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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G33240

Z-value: 0.96

Transcription factors associated with AT1G33240

Gene Symbol Gene ID Gene Info
AT1G33240
AT1G33240 GT-2-like 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
GTL1arTal_v1_Chr1_-_12054753_12054753-0.563.8e-02Click!

Activity profile of AT1G33240 motif

Sorted Z-values of AT1G33240 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_17712290 1.30 AT2G42540.2
AT2G42540.4
AT2G42540.1
AT2G42540.3
COR15A
cold-regulated 15a
Chr1_-_9275193 1.07 AT1G26790.1
AT1G26790
Dof-type zinc finger DNA-binding family protein
Chr3_+_4104463 1.04 AT3G12900.1
AT3G12900
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_-_7401951 0.99 AT4G12470.1
AZI1
azelaic acid induced 1
Chr2_+_538250 0.96 AT2G02120.1
PDF2.1
Scorpion toxin-like knottin superfamily protein
Chr5_+_21240717 0.94 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
Chr1_-_1248826 0.80 AT1G04570.2
AT1G04570.1
AT1G04570
Major facilitator superfamily protein
Chr3_-_82182 0.77 AT3G01260.1
AT3G01260
Galactose mutarotase-like superfamily protein
Chr5_-_17199793 0.77 AT5G42900.1
AT5G42900.3
AT5G42900.2
COR27
cold regulated protein 27
Chr5_-_19648362 0.75 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_19151481 0.73 AT2G46650.1
CB5-C
cytochrome B5 isoform C
Chr1_-_10164452 0.71 AT1G29090.1
AT1G29090
Cysteine proteinases superfamily protein
Chr5_+_19481897 0.69 AT5G48070.1
XTH20
xyloglucan endotransglucosylase/hydrolase 20
Chr4_-_7406994 0.67 AT4G12480.1
EARLI1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_2441565 0.67 AT3G07650.4
AT3G07650.1
AT3G07650.3
AT3G07650.2
COL9
CONSTANS-like 9
Chr4_-_2413447 0.65 AT4G04745.1
AT4G04745
hypothetical protein
Chr5_-_7054281 0.64 AT5G20830.3
SUS1
sucrose synthase 1
Chr3_-_21798303 0.64 AT3G58990.1
IPMI1
isopropylmalate isomerase 1
Chr5_-_7054713 0.64 AT5G20830.1
SUS1
sucrose synthase 1
Chr3_+_6840281 0.63 AT3G19680.1
AT3G19680
hypothetical protein (DUF1005)
Chr5_-_7055398 0.63 AT5G20830.2
SUS1
sucrose synthase 1
Chr4_-_13001948 0.62 AT4G25433.1
AT4G25433
peptidoglycan-binding LysM domain-containing protein
Chr2_+_12004658 0.62 AT2G28160.1
AT2G28160.2
FRU
FER-like regulator of iron uptake
Chr1_-_28897120 0.62 AT1G76930.2
EXT4
extensin 4
Chr1_+_10477885 0.62 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
Chr1_-_28896883 0.61 AT1G76930.1
EXT4
extensin 4
Chr2_-_12343443 0.61 AT2G28780.1
AT2G28780
P-hydroxybenzoic acid efflux pump subunit
Chr1_-_507268 0.59 AT1G02460.1
AT1G02460
Pectin lyase-like superfamily protein
Chr5_-_3728726 0.59 AT5G11590.1
TINY2
Integrase-type DNA-binding superfamily protein
Chr3_-_4834015 0.57 AT3G14440.1
NCED3
nine-cis-epoxycarotenoid dioxygenase 3
Chr3_+_19845097 0.57 AT3G53530.2
AT3G53530.1
NAKR3
Chloroplast-targeted copper chaperone protein
Chr1_+_22198266 0.56 AT1G60190.1
PUB19
ARM repeat superfamily protein
Chr3_+_22935510 0.56 AT3G61930.1
AT3G61930
hypothetical protein
Chr5_-_19977620 0.55 AT5G49280.1
AT5G49280
hydroxyproline-rich glycoprotein family protein
Chr2_+_15106940 0.54 AT2G35960.1
NHL12
NDR1/HIN1-like 12
Chr1_+_27538190 0.53 AT1G73220.1
OCT1
organic cation/carnitine transporter1
Chr1_-_30186716 0.53 AT1G80280.1
AT1G80280
alpha/beta-Hydrolases superfamily protein
Chr3_+_3923735 0.53 AT3G12320.2
AT3G12320
hypothetical protein
Chr1_+_21868190 0.52 AT1G59530.1
bZIP4
basic leucine-zipper 4
Chr1_+_18346958 0.51 AT1G49570.1
AT1G49570
Peroxidase superfamily protein
Chr1_+_18305445 0.51 AT1G49450.1
AT1G49450
Transducin/WD40 repeat-like superfamily protein
Chr3_+_10547441 0.51 AT3G28290.1
AT14A
transmembrane protein, putative (DUF677)
Chr3_+_3923515 0.51 AT3G12320.1
AT3G12320
hypothetical protein
Chr1_+_1425539 0.51 AT1G05000.3
AT1G05000.1
AT1G05000.2
PFA-DSP1
Phosphotyrosine protein phosphatases superfamily protein
Chr1_-_11222789 0.50 AT1G31350.1
AT1G31350.2
KUF1
KAR-UP F-box 1
Chr4_+_9028262 0.50 AT4G15910.1
DI21
drought-induced 21
Chr5_-_4873683 0.50 AT5G15050.1
AT5G15050
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr5_+_1746548 0.50 AT5G05810.1
ATL43
RING/U-box superfamily protein
Chr2_+_13987669 0.50 AT2G32960.1
PFA-DSP2
Phosphotyrosine protein phosphatases superfamily protein
Chr1_-_27755297 0.50 AT1G73810.1
AT1G73810
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr5_+_17973775 0.50 AT5G44575.1
AT5G44575
hypothetical protein
Chr3_+_1695156 0.50 AT3G05730.1
AT3G05730
defensin-like protein
Chr5_+_8584535 0.50 AT5G24920.1
GDU5
glutamine dumper 5
Chr1_+_5638779 0.49 AT1G16500.1
AT1G16500
filamentous hemagglutinin transporter
Chr4_+_10498748 0.49 AT4G19200.1
AT4G19200
proline-rich family protein
Chr5_+_8541713 0.49 AT5G24860.3
AT5G24860.1
FPF1
flowering promoting factor 1
Chr3_-_20816035 0.49 AT3G56090.1
FER3
ferritin 3
Chr4_+_8646150 0.49 AT4G15160.2
AT4G15160.1
AT4G15160
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_10565674 0.48 AT3G28300.1
AT14A
transmembrane protein, putative (DUF677)
Chr5_+_8687188 0.48 AT5G25160.1
ZFP3
zinc finger protein 3
Chr3_+_3923969 0.48 AT3G12320.3
AT3G12320
hypothetical protein
Chr2_-_16563441 0.47 AT2G39710.1
AT2G39710
Eukaryotic aspartyl protease family protein
Chr1_-_10664570 0.46 AT1G30280.2
AT1G30280.3
AT1G30280.1
AT1G30280
Chaperone DnaJ-domain superfamily protein
Chr1_+_954290 0.46 AT1G03790.1
SOM
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr2_+_2763449 0.46 AT2G06850.1
AT2G06850.2
XTH4
xyloglucan endotransglucosylase/hydrolase 4
Chr5_-_6976036 0.46 AT5G20630.1
GER3
germin 3
Chr3_+_10576961 0.46 AT3G28310.1
AT3G28310
hypothetical protein (DUF677)
Chr2_-_16908152 0.45 AT2G40475.1
ASG8
hypothetical protein
Chr5_+_10632241 0.45 AT5G28626.1
SADHU1-3

Chr1_+_28498821 0.45 AT1G75900.1
AT1G75900
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_14117367 0.45 AT4G28560.1
RIC7
ROP-interactive CRIB motif-containing protein 7
Chr1_-_10184512 0.45 AT1G29160.1
AT1G29160
Dof-type zinc finger DNA-binding family protein
Chr1_-_3880391 0.45 AT1G11545.1
XTH8
xyloglucan endotransglucosylase/hydrolase 8
Chr1_+_22767617 0.44 AT1G61667.1
AT1G61667
serine protease, putative (Protein of unknown function, DUF538)
Chr5_-_5759817 0.44 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr4_+_10521259 0.44 AT4G19230.1
AT4G19230.2
CYP707A1
cytochrome P450, family 707, subfamily A, polypeptide 1
Chr1_+_17766738 0.44 AT1G48100.1
AT1G48100
Pectin lyase-like superfamily protein
Chr4_+_18576216 0.44 AT4G40070.1
AT4G40070
RING/U-box superfamily protein
Chr1_+_16263805 0.43 AT1G43160.1
RAP2.6
related to AP2 6
Chr1_-_28581315 0.43 AT1G76160.1
sks5
SKU5 similar 5
Chr4_+_16596640 0.43 AT4G34800.1
AT4G34800
SAUR-like auxin-responsive protein family
Chr3_+_3595694 0.43 AT3G11430.1
GPAT5
glycerol-3-phosphate acyltransferase 5
Chr2_-_18095093 0.43 AT2G43620.1
AT2G43620
Chitinase family protein
Chr1_+_4105223 0.43 AT1G12110.1
NRT1.1
nitrate transporter 1.1
Chr2_+_528179 0.43 AT2G02100.1
LCR69
low-molecular-weight cysteine-rich 69
Chr5_+_22492892 0.42 AT5G55530.2
AT5G55530.1
AT5G55530
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr5_-_19328940 0.42 AT5G47700.2
AT5G47700.1
AT5G47700
60S acidic ribosomal protein family
Chr5_+_22388782 0.42 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr1_+_25701770 0.42 AT1G68500.1
AT1G68500
hypothetical protein
Chr5_+_3550300 0.42 AT5G11160.1
AT5G11160.2
APT5
adenine phosphoribosyltransferase 5
Chr4_-_12092217 0.42 AT4G23070.1
RBL7
RHOMBOID-like protein 7
Chr5_+_16161449 0.42 AT5G40390.1
SIP1
Raffinose synthase family protein
Chr5_+_21771811 0.42 AT5G53590.1
AT5G53590
SAUR-like auxin-responsive protein family
Chr5_-_27504 0.41 AT5G01075.1
AT5G01075
Glycosyl hydrolase family 35 protein
Chr3_-_7656053 0.41 AT3G21720.1
ICL
isocitrate lyase
Chr5_+_7718118 0.41 AT5G23020.1
IMS2
2-isopropylmalate synthase 2
Chr4_-_857020 0.41 AT4G01970.1
STS
stachyose synthase
Chr1_+_6927736 0.41 AT1G19960.1
AT1G19960
transcription factor
Chr5_+_22493103 0.41 AT5G55530.3
AT5G55530
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr5_-_15713158 0.41 AT5G39240.1
AT5G39240
transcription factor UPBEAT-like protein
Chr1_-_105330 0.41 AT1G01250.1
AT1G01250
Integrase-type DNA-binding superfamily protein
Chr3_+_5562400 0.41 AT3G16390.2
NSP3
nitrile specifier protein 3
Chr5_-_25866972 0.41 AT5G64700.2
AT5G64700.1
UMAMIT21
nodulin MtN21 /EamA-like transporter family protein
Chr5_-_4620551 0.41 AT5G14330.1
AT5G14330
transmembrane protein
Chr1_+_26400694 0.41 AT1G70090.1
AT1G70090.2
LGT8
glucosyl transferase family 8
Chr4_+_994726 0.40 AT4G02280.1
SUS3
sucrose synthase 3
Chr5_+_22388521 0.40 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr4_-_857401 0.40 AT4G01970.2
STS
stachyose synthase
Chr4_+_8804070 0.40 AT4G15393.2
AT4G15393.3
AT4G15393.1
CYP702A5
cytochrome P450, family 702, subfamily A, polypeptide 5
Chr3_+_5562558 0.40 AT3G16390.1
NSP3
nitrile specifier protein 3
Chr1_+_22767464 0.40 AT1G61667.2
AT1G61667
serine protease, putative (Protein of unknown function, DUF538)
Chr4_+_16617608 0.40 AT4G34881.1
AT4G34881
transmembrane protein
Chr1_-_6579314 0.40 AT1G19050.1
ARR7
response regulator 7
Chr1_+_8692630 0.40 AT1G24530.1
AT1G24530
Transducin/WD40 repeat-like superfamily protein
Chr3_+_18249663 0.40 AT3G49220.2
AT3G49220.3
AT3G49220.1
AT3G49220
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_-_14592140 0.40 AT2G34650.1
PID
Protein kinase superfamily protein
Chr5_+_7703041 0.39 AT5G23010.2
AT5G23010.1
AT5G23010.3
MAM1
methylthioalkylmalate synthase 1
Chr1_+_23168767 0.39 AT1G62570.1
FMO GS-OX4
flavin-monooxygenase glucosinolate S-oxygenase 4
Chr5_-_7820760 0.39 AT5G23220.1
NIC3
nicotinamidase 3
Chr5_-_18189523 0.39 AT5G45070.1
PP2-A8
phloem protein 2-A8
Chr3_+_10911132 0.39 AT3G28910.1
AT3G28910.2
MYB30
myb domain protein 30
Chr4_+_5244865 0.39 AT4G08300.1
UMAMIT17
nodulin MtN21 /EamA-like transporter family protein
Chr1_-_10473502 0.38 AT1G29910.1
CAB3
chlorophyll A/B binding protein 3
Chr1_+_25437900 0.38 AT1G67850.1
AT1G67850.4
AT1G67850.5
AT1G67850.3
AT1G67850.2
AT1G67850
lysine ketoglutarate reductase trans-splicing protein (DUF707)
Chr5_-_16832357 0.38 AT5G42110.1
AT5G42110
hypothetical protein
Chr5_-_18506382 0.38 AT5G45630.1
AT5G45630
senescence regulator (Protein of unknown function, DUF584)
Chr5_+_25233881 0.38 AT5G62865.1
AT5G62865
hypothetical protein
Chr3_-_5845220 0.38 AT3G17130.1
AT3G17130
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr2_+_17728479 0.38 AT2G42580.1
TTL3
tetratricopetide-repeat thioredoxin-like 3
Chr3_-_3003454 0.38 AT3G09780.1
CCR1
CRINKLY4 related 1
Chr5_+_7676938 0.38 AT5G22940.2
F8H
glucuronoxylan glucuronosyltransferase, putative
Chr2_+_19469571 0.37 AT2G47440.2
AT2G47440.1
AT2G47440
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_+_10241875 0.37 AT2G24090.1
PRPL35
Ribosomal protein L35
Chr2_+_9844134 0.37 AT2G23130.1
AT2G23130.2
AGP17
arabinogalactan protein 17
Chr4_+_12649985 0.37 AT4G24480.2
AT4G24480.1
AT4G24480.3
AT4G24480
Protein kinase superfamily protein
Chr4_-_9583290 0.37 AT4G17030.1
EXLB1
expansin-like B1
Chr2_+_10244745 0.37 AT2G24100.1
ASG1
ATP-dependent DNA helicase
Chr5_+_7676662 0.37 AT5G22940.1
F8H
glucuronoxylan glucuronosyltransferase, putative
Chr2_+_8183638 0.37 AT2G18890.1
AT2G18890.3
AT2G18890
Protein kinase superfamily protein
Chr4_+_13275200 0.37 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
Chr3_+_17446818 0.36 AT3G47350.3
AT3G47350.2
AT3G47350.1
HSD2
hydroxysteroid dehydrogenase 2
Chr3_-_4794417 0.36 AT3G14362.1
RTFL10
ROTUNDIFOLIA like 10
Chr3_+_1795145 0.36 AT3G05980.1
AT3G05980
hypothetical protein
Chr1_-_20733997 0.36 AT1G55535.2
AT1G55535.1
AT1G55535.3
AT1G55535
transmembrane protein
Chr5_+_21943983 0.36 AT5G54070.1
HSFA9
heat shock transcription factor A9
Chr4_-_15017365 0.36 AT4G30830.1
AT4G30830
myosin-like protein (Protein of unknown function, DUF593)
Chr2_-_19361162 0.36 AT2G47160.2
BOR1
HCO3- transporter family
Chr5_+_18537239 0.36 AT5G45700.1
AT5G45700
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr4_-_5456100 0.36 AT4G08570.1
AT4G08570
Heavy metal transport/detoxification superfamily protein
Chr2_-_19361328 0.36 AT2G47160.1
BOR1
HCO3- transporter family
Chr2_+_7703805 0.36 AT2G17730.1
AT2G17730.2
NIP2
NEP-interacting protein 2
Chr4_-_6718550 0.36 AT4G10960.1
UGE5
UDP-D-glucose/UDP-D-galactose 4-epimerase 5
Chr3_-_6849582 0.36 AT3G19710.1
BCAT4
branched-chain aminotransferase4
Chr5_-_21357219 0.35 AT5G52650.1
AT5G52650
RNA binding Plectin/S10 domain-containing protein
Chr3_-_20903080 0.35 AT3G56370.1
AT3G56370
Leucine-rich repeat protein kinase family protein
Chr3_-_18767529 0.35 AT3G50570.1
AT3G50570.2
AT3G50570
hydroxyproline-rich glycoprotein family protein
Chr3_+_5025383 0.35 AT3G14940.2
PPC3
phosphoenolpyruvate carboxylase 3
Chr3_+_8172479 0.35 AT3G23000.1
CIPK7
CBL-interacting protein kinase 7
Chr3_+_5025184 0.35 AT3G14940.1
PPC3
phosphoenolpyruvate carboxylase 3
Chr5_-_18021508 0.35 AT5G44670.1
GALS2
glycosyltransferase family protein (DUF23)
Chr4_+_17639 0.35 AT4G00050.1
AT4G00050.3
AT4G00050.2
UNE10
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr3_-_11269228 0.35 AT3G29360.2
AT3G29360.1
UGD2
UDP-glucose 6-dehydrogenase family protein
Chr3_+_9295175 0.35 AT3G25585.5
AT3G25585.1
AT3G25585.3
AT3G25585.4
AT3G25585.2
AAPT2
aminoalcoholphosphotransferase
Chr3_+_22630331 0.35 AT3G61150.1
HDG1
homeodomain GLABROUS 1
Chr5_-_23737335 0.35 AT5G58780.1
cPT5
Undecaprenyl pyrophosphate synthetase family protein
Chr5_+_15878698 0.35 AT5G39660.1
AT5G39660.3
AT5G39660.2
CDF2
cycling DOF factor 2
Chr4_-_14883583 0.35 AT4G30440.1
GAE1
UDP-D-glucuronate 4-epimerase 1
Chr5_-_18547205 0.34 AT5G45720.2
AT5G45720.1
AT5G45720
AAA-type ATPase family protein
Chr3_-_4075073 0.34 AT3G12820.2
MYB10
myb domain protein 10
Chr4_-_233652 0.34 AT4G00530.1
AT4G00530
UvrABC system protein A
Chr1_-_18360426 0.34 AT1G49600.2
AT1G49600.1
AT1G49600.3
RBP47A
RNA-binding protein 47A
Chr5_-_5759449 0.34 AT5G17460.4
AT5G17460.5
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr2_-_15790139 0.34 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
Chr3_-_4959704 0.34 AT3G14770.1
SWEET2
Nodulin MtN3 family protein
Chr1_-_23460884 0.34 AT1G63245.1
CLE14
CLAVATA3/ESR-RELATED 14
Chr3_-_19821505 0.34 AT3G53460.1
AT3G53460.2
AT3G53460.3
AT3G53460.4
CP29
chloroplast RNA-binding protein 29
Chr4_-_14733628 0.34 AT4G30120.1
HMA3
heavy metal atpase 3
Chr5_+_4768263 0.34 AT5G14760.1
AO
L-aspartate oxidase
Chr1_-_25622593 0.34 AT1G68360.1
AT1G68360
C2H2 and C2HC zinc fingers superfamily protein
Chr3_-_8456708 0.34 AT3G23560.1
AT3G23560.2
ALF5
MATE efflux family protein
Chr2_-_16804823 0.34 AT2G40230.1
AT2G40230
HXXXD-type acyl-transferase family protein
Chr3_+_5934033 0.34 AT3G17350.1
AT3G17350.2
AT3G17350
wall-associated receptor kinase carboxy-terminal protein
Chr1_+_28377377 0.34 AT1G75580.1
AT1G75580
SAUR-like auxin-responsive protein family
Chr2_+_2026162 0.34 AT2G05520.4
AT2G05520.5
AT2G05520.6
AT2G05520.3
GRP-3
glycine-rich protein 3
Chr2_-_16042383 0.34 AT2G38290.2
AT2G38290.1
AMT2
ammonium transporter 2
Chr2_-_9564850 0.34 AT2G22500.1
UCP5
uncoupling protein 5
Chr3_-_8865239 0.33 AT3G24420.1
AT3G24420
alpha/beta-Hydrolases superfamily protein
Chr4_-_9250343 0.33 AT4G16370.1
OPT3
oligopeptide transporter
Chr1_-_7089606 0.33 AT1G20450.1
AT1G20450.2
ERD10
Dehydrin family protein
Chr2_+_17221840 0.33 AT2G41310.1
RR3
response regulator 3
Chr2_+_2025991 0.33 AT2G05520.2
AT2G05520.1
GRP-3
glycine-rich protein 3
Chr1_+_4647815 0.33 AT1G13590.1
PSK1
phytosulfokine 1 precursor
Chr2_-_15014147 0.33 AT2G35710.3
AT2G35710.4
AT2G35710.1
PGSIP7
Nucleotide-diphospho-sugar transferases superfamily protein
Chr1_-_7504274 0.33 AT1G21440.1
AT1G21440.2
AT1G21440
Phosphoenolpyruvate carboxylase family protein
Chr5_+_15543115 0.33 AT5G38820.1
AT5G38820.2
AT5G38820
Transmembrane amino acid transporter family protein
Chr4_+_160643 0.33 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr4_+_8925571 0.33 AT4G15660.1
AT4G15660
Thioredoxin superfamily protein
Chr5_+_23619459 0.33 AT5G58420.1
AT5G58420
Ribosomal protein S4 (RPS4A) family protein
Chr5_+_20427749 0.33 AT5G50175.1
AT5G50175
transmembrane protein
Chr5_+_20130752 0.33 AT5G49600.1
AT5G49600
plant/protein (Protein of unknown function, DUF538)

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G33240

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.9 GO:0072708 response to sorbitol(GO:0072708)
0.3 0.9 GO:0015696 ammonium transport(GO:0015696)
0.2 0.7 GO:1990532 stress response to nickel ion(GO:1990532)
0.2 0.9 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.2 0.8 GO:0006097 glyoxylate cycle(GO:0006097)
0.2 0.7 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.2 0.2 GO:0033566 gamma-tubulin complex localization(GO:0033566)
0.2 0.5 GO:0016124 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.1 0.7 GO:0046713 borate transport(GO:0046713)
0.1 0.4 GO:0019406 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.1 0.5 GO:0006065 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.1 0.4 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.1 0.5 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.1 0.4 GO:0071258 cellular response to gravity(GO:0071258)
0.1 1.1 GO:0009819 drought recovery(GO:0009819)
0.1 0.4 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.1 0.1 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.1 1.0 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.1 0.7 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 0.3 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.1 0.3 GO:0010254 nectary development(GO:0010254)
0.1 0.3 GO:0090143 nucleoid organization(GO:0090143)
0.1 0.3 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 0.4 GO:0036079 purine nucleotide-sugar transport(GO:0036079)
0.1 0.4 GO:0070509 calcium ion import(GO:0070509)
0.1 0.6 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.1 1.6 GO:1902074 response to salt(GO:1902074)
0.1 0.2 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.1 0.8 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.1 1.2 GO:0010158 abaxial cell fate specification(GO:0010158)
0.1 0.3 GO:0070537 histone H2A K63-linked deubiquitination(GO:0070537)
0.1 0.6 GO:0048830 adventitious root development(GO:0048830)
0.1 0.2 GO:0015802 basic amino acid transport(GO:0015802)
0.1 0.2 GO:0009915 phloem sucrose loading(GO:0009915)
0.1 0.5 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.1 0.3 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.1 0.4 GO:0060631 regulation of meiosis I(GO:0060631)
0.1 0.7 GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning(GO:0060774)
0.1 1.6 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 0.5 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.2 GO:1902066 regulation of cell wall pectin metabolic process(GO:1902066)
0.1 1.3 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 0.3 GO:0048462 carpel formation(GO:0048462)
0.1 0.2 GO:0046102 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.1 0.4 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 1.1 GO:0010274 hydrotropism(GO:0010274)
0.1 0.8 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.1 0.3 GO:0034389 lipid particle organization(GO:0034389)
0.1 0.5 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.1 0.3 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.1 0.4 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 1.6 GO:0006826 iron ion transport(GO:0006826)
0.1 0.7 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 2.2 GO:0010187 negative regulation of seed germination(GO:0010187)
0.1 0.2 GO:0071485 cellular response to absence of light(GO:0071485)
0.1 0.2 GO:0010541 acropetal auxin transport(GO:0010541)
0.1 0.1 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.1 0.1 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.1 0.6 GO:0046473 phosphatidic acid metabolic process(GO:0046473)
0.1 0.6 GO:0043489 RNA stabilization(GO:0043489)
0.1 0.3 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 1.0 GO:0048766 root hair initiation(GO:0048766)
0.1 0.4 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.1 0.3 GO:0009660 amyloplast organization(GO:0009660)
0.1 0.4 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.1 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.2 GO:0080051 cutin transport(GO:0080051)
0.1 0.3 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 1.0 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.1 0.2 GO:0010288 response to lead ion(GO:0010288)
0.1 0.7 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.1 0.2 GO:0019695 choline metabolic process(GO:0019695)
0.1 0.3 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 0.1 GO:0035493 SNARE complex assembly(GO:0035493)
0.1 0.4 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.1 0.4 GO:0032204 regulation of telomere maintenance(GO:0032204)
0.1 0.3 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.1 0.4 GO:0090356 negative regulation of auxin metabolic process(GO:0090356)
0.1 0.2 GO:1900033 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.1 0.1 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.1 0.1 GO:0090355 positive regulation of auxin metabolic process(GO:0090355)
0.1 0.5 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.2 GO:0018364 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.1 0.2 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.1 1.2 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.1 0.6 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.2 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.2 GO:0009799 specification of symmetry(GO:0009799)
0.0 0.1 GO:0090435 protein localization to nuclear envelope(GO:0090435)
0.0 0.2 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.4 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.0 0.4 GO:0009298 GDP-mannose biosynthetic process(GO:0009298)
0.0 0.1 GO:0070150 mitochondrial glycyl-tRNA aminoacylation(GO:0070150)
0.0 0.2 GO:0010226 response to lithium ion(GO:0010226)
0.0 0.5 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.0 0.5 GO:0010098 suspensor development(GO:0010098)
0.0 0.1 GO:0042766 nucleosome mobilization(GO:0042766)
0.0 0.2 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.0 0.3 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.1 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.0 0.1 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.0 0.1 GO:0018196 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.0 0.8 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.0 0.1 GO:0033194 response to hydroperoxide(GO:0033194)
0.0 0.3 GO:2000014 regulation of endosperm development(GO:2000014)
0.0 0.4 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 0.2 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.0 0.1 GO:0034969 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) histone arginine methylation(GO:0034969) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.0 0.2 GO:2000736 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.0 0.1 GO:0043987 histone-serine phosphorylation(GO:0035404) histone H3-S10 phosphorylation(GO:0043987)
0.0 0.8 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.0 0.2 GO:0006777 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.0 0.3 GO:0019079 viral genome replication(GO:0019079)
0.0 0.2 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.0 0.1 GO:0010063 positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.0 0.2 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.0 0.5 GO:0051443 positive regulation of ubiquitin-protein transferase activity(GO:0051443)
0.0 0.7 GO:0009556 microsporogenesis(GO:0009556)
0.0 0.3 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.0 0.1 GO:0033273 response to vitamin(GO:0033273)
0.0 0.2 GO:0080121 AMP transport(GO:0080121)
0.0 0.2 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.0 0.2 GO:0071836 nectar secretion(GO:0071836)
0.0 0.4 GO:0009435 NAD biosynthetic process(GO:0009435)
0.0 0.3 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 0.2 GO:0034059 response to anoxia(GO:0034059)
0.0 0.1 GO:0016572 histone phosphorylation(GO:0016572)
0.0 0.1 GO:0072530 purine-containing compound transmembrane transport(GO:0072530)
0.0 0.1 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.0 0.2 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.1 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.0 0.1 GO:0019427 acetate metabolic process(GO:0006083) acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.0 1.0 GO:0008360 regulation of cell shape(GO:0008360)
0.0 0.1 GO:1990110 callus formation(GO:1990110)
0.0 0.2 GO:0031145 anaphase-promoting complex-dependent catabolic process(GO:0031145)
0.0 0.9 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.5 GO:0052541 plant-type cell wall cellulose metabolic process(GO:0052541)
0.0 0.0 GO:0031114 regulation of microtubule depolymerization(GO:0031114)
0.0 0.2 GO:0010358 leaf shaping(GO:0010358)
0.0 0.3 GO:0098719 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.0 0.5 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.0 0.2 GO:0043090 amino acid import(GO:0043090)
0.0 0.1 GO:0010971 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.0 0.5 GO:0051307 meiotic chromosome separation(GO:0051307)
0.0 0.7 GO:0009269 response to desiccation(GO:0009269)
0.0 0.1 GO:1904062 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.0 0.1 GO:0015739 sialic acid transport(GO:0015739)
0.0 0.2 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.5 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.2 GO:0046208 spermine catabolic process(GO:0046208)
0.0 0.2 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.0 0.0 GO:0010500 transmitting tissue development(GO:0010500)
0.0 0.1 GO:0043471 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.0 0.1 GO:0043157 response to cation stress(GO:0043157)
0.0 0.1 GO:0050993 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.0 0.1 GO:0006651 diacylglycerol biosynthetic process(GO:0006651) diacylglycerol metabolic process(GO:0046339)
0.0 0.1 GO:0006474 N-terminal protein amino acid acetylation(GO:0006474) N-terminal peptidyl-methionine acetylation(GO:0017196)
0.0 0.3 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.0 0.1 GO:0051204 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.0 0.7 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.5 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.0 0.9 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.1 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.0 0.5 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.3 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.0 0.1 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.0 0.1 GO:0001112 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.0 0.5 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.2 GO:1902299 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0 0.1 GO:0006531 2-oxoglutarate metabolic process(GO:0006103) aspartate metabolic process(GO:0006531)
0.0 0.5 GO:0010152 pollen maturation(GO:0010152)
0.0 0.2 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.0 0.2 GO:0010148 transpiration(GO:0010148)
0.0 0.5 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 1.2 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.4 GO:0009684 indoleacetic acid biosynthetic process(GO:0009684)
0.0 0.2 GO:1903340 positive regulation of secondary cell wall biogenesis(GO:1901348) positive regulation of cell wall organization or biogenesis(GO:1903340)
0.0 0.3 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.1 GO:0010508 positive regulation of autophagy(GO:0010508)
0.0 0.1 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.0 0.1 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 0.4 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.0 0.4 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.1 GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.0 0.2 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.1 GO:0071452 cellular response to singlet oxygen(GO:0071452)
0.0 0.1 GO:0002215 defense response to nematode(GO:0002215)
0.0 1.2 GO:0009664 plant-type cell wall organization(GO:0009664)
0.0 0.3 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.3 GO:0071668 cell wall assembly(GO:0070726) plant-type cell wall assembly(GO:0071668)
0.0 0.3 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.2 GO:0010222 stem vascular tissue pattern formation(GO:0010222)
0.0 0.1 GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly(GO:0033615)
0.0 0.2 GO:0048587 regulation of short-day photoperiodism, flowering(GO:0048587)
0.0 0.4 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 0.2 GO:0006000 fructose metabolic process(GO:0006000)
0.0 0.2 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.2 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.1 GO:1902916 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.0 0.1 GO:0046704 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.0 0.3 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.0 0.5 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.4 GO:0060688 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 1.6 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.1 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.0 0.9 GO:1901800 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.0 0.2 GO:0046443 FAD metabolic process(GO:0046443)
0.0 0.1 GO:0097502 mannosylation(GO:0097502)
0.0 0.8 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.1 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.0 0.1 GO:0002119 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.0 1.1 GO:0051274 beta-glucan biosynthetic process(GO:0051274)
0.0 0.1 GO:0009650 UV protection(GO:0009650)
0.0 0.2 GO:0019856 pyrimidine nucleobase biosynthetic process(GO:0019856)
0.0 0.5 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.2 GO:2000757 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.0 0.1 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.0 0.1 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.0 0.1 GO:0006425 glutaminyl-tRNA aminoacylation(GO:0006425)
0.0 0.0 GO:0019348 dolichol metabolic process(GO:0019348)
0.0 0.1 GO:0090316 positive regulation of protein transport(GO:0051222) positive regulation of intracellular protein transport(GO:0090316) positive regulation of cellular protein localization(GO:1903829) positive regulation of establishment of protein localization(GO:1904951)
0.0 0.2 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.3 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.1 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.0 0.1 GO:0006670 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.0 0.2 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.0 GO:0048859 formation of organ boundary(GO:0010160) formation of anatomical boundary(GO:0048859)
0.0 0.1 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.0 0.1 GO:1990428 miRNA transport(GO:1990428)
0.0 0.4 GO:0051260 protein homooligomerization(GO:0051260)
0.0 0.1 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.0 0.4 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.3 GO:0018126 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.1 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.0 0.1 GO:0016099 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.0 0.1 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.0 0.1 GO:0034394 protein localization to cell surface(GO:0034394)
0.0 0.2 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.4 GO:0080154 regulation of fertilization(GO:0080154) regulation of double fertilization forming a zygote and endosperm(GO:0080155)
0.0 0.1 GO:0006624 vacuolar protein processing(GO:0006624)
0.0 0.6 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.1 GO:0010481 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.0 0.8 GO:0009690 cytokinin metabolic process(GO:0009690)
0.0 0.1 GO:0097036 regulation of plasma membrane sterol distribution(GO:0097036)
0.0 0.2 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.0 0.2 GO:0006513 protein monoubiquitination(GO:0006513)
0.0 0.1 GO:0080088 spermidine hydroxycinnamate conjugate biosynthetic process(GO:0080088)
0.0 0.1 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.0 0.2 GO:0034063 stress granule assembly(GO:0034063)
0.0 0.3 GO:0060627 regulation of vesicle-mediated transport(GO:0060627)
0.0 0.0 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.0 0.1 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.0 0.3 GO:0015770 sucrose transport(GO:0015770)
0.0 0.1 GO:0016094 polyprenol biosynthetic process(GO:0016094)
0.0 0.1 GO:0002943 tRNA dihydrouridine synthesis(GO:0002943)
0.0 0.1 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.0 0.2 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.0 0.1 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.0 0.1 GO:0072351 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.0 0.3 GO:0030041 actin filament polymerization(GO:0030041)
0.0 0.1 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.0 0.1 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.0 0.1 GO:0055071 manganese ion homeostasis(GO:0055071)
0.0 0.9 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.2 GO:0010039 response to iron ion(GO:0010039)
0.0 1.6 GO:0043413 protein glycosylation(GO:0006486) macromolecule glycosylation(GO:0043413)
0.0 0.0 GO:0051101 regulation of DNA binding(GO:0051101)
0.0 0.1 GO:0030010 establishment of mitotic spindle orientation(GO:0000132) establishment of cell polarity(GO:0030010) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.0 0.3 GO:0009955 adaxial/abaxial pattern specification(GO:0009955)
0.0 0.3 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.1 GO:0048829 root cap development(GO:0048829)
0.0 0.2 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.0 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.0 0.7 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.0 0.2 GO:0007009 plasma membrane organization(GO:0007009)
0.0 0.1 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.0 0.3 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.1 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.0 0.4 GO:2000028 regulation of photoperiodism, flowering(GO:2000028)
0.0 0.1 GO:0048194 Golgi vesicle budding(GO:0048194)
0.0 0.4 GO:0042335 cuticle development(GO:0042335)
0.0 0.1 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.1 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.0 0.1 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.0 0.3 GO:0010582 floral meristem determinacy(GO:0010582)
0.0 0.1 GO:2001289 lipid X metabolic process(GO:2001289)
0.0 0.1 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.1 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.0 0.3 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.4 GO:0050826 response to freezing(GO:0050826)
0.0 0.0 GO:1903338 regulation of cell wall organization or biogenesis(GO:1903338)
0.0 0.0 GO:1902583 multi-organism intracellular transport(GO:1902583)
0.0 0.1 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.0 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.0 0.0 GO:0042539 hypotonic salinity response(GO:0042539)
0.0 0.0 GO:0098609 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.0 0.1 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.1 GO:0016926 protein desumoylation(GO:0016926)
0.0 0.5 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.1 GO:1902025 nitrate import(GO:1902025)
0.0 0.1 GO:0030104 water homeostasis(GO:0030104)
0.0 0.0 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.0 0.1 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.0 0.0 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.0 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.0 0.3 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.2 GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0 0.5 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 0.0 GO:0015669 gas transport(GO:0015669)
0.0 0.1 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.3 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.0 0.2 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 0.3 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.1 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.0 0.3 GO:0071805 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.0 0.1 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.0 0.1 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.0 0.7 GO:0009179 glycolytic process(GO:0006096) ATP generation from ADP(GO:0006757) purine nucleoside diphosphate metabolic process(GO:0009135) purine ribonucleoside diphosphate metabolic process(GO:0009179) ADP metabolic process(GO:0046031)
0.0 0.0 GO:0051031 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0043235 receptor complex(GO:0043235)
0.3 1.0 GO:0016328 lateral plasma membrane(GO:0016328)
0.1 0.4 GO:0009514 glyoxysome(GO:0009514)
0.1 0.4 GO:0000835 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.1 0.7 GO:0090395 plant cell papilla(GO:0090395)
0.1 0.4 GO:0030870 Mre11 complex(GO:0030870)
0.1 0.8 GO:0071256 translocon complex(GO:0071256)
0.1 1.6 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 0.4 GO:0030141 secretory granule(GO:0030141)
0.1 0.3 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.1 0.2 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.1 0.2 GO:0032133 chromosome passenger complex(GO:0032133)
0.1 0.4 GO:0031350 intrinsic component of plastid membrane(GO:0031350) integral component of plastid membrane(GO:0031351)
0.1 0.3 GO:0070552 BRISC complex(GO:0070552)
0.1 0.7 GO:0098827 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.0 0.1 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.0 0.2 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 0.1 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.5 GO:0010168 ER body(GO:0010168)
0.0 0.7 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.4 GO:0055037 recycling endosome(GO:0055037)
0.0 0.2 GO:0030126 COPI vesicle coat(GO:0030126) COPI-coated vesicle membrane(GO:0030663)
0.0 0.2 GO:0000782 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.0 0.2 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.0 0.2 GO:0009897 external side of plasma membrane(GO:0009897)
0.0 0.2 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 0.1 GO:0031417 N-terminal protein acetyltransferase complex(GO:0031414) NatC complex(GO:0031417)
0.0 0.3 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.1 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 0.2 GO:0071818 BAT3 complex(GO:0071818)
0.0 0.3 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.5 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.1 GO:0005775 vacuolar lumen(GO:0005775)
0.0 0.4 GO:0045298 tubulin complex(GO:0045298)
0.0 2.8 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.1 GO:0045334 clathrin-coated endocytic vesicle(GO:0045334)
0.0 0.2 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.3 GO:0000813 ESCRT I complex(GO:0000813)
0.0 1.8 GO:0009527 plastid outer membrane(GO:0009527)
0.0 0.3 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.0 1.0 GO:0005764 lysosome(GO:0005764)
0.0 4.2 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.1 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.0 0.2 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.2 GO:0098576 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.0 2.3 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.1 GO:0043527 tRNA methyltransferase complex(GO:0043527)
0.0 0.2 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.6 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.1 GO:0005828 kinetochore microtubule(GO:0005828)
0.0 0.1 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.0 0.3 GO:0000347 THO complex(GO:0000347)
0.0 0.1 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.0 0.2 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.0 0.1 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.0 0.1 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.0 0.5 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.1 GO:0000439 core TFIIH complex(GO:0000439)
0.0 2.3 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.2 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.0 0.4 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.9 GO:0005811 lipid particle(GO:0005811)
0.0 0.1 GO:0043076 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 0.1 GO:0030897 HOPS complex(GO:0030897)
0.0 0.1 GO:0005876 spindle microtubule(GO:0005876)
0.0 0.1 GO:0009346 citrate lyase complex(GO:0009346)
0.0 0.1 GO:0070652 HAUS complex(GO:0070652)
0.0 1.6 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.2 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.4 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.1 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.0 0.1 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.2 GO:0008180 COP9 signalosome(GO:0008180)
0.0 1.0 GO:0010287 plastoglobule(GO:0010287)
0.0 0.0 GO:0097361 CIA complex(GO:0097361)
0.0 1.0 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.5 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 1.5 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.0 GO:0030896 checkpoint clamp complex(GO:0030896)
0.0 0.1 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 0.1 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 0.0 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 0.0 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.0 0.0 GO:0033185 mannosyltransferase complex(GO:0031501) dolichol-phosphate-mannose synthase complex(GO:0033185)
0.0 0.1 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.0 GO:0030689 Noc complex(GO:0030689)
0.0 0.2 GO:0005689 U12-type spliceosomal complex(GO:0005689)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.2 0.7 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.2 0.7 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.2 0.8 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.2 0.8 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.2 0.7 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.2 0.8 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.2 0.9 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 2.5 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.7 GO:0080139 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.1 0.9 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 1.0 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.4 GO:0008936 nicotinamidase activity(GO:0008936)
0.1 0.4 GO:0047912 galacturonokinase activity(GO:0047912)
0.1 2.5 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.9 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.5 GO:0050162 oxalate oxidase activity(GO:0050162)
0.1 0.3 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.1 0.4 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.1 0.5 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 0.5 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 0.8 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.4 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.1 0.7 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.4 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.1 1.3 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 0.5 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.1 0.4 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.1 0.7 GO:0031177 phosphopantetheine binding(GO:0031177)
0.1 0.5 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.1 0.2 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.1 0.4 GO:0008460 dTDP-glucose 4,6-dehydratase activity(GO:0008460)
0.1 0.2 GO:0008865 hexokinase activity(GO:0004396) fructokinase activity(GO:0008865)
0.1 0.5 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.1 0.3 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.1 1.6 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 0.4 GO:0035197 siRNA binding(GO:0035197)
0.1 0.3 GO:0000009 alpha-1,6-mannosyltransferase activity(GO:0000009)
0.1 0.3 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 0.6 GO:0010011 auxin binding(GO:0010011)
0.1 0.8 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.2 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.1 0.5 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 0.3 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.1 0.6 GO:0002020 protease binding(GO:0002020)
0.1 0.2 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 0.3 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 0.4 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 0.2 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 0.3 GO:0016675 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.1 0.2 GO:0019779 Atg8 activating enzyme activity(GO:0019779)
0.1 0.1 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142)
0.1 0.2 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.1 0.2 GO:0035175 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.1 2.0 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.2 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.1 0.4 GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.1 0.2 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.1 0.2 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.1 1.8 GO:0048029 monosaccharide binding(GO:0048029)
0.1 0.4 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.1 0.3 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.1 0.2 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.1 0.7 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 0.5 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.1 0.4 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.3 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.1 0.2 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 0.2 GO:1990259 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.1 0.2 GO:0004385 guanylate kinase activity(GO:0004385)
0.0 0.7 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.1 GO:0016418 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.0 0.2 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.0 0.1 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.0 GO:0000295 adenine nucleotide transmembrane transporter activity(GO:0000295) purine nucleotide transmembrane transporter activity(GO:0015216)
0.0 0.1 GO:0050263 uridine nucleosidase activity(GO:0045437) ribosylpyrimidine nucleosidase activity(GO:0050263)
0.0 0.2 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.0 0.2 GO:0022840 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.0 0.7 GO:0004743 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.1 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 3.0 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.2 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.0 0.1 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.0 0.3 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.1 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 0.1 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.0 0.1 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.0 0.3 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.0 0.8 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.3 GO:0042299 lupeol synthase activity(GO:0042299)
0.0 0.2 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.2 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 0.2 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.0 0.4 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 0.2 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.0 0.1 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.0 0.3 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 0.1 GO:0019003 GDP binding(GO:0019003)
0.0 0.0 GO:0015180 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.0 0.2 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.0 0.7 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 0.1 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.0 0.9 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.2 GO:0070137 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.0 0.3 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 0.2 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.1 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.0 0.6 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 0.3 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.1 GO:0000035 acyl binding(GO:0000035)
0.0 0.1 GO:0070003 threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.0 0.2 GO:0005221 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.0 0.1 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.0 0.5 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.0 1.0 GO:0008266 poly(U) RNA binding(GO:0008266)
0.0 0.2 GO:0015120 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.0 0.3 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.6 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 0.4 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.0 0.2 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.0 0.1 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.2 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.0 0.1 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.0 0.1 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.0 0.3 GO:0004161 dimethylallyltranstransferase activity(GO:0004161)
0.0 0.1 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.1 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.0 0.5 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.0 0.1 GO:0008481 sphinganine kinase activity(GO:0008481)
0.0 0.1 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.1 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.3 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.4 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0 0.4 GO:0000014 single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.0 0.4 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.3 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.2 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.0 0.1 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.0 0.1 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 0.2 GO:0050551 myrcene synthase activity(GO:0050551)
0.0 0.1 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.0 0.2 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.0 0.6 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.1 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.0 0.2 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.0 0.1 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.0 0.2 GO:0000400 DNA secondary structure binding(GO:0000217) four-way junction DNA binding(GO:0000400)
0.0 0.1 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.4 GO:0004312 fatty acid synthase activity(GO:0004312)
0.0 0.4 GO:0070628 proteasome binding(GO:0070628)
0.0 0.3 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.2 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.1 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.3 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.0 0.8 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 0.4 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.0 GO:0000992 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 3 promoter sequence-specific DNA binding(GO:0001006) RNA polymerase III regulatory region DNA binding(GO:0001016) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.0 0.2 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.3 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 0.1 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.0 0.4 GO:0019905 syntaxin binding(GO:0019905)
0.0 0.9 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.2 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 0.1 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.0 0.3 GO:0015175 neutral amino acid transmembrane transporter activity(GO:0015175)
0.0 0.3 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.6 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.1 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.1 GO:0017108 5'-flap endonuclease activity(GO:0017108) flap endonuclease activity(GO:0048256)
0.0 0.6 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.0 0.2 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.2 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.3 GO:0031593 polyubiquitin binding(GO:0031593)
0.0 0.1 GO:0015292 uniporter activity(GO:0015292)
0.0 0.1 GO:0033862 UMP kinase activity(GO:0033862)
0.0 0.4 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.2 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.1 GO:0016623 oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor(GO:0016623)
0.0 0.2 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.8 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.3 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.3 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.1 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.2 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.1 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.1 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.1 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.0 0.5 GO:0005179 hormone activity(GO:0005179)
0.0 0.3 GO:0008378 galactosyltransferase activity(GO:0008378)
0.0 0.1 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 1.0 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.0 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.0 0.5 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.2 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.2 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.3 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 0.4 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.1 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.0 0.0 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.0 2.1 GO:0008514 organic anion transmembrane transporter activity(GO:0008514)
0.0 0.1 GO:0016433 rRNA (adenine) methyltransferase activity(GO:0016433)
0.0 0.1 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.1 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
0.0 0.0 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.0 0.1 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.3 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.2 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.0 0.3 GO:0010333 terpene synthase activity(GO:0010333)
0.0 0.1 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.1 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.0 0.1 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.2 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.1 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.0 0.1 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.0 0.2 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084)
0.0 0.5 GO:0043022 ribosome binding(GO:0043022)
0.0 0.6 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.2 GO:0008641 small protein activating enzyme activity(GO:0008641)
0.0 0.0 GO:0016435 rRNA (guanine) methyltransferase activity(GO:0016435)
0.0 0.1 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0 0.0 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.0 0.2 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.1 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.0 GO:0051010 microtubule plus-end binding(GO:0051010)
0.0 0.0 GO:0008493 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 0.2 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.1 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.0 0.1 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.0 GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582)
0.0 0.1 GO:0051011 microtubule minus-end binding(GO:0051011)
0.0 0.1 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.4 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.1 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 0.1 GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen(GO:0016713)
0.0 0.1 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 0.1 GO:0008169 C-methyltransferase activity(GO:0008169)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.2 PID RAC1 PATHWAY RAC1 signaling pathway
0.1 0.4 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.1 0.2 PID TCPTP PATHWAY Signaling events mediated by TCPTP
0.1 0.1 PID AP1 PATHWAY AP-1 transcription factor network
0.0 0.1 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.0 0.2 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.0 0.2 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.0 0.1 PID IL12 2PATHWAY IL12-mediated signaling events
0.0 0.3 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.0 0.1 PID S1P S1P1 PATHWAY S1P1 pathway
0.0 0.0 PID PI3KCI PATHWAY Class I PI3K signaling events
0.0 0.1 PID CMYB PATHWAY C-MYB transcription factor network
0.0 0.0 PID HES HEY PATHWAY Notch-mediated HES/HEY network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.2 1.0 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.1 0.5 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.1 0.2 REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS Genes involved in p130Cas linkage to MAPK signaling for integrins
0.1 0.3 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.1 0.4 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 0.2 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.1 0.9 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.2 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.1 0.2 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.0 0.2 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.4 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.2 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.0 0.3 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.0 0.1 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.0 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.0 0.1 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.0 0.1 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.0 0.1 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.0 0.1 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.0 0.0 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.0 0.1 REACTOME POL SWITCHING Genes involved in Polymerase switching