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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G30490

Z-value: 0.72

Transcription factors associated with AT1G30490

Gene Symbol Gene ID Gene Info
AT1G30490
AT1G30490 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
PHVarTal_v1_Chr1_-_10801093_108010930.254.0e-01Click!

Activity profile of AT1G30490 motif

Sorted Z-values of AT1G30490 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_17712290 1.17 AT2G42540.2
AT2G42540.4
AT2G42540.1
AT2G42540.3
COR15A
cold-regulated 15a
Chr1_+_28975255 0.92 AT1G77120.1
ADH1
alcohol dehydrogenase 1
Chr3_+_20612693 0.65 AT3G55580.1
AT3G55580
Regulator of chromosome condensation (RCC1) family protein
Chr4_-_7401951 0.60 AT4G12470.1
AZI1
azelaic acid induced 1
Chr1_-_5765798 0.56 AT1G16850.1
AT1G16850
transmembrane protein
Chr3_-_82182 0.50 AT3G01260.1
AT3G01260
Galactose mutarotase-like superfamily protein
Chr4_+_8827600 0.49 AT4G15430.2
AT4G15430.1
AT4G15430
ERD (early-responsive to dehydration stress) family protein
Chr3_+_2441565 0.48 AT3G07650.4
AT3G07650.1
AT3G07650.3
AT3G07650.2
COL9
CONSTANS-like 9
Chr2_-_18082776 0.47 AT2G43590.1
AT2G43590
Chitinase family protein
Chr4_-_15954803 0.46 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Chr5_-_22115539 0.43 AT5G54470.1
BBX29
B-box type zinc finger family protein
Chr2_+_13987669 0.43 AT2G32960.1
PFA-DSP2
Phosphotyrosine protein phosphatases superfamily protein
Chr4_-_13019400 0.43 AT4G25480.1
DREB1A
dehydration response element B1A
Chr1_-_22871298 0.42 AT1G61890.3
AT1G61890.1
AT1G61890.2
AT1G61890
MATE efflux family protein
Chr1_-_26163715 0.42 AT1G69570.1
AT1G69570
Dof-type zinc finger DNA-binding family protein
Chr2_-_12415661 0.42 AT2G28900.1
OEP16-1
outer plastid envelope protein 16-1
Chr5_-_6725966 0.41 AT5G19890.1
AT5G19890
Peroxidase superfamily protein
Chr4_+_15451988 0.40 AT4G31940.1
CYP82C4
cytochrome P450, family 82, subfamily C, polypeptide 4
Chr4_+_13812989 0.40 AT4G27657.1
AT4G27657
hypothetical protein
Chr3_-_8085669 0.39 AT3G22840.1
ELIP1
Chlorophyll A-B binding family protein
Chr4_-_18551183 0.39 AT4G40010.1
SNRK2.7
SNF1-related protein kinase 2.7
Chr4_-_13001948 0.39 AT4G25433.1
AT4G25433
peptidoglycan-binding LysM domain-containing protein
Chr2_+_6893949 0.38 AT2G15830.1
AT2G15830
hypothetical protein
Chr5_-_5759817 0.36 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr5_+_25040540 0.35 AT5G62360.1
AT5G62360
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_25701770 0.34 AT1G68500.1
AT1G68500
hypothetical protein
Chr2_-_14489767 0.34 AT2G34340.1
AT2G34340
senescence regulator (Protein of unknown function, DUF584)
Chr1_+_18546086 0.34 AT1G50050.2
AT1G50050.1
AT1G50050
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr3_+_2465235 0.33 AT3G07720.1
AT3G07720
Galactose oxidase/kelch repeat superfamily protein
Chr5_-_23117403 0.33 AT5G57110.3
AT5G57110.1
AT5G57110.2
ACA8
autoinhibited Ca2+ -ATPase, isoform 8
Chr5_+_21688763 0.33 AT5G53450.2
AT5G53450.3
AT5G53450.1
ORG1
OBP3-responsive protein 1
Chr5_-_8358546 0.32 AT5G24470.1
PRR5
two-component response regulator-like protein
Chr4_+_12649985 0.32 AT4G24480.2
AT4G24480.1
AT4G24480.3
AT4G24480
Protein kinase superfamily protein
Chr4_+_8646150 0.32 AT4G15160.2
AT4G15160.1
AT4G15160
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_16263805 0.32 AT1G43160.1
RAP2.6
related to AP2 6
Chr5_-_1994824 0.31 AT5G06530.2
AT5G06530.3
AT5G06530.4
AT5G06530.1
ABCG22
ABC-2 type transporter family protein
Chr5_-_3728726 0.31 AT5G11590.1
TINY2
Integrase-type DNA-binding superfamily protein
Chr4_-_12345652 0.31 AT4G23700.2
CHX17
cation/H+ exchanger 17
Chr4_-_12346051 0.30 AT4G23700.1
CHX17
cation/H+ exchanger 17
Chr2_-_14310608 0.30 AT2G33830.2
AT2G33830
Dormancy/auxin associated family protein
Chr4_+_11754912 0.30 AT4G22214.1
AT4G22214
Defensin-like (DEFL) family protein
Chr2_-_14310339 0.30 AT2G33830.1
AT2G33830
Dormancy/auxin associated family protein
Chr4_-_15857440 0.29 AT4G32860.1
AT4G32860
Avr9/Cf-9 rapidly elicited protein
Chr5_+_21771811 0.29 AT5G53590.1
AT5G53590
SAUR-like auxin-responsive protein family
Chr1_+_27538190 0.29 AT1G73220.1
OCT1
organic cation/carnitine transporter1
Chr1_+_3093644 0.28 AT1G09560.1
GLP5
germin-like protein 5
Chr2_+_528179 0.28 AT2G02100.1
LCR69
low-molecular-weight cysteine-rich 69
Chr2_+_873506 0.28 AT2G02990.1
RNS1
ribonuclease 1
Chr2_+_9248525 0.28 AT2G21620.1
AT2G21620.2
RD2
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr5_-_4933620 0.28 AT5G15190.2
AT5G15190.1
AT5G15190
hypothetical protein
Chr1_-_8414886 0.28 AT1G23800.1
AT1G23800.2
ALDH2B7
aldehyde dehydrogenase 2B7
Chr3_+_17268700 0.28 AT3G46900.1
COPT2
copper transporter 2
Chr3_+_17427950 0.27 AT3G47295.1
AT3G47295
hypothetical protein
Chr1_-_6579314 0.27 AT1G19050.1
ARR7
response regulator 7
Chr3_+_8941066 0.27 AT3G24520.1
HSFC1
heat shock transcription factor C1
Chr5_+_4768263 0.27 AT5G14760.1
AO
L-aspartate oxidase
Chr1_-_4651549 0.26 AT1G13600.1
bZIP58
basic leucine-zipper 58
Chr2_-_19287590 0.26 AT2G46940.1
AT2G46940
fold protein
Chr3_-_23046153 0.26 AT3G62270.1
AT3G62270
HCO3- transporter family
Chr3_+_6023844 0.26 AT3G17609.2
AT3G17609.3
AT3G17609.4
AT3G17609.1
HYH
HY5-homolog
Chr5_-_19648362 0.26 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_23182722 0.26 AT3G62680.1
PRP3
proline-rich protein 3
Chr3_-_4834015 0.26 AT3G14440.1
NCED3
nine-cis-epoxycarotenoid dioxygenase 3
Chr4_-_11313709 0.26 AT4G21215.1
AT4G21215.2
AT4G21215
transmembrane protein
Chr1_+_26122080 0.25 AT1G69490.1
NAP
NAC-like, activated by AP3/PI
Chr3_-_20376522 0.25 AT3G54990.1
AT3G54990.2
SMZ
Integrase-type DNA-binding superfamily protein
Chr5_-_5759449 0.25 AT5G17460.4
AT5G17460.5
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr1_-_5194214 0.25 AT1G15100.1
RHA2A
RING-H2 finger A2A
Chr1_+_25016402 0.25 AT1G67030.1
ZFP6
zinc finger protein 6
Chr1_-_10356482 0.24 AT1G29640.1
AT1G29640
senescence regulator (Protein of unknown function, DUF584)
Chr2_-_16690182 0.24 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
Chr5_-_24953232 0.24 AT5G62130.2
AT5G62130.3
AT5G62130.1
AT5G62130.4
AT5G62130
Per1-like family protein
Chr1_-_23511997 0.24 AT1G63410.2
AT1G63410.1
AT1G63410.3
AT1G63410
LURP-one-like protein (DUF567)
Chr4_+_9028262 0.24 AT4G15910.1
DI21
drought-induced 21
Chr5_+_22492892 0.24 AT5G55530.2
AT5G55530.1
AT5G55530
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr1_+_15891281 0.24 AT1G42430.1
AT1G42430.2
AT1G42430
inactive purple acid phosphatase-like protein
Chr5_+_22493103 0.24 AT5G55530.3
AT5G55530
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr4_-_6718550 0.23 AT4G10960.1
UGE5
UDP-D-glucose/UDP-D-galactose 4-epimerase 5
Chr1_+_7610241 0.23 AT1G21670.1
AT1G21670
DPP6 amino-terminal domain protein
Chr5_+_19116719 0.23 AT5G47060.1
AT5G47060.2
AT5G47060
hypothetical protein (DUF581)
Chr3_-_19078955 0.23 AT3G51400.1
AT3G51400
hypothetical protein (DUF241)
Chr1_-_10664570 0.23 AT1G30280.2
AT1G30280.3
AT1G30280.1
AT1G30280
Chaperone DnaJ-domain superfamily protein
Chr3_-_845096 0.23 AT3G03530.1
NPC4
non-specific phospholipase C4
Chr2_+_18537177 0.23 AT2G44940.1
AT2G44940
Integrase-type DNA-binding superfamily protein
Chr1_+_7404328 0.23 AT1G21140.1
AT1G21140
Vacuolar iron transporter (VIT) family protein
Chr3_-_20048190 0.23 AT3G54140.2
PTR1
peptide transporter 1
Chr1_+_1425539 0.23 AT1G05000.3
AT1G05000.1
AT1G05000.2
PFA-DSP1
Phosphotyrosine protein phosphatases superfamily protein
Chr1_+_3919237 0.23 AT1G11655.1
AT1G11655
hypothetical protein
Chr2_+_15056753 0.23 AT2G35850.1
AT2G35850
transmembrane protein
Chr2_-_13373862 0.23 AT2G31360.1
ADS2
16:0delta9 desaturase 2
Chr3_-_4959704 0.23 AT3G14770.1
SWEET2
Nodulin MtN3 family protein
Chr2_-_13374018 0.23 AT2G31360.2
ADS2
16:0delta9 desaturase 2
Chr1_+_2848149 0.22 AT1G08890.1
AT1G08890
Major facilitator superfamily protein
Chr1_+_9259750 0.22 AT1G26770.2
EXPA10
expansin A10
Chr3_-_6564424 0.22 AT3G19030.1
AT3G19030
transcription initiation factor TFIID subunit 1b-like protein
Chr5_+_2132350 0.22 AT5G06860.1
PGIP1
polygalacturonase inhibiting protein 1
Chr5_-_8406132 0.22 AT5G24570.1
AT5G24575.1
AT5G24570
AT5G24575
hypothetical protein
hypothetical protein
Chr3_-_20629093 0.22 AT3G55610.2
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
Chr3_-_21499943 0.22 AT3G58060.1
AT3G58060
Cation efflux family protein
Chr5_+_25248690 0.22 AT5G62900.1
AT5G62900
basic-leucine zipper transcription factor K
Chr3_+_5025184 0.22 AT3G14940.1
PPC3
phosphoenolpyruvate carboxylase 3
Chr1_+_7366775 0.22 AT1G21050.1
AT1G21050
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr3_+_5025383 0.22 AT3G14940.2
PPC3
phosphoenolpyruvate carboxylase 3
Chr1_-_22067076 0.22 AT1G59940.1
ARR3
response regulator 3
Chr3_-_20048745 0.22 AT3G54140.1
PTR1
peptide transporter 1
Chr4_-_13864659 0.22 AT4G27830.1
BGLU10
beta glucosidase 10
Chr3_-_20629295 0.22 AT3G55610.1
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
Chr4_+_14762819 0.22 AT4G30170.1
AT4G30170
Peroxidase family protein
Chr1_-_18238497 0.22 AT1G49310.1
AT1G49310
transmembrane protein
Chr2_+_8426117 0.22 AT2G19450.1
TAG1
membrane bound O-acyl transferase (MBOAT) family protein
Chr5_-_2951701 0.22 AT5G09480.1
AT5G09480
hydroxyproline-rich glycoprotein family protein
Chr2_-_15600154 0.22 AT2G37130.1
AT2G37130
Peroxidase superfamily protein
Chr4_+_1151611 0.22 AT4G02630.1
AT4G02630
Protein kinase superfamily protein
Chr1_+_18932766 0.22 AT1G51090.1
AT1G51090
Heavy metal transport/detoxification superfamily protein
Chr5_-_2359311 0.22 AT5G07450.1
CYCP4%3B3
cyclin p4;3
Chr3_-_7993588 0.21 AT3G22550.1
AT3G22550
NAD(P)H-quinone oxidoreductase subunit, putative (DUF581)
Chr1_+_20516916 0.21 AT1G55010.1
AT1G55010.2
PDF1.5
plant defensin 1.5
Chr1_-_749034 0.21 AT1G03106.1
AT1G03106
hypothetical protein
Chr2_-_2259633 0.21 AT2G05910.1
AT2G05910
LURP-one-like protein (DUF567)
Chr2_-_15599951 0.21 AT2G37130.2
AT2G37130
Peroxidase superfamily protein
Chr1_-_22067233 0.21 AT1G59940.2
ARR3
response regulator 3
Chr1_+_7366590 0.21 AT1G21050.2
AT1G21050
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr2_+_15005064 0.21 AT2G35700.1
ERF38
ERF family protein 38
Chr1_+_18400003 0.21 AT1G49720.1
AT1G49720.2
AT1G49720.3
ABF1
abscisic acid responsive element-binding factor 1
Chr4_+_12376122 0.21 AT4G23750.1
AT4G23750.2
CRF2
cytokinin response factor 2
Chr1_+_18458526 0.21 AT1G49860.1
GSTF14
glutathione S-transferase (class phi) 14
Chr2_+_100484 0.21 AT2G01150.2
AT2G01150.3
AT2G01150.1
RHA2B
RING-H2 finger protein 2B
Chr1_-_27755297 0.21 AT1G73810.1
AT1G73810
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr3_-_11384145 0.21 AT3G29575.1
AT3G29575.4
AT3G29575.3
AFP3
ABI five binding protein 3
Chr3_+_3203988 0.21 AT3G10340.1
PAL4
phenylalanine ammonia-lyase 4
Chr5_-_9011618 0.21 AT5G25840.1
AT5G25840
DUF1677 family protein (DUF1677)
Chr4_-_13864327 0.21 AT4G27830.2
BGLU10
beta glucosidase 10
Chr1_+_9259432 0.21 AT1G26770.1
EXPA10
expansin A10
Chr5_-_23263457 0.21 AT5G57400.1
AT5G57400.2
AT5G57400
transmembrane protein
Chr4_+_18466519 0.21 AT4G39795.1
AT4G39795
hypothetical protein (DUF581)
Chr3_+_5518211 0.21 AT3G16280.2
AT3G16280.1
AT3G16280
Integrase-type DNA-binding superfamily protein
Chr3_+_15983199 0.21 AT3G44300.1
NIT2
nitrilase 2
Chr5_-_9366963 0.21 AT5G26620.1
AT5G26620
hypothetical protein
Chr5_-_19977620 0.21 AT5G49280.1
AT5G49280
hydroxyproline-rich glycoprotein family protein
Chr3_-_21499676 0.20 AT3G58060.2
AT3G58060
Cation efflux family protein
Chr1_-_25622593 0.20 AT1G68360.1
AT1G68360
C2H2 and C2HC zinc fingers superfamily protein
Chr3_+_9295175 0.20 AT3G25585.5
AT3G25585.1
AT3G25585.3
AT3G25585.4
AT3G25585.2
AAPT2
aminoalcoholphosphotransferase
Chr2_+_9841842 0.20 AT2G23120.1
AT2G23120
Late embryogenesis abundant protein, group 6
Chr3_-_20816035 0.20 AT3G56090.1
FER3
ferritin 3
Chr1_-_8535660 0.20 AT1G24130.1
AT1G24130
Transducin/WD40 repeat-like superfamily protein
Chr1_+_846664 0.20 AT1G03420.1
Sadhu4-2

Chr2_-_14677398 0.20 AT2G34790.1
MEE23
FAD-binding Berberine family protein
Chr1_+_4647815 0.20 AT1G13590.1
PSK1
phytosulfokine 1 precursor
Chr3_-_8456708 0.20 AT3G23560.1
AT3G23560.2
ALF5
MATE efflux family protein
Chr2_-_12239124 0.20 AT2G28560.4
AT2G28560.2
AT2G28560.6
AT2G28560.5
AT2G28560.1
RAD51B
DNA repair (Rad51) family protein
Chr3_+_18672906 0.20 AT3G50350.1
AT3G50350
membrane insertase, putative (DUF1685)
Chr2_-_14818211 0.20 AT2G35150.1
EXL7
EXORDIUM like 7
Chr5_-_19291103 0.20 AT5G47560.1
TDT
tonoplast dicarboxylate transporter
Chr4_+_1262245 0.20 AT4G02830.2
AT4G02830.1
AT4G02830.3
AT4G02830
hypothetical protein
Chr4_-_16644928 0.20 AT4G34950.1
AT4G34950
Major facilitator superfamily protein
Chr1_+_920950 0.20 AT1G03700.1
AT1G03700
Uncharacterized protein family (UPF0497)
Chr3_+_5243432 0.20 AT3G15510.1
NAC2
NAC domain containing protein 2
Chr1_-_28442429 0.20 AT1G75750.2
AT1G75750.1
GASA1
GAST1 protein homolog 1
Chr3_+_1795145 0.20 AT3G05980.1
AT3G05980
hypothetical protein
Chr4_+_11773221 0.20 AT4G22270.2
AT4G22270.1
MRB1
transmembrane protein, putative (DUF3537)
Chr5_-_15201168 0.20 AT5G38100.4
AT5G38100.1
AT5G38100.2
AT5G38100
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_16617608 0.20 AT4G34881.1
AT4G34881
transmembrane protein
Chr3_+_6119707 0.20 AT3G17860.4
AT3G17860.1
JAZ3
jasmonate-zim-domain protein 3
Chr5_+_17951442 0.20 AT5G44565.2
AT5G44565.1
AT5G44565.3
AT5G44565
transmembrane protein
Chr1_+_20951856 0.19 AT1G56020.1
AT1G56020
serine/arginine repetitive matrix-like protein
Chr5_-_4620551 0.19 AT5G14330.1
AT5G14330
transmembrane protein
Chr1_+_29387672 0.19 AT1G78100.1
AUF1
F-box family protein
Chr2_-_7496292 0.19 AT2G17230.1
EXL5
EXORDIUM like 5
Chr1_-_20942951 0.19 AT1G55990.1
AT1G55990
glycine-rich protein
Chr3_+_9296047 0.19 AT3G25585.6
AAPT2
aminoalcoholphosphotransferase
Chr4_-_9680389 0.19 AT4G17280.1
AT4G17280
Auxin-responsive family protein
Chr5_-_6591305 0.19 AT5G19530.1
AT5G19530.2
ACL5
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_-_1046993 0.19 AT4G02380.2
AT4G02380.1
AT4G02380.3
SAG21
senescence-associated gene 21
Chr5_+_17987591 0.19 AT5G44590.2
AT5G44590.1
AT5G44590
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_6013018 0.19 AT4G09480.1
AT4G09480

Chr3_+_20700314 0.19 AT3G55760.1
AT3G55760.3
AT3G55760.2
AT3G55760
hypothetical protein
Chr1_+_8049090 0.19 AT1G22740.1
RABG3B
RAB GTPase homolog G3B
Chr3_+_19880504 0.19 AT3G53620.1
PPa4
pyrophosphorylase 4
Chr3_-_17760950 0.19 AT3G48100.1
RR5
response regulator 5
Chr3_-_5327639 0.19 AT3G15720.2
AT3G15720.3
AT3G15720.1
AT3G15720
Pectin lyase-like superfamily protein
Chr4_-_15017365 0.19 AT4G30830.1
AT4G30830
myosin-like protein (Protein of unknown function, DUF593)
Chr2_-_19650287 0.19 AT2G48030.1
AT2G48030.2
AT2G48030
DNAse I-like superfamily protein
Chr5_+_20644525 0.19 AT5G50760.1
AT5G50760
SAUR-like auxin-responsive protein family
Chr1_-_3029549 0.19 AT1G09380.1
UMAMIT25
nodulin MtN21 /EamA-like transporter family protein
Chr2_-_827994 0.19 AT2G02850.1
ARPN
plantacyanin
Chr3_+_6120029 0.19 AT3G17860.3
AT3G17860.2
JAZ3
jasmonate-zim-domain protein 3
Chr4_+_15141068 0.18 AT4G31140.1
AT4G31140
O-Glycosyl hydrolases family 17 protein
Chr2_-_17065813 0.18 AT2G40900.1
UMAMIT11
nodulin MtN21 /EamA-like transporter family protein
Chr5_+_24480291 0.18 AT5G60850.1
OBP4
OBF binding protein 4
Chr1_+_12004854 0.18 AT1G33110.1
AT1G33110.2
AT1G33110
MATE efflux family protein
Chr3_-_4974521 0.18 AT3G14810.1
AT3G14810.2
MSL5
mechanosensitive channel of small conductance-like 5
Chr1_-_19681787 0.18 AT1G52857.1
AT1G52857.2
AT1G52857
transmembrane protein
Chr1_-_11595982 0.18 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
Chr4_-_9583290 0.18 AT4G17030.1
EXLB1
expansin-like B1
Chr3_+_4403355 0.18 AT3G13510.1
AT3G13510
carboxyl-terminal peptidase, putative (DUF239)
Chr5_+_23087122 0.18 AT5G57050.1
AT5G57050.3
AT5G57050.2
ABI2
Protein phosphatase 2C family protein
Chr4_-_1203380 0.18 AT4G02715.1
AT4G02715.2
AT4G02715
flocculation FLO11-like protein
Chr4_-_9250343 0.18 AT4G16370.1
OPT3
oligopeptide transporter
Chr5_+_26671273 0.18 AT5G66800.1
AT5G66800
membrane-associated kinase regulator-like protein
Chr5_+_579744 0.18 AT5G02580.1
AT5G02580.3
AT5G02580.2
AT5G02580
argininosuccinate lyase

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G30490

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.9 GO:0031000 response to caffeine(GO:0031000) response to alkaloid(GO:0043279)
0.1 0.4 GO:0071281 cellular response to iron ion(GO:0071281)
0.1 0.5 GO:0033499 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.1 0.7 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.1 1.1 GO:0009819 drought recovery(GO:0009819)
0.1 0.3 GO:0015696 ammonium transport(GO:0015696)
0.1 0.3 GO:0032196 transposition(GO:0032196)
0.1 0.2 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.1 0.3 GO:0010432 bract development(GO:0010432)
0.1 0.4 GO:0070141 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.1 0.1 GO:0015802 basic amino acid transport(GO:0015802)
0.1 0.2 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.1 0.2 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.1 0.4 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.1 0.4 GO:0043090 amino acid import(GO:0043090)
0.1 0.2 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.1 0.5 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 0.2 GO:1902446 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 0.2 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.1 0.5 GO:0099587 inorganic cation import into cell(GO:0098659) inorganic ion import into cell(GO:0099587)
0.0 0.3 GO:0010148 transpiration(GO:0010148)
0.0 0.2 GO:0000098 sulfur amino acid catabolic process(GO:0000098)
0.0 0.2 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.0 0.3 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.0 0.4 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.0 0.6 GO:0010274 hydrotropism(GO:0010274)
0.0 0.1 GO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.0 0.5 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.1 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.0 0.3 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.0 0.2 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.0 0.4 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.2 GO:0009871 jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway(GO:0009871)
0.0 0.1 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.0 0.1 GO:0010541 acropetal auxin transport(GO:0010541)
0.0 0.1 GO:0071258 cellular response to gravity(GO:0071258)
0.0 0.1 GO:0010288 response to lead ion(GO:0010288)
0.0 1.0 GO:0009269 response to desiccation(GO:0009269)
0.0 0.1 GO:0009915 phloem sucrose loading(GO:0009915)
0.0 0.3 GO:0080187 floral organ senescence(GO:0080187)
0.0 0.3 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.0 0.1 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.0 0.0 GO:0002009 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.0 0.1 GO:0030417 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.0 0.1 GO:1903889 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.0 0.2 GO:0048830 adventitious root development(GO:0048830)
0.0 0.1 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.0 0.2 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.0 0.3 GO:0009942 longitudinal axis specification(GO:0009942)
0.0 0.2 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.0 0.1 GO:0051196 regulation of coenzyme metabolic process(GO:0051196)
0.0 0.0 GO:0010351 lithium ion transport(GO:0010351)
0.0 0.1 GO:0019406 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.0 0.2 GO:0010451 regulation of floral meristem growth(GO:0010080) floral meristem growth(GO:0010451)
0.0 0.1 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.0 0.2 GO:0046208 spermine catabolic process(GO:0046208)
0.0 0.1 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.0 0.1 GO:1990882 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.0 0.1 GO:0006527 arginine catabolic process(GO:0006527)
0.0 0.1 GO:0010450 inflorescence meristem growth(GO:0010450)
0.0 0.1 GO:0071836 nectar secretion(GO:0071836)
0.0 0.1 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.0 0.1 GO:0042766 nucleosome mobilization(GO:0042766)
0.0 0.1 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.0 0.1 GO:0000491 small nucleolar ribonucleoprotein complex assembly(GO:0000491)
0.0 0.3 GO:0006308 DNA catabolic process(GO:0006308)
0.0 0.1 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.0 0.1 GO:0034389 lipid particle organization(GO:0034389)
0.0 0.1 GO:0048462 carpel formation(GO:0048462)
0.0 0.5 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.3 GO:0000966 RNA 5'-end processing(GO:0000966)
0.0 0.6 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.4 GO:0080060 integument development(GO:0080060)
0.0 0.1 GO:1990532 stress response to nickel ion(GO:1990532)
0.0 0.3 GO:0010358 leaf shaping(GO:0010358)
0.0 0.4 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 0.4 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 0.1 GO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.0 0.1 GO:0016139 glycoside catabolic process(GO:0016139)
0.0 0.1 GO:0015824 proline transport(GO:0015824)
0.0 0.1 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.2 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.0 0.2 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.1 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.0 0.3 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.0 0.1 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.0 0.1 GO:0006624 vacuolar protein processing(GO:0006624)
0.0 0.1 GO:0010480 microsporocyte differentiation(GO:0010480)
0.0 0.1 GO:0010271 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.0 0.1 GO:0080171 lytic vacuole organization(GO:0080171)
0.0 0.1 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.0 0.1 GO:0010377 guard cell fate commitment(GO:0010377) response to low humidity(GO:0090547)
0.0 0.6 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.0 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.0 1.6 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.1 GO:0030970 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.0 0.1 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.0 0.1 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.1 GO:0080168 abscisic acid transport(GO:0080168)
0.0 0.1 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.0 0.1 GO:0097502 mannosylation(GO:0097502)
0.0 0.1 GO:0006666 3-keto-sphinganine metabolic process(GO:0006666)
0.0 0.1 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.0 0.4 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.0 0.1 GO:0030100 regulation of endocytosis(GO:0030100)
0.0 0.2 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.1 GO:0006420 arginyl-tRNA aminoacylation(GO:0006420)
0.0 0.2 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.0 0.3 GO:0009684 indoleacetic acid biosynthetic process(GO:0009684)
0.0 0.3 GO:1902074 response to salt(GO:1902074)
0.0 0.1 GO:0010117 photoprotection(GO:0010117)
0.0 0.1 GO:0003400 regulation of COPII vesicle coating(GO:0003400) regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis(GO:0090113)
0.0 0.2 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.0 0.1 GO:1902932 positive regulation of alcohol biosynthetic process(GO:1902932)
0.0 0.2 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.0 0.2 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380)
0.0 0.2 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.2 GO:0009610 response to symbiotic fungus(GO:0009610)
0.0 0.2 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.2 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.0 0.2 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.0 0.1 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.0 0.1 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.0 0.6 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.0 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.0 0.3 GO:0048829 root cap development(GO:0048829)
0.0 0.1 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.4 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.0 0.1 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.0 GO:0034982 mitochondrial protein processing(GO:0034982)
0.0 0.4 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.1 GO:0009298 GDP-mannose biosynthetic process(GO:0009298)
0.0 0.0 GO:0030030 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.0 0.1 GO:0070509 calcium ion import(GO:0070509)
0.0 0.1 GO:0005980 glycogen catabolic process(GO:0005980)
0.0 0.0 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.0 0.1 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.2 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.0 0.0 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.0 0.0 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.0 0.1 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.0 0.3 GO:0006949 syncytium formation(GO:0006949)
0.0 0.0 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.0 0.0 GO:0042908 xenobiotic transport(GO:0042908)
0.0 0.0 GO:0009663 plasmodesma organization(GO:0009663)
0.0 0.1 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.0 0.3 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.0 GO:0040019 positive regulation of embryonic development(GO:0040019)
0.0 0.2 GO:0017157 regulation of exocytosis(GO:0017157)
0.0 0.0 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 0.1 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.0 0.1 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.0 0.8 GO:0006885 regulation of pH(GO:0006885)
0.0 0.1 GO:0046621 negative regulation of organ growth(GO:0046621)
0.0 0.1 GO:0061727 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.1 GO:0033386 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.0 0.0 GO:0090207 regulation of triglyceride metabolic process(GO:0090207)
0.0 0.1 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.5 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 0.0 GO:0015784 GDP-fucose transport(GO:0015783) GDP-mannose transport(GO:0015784) purine-containing compound transmembrane transport(GO:0072530) purine nucleotide-sugar transmembrane transport(GO:0090480) GDP-mannose transmembrane transport(GO:1990570)
0.0 0.1 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.0 0.1 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.0 0.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.2 GO:0009556 microsporogenesis(GO:0009556)
0.0 0.2 GO:0051865 protein autoubiquitination(GO:0051865)
0.0 0.2 GO:0010039 response to iron ion(GO:0010039)
0.0 0.0 GO:1901334 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.0 0.5 GO:0051170 nuclear import(GO:0051170)
0.0 0.1 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.0 GO:0015800 acidic amino acid transport(GO:0015800)
0.0 0.3 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.1 GO:0016553 base conversion or substitution editing(GO:0016553)
0.0 0.1 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.2 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 0.1 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.0 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.0 0.0 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.0 0.1 GO:0009880 embryonic pattern specification(GO:0009880)
0.0 0.1 GO:2000757 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.0 0.3 GO:0009395 phospholipid catabolic process(GO:0009395)
0.0 0.2 GO:0035265 organ growth(GO:0035265)
0.0 0.0 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.0 0.2 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.1 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.0 0.0 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.0 0.1 GO:0018210 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.0 0.1 GO:0050665 hydrogen peroxide biosynthetic process(GO:0050665)
0.0 0.3 GO:0009825 multidimensional cell growth(GO:0009825)
0.0 0.1 GO:0005513 detection of calcium ion(GO:0005513)
0.0 0.0 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.0 0.1 GO:0048766 root hair initiation(GO:0048766)
0.0 0.1 GO:0071490 cellular response to far red light(GO:0071490)
0.0 0.1 GO:0080121 AMP transport(GO:0080121)
0.0 0.2 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 0.0 GO:0035305 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.0 0.0 GO:0006620 posttranslational protein targeting to membrane(GO:0006620)
0.0 0.2 GO:0080155 regulation of fertilization(GO:0080154) regulation of double fertilization forming a zygote and endosperm(GO:0080155)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0030874 nucleolar chromatin(GO:0030874)
0.0 0.2 GO:0070505 pollen coat(GO:0070505)
0.0 0.3 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.0 0.2 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 0.1 GO:0016328 lateral plasma membrane(GO:0016328)
0.0 0.1 GO:0009513 etioplast(GO:0009513)
0.0 0.4 GO:0071782 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.0 0.1 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.5 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.1 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.0 0.1 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 0.4 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.3 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 0.1 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 0.1 GO:0000835 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.0 0.1 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.0 0.1 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.0 0.1 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.0 0.1 GO:0090397 stigma papilla(GO:0090397)
0.0 0.4 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.1 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.0 0.1 GO:0009501 amyloplast(GO:0009501)
0.0 1.0 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.1 GO:0070390 transcription export complex 2(GO:0070390)
0.0 0.1 GO:0055038 recycling endosome membrane(GO:0055038)
0.0 0.0 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.0 0.1 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.0 0.1 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 0.1 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.1 GO:0031083 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 0.1 GO:0071818 BAT3 complex(GO:0071818)
0.0 0.4 GO:1903293 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 0.1 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.0 0.1 GO:0098852 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.1 GO:0005845 mRNA cap binding complex(GO:0005845)
0.0 0.0 GO:0097196 Shu complex(GO:0097196)
0.0 0.1 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.2 0.5 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 0.8 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.4 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.1 0.3 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.1 0.4 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.1 0.3 GO:0042577 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.1 0.3 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.1 0.3 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 0.1 GO:0008309 double-stranded DNA exodeoxyribonuclease activity(GO:0008309)
0.1 0.3 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.1 0.3 GO:0000150 recombinase activity(GO:0000150)
0.1 0.4 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 0.1 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.1 0.2 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.1 0.3 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.2 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.2 GO:0008936 nicotinamidase activity(GO:0008936)
0.1 1.6 GO:0048029 monosaccharide binding(GO:0048029)
0.0 0.2 GO:0035197 siRNA binding(GO:0035197)
0.0 0.4 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.0 0.1 GO:0016504 peptidase activator activity(GO:0016504)
0.0 0.1 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.0 0.2 GO:0004322 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.0 0.2 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.0 0.2 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.0 0.1 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 0.2 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.0 1.5 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.2 GO:0016768 spermine synthase activity(GO:0016768)
0.0 0.3 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.1 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.0 0.5 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.0 0.1 GO:0008460 dTDP-glucose 4,6-dehydratase activity(GO:0008460)
0.0 0.2 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.0 0.2 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.3 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.0 0.1 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.0 0.2 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.0 0.1 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.0 0.1 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.0 0.1 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.0 0.1 GO:0032791 lead ion binding(GO:0032791)
0.0 0.3 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.1 GO:0009784 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.0 0.2 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.0 0.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.5 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.2 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.4 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.1 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.0 0.2 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 1.0 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.0 0.1 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.0 0.4 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.1 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.0 0.1 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.0 0.1 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.0 0.2 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.0 0.1 GO:0022840 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.0 0.1 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.0 0.5 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.1 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.0 0.6 GO:0004568 chitinase activity(GO:0004568)
0.0 0.1 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.0 0.1 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.0 0.0 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142)
0.0 0.1 GO:0047560 3-dehydrosphinganine reductase activity(GO:0047560)
0.0 0.1 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.0 0.1 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.0 0.1 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.0 0.1 GO:0004814 arginine-tRNA ligase activity(GO:0004814)
0.0 0.1 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.0 0.6 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.1 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.0 0.1 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.2 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.4 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.1 GO:0070547 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.0 0.1 GO:0010011 auxin binding(GO:0010011)
0.0 0.1 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 0.1 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.0 0.1 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.1 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.0 0.0 GO:0031543 peptidyl-proline dioxygenase activity(GO:0031543)
0.0 0.1 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.0 0.2 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 0.1 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.0 0.1 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.0 0.0 GO:0010334 sesquiterpene synthase activity(GO:0010334)
0.0 0.1 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 0.1 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.0 0.2 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.1 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.0 0.1 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 0.1 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.1 GO:0015002 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 1.0 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.2 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.0 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.0 0.1 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.0 0.2 GO:0016157 sucrose synthase activity(GO:0016157)
0.0 0.1 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.0 0.2 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.1 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.1 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.0 0.6 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.1 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.0 0.0 GO:0033549 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017) MAP kinase phosphatase activity(GO:0033549)
0.0 0.1 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.0 0.1 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 0.8 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.1 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.0 0.3 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.0 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.0 0.1 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 0.8 GO:0043621 protein self-association(GO:0043621)
0.0 0.0 GO:0004113 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.0 0.0 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.0 0.0 GO:0019534 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 0.1 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.0 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.2 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.1 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.1 GO:0032041 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.1 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 0.2 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.0 0.1 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.3 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.1 GO:0015101 organic cation transmembrane transporter activity(GO:0015101) AMP transmembrane transporter activity(GO:0080122)
0.0 0.1 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 0.2 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.5 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 PID INTEGRIN1 PATHWAY Beta1 integrin cell surface interactions
0.0 0.5 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.0 0.2 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.0 0.2 PID MTOR 4PATHWAY mTOR signaling pathway
0.0 0.1 PID TCPTP PATHWAY Signaling events mediated by TCPTP
0.0 0.1 ST INTEGRIN SIGNALING PATHWAY Integrin Signaling Pathway
0.0 0.1 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.0 0.2 PID RAC1 PATHWAY RAC1 signaling pathway
0.0 0.1 PID PTP1B PATHWAY Signaling events mediated by PTP1B
0.0 0.1 ST B CELL ANTIGEN RECEPTOR B Cell Antigen Receptor
0.0 0.1 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.0 0.1 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.1 0.1 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.1 0.2 REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
0.0 0.3 REACTOME SIGNALING BY PDGF Genes involved in Signaling by PDGF
0.0 0.1 REACTOME POTASSIUM CHANNELS Genes involved in Potassium Channels
0.0 0.1 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.0 0.1 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.0 0.0 REACTOME G ALPHA1213 SIGNALLING EVENTS Genes involved in G alpha (12/13) signalling events
0.0 0.4 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.2 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.0 0.1 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.0 0.0 REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION Genes involved in Cyclin E associated events during G1/S transition
0.0 0.1 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.0 0.1 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation