.1 1.8 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.4 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.1 2.4 GO:0017137 Rab GTPase binding(GO:0017137)
0.1 0.2 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 2.6 GO:0008237 metallopeptidase activity(GO:0008237)
0.1 0.2 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
0.1 0.2 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.1 2.0 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.1 0.6 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.1 4.1 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.7 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.6 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 1.0 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.3 GO:0030151 molybdenum ion binding(GO:0030151)
0.0 7.4 GO:0061630 ubiquitin protein ligase activity(GO:0061630) ubiquitin-like protein ligase activity(GO:0061659)
0.0 2.7 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.2 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.3 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.0 0.3 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 1.9 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 1.7 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.3 GO:0019903 protein phosphatase binding(GO:0019903)
0.0 0.4 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.8 GO:0061733 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.0 0.2 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.0 0.2 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 1.0 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 9.3 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 2.6 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 0.2 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.0 0.7 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 0.2 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.0 0.6 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.2 GO:0019207 kinase regulator activity(GO:0019207)
0.0 1.4 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 8.5 GO:0019787 ubiquitin-like protein transferase activity(GO:0019787)
0.0 0.2 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.0 0.4 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.0 3.6 GO:0005525 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.4 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.0 0.1 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.0 1.2 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.3 GO:0097177 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.0 0.1 GO:0004645 phosphorylase activity(GO:0004645)
0.0 0.7 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.3 GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863)
0.0 0.2 GO:0051139 calcium:proton antiporter activity(GO:0015369) metal ion:proton antiporter activity(GO:0051139)
0.0 17.5 GO:0044822 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.0 0.6 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.1 GO:0004441 inositol-1,4-bisphosphate 1-phosphatase activity(GO:0004441)
0.0 0.1 GO:0034595 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity(GO:0004439) phosphatidylinositol bisphosphate phosphatase activity(GO:0034593) phosphatidylinositol phosphate 5-phosphatase activity(GO:0034595)
0.0 0.6 GO:0008134 transcription factor binding(GO:0008134)
0.0 0.1 GO:0032138 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.0 0.8 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.0 0.4 GO:0031418 L-ascorbic acid binding(GO:0031418)
0.0 1.1 GO:0005198 structural molecule activity(GO:0005198)
0.0 0.2 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.1 GO:0004788 thiamine diphosphokinase activity(GO:0004788) thiamine binding(GO:0030975)
0.0 0.7 GO:0080044 quercetin 7-O-glucosyltransferase activity(GO:0080044)
0.0 0.1 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.0 0.2 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.2 GO:0008312 7S RNA binding(GO:0008312)
0.0 0.2 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.6 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.0 25.2 GO:0001071 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0 0.0 GO:0010011 auxin binding(GO:0010011)
0.0 0.0 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.0 1.0 GO:0030170 pyridoxal phosphate binding(GO:0030170)
0.0 0.2 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.4 GO:0010181 FMN binding(GO:0010181)
0.0 0.9 GO:0003924 GTPase activity(GO:0003924)
0.0 0.1 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.0 0.1 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.5 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.1 GO:0005351 sugar:proton symporter activity(GO:0005351) cation:sugar symporter activity(GO:0005402)
0.0 0.2 GO:0000049 tRNA binding(GO:0000049)
0.0 0.2 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.1 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.0 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.0 0.3 GO:0008810 cellulase activity(GO:0008810)
0.0 0.1 GO:0008641 small protein activating enzyme activity(GO:0008641)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.5 PID TCR JNK PATHWAY JNK signaling in the CD4+ TCR pathway
0.8 4.1 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.7 2.1 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.7 2.1 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.7 2.0 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.5 0.9 PID TRKR PATHWAY Neurotrophic factor-mediated Trk receptor signaling
0.4 2.2 PID S1P S1P1 PATHWAY S1P1 pathway
0.4 1.3 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.3 0.7 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.3 1.1 ST DIFFERENTIATION PATHWAY IN PC12 CELLS Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway.
0.2 1.5 PID PLK1 PATHWAY PLK1 signaling events
0.2 0.7 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.2 1.9 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.2 1.7 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.1 0.7 PID BARD1 PATHWAY BARD1 signaling events
0.1 0.6 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.4 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.5 REACTOME ARMS MEDIATED ACTIVATION Genes involved in ARMS-mediated activation
0.8 3.2 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.8 2.3 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.8 2.3 REACTOME APOPTOTIC EXECUTION PHASE Genes involved in Apoptotic execution phase
0.7 2.1 REACTOME INWARDLY RECTIFYING K CHANNELS Genes involved in Inwardly rectifying K+ channels
0.7 3.3 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
0.5 2.5 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.5 0.9 REACTOME FRS2 MEDIATED CASCADE Genes involved in FRS2-mediated cascade
0.4 1.3 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.4 1.3 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.4 1.2 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.4 1.5 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.3 0.7 REACTOME CIRCADIAN CLOCK Genes involved in Circadian Clock
0.3 1.0 REACTOME SIGNALING BY INSULIN RECEPTOR Genes involved in Signaling by Insulin receptor
0.3 1.2 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.3 4.1 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism
0.3 0.9 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.3 0.8 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.2 0.7 REACTOME APOPTOSIS Genes involved in Apoptosis
0.2 0.9 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.2 0.2 REACTOME IL1 SIGNALING Genes involved in Interleukin-1 signaling
0.2 0.9 REACTOME RECYCLING OF BILE ACIDS AND SALTS Genes involved in Recycling of bile acids and salts
0.1 0.6 REACTOME RESOLUTION OF AP SITES VIA THE MULTIPLE NUCLEOTIDE PATCH REPLACEMENT PATHWAY Genes involved in Resolution of AP sites via the multiple-nucleotide patch replacement pathway
0.1 1.6 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins
0.1 1.0 REACTOME ORC1 REMOVAL FROM CHROMATIN Genes involved in Orc1 removal from chromatin
0.1 1.6 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.1 0.9 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.0 0.2 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.0 0.0 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor