Project

GSE130291:vernalization in Arabidopsis thaliana

Navigation
Downloads

Results for AT1G35460

Z-value: 1.94

Transcription factors associated with AT1G35460

Gene Symbol Gene ID Gene Info
AT1G35460
AT1G35460 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
FBH1arTal_v1_Chr1_+_13039660_130396600.507.1e-02Click!

Activity profile of AT1G35460 motif

Sorted Z-values of AT1G35460 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_-_21085245 1.35 AT3G56970.1
bHLH38
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_-_7494234 1.14 AT4G12735.1
AT4G12735
hypothetical protein
Chr5_+_630748 1.14 AT5G02780.1
AT5G02780.3
AT5G02780.2
GSTL1
glutathione transferase lambda 1
Chr5_+_22075277 1.08 AT5G54370.1
AT5G54370
Late embryogenesis abundant (LEA) protein-like protein
Chr2_-_12277417 0.99 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
Chr3_-_5175523 0.96 AT3G15356.1
AT3G15356
Legume lectin family protein
Chr2_-_12277245 0.94 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
Chr5_+_23187840 0.91 AT5G57220.1
CYP81F2
cytochrome P450, family 81, subfamily F, polypeptide 2
Chr1_-_20019835 0.90 AT1G53635.1
AT1G53635
hypothetical protein
Chr5_-_8154710 0.89 AT5G24110.1
WRKY30
WRKY DNA-binding protein 30
Chr5_+_18791575 0.89 AT5G46330.1
AT5G46330.2
FLS2
Leucine-rich receptor-like protein kinase family protein
Chr5_-_22232949 0.88 AT5G54720.1
AT5G54720
Ankyrin repeat family protein
Chr3_+_8436436 0.85 AT3G23530.1
AT3G23530
Cyclopropane-fatty-acyl-phospholipid synthase
Chr4_+_7434199 0.84 AT4G12545.1
AT4G12545
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_24257216 0.83 AT1G65310.1
XTH17
xyloglucan endotransglucosylase/hydrolase 17
Chr1_+_24257054 0.82 AT1G65310.2
XTH17
xyloglucan endotransglucosylase/hydrolase 17
Chr3_-_68665 0.82 AT3G01190.1
AT3G01190
Peroxidase superfamily protein
Chr3_+_9396272 0.81 AT3G25730.1
EDF3
ethylene response DNA binding factor 3
Chr1_+_24292372 0.77 AT1G65390.1
AT1G65390.3
AT1G65390.2
PP2-A5
phloem protein 2 A5
Chr4_-_12337599 0.77 AT4G23680.1
AT4G23680
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr4_-_17828180 0.77 AT4G37910.1
AT4G37910.2
mtHsc70-1
mitochondrial heat shock protein 70-1
Chr3_-_16487349 0.76 AT3G45070.1
AT3G45070.3
AT3G45070.2
AT3G45070
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_5681380 0.76 AT3G16670.1
AT3G16670
Pollen Ole e 1 allergen and extensin family protein
Chr5_-_18429090 0.75 AT5G45480.1
AT5G45480
transmembrane protein, putative (DUF594)
Chr1_+_25508639 0.75 AT1G68050.1
FKF1
flavin-binding, kelch repeat, f box 1
Chr1_-_5236886 0.74 AT1G15210.1
ABCG35
pleiotropic drug resistance 7
Chr2_-_16493343 0.74 AT2G39510.1
UMAMIT14
nodulin MtN21 /EamA-like transporter family protein
Chr3_-_9375671 0.74 AT3G25717.1
RTFL16
ROTUNDIFOLIA like 16
Chr5_+_25016860 0.73 AT5G62280.1
AT5G62280
DUF1442 family protein (DUF1442)
Chr1_+_7252111 0.73 AT1G20850.1
XCP2
xylem cysteine peptidase 2
Chr1_+_29135904 0.73 AT1G77530.1
AT1G77530.2
AT1G77530
O-methyltransferase family protein
Chr5_-_25343369 0.73 AT5G63180.1
AT5G63180
Pectin lyase-like superfamily protein
Chr1_+_27241696 0.72 AT1G72360.2
AT1G72360.3
AT1G72360.1
ERF73
Integrase-type DNA-binding superfamily protein
Chr2_+_17137829 0.71 AT2G41100.4
AT2G41100.7
TCH3
Calcium-binding EF hand family protein
Chr3_+_19825267 0.71 AT3G53480.1
ABCG37
pleiotropic drug resistance 9
Chr2_+_17138065 0.71 AT2G41100.1
TCH3
Calcium-binding EF hand family protein
Chr2_+_17137427 0.70 AT2G41100.5
AT2G41100.6
TCH3
Calcium-binding EF hand family protein
Chr2_+_17138330 0.70 AT2G41100.2
TCH3
Calcium-binding EF hand family protein
Chr5_-_24552855 0.70 AT5G61000.1
RPA70D
Replication factor-A protein 1-like protein
Chr5_-_23343415 0.70 AT5G57630.2
AT5G57630.1
CIPK21
CBL-interacting protein kinase 21
Chr4_+_700566 0.69 AT4G01630.1
EXPA17
expansin A17
Chr2_-_15560755 0.69 AT2G37040.1
PAL1
PHE ammonia lyase 1
Chr3_-_23261927 0.69 AT3G62930.1
AT3G62930
Thioredoxin superfamily protein
Chr4_+_11856743 0.68 AT4G22517.1
AT4G22517
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_6692566 0.68 AT1G19360.2
AT1G19360.1
RRA3
Nucleotide-diphospho-sugar transferase family protein
Chr5_+_7861737 0.68 AT5G23360.1
AT5G23360
GRAM domain-containing protein / ABA-responsive protein-like protein
Chr1_+_933426 0.68 AT1G03740.2
AT1G03740.1
AT1G03740
Protein kinase superfamily protein
Chr5_-_23342898 0.67 AT5G57630.3
CIPK21
CBL-interacting protein kinase 21
Chr2_-_16451878 0.67 AT2G39390.1
AT2G39390
Ribosomal L29 family protein
Chr1_-_1043887 0.67 AT1G04040.1
AT1G04040
HAD superfamily, subfamily IIIB acid phosphatase
Chr2_+_17137037 0.66 AT2G41100.3
TCH3
Calcium-binding EF hand family protein
Chr1_+_8400056 0.65 AT1G23750.1
AT1G23750.2
AT1G23750
Nucleic acid-binding, OB-fold-like protein
Chr5_-_24083528 0.65 AT5G59780.2
AT5G59780.1
AT5G59780.3
MYB59
myb domain protein 59
Chr3_+_20981316 0.64 AT3G56640.1
SEC15A
exocyst complex component sec15A
Chr4_+_8107254 0.64 AT4G14060.1
AT4G14060
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr2_+_7964326 0.63 AT2G18328.1
RL4
RAD-like 4
Chr1_-_7565655 0.63 AT1G21580.9
AT1G21580.6
AT1G21580.7
AT1G21580.5
AT1G21580.8
AT1G21580.1
AT1G21580.3
AT1G21580.4
AT1G21580.2
AT1G21580
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr2_+_9293261 0.63 AT2G21790.1
RNR1
ribonucleotide reductase 1
Chr5_+_26266180 0.63 AT5G65690.1
AT5G65690.2
AT5G65690.3
AT5G65690.4
PCK2
phosphoenolpyruvate carboxykinase 2
Chr1_-_29396105 0.62 AT1G78120.1
AT1G78120.2
TPR12
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr4_+_6964398 0.62 AT4G11460.3
AT4G11460.1
CRK30
cysteine-rich RLK (RECEPTOR-like protein kinase) 30
Chr4_-_16046937 0.62 AT4G33270.1
CDC20.1
Transducin family protein / WD-40 repeat family protein
Chr4_-_15347725 0.62 AT4G31700.2
AT4G31700.1
RPS6
ribosomal protein S6
Chr5_+_19456837 0.62 AT5G48010.2
AT5G48010.1
THAS1
thalianol synthase 1
Chr5_+_18444607 0.62 AT5G45510.2
AT5G45510.1
AT5G45510
Leucine-rich repeat (LRR) family protein
Chr2_+_15736727 0.62 AT2G37470.1
AT2G37470
Histone superfamily protein
Chr5_+_25499378 0.62 AT5G63710.1
AT5G63710.2
AT5G63710.3
AT5G63710
Leucine-rich repeat protein kinase family protein
Chr2_+_19605030 0.62 AT2G47880.1
AT2G47880
Glutaredoxin family protein
Chr1_-_29239484 0.62 AT1G77760.1
NIA1
nitrate reductase 1
Chr3_-_1238616 0.61 AT3G04580.1
AT3G04580.2
EIN4
Signal transduction histidine kinase, hybrid-type, ethylene sensor
Chr1_-_10164452 0.61 AT1G29090.1
AT1G29090
Cysteine proteinases superfamily protein
Chr2_-_12173951 0.61 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
Chr3_-_5277991 0.61 AT3G15590.2
AT3G15590.1
AT3G15590
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_-_2843781 0.60 AT3G09260.1
PYK10
Glycosyl hydrolase superfamily protein
Chr1_-_10127098 0.60 AT1G29025.1
AT1G29025
Calcium-binding EF-hand family protein
Chr5_+_1772415 0.60 AT5G05890.1
AT5G05890
UDP-Glycosyltransferase superfamily protein
Chr5_+_6774102 0.59 AT5G20050.1
AT5G20050
Protein kinase superfamily protein
Chr5_+_6894726 0.59 AT5G20400.1
AT5G20400
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_+_5268421 0.59 AT5G16130.1
AT5G16130
Ribosomal protein S7e family protein
Chr5_-_18679191 0.59 AT5G46050.1
PTR3
peptide transporter 3
Chr4_-_7133385 0.59 AT4G11850.1
PLDGAMMA1
phospholipase D gamma 1
Chr1_-_27155793 0.59 AT1G72160.1
AT1G72160
Sec14p-like phosphatidylinositol transfer family protein
Chr1_-_28453820 0.59 AT1G75780.1
TUB1
tubulin beta-1 chain
Chr3_-_23013909 0.59 AT3G62150.2
AT3G62150.1
AT3G62150.3
ABCB21
P-glycoprotein 21
Chr3_-_19747114 0.58 AT3G53260.1
PAL2
phenylalanine ammonia-lyase 2
Chr5_-_25896555 0.58 AT5G64760.2
AT5G64760.3
AT5G64760.1
RPN5B
regulatory particle non-ATPase subunit 5B
Chr1_+_4342209 0.58 AT1G12740.1
AT1G12740.2
AT1G12740.3
AT1G12740.4
CYP87A2
cytochrome P450, family 87, subfamily A, polypeptide 2
Chr1_-_23087141 0.58 AT1G62390.1
Phox2
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
Chr5_-_17272298 0.58 AT5G43060.1
RD21B
Granulin repeat cysteine protease family protein
Chr5_-_23855275 0.58 AT5G59090.2
AT5G59090.3
SBT4.12
subtilase 4.12
Chr5_-_19607147 0.58 AT5G48380.1
BIR1
BAK1-interacting receptor-like kinase 1
Chr2_-_1336550 0.58 AT2G04040.1
DTX1
MATE efflux family protein
Chr3_-_7187521 0.58 AT3G20570.1
ENODL9
early nodulin-like protein 9
Chr2_-_6710856 0.58 AT2G15390.1
FUT4
fucosyltransferase 4
Chr2_+_11401118 0.58 AT2G26760.1
CYCB1%3B4
Cyclin B1;4
Chr2_+_15165213 0.58 AT2G36120.1
DOT1
Glycine-rich protein family
Chr5_+_10856661 0.57 AT5G28830.1
AT5G28830
calcium-binding EF hand family protein
Chr4_-_6260259 0.57 AT4G09990.1
GXM2
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Chr3_+_17115483 0.57 AT3G46490.1
AT3G46490.2
AT3G46490
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_-_11397726 0.57 AT4G21390.1
AT4G21390.2
B120
S-locus lectin protein kinase family protein
Chr1_-_23610653 0.57 AT1G63670.5
AT1G63670.3
AT1G63670.2
TRM12
hypothetical protein (DUF3741)
Chr3_+_1024144 0.57 AT3G03960.1
AT3G03960
TCP-1/cpn60 chaperonin family protein
Chr5_+_9445232 0.56 AT5G26850.2
AT5G26850.4
AT5G26850.1
AT5G26850.3
AT5G26850
Uncharacterized protein
Chr1_-_26279255 0.56 AT1G69810.2
AT1G69810.1
WRKY36
WRKY DNA-binding protein 36
Chr1_+_7645610 0.56 AT1G21750.1
AT1G21750.2
PDIL1-1
PDI-like 1-1
Chr2_+_7074353 0.56 AT2G16365.2
AT2G16365.5
AT2G16365.1
AT2G16365.3
AT2G16365
F-box family protein
Chr5_+_16579936 0.56 AT5G41410.1
BEL1
POX (plant homeobox) family protein
Chr1_-_6378580 0.56 AT1G18540.1
AT1G18540
Ribosomal protein L6 family protein
Chr5_+_25563724 0.56 AT5G63880.2
AT5G63880.1
VPS20.1
SNF7 family protein
Chr3_-_7457393 0.56 AT3G21240.2
AT3G21240.1
AT3G21240.3
4CL2
4-coumarate:CoA ligase 2
Chr1_+_9378404 0.55 AT1G27020.1
AT1G27020
plant/protein
Chr5_+_15901569 0.55 AT5G39730.1
AT5G39730
AIG2-like (avirulence induced gene) family protein
Chr1_-_654457 0.55 AT1G02900.1
RALF1
rapid alkalinization factor 1
Chr2_-_6711156 0.55 AT2G15390.2
FUT4
fucosyltransferase 4
Chr5_-_19218007 0.55 AT5G47370.1
HAT2
Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein
Chr5_-_5890218 0.55 AT5G17820.1
AT5G17820.2
AT5G17820
Peroxidase superfamily protein
Chr4_+_9928587 0.55 AT4G17870.1
PYR1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr1_-_26415258 0.54 AT1G70140.1
FH8
formin 8
Chr4_-_18417530 0.54 AT4G39680.2
AT4G39680.1
AT4G39680
SAP domain-containing protein
Chr2_-_13319560 0.54 AT2G31240.1
AT2G31240
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_19132283 0.54 AT5G47100.2
AT5G47100.1
CBL9
calcineurin B-like protein 9
Chr1_+_28145978 0.54 AT1G74940.1
AT1G74940
cyclin-dependent kinase, putative (DUF581)
Chr1_+_17847042 0.54 AT1G48300.1
DGAT3
diacylglycerol acyltransferase
Chr5_-_24765511 0.54 AT5G61590.1
AT5G61590
Integrase-type DNA-binding superfamily protein
Chr5_-_4942726 0.54 AT5G15220.2
AT5G15220.1
AT5G15220
Ribosomal protein L27 family protein
Chr2_+_8438393 0.54 AT2G19480.3
AT2G19480.2
AT2G19480.1
NAP1%3B2
nucleosome assembly protein 1;2
Chr1_-_12745748 0.53 AT1G34760.1
AT1G34760.2
GRF11
general regulatory factor 11
Chr4_-_13672413 0.53 AT4G27300.1
AT4G27300
S-locus lectin protein kinase family protein
Chr1_-_21199126 0.53 AT1G56580.1
SVB
plant/protein (Protein of unknown function, DUF538)
Chr5_-_21439133 0.53 AT5G52882.1
AT5G52882
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_3271217 0.53 AT3G10500.2
AT3G10500.1
NAC053
NAC domain containing protein 53
Chr1_+_28053030 0.53 AT1G74670.1
GASA6
Gibberellin-regulated family protein
Chr1_+_29298243 0.53 AT1G77920.1
TGA7
bZIP transcription factor family protein
Chr5_+_22753888 0.52 AT5G56220.2
AT5G56220.1
AT5G56220
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_21887588 0.52 AT1G59590.1
ZCF37
ZCF37
Chr3_+_478949 0.52 AT3G02350.1
GAUT9
galacturonosyltransferase 9
Chr5_+_7502427 0.52 AT5G22580.1
AT5G22580
Stress responsive A/B Barrel Domain-containing protein
Chr2_-_8930120 0.52 AT2G20720.1
AT2G20720
Pentatricopeptide repeat (PPR) superfamily protein
Chr1_+_29926624 0.52 AT1G79560.3
AT1G79560.2
AT1G79560.1
FTSH12
FTSH protease 12
Chr4_+_8688250 0.52 AT4G15233.1
AT4G15233.7
AT4G15233.8
AT4G15233.2
ABCG42
ABC-2 and Plant PDR ABC-type transporter family protein
Chr2_+_11601727 0.52 AT2G27150.3
AT2G27150.1
AT2G27150.5
AT2G27150.4
AT2G27150.6
AT2G27150.2
AAO3
abscisic aldehyde oxidase 3
Chr1_+_20189472 0.52 AT1G54090.1
EXO70D2
exocyst subunit exo70 family protein D2
Chr1_+_11827359 0.51 AT1G32700.1
AT1G32700.2
AT1G32700
PLATZ transcription factor family protein
Chr4_+_8618259 0.51 AT4G15093.1
LigB
catalytic LigB subunit of aromatic ring-opening dioxygenase family
Chr3_+_16386395 0.51 AT3G44890.1
RPL9
ribosomal protein L9
Chr2_-_13559880 0.51 AT2G31890.1
RAP
RAP
Chr4_+_15202288 0.51 AT4G31330.1
AT4G31330
transmembrane protein, putative (Protein of unknown function, DUF599)
Chr4_-_14316879 0.51 AT4G29050.1
AT4G29050.2
AT4G29050
Concanavalin A-like lectin protein kinase family protein
Chr1_-_26587628 0.51 AT1G70520.1
CRK2
cysteine-rich RLK (RECEPTOR-like protein kinase) 2
Chr5_+_8515200 0.51 AT5G24800.1
BZIP9
basic leucine zipper 9
Chr3_+_20578922 0.51 AT3G55510.1
AT3G55510.2
RBL
Noc2p family
Chr1_-_20849054 0.51 AT1G55760.1
AT1G55760
BTB/POZ domain-containing protein
Chr3_-_21387399 0.51 AT3G57710.1
AT3G57710
Protein kinase superfamily protein
Chr3_-_22976603 0.51 AT3G62040.1
AT3G62040
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr4_+_1258532 0.51 AT4G02820.1
AT4G02820
Pentatricopeptide repeat (PPR) superfamily protein
Chr1_-_23610327 0.51 AT1G63670.4
AT1G63670.1
TRM12
hypothetical protein (DUF3741)
Chr1_-_4835089 0.50 AT1G14120.2
AT1G14120.1
AT1G14120.3
AT1G14120
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_+_418327 0.50 AT4G00970.1
AT4G00970.2
CRK41
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Chr2_+_16596838 0.50 AT2G39795.1
AT2G39795
Mitochondrial glycoprotein family protein
Chr4_-_8283263 0.50 AT4G14370.1
AT4G14370.3
AT4G14370.2
AT4G14370
Disease resistance protein (TIR-NBS-LRR class) family
Chr4_-_2388105 0.50 AT4G04700.1
CPK27
calcium-dependent protein kinase 27
Chr3_-_5402652 0.50 AT3G15950.2
AT3G15950.1
AT3G15950.3
AT3G15950.4
AT3G15950.5
NAI2
DNA topoisomerase-like protein
Chr5_-_3148400 0.50 AT5G10060.1
AT5G10060
ENTH/VHS family protein
Chr2_-_16846194 0.50 AT2G40330.1
PYL6
PYR1-like 6
Chr5_+_1153740 0.50 AT5G04200.1
MC9
metacaspase 9
Chr2_+_18061716 0.50 AT2G43500.1
AT2G43500.3
AT2G43500.4
AT2G43500.5
AT2G43500.6
AT2G43500.7
AT2G43500.2
AT2G43500.8
AT2G43500
Plant regulator RWP-RK family protein
Chr3_+_17710160 0.50 AT3G47980.1
AT3G47980
Integral membrane HPP family protein
Chr1_-_11258814 0.50 AT1G31440.1
AT1G31440
SH3 domain-containing protein
Chr5_+_23728588 0.50 AT5G58750.1
AT5G58750.2
AT5G58750
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_+_2234019 0.49 AT2G05840.1
AT2G05840.3
AT2G05840.2
PAA2
20S proteasome subunit PAA2
Chr4_-_15954803 0.49 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Chr1_-_6487153 0.49 AT1G18810.1
AT1G18810
phytochrome kinase substrate-like protein
Chr3_-_7066729 0.49 AT3G20260.1
AT3G20260
DUF1666 family protein (DUF1666)
Chr1_-_3804185 0.49 AT1G11310.2
AT1G11310.1
MLO2
Seven transmembrane MLO family protein
Chr3_-_5727664 0.49 AT3G16810.1
PUM24
pumilio 24
Chr2_+_18582697 0.49 AT2G45050.1
GATA2
GATA transcription factor 2
Chr1_-_2972334 0.49 AT1G09200.1
AT1G09200
Histone superfamily protein
Chr1_-_10720843 0.49 AT1G30370.1
DLAH
alpha/beta-Hydrolases superfamily protein
Chr1_-_25029857 0.49 AT1G67050.1
AT1G67050
membrane-associated kinase regulator
Chr3_+_6073731 0.49 AT3G17750.1
AT3G17750
Protein kinase superfamily protein
Chr5_+_24046512 0.49 AT5G59680.1
AT5G59680
Leucine-rich repeat protein kinase family protein
Chr1_-_3803695 0.49 AT1G11310.3
MLO2
Seven transmembrane MLO family protein
Chr2_-_10757947 0.49 AT2G25260.1
AT2G25260
Hyp O-arabinosyltransferase-like protein
Chr3_+_6266946 0.49 AT3G18280.2
AT3G18280.1
AT3G18280
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_9859801 0.49 AT5G27820.1
AT5G27820
Ribosomal L18p/L5e family protein
Chr4_+_17150740 0.49 AT4G36250.1
ALDH3F1
aldehyde dehydrogenase 3F1
Chr1_+_20462940 0.48 AT1G54890.1
AT1G54890
Late embryogenesis abundant (LEA) protein-like protein
Chr4_-_11404650 0.48 AT4G21410.1
CRK29
cysteine-rich RLK (RECEPTOR-like protein kinase) 29
Chr3_+_9369499 0.48 AT3G25710.1
BHLH32
basic helix-loop-helix 32
Chr5_+_9694938 0.48 AT5G27470.1
AT5G27470
seryl-tRNA synthetase / serine-tRNA ligase
Chr1_-_22249721 0.48 AT1G60390.1
PG1
polygalacturonase 1
Chr4_-_9171064 0.48 AT4G16180.2
AT4G16180
transmembrane protein
Chr1_+_6622055 0.48 AT1G19180.3
AT1G19180.2
JAZ1
jasmonate-zim-domain protein 1
Chr4_-_11405235 0.48 AT4G21410.3
AT4G21410.2
CRK29
cysteine-rich RLK (RECEPTOR-like protein kinase) 29
Chr5_-_2130509 0.48 AT5G06850.1
FTIP1
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Chr3_+_16432286 0.48 AT3G44970.1
AT3G44970.2
AT3G44970
Cytochrome P450 superfamily protein
Chr1_+_4137511 0.48 AT1G12200.1
AT1G12200.2
FMO
Flavin-binding monooxygenase family protein
Chr3_-_17126897 0.48 AT3G46510.1
PUB13
plant U-box 13
Chr5_+_25499933 0.47 AT5G63710.4
AT5G63710
Leucine-rich repeat protein kinase family protein
Chr1_-_9890875 0.47 AT1G28290.2
AT1G28290.1
AGP31
arabinogalactan protein 31

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G35460

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 3.5 GO:0009652 thigmotropism(GO:0009652)
0.3 0.9 GO:0010446 response to alkaline pH(GO:0010446)
0.3 1.5 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.3 0.8 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.3 0.3 GO:0006499 N-terminal protein lipidation(GO:0006498) N-terminal protein myristoylation(GO:0006499) protein myristoylation(GO:0018377)
0.3 1.5 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.2 1.5 GO:0010731 protein glutathionylation(GO:0010731)
0.2 1.0 GO:0071323 cellular response to chitin(GO:0071323)
0.2 0.5 GO:0050777 negative regulation of immune response(GO:0050777)
0.2 0.7 GO:0032490 detection of molecule of bacterial origin(GO:0032490)
0.2 1.2 GO:0080119 ER body organization(GO:0080119)
0.2 0.9 GO:1902315 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.2 1.3 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 0.6 GO:2000045 regulation of G1/S transition of mitotic cell cycle(GO:2000045)
0.2 0.6 GO:0009202 deoxyribonucleoside triphosphate biosynthetic process(GO:0009202)
0.2 1.0 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.2 0.8 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.2 0.8 GO:0033512 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.2 0.7 GO:0043092 L-amino acid import(GO:0043092) L-glutamate import(GO:0051938)
0.2 0.4 GO:0042539 hypotonic salinity response(GO:0042539)
0.2 0.5 GO:0033240 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.2 0.7 GO:0019499 cyanide metabolic process(GO:0019499)
0.2 0.5 GO:0042407 cristae formation(GO:0042407)
0.2 0.9 GO:0046622 positive regulation of organ growth(GO:0046622)
0.2 1.0 GO:0043447 alkane biosynthetic process(GO:0043447)
0.2 0.6 GO:0035865 cellular response to potassium ion(GO:0035865)
0.2 0.5 GO:0097056 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.2 0.8 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.2 0.5 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.2 0.3 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.2 0.6 GO:0080003 thalianol metabolic process(GO:0080003)
0.2 0.8 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.2 0.8 GO:0010361 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.1 0.6 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 0.4 GO:0035493 SNARE complex assembly(GO:0035493)
0.1 0.4 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
0.1 0.4 GO:0019184 glutathione biosynthetic process(GO:0006750) nonribosomal peptide biosynthetic process(GO:0019184)
0.1 0.4 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.1 0.4 GO:0043181 vacuolar sequestering(GO:0043181)
0.1 1.1 GO:0016045 detection of bacterium(GO:0016045)
0.1 0.5 GO:0061062 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 0.3 GO:0015802 basic amino acid transport(GO:0015802)
0.1 1.4 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.4 GO:0051202 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.1 0.5 GO:0006821 chloride transport(GO:0006821)
0.1 0.6 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.1 0.7 GO:0043481 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 0.6 GO:0006106 fumarate metabolic process(GO:0006106)
0.1 0.7 GO:0034059 response to anoxia(GO:0034059)
0.1 0.4 GO:0032990 cell part morphogenesis(GO:0032990) mitochondrion morphogenesis(GO:0070584)
0.1 0.6 GO:0060919 auxin influx(GO:0060919)
0.1 0.3 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.1 1.5 GO:0006278 RNA-dependent DNA biosynthetic process(GO:0006278) telomere maintenance via telomerase(GO:0007004)
0.1 2.1 GO:0009641 shade avoidance(GO:0009641)
0.1 0.3 GO:0045793 positive regulation of cell size(GO:0045793)
0.1 0.3 GO:0046203 spermidine catabolic process(GO:0046203)
0.1 0.4 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 0.9 GO:0009819 drought recovery(GO:0009819)
0.1 0.4 GO:0015959 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.1 0.5 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 0.5 GO:0008608 attachment of spindle microtubules to kinetochore(GO:0008608)
0.1 0.4 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.1 0.2 GO:0010045 response to nickel cation(GO:0010045)
0.1 0.2 GO:0052018 virus induced gene silencing(GO:0009616) modification of morphology or physiology of other organism(GO:0035821) modification by symbiont of host morphology or physiology(GO:0044003) modification of morphology or physiology of other organism involved in symbiotic interaction(GO:0051817) modulation by symbiont of RNA levels in host(GO:0052018) modulation of RNA levels in other organism involved in symbiotic interaction(GO:0052249) cellular response to virus(GO:0098586)
0.1 0.4 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.1 0.7 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.1 0.3 GO:0042255 ribosome assembly(GO:0042255)
0.1 0.3 GO:0033258 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.1 0.1 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.1 0.3 GO:0033120 positive regulation of RNA splicing(GO:0033120)
0.1 0.9 GO:0070129 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.1 0.6 GO:0006531 aspartate metabolic process(GO:0006531)
0.1 0.8 GO:0006102 isocitrate metabolic process(GO:0006102)
0.1 0.5 GO:0006884 cell volume homeostasis(GO:0006884)
0.1 0.3 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.1 0.2 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 0.3 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.1 0.6 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.1 0.3 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.1 0.3 GO:0010447 response to acidic pH(GO:0010447)
0.1 0.3 GO:0019859 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859)
0.1 0.3 GO:0071569 protein ufmylation(GO:0071569)
0.1 1.0 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.1 0.9 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.1 1.1 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.1 0.4 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 0.3 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.1 0.3 GO:1904667 negative regulation of protein ubiquitination(GO:0031397) negative regulation of ligase activity(GO:0051352) negative regulation of ubiquitin-protein transferase activity(GO:0051444) negative regulation of ubiquitin protein ligase activity(GO:1904667)
0.1 0.3 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.1 0.4 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.5 GO:0048530 fruit morphogenesis(GO:0048530)
0.1 0.5 GO:0070542 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.1 0.7 GO:0015691 cadmium ion transport(GO:0015691)
0.1 1.0 GO:0071333 cellular response to glucose stimulus(GO:0071333)
0.1 0.9 GO:0033358 UDP-L-arabinose biosynthetic process(GO:0033358) extracellular polysaccharide biosynthetic process(GO:0045226) capsule polysaccharide biosynthetic process(GO:0045227) capsule organization(GO:0045230) extracellular polysaccharide metabolic process(GO:0046379)
0.1 0.5 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.1 0.3 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.1 0.4 GO:0030242 pexophagy(GO:0030242)
0.1 0.8 GO:0050665 hydrogen peroxide biosynthetic process(GO:0050665)
0.1 0.3 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.1 0.3 GO:0007164 establishment of tissue polarity(GO:0007164)
0.1 0.2 GO:0006968 cellular defense response(GO:0006968)
0.1 1.0 GO:0033238 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238)
0.1 0.4 GO:0035627 ceramide transport(GO:0035627)
0.1 0.3 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.1 GO:0043271 negative regulation of ion transport(GO:0043271)
0.1 0.3 GO:0033499 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.1 0.3 GO:0071963 establishment or maintenance of cell polarity regulating cell shape(GO:0071963) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769)
0.1 0.5 GO:0051014 actin filament severing(GO:0051014)
0.1 0.3 GO:0009558 embryo sac cellularization(GO:0009558)
0.1 0.4 GO:0045899 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.1 0.4 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 0.4 GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.1 0.2 GO:0010032 meiotic chromosome condensation(GO:0010032)
0.1 0.2 GO:0008153 para-aminobenzoic acid biosynthetic process(GO:0008153)
0.1 1.0 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.1 0.6 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.1 0.4 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.1 0.1 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.1 0.3 GO:0072501 cellular divalent inorganic anion homeostasis(GO:0072501)
0.1 0.4 GO:0006000 fructose metabolic process(GO:0006000)
0.1 0.3 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.1 0.4 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 0.2 GO:0043090 amino acid import(GO:0043090)
0.1 0.3 GO:0051289 protein homotetramerization(GO:0051289)
0.1 0.4 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.2 GO:0048478 DNA rewinding(GO:0036292) replication fork protection(GO:0048478)
0.1 0.4 GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000479)
0.1 0.4 GO:0031125 rRNA 3'-end processing(GO:0031125)
0.1 0.6 GO:0030308 negative regulation of cell growth(GO:0030308)
0.1 0.2 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.1 0.3 GO:0000972 transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000972)
0.1 0.3 GO:0006741 NADP biosynthetic process(GO:0006741)
0.1 0.9 GO:1902074 response to salt(GO:1902074)
0.1 0.9 GO:0006538 glutamate catabolic process(GO:0006538)
0.1 0.3 GO:0035305 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.1 0.2 GO:0048451 petal formation(GO:0048451)
0.1 0.2 GO:0009557 antipodal cell differentiation(GO:0009557)
0.1 0.3 GO:0034497 protein localization to pre-autophagosomal structure(GO:0034497)
0.1 0.2 GO:0016578 histone deubiquitination(GO:0016578)
0.1 0.5 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.1 0.4 GO:0016107 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.5 GO:0009610 response to symbiotic fungus(GO:0009610)
0.1 0.5 GO:0070370 cellular heat acclimation(GO:0070370)
0.1 0.5 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.4 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) amino acid export(GO:0032973) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.1 0.7 GO:0010044 response to aluminum ion(GO:0010044)
0.1 0.1 GO:2000011 regulation of adaxial/abaxial pattern formation(GO:2000011)
0.1 0.4 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.1 0.2 GO:0010394 homogalacturonan metabolic process(GO:0010394)
0.1 0.7 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 0.8 GO:0009612 response to mechanical stimulus(GO:0009612)
0.1 0.3 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.1 0.1 GO:0006537 glutamate biosynthetic process(GO:0006537)
0.1 0.4 GO:0016926 protein desumoylation(GO:0016926)
0.1 0.2 GO:1903959 regulation of anion transmembrane transport(GO:1903959)
0.1 0.4 GO:1904961 quiescent center organization(GO:1904961)
0.1 0.2 GO:0051973 regulation of telomerase activity(GO:0051972) positive regulation of telomerase activity(GO:0051973) positive regulation of DNA biosynthetic process(GO:2000573)
0.1 0.2 GO:0042989 sequestering of actin monomers(GO:0042989)
0.1 0.1 GO:0032196 transposition(GO:0032196)
0.1 0.3 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 0.1 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.1 0.2 GO:0042256 mature ribosome assembly(GO:0042256)
0.1 0.5 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.1 0.9 GO:0009750 response to fructose(GO:0009750)
0.1 0.3 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.1 0.3 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.1 0.3 GO:0090548 response to nitrate starvation(GO:0090548)
0.1 0.2 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.1 0.2 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.1 0.2 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.1 0.3 GO:0042126 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.1 0.3 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.1 0.3 GO:0051647 nuclear migration(GO:0007097) nuclear migration along microfilament(GO:0031022) establishment of nucleus localization(GO:0040023) nucleus localization(GO:0051647)
0.1 0.3 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.1 2.4 GO:0031348 negative regulation of defense response(GO:0031348)
0.1 0.3 GO:0016572 histone phosphorylation(GO:0016572)
0.1 0.3 GO:0030835 negative regulation of actin filament depolymerization(GO:0030835) actin filament capping(GO:0051693)
0.1 0.9 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 0.1 GO:0010107 potassium ion import(GO:0010107) positive regulation of ion transmembrane transport(GO:0034767)
0.1 0.2 GO:0015800 acidic amino acid transport(GO:0015800)
0.1 0.2 GO:0016540 protein autoprocessing(GO:0016540)
0.1 0.2 GO:0050792 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of viral process(GO:0050792)
0.1 0.2 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.1 0.2 GO:0000023 maltose metabolic process(GO:0000023)
0.1 0.2 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.1 0.3 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.1 0.3 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.1 0.5 GO:1904666 regulation of ubiquitin protein ligase activity(GO:1904666) positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.1 0.6 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.1 1.4 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.9 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.4 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.0 0.2 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 0.1 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.0 0.1 GO:0051438 regulation of ubiquitin-protein transferase activity(GO:0051438) positive regulation of ubiquitin-protein transferase activity(GO:0051443)
0.0 0.5 GO:0080113 regulation of seed growth(GO:0080113)
0.0 0.2 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.0 1.5 GO:0010025 wax biosynthetic process(GO:0010025)
0.0 0.1 GO:0018196 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.0 1.2 GO:0006614 cotranslational protein targeting to membrane(GO:0006613) SRP-dependent cotranslational protein targeting to membrane(GO:0006614)
0.0 0.2 GO:0051320 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.0 0.1 GO:0070827 cellular component maintenance(GO:0043954) chromatin maintenance(GO:0070827)
0.0 0.4 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.0 0.2 GO:0006680 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.0 0.4 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.0 0.4 GO:0043489 RNA stabilization(GO:0043489)
0.0 0.1 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.0 0.2 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.0 0.8 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.0 0.3 GO:0008156 negative regulation of DNA replication(GO:0008156) negative regulation of DNA-dependent DNA replication(GO:2000104)
0.0 0.6 GO:0051050 positive regulation of transport(GO:0051050)
0.0 0.4 GO:0010315 auxin efflux(GO:0010315)
0.0 0.7 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.5 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 1.4 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 1.0 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.1 GO:0034969 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) histone arginine methylation(GO:0034969) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.0 0.0 GO:0015786 UDP-glucose transport(GO:0015786)
0.0 0.2 GO:0010067 procambium histogenesis(GO:0010067)
0.0 0.5 GO:0006825 copper ion transport(GO:0006825)
0.0 0.2 GO:0080036 regulation of cytokinin-activated signaling pathway(GO:0080036)
0.0 0.3 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.0 0.1 GO:0009584 detection of visible light(GO:0009584)
0.0 0.2 GO:0033048 mitotic spindle assembly checkpoint(GO:0007094) spindle checkpoint(GO:0031577) negative regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032435) negative regulation of sister chromatid segregation(GO:0033046) negative regulation of mitotic sister chromatid segregation(GO:0033048) negative regulation of protein catabolic process(GO:0042177) negative regulation of mitotic metaphase/anaphase transition(GO:0045841) negative regulation of chromosome segregation(GO:0051985) spindle assembly checkpoint(GO:0071173) mitotic spindle checkpoint(GO:0071174) negative regulation of proteasomal protein catabolic process(GO:1901799) negative regulation of metaphase/anaphase transition of cell cycle(GO:1902100) negative regulation of proteolysis involved in cellular protein catabolic process(GO:1903051) negative regulation of cellular protein catabolic process(GO:1903363) negative regulation of mitotic sister chromatid separation(GO:2000816)
0.0 0.5 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.3 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.2 GO:1901465 positive regulation of tetrapyrrole biosynthetic process(GO:1901465)
0.0 1.2 GO:0051644 chloroplast localization(GO:0019750) plastid localization(GO:0051644)
0.0 0.1 GO:0090547 response to low humidity(GO:0090547)
0.0 0.5 GO:0010165 response to X-ray(GO:0010165)
0.0 0.2 GO:0048577 negative regulation of short-day photoperiodism, flowering(GO:0048577)
0.0 0.3 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.0 0.1 GO:0042148 DNA recombinase assembly(GO:0000730) strand invasion(GO:0042148)
0.0 0.1 GO:0000967 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.0 0.9 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.3 GO:0000919 cell plate assembly(GO:0000919)
0.0 0.5 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.0 0.9 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.6 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.0 0.3 GO:0006611 ribosomal large subunit export from nucleus(GO:0000055) protein export from nucleus(GO:0006611)
0.0 0.3 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.0 0.2 GO:0000719 photoreactive repair(GO:0000719)
0.0 0.7 GO:0051260 protein homooligomerization(GO:0051260)
0.0 0.2 GO:2000582 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.0 0.6 GO:0006026 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.3 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.0 0.8 GO:0009638 phototropism(GO:0009638)
0.0 0.1 GO:0016124 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.0 0.5 GO:0010274 hydrotropism(GO:0010274)
0.0 0.1 GO:0010254 nectary development(GO:0010254)
0.0 1.0 GO:0042026 protein refolding(GO:0042026)
0.0 0.2 GO:0007043 cell-cell junction assembly(GO:0007043)
0.0 0.2 GO:0043666 regulation of phosphoprotein phosphatase activity(GO:0043666)
0.0 0.2 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.0 0.4 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 0.9 GO:0010193 response to ozone(GO:0010193)
0.0 0.2 GO:0048629 trichome patterning(GO:0048629)
0.0 0.3 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.2 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.0 0.9 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.2 GO:0071028 nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'(GO:0034427) U4 snRNA 3'-end processing(GO:0034475) nuclear mRNA surveillance(GO:0071028) polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.0 0.9 GO:0006094 gluconeogenesis(GO:0006094)
0.0 0.3 GO:0042814 monopolar cell growth(GO:0042814) regulation of monopolar cell growth(GO:0051513)
0.0 1.8 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.6 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 0.1 GO:0071470 cellular response to osmotic stress(GO:0071470)
0.0 0.9 GO:0009749 response to glucose(GO:0009749)
0.0 0.3 GO:0031936 negative regulation of chromatin silencing(GO:0031936)
0.0 0.3 GO:0007076 mitotic chromosome condensation(GO:0007076) chromosome condensation(GO:0030261)
0.0 1.4 GO:0016145 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.0 0.3 GO:0048598 embryonic morphogenesis(GO:0048598)
0.0 0.5 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.7 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636) unsaturated fatty acid metabolic process(GO:0033559)
0.0 1.2 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.0 1.3 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 0.1 GO:0009193 UDP biosynthetic process(GO:0006225) nucleoside diphosphate biosynthetic process(GO:0009133) pyrimidine nucleoside diphosphate metabolic process(GO:0009138) pyrimidine nucleoside diphosphate biosynthetic process(GO:0009139) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine ribonucleoside diphosphate metabolic process(GO:0009193) pyrimidine ribonucleoside diphosphate biosynthetic process(GO:0009194) UDP metabolic process(GO:0046048)
0.0 0.4 GO:0045927 positive regulation of growth(GO:0045927)
0.0 0.1 GO:0071258 cellular response to gravity(GO:0071258)
0.0 1.1 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.1 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.0 0.8 GO:0030091 protein repair(GO:0030091)
0.0 0.4 GO:0010082 regulation of root meristem growth(GO:0010082)
0.0 0.2 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 0.2 GO:0051567 histone H3-K9 methylation(GO:0051567)
0.0 0.3 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 0.2 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.3 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.3 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.0 2.2 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.0 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.0 0.2 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.1 GO:0048317 seed morphogenesis(GO:0048317)
0.0 0.3 GO:0010088 phloem development(GO:0010088)
0.0 0.1 GO:0032324 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.0 0.1 GO:0080121 AMP transport(GO:0080121)
0.0 0.8 GO:0042274 ribosomal small subunit biogenesis(GO:0042274)
0.0 0.7 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 0.3 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.0 0.3 GO:1990937 xylan acetylation(GO:1990937)
0.0 0.2 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 0.9 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.1 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.0 0.2 GO:1904481 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) folic acid metabolic process(GO:0046655) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.0 0.1 GO:0051639 actin filament network formation(GO:0051639)
0.0 0.3 GO:1990069 stomatal opening(GO:1990069)
0.0 0.9 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 1.4 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.2 GO:0048766 root hair initiation(GO:0048766)
0.0 0.3 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.0 0.1 GO:0000212 meiotic spindle organization(GO:0000212)
0.0 0.2 GO:0043966 histone H3 acetylation(GO:0043966)
0.0 0.3 GO:0097354 protein prenylation(GO:0018342) prenylation(GO:0097354)
0.0 0.1 GO:0032886 regulation of microtubule-based process(GO:0032886)
0.0 0.1 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.0 0.1 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.0 0.2 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.3 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.3 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.0 0.3 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.0 0.1 GO:0030030 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.0 0.1 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.0 0.2 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.0 0.7 GO:0043622 cortical microtubule organization(GO:0043622)
0.0 1.0 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.1 GO:0060149 negative regulation of posttranscriptional gene silencing(GO:0060149)
0.0 0.6 GO:0006334 nucleosome assembly(GO:0006334) chromatin assembly(GO:0031497)
0.0 0.9 GO:0006897 endocytosis(GO:0006897)
0.0 0.2 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.1 GO:0043132 NAD transport(GO:0043132)
0.0 0.6 GO:0006730 one-carbon metabolic process(GO:0006730)
0.0 0.3 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.5 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.0 0.2 GO:0034312 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.0 1.6 GO:0080147 root hair cell development(GO:0080147)
0.0 2.0 GO:0000226 microtubule cytoskeleton organization(GO:0000226)
0.0 0.2 GO:0000338 protein deneddylation(GO:0000338)
0.0 0.6 GO:0010099 regulation of photomorphogenesis(GO:0010099)
0.0 0.1 GO:0019323 pentose catabolic process(GO:0019323)
0.0 1.2 GO:0006338 chromatin remodeling(GO:0006338)
0.0 0.2 GO:0006265 DNA topological change(GO:0006265)
0.0 0.4 GO:0042147 retrograde transport, endosome to Golgi(GO:0042147)
0.0 0.1 GO:0006624 vacuolar protein processing(GO:0006624)
0.0 0.1 GO:0009234 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.0 0.2 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.0 0.1 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.0 0.1 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.0 0.1 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.0 0.1 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.0 0.5 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.1 GO:0009945 radial axis specification(GO:0009945)
0.0 0.4 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.4 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.5 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 0.1 GO:0046717 acid secretion(GO:0046717)
0.0 0.1 GO:0015720 allantoin transport(GO:0015720)
0.0 0.4 GO:0043487 regulation of RNA stability(GO:0043487)
0.0 0.1 GO:0051031 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.0 0.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.2 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.9 GO:0006418 tRNA aminoacylation for protein translation(GO:0006418)
0.0 0.4 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.2 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 0.6 GO:0009185 glycolytic process(GO:0006096) ATP generation from ADP(GO:0006757) purine nucleoside diphosphate metabolic process(GO:0009135) purine ribonucleoside diphosphate metabolic process(GO:0009179) ribonucleoside diphosphate metabolic process(GO:0009185) ADP metabolic process(GO:0046031)
0.0 0.3 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.1 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.0 0.3 GO:0000470 maturation of LSU-rRNA(GO:0000470)
0.0 0.1 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.0 0.0 GO:0046473 phosphatidic acid metabolic process(GO:0046473)
0.0 0.1 GO:0046505 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.0 0.2 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.2 GO:0006596 polyamine biosynthetic process(GO:0006596)
0.0 0.2 GO:0006448 regulation of translational elongation(GO:0006448) regulation of translational fidelity(GO:0006450)
0.0 0.3 GO:0031167 rRNA methylation(GO:0031167)
0.0 2.1 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 0.4 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.0 0.1 GO:0052544 defense response by callose deposition in cell wall(GO:0052544)
0.0 0.0 GO:0071216 cellular response to biotic stimulus(GO:0071216)
0.0 0.1 GO:0015781 pyrimidine nucleotide-sugar transport(GO:0015781)
0.0 0.3 GO:0010252 auxin homeostasis(GO:0010252)
0.0 0.2 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.5 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.0 0.5 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.0 0.3 GO:0097031 NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.0 GO:0046391 5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.0 0.1 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.0 0.1 GO:0052652 cGMP biosynthetic process(GO:0006182) cyclic nucleotide biosynthetic process(GO:0009190) cGMP metabolic process(GO:0046068) cyclic purine nucleotide metabolic process(GO:0052652)
0.0 0.3 GO:0007006 mitochondrial membrane organization(GO:0007006)
0.0 0.2 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.5 GO:0006623 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.0 0.2 GO:0033866 coenzyme A biosynthetic process(GO:0015937) nucleoside bisphosphate biosynthetic process(GO:0033866) ribonucleoside bisphosphate biosynthetic process(GO:0034030) purine nucleoside bisphosphate biosynthetic process(GO:0034033)
0.0 0.4 GO:0022904 respiratory electron transport chain(GO:0022904)
0.0 0.3 GO:0009960 endosperm development(GO:0009960)
0.0 0.3 GO:0002237 response to molecule of bacterial origin(GO:0002237)
0.0 0.5 GO:0006099 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 1.0 GO:0009698 phenylpropanoid metabolic process(GO:0009698)
0.0 0.8 GO:0009606 tropism(GO:0009606)
0.0 0.1 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.4 GO:0009696 salicylic acid metabolic process(GO:0009696)
0.0 0.1 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.0 0.2 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.2 GO:0032200 telomere maintenance(GO:0000723) telomere organization(GO:0032200)
0.0 0.1 GO:1901004 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.0 0.1 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.0 0.1 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.0 0.3 GO:0051336 regulation of hydrolase activity(GO:0051336)
0.0 3.7 GO:0006412 translation(GO:0006412)
0.0 0.6 GO:0048544 recognition of pollen(GO:0048544)
0.0 0.0 GO:0033194 response to hydroperoxide(GO:0033194)
0.0 0.2 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.9 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 0.2 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.1 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.1 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.0 GO:0070509 calcium ion import(GO:0070509)
0.0 0.2 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.1 GO:0010375 stomatal complex patterning(GO:0010375)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0005785 signal recognition particle receptor complex(GO:0005785)
0.2 0.6 GO:0036387 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.2 0.6 GO:0033290 eukaryotic 48S preinitiation complex(GO:0033290)
0.2 1.7 GO:0005662 DNA replication factor A complex(GO:0005662)
0.2 0.9 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.2 0.5 GO:0030689 Noc complex(GO:0030689)
0.2 0.8 GO:0033263 CORVET complex(GO:0033263)
0.1 0.4 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 0.3 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.1 1.1 GO:0010168 ER body(GO:0010168)
0.1 0.7 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 1.0 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.1 0.4 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.1 0.7 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 0.3 GO:0009514 glyoxysome(GO:0009514)
0.1 0.6 GO:0000796 condensin complex(GO:0000796)
0.1 0.4 GO:0034271 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.1 0.3 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.1 0.5 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.1 0.8 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.4 GO:0010007 magnesium chelatase complex(GO:0010007)
0.1 0.8 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 0.5 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.1 0.9 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 0.3 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.1 0.5 GO:0070652 HAUS complex(GO:0070652)
0.1 0.5 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.1 1.4 GO:0009986 cell surface(GO:0009986)
0.1 0.2 GO:0060293 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.1 0.9 GO:0045298 tubulin complex(GO:0045298)
0.1 0.3 GO:0043527 tRNA methyltransferase complex(GO:0043527)
0.1 0.2 GO:0031211 palmitoyltransferase complex(GO:0002178) serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
0.1 0.3 GO:0032133 chromosome passenger complex(GO:0032133)
0.1 0.3 GO:0005905 clathrin-coated pit(GO:0005905)
0.1 0.2 GO:0031298 replication fork protection complex(GO:0031298)
0.1 0.2 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.1 0.6 GO:0072546 ER membrane protein complex(GO:0072546)
0.1 0.3 GO:0005960 glycine cleavage complex(GO:0005960)
0.1 0.3 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.1 0.6 GO:0042555 MCM complex(GO:0042555)
0.1 0.6 GO:0048226 Casparian strip(GO:0048226)
0.1 2.4 GO:0000323 lytic vacuole(GO:0000323)
0.1 1.9 GO:0000145 exocyst(GO:0000145)
0.1 0.8 GO:0045275 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.1 0.5 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 1.5 GO:0022624 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.0 1.5 GO:0055028 cortical microtubule(GO:0055028)
0.0 0.4 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 0.6 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.1 GO:0048500 signal recognition particle(GO:0048500)
0.0 0.3 GO:0017053 transcriptional repressor complex(GO:0017053)
0.0 0.5 GO:0000776 kinetochore(GO:0000776)
0.0 0.9 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.3 GO:0034045 pre-autophagosomal structure membrane(GO:0034045)
0.0 2.6 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.6 GO:0000815 ESCRT III complex(GO:0000815)
0.0 1.0 GO:0005761 organellar large ribosomal subunit(GO:0000315) mitochondrial ribosome(GO:0005761) mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.2 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 0.3 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.0 0.2 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.2 GO:0000938 GARP complex(GO:0000938)
0.0 2.2 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.9 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.2 GO:0000782 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.0 0.2 GO:0030286 dynein complex(GO:0030286)
0.0 0.2 GO:0005776 autophagosome(GO:0005776)
0.0 0.2 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 0.2 GO:0044545 NSL complex(GO:0044545)
0.0 3.9 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.3 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.4 GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.0 0.5 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.5 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 5.4 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.2 GO:0035619 root hair tip(GO:0035619)
0.0 0.1 GO:0032432 actin filament bundle(GO:0032432)
0.0 0.1 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 2.9 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.1 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.0 0.2 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.2 GO:0009346 citrate lyase complex(GO:0009346)
0.0 0.2 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 2.2 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.4 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.6 GO:0042646 plastid nucleoid(GO:0042646)
0.0 1.0 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.3 GO:0030125 clathrin vesicle coat(GO:0030125)
0.0 0.9 GO:0009504 cell plate(GO:0009504)
0.0 0.2 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.3 GO:0000124 SAGA complex(GO:0000124)
0.0 0.1 GO:0005884 actin filament(GO:0005884)
0.0 0.4 GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain(GO:0033178)
0.0 0.6 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 0.3 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 6.2 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.6 GO:0005840 ribosome(GO:0005840)
0.0 0.2 GO:0030686 90S preribosome(GO:0030686)
0.0 0.2 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.0 0.2 GO:0031011 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.0 0.0 GO:1902495 transmembrane transporter complex(GO:1902495)
0.0 0.0 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 60.1 GO:0005829 cytosol(GO:0005829)
0.0 1.0 GO:0016607 nuclear speck(GO:0016607)
0.0 0.9 GO:0099512 microtubule(GO:0005874) supramolecular fiber(GO:0099512) polymeric cytoskeletal fiber(GO:0099513)
0.0 0.4 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 0.1 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.1 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 0.6 GO:0005741 mitochondrial outer membrane(GO:0005741)
0.0 0.1 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.4 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.1 GO:0031932 TORC2 complex(GO:0031932)
0.0 0.1 GO:0000791 euchromatin(GO:0000791)
0.0 0.1 GO:0005769 early endosome(GO:0005769)
0.0 0.1 GO:0030136 clathrin-coated vesicle(GO:0030136)
0.0 0.1 GO:0070552 BRISC complex(GO:0070552)
0.0 0.0 GO:0002189 ribose phosphate diphosphokinase complex(GO:0002189)
0.0 0.0 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.7 GO:0005746 mitochondrial respiratory chain(GO:0005746)
0.0 0.4 GO:0030134 ER to Golgi transport vesicle(GO:0030134)
0.0 0.3 GO:0005770 late endosome(GO:0005770)
0.0 0.2 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.4 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 8.8 GO:0005783 endoplasmic reticulum(GO:0005783)
0.0 0.4 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 0.4 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.3 1.0 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.3 1.3 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.3 1.3 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.2 1.9 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.2 0.9 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.2 0.6 GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.2 0.8 GO:0015928 fucosidase activity(GO:0015928)
0.2 1.0 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.2 1.2 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.2 0.6 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.2 0.8 GO:0016751 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.2 1.1 GO:0050302 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.2 0.2 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.2 0.5 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.2 0.6 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.2 0.2 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.2 0.5 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.2 0.5 GO:0008909 isochorismate synthase activity(GO:0008909)
0.1 0.6 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.1 0.7 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.4 GO:0016842 amidine-lyase activity(GO:0016842)
0.1 1.1 GO:0001653 peptide receptor activity(GO:0001653)
0.1 2.5 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 0.3 GO:0022858 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.1 1.4 GO:0098847 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.1 0.5 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.1 0.9 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.4 GO:0009924 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.1 0.6 GO:0004333 fumarate hydratase activity(GO:0004333)
0.1 0.8 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.1 0.8 GO:0005047 signal recognition particle binding(GO:0005047)
0.1 0.7 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.1 0.3 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.1 0.3 GO:0004776 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.1 0.5 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.9 GO:0008494 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.1 0.3 GO:0004359 glutaminase activity(GO:0004359)
0.1 0.3 GO:0009374 biotin binding(GO:0009374)
0.1 0.3 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.1 1.4 GO:1902936 phosphatidylinositol bisphosphate binding(GO:1902936)
0.1 0.4 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.1 0.5 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 0.3 GO:0019003 GDP binding(GO:0019003)
0.1 0.5 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 1.1 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.1 0.4 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.1 0.3 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 0.3 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.1 0.3 GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.1 0.6 GO:0004448 isocitrate dehydrogenase activity(GO:0004448) isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.1 0.4 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.1 0.3 GO:0016672 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.1 0.4 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.1 0.9 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.1 0.3 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 0.3 GO:0019904 protein domain specific binding(GO:0019904)
0.1 0.4 GO:0034511 U3 snoRNA binding(GO:0034511)
0.1 0.5 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.1 0.3 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.1 0.2 GO:0004766 spermidine synthase activity(GO:0004766)
0.1 0.3 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 0.3 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.3 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.1 0.4 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.1 0.8 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1 0.9 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.1 0.4 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.1 0.6 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 0.7 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 0.2 GO:0036310 annealing helicase activity(GO:0036310)
0.1 0.8 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.4 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.4 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.1 0.4 GO:0022835 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.1 0.4 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.1 0.6 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.1 0.3 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.1 0.4 GO:0051002 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.1 0.2 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.1 1.0 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 0.9 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 0.3 GO:0035174 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.1 1.4 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.1 0.5 GO:0052854 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.1 0.3 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.1 1.6 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.4 GO:0015105 arsenite transmembrane transporter activity(GO:0015105)
0.1 0.4 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 1.5 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 0.4 GO:0004383 guanylate cyclase activity(GO:0004383)
0.1 1.6 GO:0043424 protein histidine kinase binding(GO:0043424)
0.1 0.3 GO:0019156 isoamylase activity(GO:0019156)
0.1 0.5 GO:0051011 microtubule minus-end binding(GO:0051011)
0.1 0.1 GO:0004567 beta-mannosidase activity(GO:0004567)
0.1 0.1 GO:0016849 phosphorus-oxygen lyase activity(GO:0016849)
0.1 0.7 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 0.4 GO:0016929 SUMO-specific protease activity(GO:0016929)
0.1 4.0 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.1 0.3 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.1 0.2 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.1 2.1 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.2 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.1 0.3 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 1.1 GO:0019902 phosphatase binding(GO:0019902)
0.1 0.3 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.1 1.4 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.1 0.3 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 1.0 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 1.1 GO:0019212 phosphatase inhibitor activity(GO:0019212)
0.1 0.7 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.3 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 0.5 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.1 0.8 GO:0008198 ferrous iron binding(GO:0008198)
0.1 0.2 GO:0051738 xanthophyll binding(GO:0051738)
0.0 0.2 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 0.2 GO:0008430 selenium binding(GO:0008430)
0.0 0.2 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 1.5 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.0 1.0 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.3 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.0 0.3 GO:0030619 U1 snRNA binding(GO:0030619)
0.0 0.3 GO:0046030 inositol trisphosphate phosphatase activity(GO:0046030)
0.0 0.7 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.0 0.2 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.2 GO:0004348 glucosylceramidase activity(GO:0004348)
0.0 0.2 GO:0030371 translation repressor activity(GO:0030371)
0.0 0.1 GO:0031210 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.0 1.7 GO:0016597 amino acid binding(GO:0016597)
0.0 0.5 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.0 0.1 GO:0043566 structure-specific DNA binding(GO:0043566)
0.0 0.2 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 1.2 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.2 GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719)
0.0 3.6 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.5 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.0 1.4 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.2 GO:0047517 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.0 0.1 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.0 0.3 GO:0032036 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.0 0.5 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.2 GO:0004758 serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.0 0.2 GO:0016768 spermine synthase activity(GO:0016768)
0.0 0.5 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.4 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.7 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.3 GO:0001671 ATPase activator activity(GO:0001671)
0.0 2.2 GO:0044389 ubiquitin-like protein ligase binding(GO:0044389)
0.0 0.1 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 1.1 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.2 GO:0051723 protein methylesterase activity(GO:0051723)
0.0 0.4 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.0 0.3 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.0 0.2 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.0 0.1 GO:0004623 phospholipase A2 activity(GO:0004623)
0.0 0.5 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 0.5 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 0.4 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.0 0.5 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.2 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.2 GO:0045505 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.0 0.5 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.0 0.1 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.0 0.3 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.0 0.4 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.0 0.2 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.0 0.1 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.0 0.8 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.5 GO:0004743 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.6 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.4 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 0.2 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.3 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.1 GO:0008460 dTDP-glucose 4,6-dehydratase activity(GO:0008460)
0.0 0.1 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.0 0.1 GO:0016420 malonyltransferase activity(GO:0016420)
0.0 0.1 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.3 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.2 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.0 0.9 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.1 GO:0046592 polyamine oxidase activity(GO:0046592)
0.0 0.1 GO:0033862 uridylate kinase activity(GO:0009041) UMP kinase activity(GO:0033862)
0.0 0.3 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.2 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 0.1 GO:0019172 glyoxalase III activity(GO:0019172)
0.0 1.7 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 0.2 GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor(GO:0016639)
0.0 0.3 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.6 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.2 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.2 GO:0043495 protein anchor(GO:0043495)
0.0 0.1 GO:0000150 recombinase activity(GO:0000150)
0.0 0.4 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.3 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.9 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 1.5 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.0 0.1 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 0.4 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.3 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 1.8 GO:0032182 ubiquitin-like protein binding(GO:0032182)
0.0 0.2 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.0 0.1 GO:0035197 siRNA binding(GO:0035197)
0.0 0.4 GO:0022884 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.0 0.2 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.0 1.0 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.2 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.0 2.1 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.7 GO:0031490 chromatin DNA binding(GO:0031490)
0.0 0.2 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.0 1.0 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.0 0.1 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.0 0.1 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.2 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.0 0.4 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.4 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.0 0.1 GO:0030267 glyoxylate reductase (NADP) activity(GO:0030267)
0.0 1.0 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.2 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.6 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.1 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.0 0.1 GO:0035591 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.0 0.1 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.0 0.6 GO:0004568 chitinase activity(GO:0004568)
0.0 0.3 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.2 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.1 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.0 1.2 GO:0043621 protein self-association(GO:0043621)
0.0 1.8 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.2 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.3 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.1 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.6 GO:0043022 ribosome binding(GO:0043022)
0.0 0.1 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.0 0.1 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.0 5.0 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.2 GO:0008312 7S RNA binding(GO:0008312)
0.0 0.1 GO:0004046 aminoacylase activity(GO:0004046)
0.0 0.4 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 4.8 GO:0005509 calcium ion binding(GO:0005509)
0.0 0.1 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.1 GO:0004779 sulfate adenylyltransferase activity(GO:0004779)
0.0 0.2 GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water(GO:0016717)
0.0 0.1 GO:0030527 structural constituent of chromatin(GO:0030527)
0.0 0.2 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.1 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.6 GO:0004812 aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876)
0.0 0.1 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.0 0.1 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.2 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.0 0.4 GO:0003684 damaged DNA binding(GO:0003684)
0.0 0.0 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.0 0.8 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.1 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.4 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.2 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.1 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.1 GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity(GO:0051903)
0.0 0.2 GO:0004629 phospholipase C activity(GO:0004629)
0.0 0.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.0 0.1 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.0 0.3 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.1 GO:0005350 allantoin uptake transmembrane transporter activity(GO:0005274) pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.0 0.3 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.1 GO:0005088 Ras guanyl-nucleotide exchange factor activity(GO:0005088)
0.0 1.4 GO:0051015 actin filament binding(GO:0051015)
0.0 0.1 GO:0051980 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.0 0.0 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.0 0.3 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.0 6.0 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 0.2 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 2.3 GO:0043531 ADP binding(GO:0043531)
0.0 0.3 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.0 GO:0015292 uniporter activity(GO:0015292)
0.0 0.8 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.1 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.3 GO:0051540 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 1.3 GO:0005516 calmodulin binding(GO:0005516)
0.0 0.1 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.0 0.2 GO:0000049 tRNA binding(GO:0000049)
0.0 0.4 GO:0033293 monocarboxylic acid binding(GO:0033293)
0.0 0.2 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.5 GO:0003727 single-stranded RNA binding(GO:0003727)
0.0 0.3 GO:0005496 steroid binding(GO:0005496)
0.0 0.1 GO:0016161 amylase activity(GO:0016160) beta-amylase activity(GO:0016161)
0.0 0.1 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.2 GO:0008641 small protein activating enzyme activity(GO:0008641)
0.0 0.3 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.3 GO:0005249 voltage-gated potassium channel activity(GO:0005249)
0.0 0.1 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.0 0.0 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.0 0.2 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 1.1 GO:0019001 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.2 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.5 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899) RNA polymerase activity(GO:0034062)
0.0 0.1 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 0.5 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.3 PID IL4 2PATHWAY IL4-mediated signaling events
0.2 1.4 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.2 0.8 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.1 0.4 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.1 0.7 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.1 0.3 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.1 0.2 PID MYC PATHWAY C-MYC pathway
0.1 0.4 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.1 0.6 PID NOTCH PATHWAY Notch signaling pathway
0.1 0.1 PID INTEGRIN A9B1 PATHWAY Alpha9 beta1 integrin signaling events
0.1 0.2 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.2 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.1 0.3 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.0 0.2 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.0 0.1 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.0 0.2 PID E2F PATHWAY E2F transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.1 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.3 1.0 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 0.6 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.2 0.6 REACTOME PKB MEDIATED EVENTS Genes involved in PKB-mediated events
0.2 0.7 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 7ALPHA HYDROXYCHOLESTEROL Genes involved in Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
0.2 0.7 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.2 0.6 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.1 0.6 REACTOME SIGNALING BY NOTCH1 Genes involved in Signaling by NOTCH1
0.1 0.2 REACTOME TRANSPORT OF MATURE TRANSCRIPT TO CYTOPLASM Genes involved in Transport of Mature Transcript to Cytoplasm
0.1 0.8 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.3 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.1 0.3 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.1 0.3 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.1 0.1 REACTOME APOPTOSIS Genes involved in Apoptosis
0.0 0.1 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.0 0.1 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.0 0.1 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.0 0.2 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.0 0.6 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.3 REACTOME METABOLISM OF CARBOHYDRATES Genes involved in Metabolism of carbohydrates
0.0 0.7 REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE Genes involved in SRP-dependent cotranslational protein targeting to membrane
0.0 0.2 REACTOME PROCESSIVE SYNTHESIS ON THE LAGGING STRAND Genes involved in Processive synthesis on the lagging strand
0.0 0.0 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.0 0.1 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.0 REACTOME LAGGING STRAND SYNTHESIS Genes involved in Lagging Strand Synthesis
0.0 0.1 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation