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GSE130291:vernalization in Arabidopsis thaliana
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Results for AT1G47655
Z-value: 0.70
Transcription factors associated with AT1G47655
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
AT1G47655
|
AT1G47655 | Dof-type zinc finger DNA-binding family protein |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| AT1G47655 | arTal_v1_Chr1_+_17525342_17525342 | 0.10 | 7.3e-01 | Click! |
Activity profile of AT1G47655 motif
Sorted Z-values of AT1G47655 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| Chr3_-_3420932 | 1.12 |
AT3G10930.1
|
AT3G10930
|
hypothetical protein |
| Chr1_-_9649323 | 0.99 |
AT1G27730.1
|
STZ
|
salt tolerance zinc finger |
| Chr5_-_216773 | 0.94 |
AT5G01550.1
|
LECRKA4.2
|
lectin receptor kinase a4.1 |
| Chr5_+_4488476 | 0.90 |
AT5G13930.1
|
TT4
|
Chalcone and stilbene synthase family protein |
| Chr3_+_18465318 | 0.75 |
AT3G49780.1
|
PSK4
|
phytosulfokine 4 precursor |
| Chr5_+_18905258 | 0.71 |
AT5G46590.1
AT5G46590.2 |
NAC096
|
NAC domain containing protein 96 |
| Chr2_-_16359943 | 0.70 |
AT2G39200.1
|
MLO12
|
Seven transmembrane MLO family protein |
| Chr5_-_18371021 | 0.69 |
AT5G45340.2
AT5G45340.1 |
CYP707A3
|
cytochrome P450, family 707, subfamily A, polypeptide 3 |
| Chr1_-_1702749 | 0.68 |
AT1G05675.1
|
AT1G05675
|
UDP-Glycosyltransferase superfamily protein |
| Chr5_-_8186662 | 0.68 |
AT5G24160.2
AT5G24160.1 |
SQE6
|
squalene monooxygenase 6 |
| Chr4_+_16810482 | 0.63 |
AT4G35350.2
AT4G35350.1 |
XCP1
|
xylem cysteine peptidase 1 |
| Chr5_-_23992908 | 0.63 |
AT5G59520.1
|
ZIP2
|
ZRT/IRT-like protein 2 |
| Chr3_+_5187082 | 0.62 |
AT3G15357.1
|
AT3G15357
|
phosphopantothenoylcysteine decarboxylase subunit |
| Chr4_-_11585391 | 0.62 |
AT4G21830.2
|
MSRB7
|
methionine sulfoxide reductase B7 |
| Chr4_-_11585542 | 0.61 |
AT4G21830.1
|
MSRB7
|
methionine sulfoxide reductase B7 |
| Chr1_-_25065446 | 0.58 |
AT1G67110.1
AT1G67110.2 |
CYP735A2
|
cytochrome P450, family 735, subfamily A, polypeptide 2 |
| Chr1_-_3233109 | 0.54 |
AT1G09932.2
AT1G09932.4 AT1G09932.3 AT1G09932.1 |
AT1G09932
|
Phosphoglycerate mutase family protein |
| Chr2_-_13609955 | 0.53 |
AT2G31980.1
|
CYS2
|
PHYTOCYSTATIN 2 |
| Chr5_-_8186100 | 0.52 |
AT5G24160.3
|
SQE6
|
squalene monooxygenase 6 |
| Chr3_-_20718866 | 0.50 |
AT3G55840.1
|
AT3G55840
|
Hs1pro-1 protein |
| Chr5_+_15141650 | 0.50 |
AT5G38000.1
AT5G38000.2 AT5G38000.3 |
AT5G38000
|
Zinc-binding dehydrogenase family protein |
| Chr5_-_8181107 | 0.48 |
AT5G24155.2
AT5G24155.3 AT5G24155.1 |
AT5G24155
|
FAD/NAD(P)-binding oxidoreductase family protein |
| Chr5_-_4573137 | 0.46 |
AT5G14180.4
AT5G14180.2 |
MPL1
|
Myzus persicae-induced lipase 1 |
| Chr5_-_4574541 | 0.45 |
AT5G14180.3
AT5G14180.5 AT5G14180.1 |
MPL1
|
Myzus persicae-induced lipase 1 |
| Chr1_+_7696427 | 0.44 |
AT1G21910.1
|
DREB26
|
Integrase-type DNA-binding superfamily protein |
| Chr2_+_1568279 | 0.43 |
AT2G04500.1
|
AT2G04500
|
Cysteine/Histidine-rich C1 domain family protein |
| Chr1_+_20604892 | 0.42 |
AT1G55240.1
|
AT1G55240
|
proteinase inhibitor I4, serpin (DUF716) |
| Chr2_-_11754028 | 0.41 |
AT2G27500.2
AT2G27500.1 |
AT2G27500
|
Glycosyl hydrolase superfamily protein |
| Chr5_+_5095652 | 0.41 |
AT5G15660.1
|
AT5G15660
|
F-box and associated interaction domains-containing protein |
| Chr4_-_9393650 | 0.40 |
AT4G16690.1
|
MES16
|
methyl esterase 16 |
| Chr2_+_14003128 | 0.39 |
AT2G32990.1
|
GH9B8
|
glycosyl hydrolase 9B8 |
| Chr2_-_11753767 | 0.38 |
AT2G27500.3
|
AT2G27500
|
Glycosyl hydrolase superfamily protein |
| Chr2_-_10124636 | 0.38 |
AT2G23780.1
AT2G23780.3 AT2G23780.2 |
AT2G23780
|
RING/U-box superfamily protein |
| Chr1_-_2160818 | 0.37 |
AT1G07030.1
|
AT1G07030
|
Mitochondrial substrate carrier family protein |
| Chr5_+_20820068 | 0.37 |
AT5G51210.1
|
OLEO3
|
oleosin3 |
| Chr3_-_12366047 | 0.37 |
AT3G30737.1
|
AT3G30737
|
|
| Chr5_-_1278102 | 0.37 |
AT5G04480.1
|
AT5G04480
|
UDP-Glycosyltransferase superfamily protein |
| Chr4_-_1539987 | 0.36 |
AT4G03460.2
|
AT4G03460
|
Ankyrin repeat family protein |
| Chr5_-_1277946 | 0.36 |
AT5G04480.2
|
AT5G04480
|
UDP-Glycosyltransferase superfamily protein |
| Chr5_+_22594617 | 0.35 |
AT5G55830.1
|
AT5G55830
|
Concanavalin A-like lectin protein kinase family protein |
| Chr2_-_7594195 | 0.35 |
AT2G17480.1
|
MLO8
|
Seven transmembrane MLO family protein |
| Chr2_+_10072057 | 0.34 |
AT2G23690.1
|
AT2G23690
|
HTH-type transcriptional regulator |
| Chr3_+_15993259 | 0.33 |
AT3G44320.1
|
NIT3
|
nitrilase 3 |
| Chr4_-_1540713 | 0.33 |
AT4G03460.1
|
AT4G03460
|
Ankyrin repeat family protein |
| Chr4_+_18029196 | 0.33 |
AT4G38560.1
AT4G38560.2 |
AT4G38560
|
phospholipase-like protein (PEARLI 4) family protein |
| Chr2_+_6880825 | 0.33 |
AT2G15800.1
|
AT2G15800
|
|
| Chr3_+_4988008 | 0.32 |
AT3G14840.2
AT3G14840.1 |
AT3G14840
|
Leucine-rich repeat transmembrane protein kinase |
| Chr2_+_12594536 | 0.32 |
AT2G29330.1
|
TRI
|
tropinone reductase |
| Chr1_-_20728091 | 0.31 |
AT1G55520.1
AT1G55520.3 AT1G55520.2 AT1G55520.4 |
TBP2
|
TATA binding protein 2 |
| Chr4_-_8175759 | 0.31 |
AT4G14165.1
|
AT4G14165
|
F-box family protein-like protein |
| Chr4_+_7962428 | 0.31 |
AT4G13710.1
AT4G13710.2 |
AT4G13710
|
Pectin lyase-like superfamily protein |
| Chr1_-_6342460 | 0.31 |
AT1G18410.1
AT1G18410.4 |
AT1G18410
|
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| Chr3_-_892213 | 0.31 |
AT3G03660.1
AT3G03660.3 AT3G03660.2 AT3G03660.4 |
WOX11
|
WUSCHEL related homeobox 11 |
| Chr4_+_17718118 | 0.31 |
AT4G37710.1
AT4G37710.2 |
AT4G37710
|
VQ motif-containing protein |
| Chr5_-_17435405 | 0.30 |
AT5G43410.1
|
AT5G43410
|
Integrase-type DNA-binding superfamily protein |
| Chr1_-_6341257 | 0.30 |
AT1G18410.5
AT1G18410.3 |
AT1G18410
|
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| Chr1_+_11188120 | 0.30 |
AT1G31290.2
AT1G31290.3 AT1G31290.1 |
AGO3
|
ARGONAUTE 3 |
| Chr1_-_8382290 | 0.30 |
AT1G23700.1
|
AT1G23700
|
Protein kinase superfamily protein |
| Chr1_-_6341838 | 0.30 |
AT1G18410.2
|
AT1G18410
|
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| Chr1_+_11607854 | 0.29 |
AT1G32220.1
|
AT1G32220
|
NAD(P)-binding Rossmann-fold superfamily protein |
| Chr1_-_8381965 | 0.29 |
AT1G23700.3
AT1G23700.2 |
AT1G23700
|
Protein kinase superfamily protein |
| Chr5_-_19404147 | 0.29 |
AT5G47920.1
|
AT5G47920
|
transcription elongation factor |
| Chr5_+_1949315 | 0.29 |
AT5G06380.1
|
AT5G06380
|
hypothetical protein |
| Chr4_+_6391854 | 0.29 |
AT4G10310.1
|
HKT1
|
high-affinity K+ transporter 1 |
| Chr1_+_22847247 | 0.29 |
AT1G61840.1
|
AT1G61840
|
Cysteine/Histidine-rich C1 domain family protein |
| Chr2_+_17409370 | 0.28 |
AT2G41730.1
|
AT2G41730
|
calcium-binding site protein |
| Chr1_+_7439171 | 0.28 |
AT1G21250.1
|
WAK1
|
cell wall-associated kinase |
| Chr3_-_15355494 | 0.28 |
AT3G43430.1
|
AT3G43430
|
RING/U-box superfamily protein |
| Chr5_-_22560461 | 0.28 |
AT5G55730.2
AT5G55730.1 |
FLA1
|
FASCICLIN-like arabinogalactan 1 |
| Chr4_+_9042897 | 0.28 |
AT4G15953.1
|
AT4G15953
|
maternally expressed family protein |
| Chr1_+_9492849 | 0.27 |
AT1G27330.1
|
AT1G27330
|
Ribosome associated membrane protein RAMP4 |
| Chr3_+_10831162 | 0.27 |
AT3G28830.1
|
AT3G28830
|
mucin-like protein, putative (DUF1216) |
| Chr1_-_2671825 | 0.27 |
AT1G08450.2
AT1G08450.3 AT1G08450.1 |
CRT3
|
calreticulin 3 |
| Chr2_-_10835483 | 0.27 |
AT2G25460.1
|
AT2G25460
|
EEIG1/EHBP1 protein amino-terminal domain protein |
| Chr3_-_6313319 | 0.26 |
AT3G18380.3
AT3G18380.1 AT3G18380.2 |
SHH2
|
DNA-BINDING TRANSCRIPTION FACTOR 2 |
| Chr2_-_10835660 | 0.26 |
AT2G25460.2
|
AT2G25460
|
EEIG1/EHBP1 protein amino-terminal domain protein |
| Chr2_-_9418711 | 0.26 |
AT2G22140.2
AT2G22140.1 |
EME1B
|
essential meiotic endonuclease 1B |
| Chr4_-_1298500 | 0.26 |
AT4G02930.1
|
AT4G02930
|
GTP binding Elongation factor Tu family protein |
| Chr5_-_4587427 | 0.26 |
AT5G14220.1
AT5G14220.5 AT5G14220.2 |
HEMG2
|
Flavin containing amine oxidoreductase family |
| Chr5_-_4587653 | 0.26 |
AT5G14220.4
AT5G14220.3 |
HEMG2
|
Flavin containing amine oxidoreductase family |
| Chr1_-_1307973 | 0.25 |
AT1G04680.1
|
AT1G04680
|
Pectin lyase-like superfamily protein |
| Chr3_-_15098851 | 0.25 |
AT3G43123.1
|
AT3G43123
|
|
| Chr1_-_6293871 | 0.25 |
AT1G18270.4
AT1G18270.2 AT1G18270.3 AT1G18270.1 |
AT1G18270
|
ketose-bisphosphate aldolase class-II family protein |
| Chr1_-_22641999 | 0.25 |
AT1G61360.4
AT1G61360.3 |
AT1G61360
|
S-locus lectin protein kinase family protein |
| Chr5_+_19711738 | 0.25 |
AT5G48610.4
|
AT5G48610
|
myb-like protein X |
| Chr4_-_6992555 | 0.25 |
AT4G11540.1
|
AT4G11540
|
Cysteine/Histidine-rich C1 domain family protein |
| Chr3_+_7368267 | 0.25 |
AT3G21020.1
|
AT3G21020
|
|
| Chr3_+_21893812 | 0.25 |
AT3G59220.1
|
PRN
|
pirin |
| Chr5_+_3542139 | 0.25 |
AT5G11130.1
|
AT5G11130
|
Exostosin family protein |
| Chr2_+_19599948 | 0.24 |
AT2G47860.3
|
SETH6
|
Phototropic-responsive NPH3 family protein |
| Chr2_+_4509242 | 0.24 |
AT2G11330.1
|
AT2G11330
|
|
| Chr1_-_8349786 | 0.24 |
AT1G23540.1
|
PERK12
|
Protein kinase superfamily protein |
| Chr2_+_10391075 | 0.24 |
AT2G24440.1
|
AT2G24440
|
selenium binding protein |
| Chr5_+_19712035 | 0.24 |
AT5G48610.5
|
AT5G48610
|
myb-like protein X |
| Chr2_-_4645638 | 0.24 |
AT2G11600.1
|
AT2G11600
|
|
| Chr2_+_7782712 | 0.24 |
AT2G17920.1
|
AT2G17920
|
nucleic acid binding / zinc ion binding protein |
| Chr1_-_22641111 | 0.24 |
AT1G61360.1
|
AT1G61360
|
S-locus lectin protein kinase family protein |
| Chr5_+_15176231 | 0.24 |
AT5G38035.1
|
AT5G38035
|
|
| Chr2_+_15379660 | 0.23 |
AT2G36690.1
|
AT2G36690
|
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| Chr2_+_13252076 | 0.23 |
AT2G31083.2
AT2G31083.1 |
CLE5
|
CLAVATA3/ESR-RELATED 5 |
| Chr1_-_359078 | 0.23 |
AT1G02040.1
|
AT1G02040
|
C2H2-type zinc finger family protein |
| Chr1_-_8350068 | 0.23 |
AT1G23540.2
|
PERK12
|
Protein kinase superfamily protein |
| Chr5_+_25218634 | 0.23 |
AT5G62800.1
AT5G62800.2 |
AT5G62800
|
Protein with RING/U-box and TRAF-like domain |
| Chr4_+_4972738 | 0.23 |
AT4G08090.1
|
AT4G08090
|
|
| Chr5_+_3524677 | 0.23 |
AT5G11090.1
|
AT5G11090
|
serine-rich protein-like protein |
| Chr2_+_15379846 | 0.23 |
AT2G36690.2
|
AT2G36690
|
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| Chr2_+_2369630 | 0.22 |
AT2G06080.1
|
AT2G06080
|
|
| Chr1_+_17212570 | 0.22 |
AT1G46192.1
|
AT1G46192
|
|
| Chr2_+_6484338 | 0.22 |
AT2G15010.1
|
AT2G15010
|
Plant thionin |
| Chr1_-_22641825 | 0.22 |
AT1G61360.2
|
AT1G61360
|
S-locus lectin protein kinase family protein |
| Chr1_+_5920757 | 0.22 |
AT1G17285.1
|
AT1G17285
|
transmembrane protein |
| Chr2_+_2297816 | 0.22 |
AT2G05950.1
|
AT2G05950
|
|
| Chr5_-_17909507 | 0.22 |
AT5G44430.1
|
PDF1.2c
|
plant defensin 1.2C |
| Chr5_-_24807898 | 0.22 |
AT5G61730.1
AT5G61730.2 |
ABCA9
|
ABC2 homolog 11 |
| Chr5_+_24035650 | 0.22 |
AT5G59660.2
AT5G59660.1 AT5G59660.3 |
AT5G59660
|
Leucine-rich repeat protein kinase family protein |
| Chr4_+_13236448 | 0.22 |
AT4G26120.1
|
AT4G26120
|
Ankyrin repeat family protein / BTB/POZ domain-containing protein |
| Chr2_-_17419423 | 0.22 |
AT2G41745.1
|
AT2G41745
|
|
| Chr4_-_7523979 | 0.22 |
AT4G12810.1
|
AT4G12810
|
F-box family protein |
| Chr3_-_2306615 | 0.22 |
AT3G07250.1
|
AT3G07250
|
RNA-binding (RRM-RBD-RNP motif) domain nuclear transport factor 2 family protein |
| Chr2_-_3165509 | 0.22 |
AT2G07550.1
|
AT2G07550
|
|
| Chr4_-_16583075 | 0.21 |
AT4G34760.1
|
AT4G34760
|
SAUR-like auxin-responsive protein family |
| Chr1_-_22117018 | 0.21 |
AT1G60030.1
|
NAT7
|
nucleobase-ascorbate transporter 7 |
| Chr2_-_1462937 | 0.21 |
AT2G04240.2
AT2G04240.1 |
XERICO
|
RING/U-box superfamily protein |
| Chr5_+_10050551 | 0.21 |
AT5G28053.1
|
AT5G28053
|
|
| Chr1_-_19398244 | 0.21 |
AT1G52120.1
|
AT1G52120
|
Mannose-binding lectin superfamily protein |
| Chr1_-_19397975 | 0.21 |
AT1G52120.2
|
AT1G52120
|
Mannose-binding lectin superfamily protein |
| Chr4_+_8883825 | 0.21 |
AT4G15560.1
|
CLA1
|
Deoxyxylulose-5-phosphate synthase |
| Chr1_-_1043887 | 0.21 |
AT1G04040.1
|
AT1G04040
|
HAD superfamily, subfamily IIIB acid phosphatase |
| Chr4_-_6520317 | 0.21 |
AT4G10550.4
AT4G10550.3 AT4G10550.2 |
AT4G10550
|
Subtilase family protein |
| Chr5_+_6340076 | 0.21 |
AT5G18990.1
|
AT5G18990
|
Pectin lyase-like superfamily protein |
| Chr1_-_22172685 | 0.21 |
AT1G60120.1
|
AT1G60120
|
|
| Chr1_-_7524721 | 0.21 |
AT1G21475.1
|
AT1G21475
|
hypothetical protein (DUF506) |
| Chr5_+_24363933 | 0.21 |
AT5G60610.2
|
AT5G60610
|
F-box/RNI-like superfamily protein |
| Chr5_+_19711541 | 0.20 |
AT5G48610.2
AT5G48610.3 AT5G48610.1 |
AT5G48610
|
myb-like protein X |
| Chr2_+_3902798 | 0.20 |
AT2G10226.1
|
AT2G10226
|
|
| Chr1_+_5920542 | 0.20 |
AT1G17285.2
|
AT1G17285
|
transmembrane protein |
| Chr3_-_1832190 | 0.20 |
AT3G06070.1
|
AT3G06070
|
hypothetical protein |
| Chr5_-_5259924 | 0.20 |
AT5G16100.2
|
AT5G16100
|
RWP-RK domain protein |
| Chr1_-_20983979 | 0.20 |
AT1G56100.1
AT1G56100.3 AT1G56100.2 |
AT1G56100
|
Plant invertase/pectin methylesterase inhibitor superfamily protein |
| Chr5_+_22474142 | 0.20 |
AT5G55480.1
|
SVL1
|
SHV3-like 1 |
| Chr1_+_3252098 | 0.20 |
AT1G09970.1
|
LRR XI-23
|
Leucine-rich receptor-like protein kinase family protein |
| Chr1_-_25100625 | 0.20 |
AT1G67130.1
|
AT1G67130
|
F-box family protein |
| Chr1_+_3252317 | 0.20 |
AT1G09970.2
|
LRR XI-23
|
Leucine-rich receptor-like protein kinase family protein |
| Chr3_-_17700923 | 0.20 |
AT3G47960.1
|
GTR1
|
Major facilitator superfamily protein |
| Chr4_+_4592806 | 0.20 |
AT4G07770.1
|
AT4G07770
|
|
| Chr2_+_1970709 | 0.20 |
AT2G05390.1
|
AT2G05390
|
|
| Chr5_+_20511642 | 0.20 |
AT5G50375.3
AT5G50375.1 AT5G50375.2 |
CPI1
|
cyclopropyl isomerase |
| Chr1_-_19336072 | 0.20 |
AT1G52000.2
AT1G52000.1 |
AT1G52000
|
Mannose-binding lectin superfamily protein |
| Chr3_+_11956458 | 0.20 |
AT3G30340.2
AT3G30340.1 |
UMAMIT32
|
nodulin MtN21 /EamA-like transporter family protein |
| Chr1_-_18446772 | 0.19 |
AT1G49830.2
AT1G49830.1 |
AT1G49830
|
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| Chr1_-_5155563 | 0.19 |
AT1G14940.1
AT1G14940.2 |
AT1G14940
|
Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| Chr1_-_19599402 | 0.19 |
AT1G52610.1
|
AT1G52610
|
|
| Chr3_-_1785495 | 0.19 |
AT3G05960.1
|
STP6
|
sugar transporter 6 |
| Chr1_+_6962030 | 0.19 |
AT1G20080.2
AT1G20080.3 AT1G20080.4 AT1G20080.1 AT1G20080.5 |
SYTB
|
Calcium-dependent lipid-binding (CaLB domain) family protein |
| Chr1_+_23911024 | 0.19 |
AT1G64390.1
|
GH9C2
|
glycosyl hydrolase 9C2 |
| Chr1_-_23411139 | 0.19 |
AT1G63120.1
|
RBL2
|
RHOMBOID-like 2 |
| Chr5_-_17095801 | 0.19 |
AT5G42645.1
|
AT5G42645
|
|
| Chr2_+_10995095 | 0.19 |
AT2G25780.1
|
AT2G25780
|
hypothetical protein (DUF1677) |
| Chr3_-_15853462 | 0.19 |
AT3G44093.1
|
AT3G44093
|
|
| Chr4_-_17656557 | 0.19 |
AT4G37570.1
|
AT4G37570
|
|
| Chr4_-_4214012 | 0.19 |
AT4G07415.1
|
AT4G07415
|
|
| Chr3_-_1338113 | 0.19 |
AT3G04855.1
|
AT3G04855
|
hypothetical protein |
| Chr5_+_24357021 | 0.19 |
AT5G60590.3
AT5G60590.1 AT5G60590.2 |
AT5G60590
|
DHBP synthase RibB-like alpha/beta domain-containing protein |
| Chr2_-_8352562 | 0.19 |
AT2G19240.2
AT2G19240.1 |
AT2G19240
|
Ypt/Rab-GAP domain of gyp1p superfamily protein |
| Chr4_+_16925301 | 0.19 |
AT4G35710.1
|
AT4G35710
|
DUF241 domain protein, putative (DUF241) |
| Chr2_-_7132803 | 0.19 |
AT2G16450.1
|
AT2G16450
|
F-box and associated interaction domains-containing protein |
| Chr2_+_9572066 | 0.19 |
AT2G22520.1
AT2G22520.2 |
AT2G22520
|
hypothetical protein |
| Chr3_+_14484419 | 0.19 |
AT3G42330.1
|
AT3G42330
|
|
| Chr5_-_5259719 | 0.19 |
AT5G16100.1
|
AT5G16100
|
RWP-RK domain protein |
| Chr3_+_20386597 | 0.19 |
AT3G55010.1
AT3G55010.2 |
PUR5
|
phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) |
| Chr5_-_7144272 | 0.18 |
AT5G21030.1
AT5G21030.2 |
AT5G21030
|
PAZ domain-containing protein / piwi domain-containing protein |
| Chr1_-_24510742 | 0.18 |
AT1G65880.1
|
BZO1
|
benzoyloxyglucosinolate 1 |
| Chr5_+_24363591 | 0.18 |
AT5G60610.1
|
AT5G60610
|
F-box/RNI-like superfamily protein |
| Chr2_+_6447381 | 0.18 |
AT2G14950.1
|
AT2G14950
|
|
| Chr1_+_9105038 | 0.18 |
AT1G26320.2
AT1G26320.1 |
AT1G26320
|
Zinc-binding dehydrogenase family protein |
| Chr2_-_3561620 | 0.18 |
AT2G07791.1
|
AT2G07791
|
|
| Chr2_+_16123985 | 0.18 |
AT2G38510.1
|
AT2G38510
|
MATE efflux family protein |
| Chr1_+_30138818 | 0.18 |
AT1G80120.1
|
AT1G80120
|
LURP-one-like protein (DUF567) |
| Chr2_-_19249909 | 0.18 |
AT2G46840.1
|
DUF4
|
hypothetical protein (DOMAIN OF UNKNOWN FUNCTION 724 4) |
| Chr1_+_26966766 | 0.18 |
AT1G71696.2
AT1G71696.1 |
SOL1
|
carboxypeptidase D |
| Chr1_-_7800228 | 0.18 |
AT1G22100.1
|
AT1G22100
|
Inositol-pentakisphosphate 2-kinase family protein |
| Chr4_-_6519859 | 0.18 |
AT4G10550.1
|
AT4G10550
|
Subtilase family protein |
| Chr3_-_13428501 | 0.18 |
AT3G32902.1
|
AT3G32902
|
|
| Chr1_+_21861282 | 0.18 |
AT1G59520.4
AT1G59520.5 AT1G59520.2 AT1G59520.1 AT1G59520.6 AT1G59520.3 |
CW7
|
CW7 |
| Chr5_+_25908247 | 0.18 |
AT5G64810.1
|
WRKY51
|
WRKY DNA-binding protein 51 |
| Chr1_+_19879405 | 0.18 |
AT1G53300.1
|
TTL1
|
tetratricopetide-repeat thioredoxin-like 1 |
| Chr3_+_16368890 | 0.18 |
AT3G44830.1
|
AT3G44830
|
Lecithin:cholesterol acyltransferase family protein |
| Chr3_+_13874589 | 0.18 |
AT3G33109.1
|
AT3G33109
|
|
| Chr4_+_13236253 | 0.18 |
AT4G26120.2
|
AT4G26120
|
Ankyrin repeat family protein / BTB/POZ domain-containing protein |
| Chr4_+_14123489 | 0.18 |
AT4G28580.1
|
MGT5
|
magnesium transport 5 |
| Chr5_-_2384521 | 0.18 |
AT5G07530.2
AT5G07530.1 AT5G07530.3 |
GRP17
|
glycine rich protein 17 |
| Chr1_-_3296198 | 0.18 |
AT1G10090.1
|
AT1G10090
|
Early-responsive to dehydration stress protein (ERD4) |
| Chr2_+_5694381 | 0.18 |
AT2G13680.1
|
CALS5
|
callose synthase 5 |
| Chr1_+_29549540 | 0.18 |
AT1G78570.1
|
RHM1
|
rhamnose biosynthesis 1 |
| Chr1_+_26612999 | 0.18 |
AT1G70580.3
|
AOAT2
|
alanine-2-oxoglutarate aminotransferase 2 |
| Chr2_-_12504912 | 0.18 |
AT2G29100.1
AT2G29100.2 |
GLR2.9
|
glutamate receptor 2.9 |
| Chr5_+_2530834 | 0.18 |
AT5G07930.3
AT5G07930.1 AT5G07930.2 |
MCT2
|
MEI2 C-terminal RRM only like 2 |
| Chr1_+_6846338 | 0.18 |
AT1G19800.1
AT1G19800.3 AT1G19800.4 AT1G19800.5 AT1G19800.6 AT1G19800.2 |
ABCI14
|
trigalactosyldiacylglycerol 1 |
| Chr3_+_1121950 | 0.18 |
AT3G04250.1
|
AT3G04250
|
F-box associated ubiquitination effector family protein |
| Chr5_+_19155976 | 0.18 |
AT5G47160.1
AT5G47160.2 |
AT5G47160
|
YDG/SRA domain-containing protein |
Network of associatons between targets according to the STRING database.
First level regulatory network of AT1G47655
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 1.0 | GO:0035264 | multicellular organism growth(GO:0035264) |
| 0.1 | 1.4 | GO:0000304 | response to singlet oxygen(GO:0000304) |
| 0.1 | 0.7 | GO:0043290 | sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345) |
| 0.1 | 0.5 | GO:0046218 | tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218) |
| 0.1 | 0.6 | GO:0010623 | programmed cell death involved in cell development(GO:0010623) |
| 0.1 | 0.3 | GO:0052746 | inositol phosphorylation(GO:0052746) |
| 0.1 | 0.6 | GO:0006597 | spermine biosynthetic process(GO:0006597) |
| 0.1 | 0.3 | GO:0010253 | UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478) |
| 0.1 | 0.2 | GO:0046166 | glyceraldehyde-3-phosphate biosynthetic process(GO:0046166) |
| 0.1 | 0.3 | GO:1901004 | ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006) |
| 0.1 | 0.3 | GO:0070550 | establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579) |
| 0.1 | 0.2 | GO:0090207 | regulation of triglyceride metabolic process(GO:0090207) |
| 0.1 | 0.3 | GO:0070125 | mitochondrial translational elongation(GO:0070125) |
| 0.0 | 1.9 | GO:0016126 | sterol biosynthetic process(GO:0016126) |
| 0.0 | 0.3 | GO:0048830 | adventitious root development(GO:0048830) |
| 0.0 | 0.3 | GO:0006522 | alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853) |
| 0.0 | 0.9 | GO:0031540 | regulation of anthocyanin biosynthetic process(GO:0031540) |
| 0.0 | 0.1 | GO:0010113 | negative regulation of systemic acquired resistance(GO:0010113) |
| 0.0 | 0.3 | GO:0051410 | detoxification of nitrogen compound(GO:0051410) |
| 0.0 | 0.2 | GO:0051325 | mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329) |
| 0.0 | 0.3 | GO:0009061 | anaerobic respiration(GO:0009061) |
| 0.0 | 0.1 | GO:1900544 | regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862) |
| 0.0 | 0.1 | GO:0006751 | glutathione catabolic process(GO:0006751) |
| 0.0 | 0.5 | GO:0006782 | protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501) |
| 0.0 | 0.1 | GO:0071280 | cellular response to copper ion(GO:0071280) cellular response to ozone(GO:0071457) |
| 0.0 | 0.2 | GO:0010581 | regulation of starch biosynthetic process(GO:0010581) |
| 0.0 | 0.6 | GO:0071577 | zinc II ion transmembrane transport(GO:0071577) |
| 0.0 | 0.1 | GO:2001295 | malonyl-CoA biosynthetic process(GO:2001295) |
| 0.0 | 0.1 | GO:0046865 | isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865) |
| 0.0 | 0.6 | GO:0002213 | defense response to insect(GO:0002213) |
| 0.0 | 1.0 | GO:0009789 | positive regulation of abscisic acid-activated signaling pathway(GO:0009789) |
| 0.0 | 0.5 | GO:0030968 | endoplasmic reticulum unfolded protein response(GO:0030968) |
| 0.0 | 0.2 | GO:0010244 | response to low fluence blue light stimulus by blue low-fluence system(GO:0010244) |
| 0.0 | 0.6 | GO:0009691 | cytokinin biosynthetic process(GO:0009691) |
| 0.0 | 0.5 | GO:0019915 | lipid storage(GO:0019915) |
| 0.0 | 0.2 | GO:0006450 | regulation of translational fidelity(GO:0006450) |
| 0.0 | 0.1 | GO:0072337 | modified amino acid transport(GO:0072337) |
| 0.0 | 0.2 | GO:0046084 | adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084) |
| 0.0 | 0.2 | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288) |
| 0.0 | 0.5 | GO:0050826 | response to freezing(GO:0050826) |
| 0.0 | 0.1 | GO:0019287 | isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287) |
| 0.0 | 0.1 | GO:0006272 | leading strand elongation(GO:0006272) embryonic root morphogenesis(GO:0010086) |
| 0.0 | 0.2 | GO:0015914 | phospholipid transport(GO:0015914) |
| 0.0 | 0.1 | GO:0035067 | negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757) |
| 0.0 | 0.2 | GO:0010189 | vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360) |
| 0.0 | 0.1 | GO:0032781 | positive regulation of ATPase activity(GO:0032781) |
| 0.0 | 0.1 | GO:0000256 | allantoin catabolic process(GO:0000256) |
| 0.0 | 0.0 | GO:2000693 | positive regulation of seed maturation(GO:2000693) |
| 0.0 | 0.2 | GO:0015693 | magnesium ion transport(GO:0015693) |
| 0.0 | 0.1 | GO:0006446 | regulation of translational initiation(GO:0006446) |
| 0.0 | 0.2 | GO:0052541 | plant-type cell wall cellulose metabolic process(GO:0052541) |
| 0.0 | 0.2 | GO:0006814 | sodium ion transport(GO:0006814) |
| 0.0 | 0.1 | GO:0016123 | xanthophyll biosynthetic process(GO:0016123) |
| 0.0 | 0.8 | GO:0008037 | cell recognition(GO:0008037) recognition of pollen(GO:0048544) |
| 0.0 | 0.1 | GO:0006011 | UDP-glucose metabolic process(GO:0006011) |
| 0.0 | 0.4 | GO:0052542 | defense response by callose deposition(GO:0052542) |
| 0.0 | 0.1 | GO:0080086 | stamen filament development(GO:0080086) |
| 0.0 | 0.0 | GO:0000023 | maltose metabolic process(GO:0000023) |
| 0.0 | 0.1 | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122) |
| 0.0 | 0.3 | GO:0008360 | regulation of cell shape(GO:0008360) |
| 0.0 | 1.0 | GO:0045490 | pectin catabolic process(GO:0045490) |
| 0.0 | 0.2 | GO:0080060 | integument development(GO:0080060) |
| 0.0 | 0.7 | GO:0007018 | microtubule-based movement(GO:0007018) |
| 0.0 | 0.4 | GO:2000022 | regulation of jasmonic acid mediated signaling pathway(GO:2000022) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.3 | GO:0048476 | Holliday junction resolvase complex(GO:0048476) |
| 0.0 | 0.2 | GO:0070505 | pollen coat(GO:0070505) |
| 0.0 | 0.8 | GO:0031012 | extracellular matrix(GO:0031012) |
| 0.0 | 0.3 | GO:0070971 | endoplasmic reticulum exit site(GO:0070971) |
| 0.0 | 0.1 | GO:0008622 | epsilon DNA polymerase complex(GO:0008622) |
| 0.0 | 0.4 | GO:0012511 | monolayer-surrounded lipid storage body(GO:0012511) |
| 0.0 | 0.3 | GO:1902495 | transmembrane transporter complex(GO:1902495) |
| 0.0 | 1.4 | GO:0005615 | extracellular space(GO:0005615) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 1.7 | GO:0004506 | squalene monooxygenase activity(GO:0004506) |
| 0.1 | 0.7 | GO:0010295 | (+)-abscisic acid 8'-hydroxylase activity(GO:0010295) |
| 0.1 | 0.5 | GO:0070818 | oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818) |
| 0.1 | 1.2 | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity(GO:0008113) |
| 0.1 | 0.6 | GO:0016768 | spermine synthase activity(GO:0016768) |
| 0.1 | 0.9 | GO:0004806 | triglyceride lipase activity(GO:0004806) |
| 0.1 | 0.2 | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661) |
| 0.1 | 0.2 | GO:0004807 | triose-phosphate isomerase activity(GO:0004807) |
| 0.1 | 0.2 | GO:0046027 | phospholipid:diacylglycerol acyltransferase activity(GO:0046027) |
| 0.1 | 0.2 | GO:0010280 | UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377) |
| 0.1 | 0.3 | GO:0047958 | glycine:2-oxoglutarate aminotransferase activity(GO:0047958) |
| 0.1 | 0.7 | GO:0032440 | 2-alkenal reductase [NAD(P)] activity(GO:0032440) |
| 0.1 | 0.3 | GO:0080109 | indole-3-acetonitrile nitrile hydratase activity(GO:0080109) |
| 0.1 | 0.2 | GO:0004134 | 4-alpha-glucanotransferase activity(GO:0004134) |
| 0.0 | 0.4 | GO:0001653 | peptide receptor activity(GO:0001653) |
| 0.0 | 0.1 | GO:0052725 | inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725) |
| 0.0 | 0.2 | GO:0016882 | cyclo-ligase activity(GO:0016882) |
| 0.0 | 0.2 | GO:0004181 | metallocarboxypeptidase activity(GO:0004181) |
| 0.0 | 0.6 | GO:0005375 | copper ion transmembrane transporter activity(GO:0005375) |
| 0.0 | 0.2 | GO:0015245 | fatty acid transporter activity(GO:0015245) |
| 0.0 | 0.8 | GO:0042973 | glucan endo-1,3-beta-D-glucosidase activity(GO:0042973) |
| 0.0 | 0.1 | GO:0010291 | carotene beta-ring hydroxylase activity(GO:0010291) |
| 0.0 | 0.1 | GO:0004618 | phosphoglycerate kinase activity(GO:0004618) |
| 0.0 | 0.1 | GO:0004075 | biotin carboxylase activity(GO:0004075) |
| 0.0 | 0.7 | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570) |
| 0.0 | 0.1 | GO:0070042 | rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042) |
| 0.0 | 0.1 | GO:0008297 | single-stranded DNA exodeoxyribonuclease activity(GO:0008297) |
| 0.0 | 0.2 | GO:0008083 | growth factor activity(GO:0008083) |
| 0.0 | 0.6 | GO:0008810 | cellulase activity(GO:0008810) |
| 0.0 | 0.3 | GO:0017025 | TBP-class protein binding(GO:0017025) |
| 0.0 | 0.1 | GO:0004347 | glucose-6-phosphate isomerase activity(GO:0004347) |
| 0.0 | 0.4 | GO:0080031 | methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032) |
| 0.0 | 0.1 | GO:0008121 | ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681) |
| 0.0 | 0.4 | GO:0003954 | NADH dehydrogenase activity(GO:0003954) |
| 0.0 | 0.1 | GO:0001671 | ATPase activator activity(GO:0001671) |
| 0.0 | 0.2 | GO:0016872 | intramolecular lyase activity(GO:0016872) |
| 0.0 | 0.3 | GO:0003746 | translation elongation factor activity(GO:0003746) |
| 0.0 | 0.3 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
| 0.0 | 0.2 | GO:0008889 | glycerophosphodiester phosphodiesterase activity(GO:0008889) |
| 0.0 | 0.1 | GO:0003977 | UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977) |
| 0.0 | 0.1 | GO:0000095 | S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185) |
| 0.0 | 0.2 | GO:0070180 | large ribosomal subunit rRNA binding(GO:0070180) |
| 0.0 | 0.2 | GO:0015095 | magnesium ion transmembrane transporter activity(GO:0015095) |
| 0.0 | 0.2 | GO:0008195 | phosphatidate phosphatase activity(GO:0008195) |
| 0.0 | 0.1 | GO:0003917 | DNA topoisomerase type I activity(GO:0003917) |
| 0.0 | 0.2 | GO:0015145 | monosaccharide transmembrane transporter activity(GO:0015145) |
| 0.0 | 0.2 | GO:0003725 | double-stranded RNA binding(GO:0003725) |
| 0.0 | 0.7 | GO:0003777 | microtubule motor activity(GO:0003777) |
| 0.0 | 0.1 | GO:0004144 | diacylglycerol O-acyltransferase activity(GO:0004144) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
| 0.0 | 0.1 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
| 0.0 | 0.1 | SA G1 AND S PHASES | Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition. |
| 0.0 | 0.2 | PID E2F PATHWAY | E2F transcription factor network |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE | Genes involved in Synthesis of PIPs at the Golgi membrane |
| 0.0 | 0.1 | REACTOME NUCLEAR SIGNALING BY ERBB4 | Genes involved in Nuclear signaling by ERBB4 |
| 0.0 | 0.2 | REACTOME G1 PHASE | Genes involved in G1 Phase |
| 0.0 | 0.1 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |
| 0.0 | 0.1 | REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Dopamine Neurotransmitter Release Cycle |
| 0.0 | 0.2 | REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS | Genes involved in ABCA transporters in lipid homeostasis |