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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G29160

Z-value: 1.19

Transcription factors associated with AT1G29160

Gene Symbol Gene ID Gene Info
AT1G29160 Dof-type zinc finger DNA-binding family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT1G29160arTal_v1_Chr1_-_10184512_101845120.714.2e-03Click!

Activity profile of AT1G29160 motif

Sorted Z-values of AT1G29160 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_14753088 1.81 AT5G37260.1
Homeodomain-like superfamily protein
Chr4_-_7401951 1.78 AT4G12470.1
azelaic acid induced 1
Chr5_+_21240717 1.77 AT5G52310.1
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
Chr3_+_4104463 1.76 AT3G12900.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_+_538250 1.64 AT2G02120.1
Scorpion toxin-like knottin superfamily protein
Chr5_+_5205869 1.61 AT5G15950.1
Adenosylmethionine decarboxylase family protein
Chr5_+_5206156 1.60 AT5G15950.2
Adenosylmethionine decarboxylase family protein
Chr1_-_9275193 1.57 AT1G26790.1
Dof-type zinc finger DNA-binding family protein
Chr5_+_20151163 1.40 AT5G49640.1
hypothetical protein
Chr4_-_15954803 1.27 AT4G33070.1
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Chr2_-_12343443 1.16 AT2G28780.1
P-hydroxybenzoic acid efflux pump subunit
Chr3_-_2569700 1.12 AT3G08040.2
AT3G08040.1
MATE efflux family protein
Chr3_+_18940643 1.11 AT3G50970.1
dehydrin family protein
Chr3_+_2441565 1.11 AT3G07650.4
AT3G07650.1
AT3G07650.3
AT3G07650.2
CONSTANS-like 9
Chr1_-_10475969 1.07 AT1G29920.1
chlorophyll A/B-binding protein 2
Chr4_+_9028262 1.06 AT4G15910.1
drought-induced 21
Chr2_+_6893949 1.05 AT2G15830.1
hypothetical protein
Chr1_-_26163715 1.04 AT1G69570.1
Dof-type zinc finger DNA-binding family protein
Chr1_-_16917053 1.04 AT1G44800.1
nodulin MtN21 /EamA-like transporter family protein
Chr1_-_3481041 1.01 AT1G10550.1
xyloglucan:xyloglucosyl transferase 33
Chr2_+_2026162 1.01 AT2G05520.4
AT2G05520.5
AT2G05520.6
AT2G05520.3
glycine-rich protein 3
Chr1_-_4651549 1.01 AT1G13600.1
basic leucine-zipper 58
Chr2_+_12004658 1.00 AT2G28160.1
AT2G28160.2
FER-like regulator of iron uptake
Chr1_+_6763765 1.00 AT1G19530.1
AT1G19530.2
DNA polymerase epsilon catalytic subunit A
Chr2_+_15106940 0.99 AT2G35960.1
NDR1/HIN1-like 12
Chr5_-_19648362 0.99 AT5G48490.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_1966806 0.99 AT2G05380.1
AT2G05380.2
glycine-rich protein 3 short isoform
Chr1_+_27538190 0.98 AT1G73220.1
organic cation/carnitine transporter1
Chr2_+_1966610 0.97 AT2G05380.3
glycine-rich protein 3 short isoform
Chr1_+_5872024 0.95 AT1G17180.1
glutathione S-transferase TAU 25
Chr2_+_2025991 0.94 AT2G05520.2
AT2G05520.1
glycine-rich protein 3
Chr5_-_7054281 0.94 AT5G20830.3
sucrose synthase 1
Chr1_-_30186716 0.94 AT1G80280.1
alpha/beta-Hydrolases superfamily protein
Chr5_-_7054713 0.93 AT5G20830.1
sucrose synthase 1
Chr3_-_23046153 0.92 AT3G62270.1
HCO3- transporter family
Chr1_+_22198266 0.92 AT1G60190.1
ARM repeat superfamily protein
Chr4_-_13001948 0.92 AT4G25433.1
peptidoglycan-binding LysM domain-containing protein
Chr5_-_7055398 0.91 AT5G20830.2
sucrose synthase 1
Chr3_-_489467 0.91 AT3G02380.1
CONSTANS-like 2
Chr2_+_528179 0.90 AT2G02100.1
low-molecular-weight cysteine-rich 69
Chr4_+_12827856 0.90 AT4G24960.1
AT4G24960.3
AT4G24960.2
HVA22 homologue D
Chr1_-_22280593 0.89 AT1G60470.1
galactinol synthase 4
Chr4_-_7410406 0.89 AT4G12490.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_17457614 0.87 AT3G47380.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_+_2657054 0.87 AT5G08260.1
serine carboxypeptidase-like 35
Chr5_-_1994824 0.86 AT5G06530.2
AT5G06530.3
AT5G06530.4
AT5G06530.1
ABC-2 type transporter family protein
Chr1_+_28498821 0.86 AT1G75900.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_28442429 0.84 AT1G75750.2
AT1G75750.1
GAST1 protein homolog 1
Chr5_+_15878698 0.84 AT5G39660.1
AT5G39660.3
AT5G39660.2
cycling DOF factor 2
Chr2_+_13381767 0.84 AT2G31380.1
salt tolerance homologue
Chr2_-_6983777 0.84 AT2G16060.1
hemoglobin 1
Chr5_-_19563832 0.84 AT5G48250.1
B-box type zinc finger protein with CCT domain-containing protein
Chr1_-_507268 0.84 AT1G02460.1
Pectin lyase-like superfamily protein
Chr3_+_2176788 0.82 AT3G06890.1
transmembrane protein
Chr1_-_17266724 0.82 AT1G46768.3
AT1G46768.2
AT1G46768.1
related to AP2 1
Chr5_-_18193328 0.80 AT5G45080.1
phloem protein 2-A6
Chr5_-_22115539 0.80 AT5G54470.1
B-box type zinc finger family protein
Chr1_-_3756998 0.79 AT1G11210.1
cotton fiber protein, putative (DUF761)
Chr1_+_4647815 0.79 AT1G13590.1
phytosulfokine 1 precursor
Chr1_+_25701770 0.79 AT1G68500.1
hypothetical protein
Chr5_-_18189523 0.78 AT5G45070.1
phloem protein 2-A8
Chr3_+_4449259 0.77 AT3G13610.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_+_3923735 0.77 AT3G12320.2
hypothetical protein
Chr3_+_3923515 0.75 AT3G12320.1
hypothetical protein
Chr3_-_6564424 0.74 AT3G19030.1
transcription initiation factor TFIID subunit 1b-like protein
Chr2_+_13987669 0.73 AT2G32960.1
Phosphotyrosine protein phosphatases superfamily protein
Chr3_+_5025383 0.73 AT3G14940.2
phosphoenolpyruvate carboxylase 3
Chr3_+_8172479 0.72 AT3G23000.1
CBL-interacting protein kinase 7
Chr3_+_5025184 0.72 AT3G14940.1
phosphoenolpyruvate carboxylase 3
Chr5_+_17951442 0.72 AT5G44565.2
AT5G44565.1
AT5G44565.3
transmembrane protein
Chr3_+_3923969 0.72 AT3G12320.3
hypothetical protein
Chr5_-_15201168 0.71 AT5G38100.4
AT5G38100.1
AT5G38100.2
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_+_8541713 0.71 AT5G24860.3
AT5G24860.1
flowering promoting factor 1
Chr1_-_11719988 0.71 AT1G32450.1
nitrate transporter 1.5
Chr5_+_22388782 0.70 AT5G55180.2
O-Glycosyl hydrolases family 17 protein
Chr5_-_5759817 0.70 AT5G17460.3
AT5G17460.2
AT5G17460.1
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr5_+_4826141 0.70 AT5G14920.1
AT5G14920.2
Gibberellin-regulated family protein
Chr3_-_21650347 0.69 AT3G58550.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_8687188 0.69 AT5G25160.1
zinc finger protein 3
Chr5_+_22388521 0.69 AT5G55180.1
O-Glycosyl hydrolases family 17 protein
Chr1_-_18238497 0.68 AT1G49310.1
transmembrane protein
Chr4_+_10498748 0.67 AT4G19200.1
proline-rich family protein
Chr4_+_994726 0.67 AT4G02280.1
sucrose synthase 3
Chr3_-_19078955 0.67 AT3G51400.1
hypothetical protein (DUF241)
Chr4_+_10521259 0.67 AT4G19230.1
AT4G19230.2
cytochrome P450, family 707, subfamily A, polypeptide 1
Chr3_-_21103719 0.67 AT3G57030.1
Calcium-dependent phosphotriesterase superfamily protein
Chr1_+_21868190 0.67 AT1G59530.1
basic leucine-zipper 4
Chr2_+_10244745 0.66 AT2G24100.1
ATP-dependent DNA helicase
Chr3_+_1593668 0.66 AT3G05500.2
Rubber elongation factor protein (REF)
Chr3_+_11810726 0.66 AT3G30180.1
brassinosteroid-6-oxidase 2
Chr4_-_5456100 0.65 AT4G08570.1
Heavy metal transport/detoxification superfamily protein
Chr5_+_22721373 0.65 AT5G56120.1
RNA polymerase II elongation factor
Chr2_-_17202848 0.65 AT2G41250.1
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_+_25248690 0.65 AT5G62900.1
basic-leucine zipper transcription factor K
Chr3_+_5720941 0.65 AT3G16800.5
AT3G16800.4
AT3G16800.2
AT3G16800.6
AT3G16800.1
Protein phosphatase 2C family protein
Chr3_-_19063538 0.65 AT3G51350.1
Eukaryotic aspartyl protease family protein
Chr4_-_2413447 0.65 AT4G04745.1
hypothetical protein
Chr5_-_17022723 0.65 AT5G42570.1
B-cell receptor-associated 31-like protein
Chr5_-_23685805 0.65 AT5G58600.2
AT5G58600.1
Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein (DUF828)
Chr5_-_25866972 0.64 AT5G64700.2
AT5G64700.1
nodulin MtN21 /EamA-like transporter family protein
Chr5_-_18547205 0.64 AT5G45720.2
AT5G45720.1
AAA-type ATPase family protein
Chr4_-_16285229 0.64 AT4G33980.1
hypothetical protein
Chr3_+_1593182 0.64 AT3G05500.1
Rubber elongation factor protein (REF)
Chr5_+_4768263 0.64 AT5G14760.1
L-aspartate oxidase
Chr5_+_5092140 0.64 AT5G15650.1
reversibly glycosylated polypeptide 2
Chr3_-_2825114 0.63 AT3G09200.2
AT3G09200.1
Ribosomal protein L10 family protein
Chr4_-_16285059 0.63 AT4G33980.2
hypothetical protein
Chr1_+_5638779 0.63 AT1G16500.1
filamentous hemagglutinin transporter
Chr4_+_18413775 0.63 AT4G39675.1
hypothetical protein
Chr2_-_12785037 0.62 AT2G29980.2
fatty acid desaturase 3
Chr3_-_20939631 0.62 AT3G56480.1
myosin heavy chain-like protein
Chr2_-_12785190 0.62 AT2G29980.1
fatty acid desaturase 3
Chr1_-_22417244 0.62 AT1G60890.2
AT1G60890.1
Phosphatidylinositol-4-phosphate 5-kinase family protein
Chr2_+_9126263 0.61 AT2G21320.1
B-box zinc finger family protein
Chr2_-_5675995 0.61 AT2G13610.1
ABC-2 type transporter family protein
Chr4_-_14117367 0.60 AT4G28560.1
ROP-interactive CRIB motif-containing protein 7
Chr3_+_19825267 0.60 AT3G53480.1
pleiotropic drug resistance 9
Chr3_+_22635803 0.60 AT3G61160.3
AT3G61160.6
AT3G61160.5
AT3G61160.4
AT3G61160.2
AT3G61160.1
Protein kinase superfamily protein
Chr3_+_9475350 0.59 AT3G25890.2
AT3G25890.1
Integrase-type DNA-binding superfamily protein
Chr3_-_4739136 0.59 AT3G14230.1
AT3G14230.3
related to AP2 2
Chr5_-_25967393 0.58 AT5G65000.2
AT5G65000.1
Nucleotide-sugar transporter family protein
Chr1_-_18753941 0.58 AT1G50630.1
AT1G50630.2
extracellular ligand-gated ion channel protein (DUF3537)
Chr1_+_28756521 0.58 AT1G76620.1
AT1G76620.2
Serine/Threonine-kinase, putative (Protein of unknown function, DUF547)
Chr1_-_22871298 0.58 AT1G61890.3
AT1G61890.1
AT1G61890.2
MATE efflux family protein
Chr1_-_4243201 0.58 AT1G12440.1
AT1G12440.3
A20/AN1-like zinc finger family protein
Chr3_-_4739298 0.58 AT3G14230.2
related to AP2 2
Chr5_-_7385833 0.58 AT5G22310.1
trichohyalin-like protein
Chr1_-_4242963 0.58 AT1G12440.2
A20/AN1-like zinc finger family protein
Chr1_-_10184512 0.57 AT1G29160.1
Dof-type zinc finger DNA-binding family protein
Chr3_+_6023844 0.57 AT3G17609.2
AT3G17609.3
AT3G17609.4
AT3G17609.1
HY5-homolog
Chr4_-_407142 0.57 AT4G00950.1
hypothetical protein (DUF688)
Chr2_+_100484 0.57 AT2G01150.2
AT2G01150.3
AT2G01150.1
RING-H2 finger protein 2B
Chr1_+_1425539 0.57 AT1G05000.3
AT1G05000.1
AT1G05000.2
Phosphotyrosine protein phosphatases superfamily protein
Chr1_-_156011 0.57 AT1G01420.1
UDP-glucosyl transferase 72B3
Chr3_-_7808046 0.57 AT3G22142.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_11401118 0.57 AT2G26760.1
Cyclin B1;4
Chr5_+_22492892 0.57 AT5G55530.2
AT5G55530.1
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr1_-_6904155 0.57 AT1G19880.1
Regulator of chromosome condensation (RCC1) family protein
Chr1_-_156178 0.56 AT1G01420.2
UDP-glucosyl transferase 72B3
Chr5_-_26816761 0.56 AT5G67200.1
Leucine-rich repeat protein kinase family protein
Chr2_+_17165191 0.56 AT2G41180.1
VQ motif-containing protein
Chr5_+_3536189 0.56 AT5G11110.1
sucrose phosphate synthase 2F
Chr3_+_15983199 0.56 AT3G44300.1
nitrilase 2
Chr5_+_17526660 0.55 AT5G43630.2
AT5G43630.1
AT5G43630.3
AT5G43630.4
zinc knuckle (CCHC-type) family protein
Chr5_+_20949291 0.55 AT5G51570.1
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr3_-_4974521 0.55 AT3G14810.1
AT3G14810.2
mechanosensitive channel of small conductance-like 5
Chr1_-_19246010 0.55 AT1G51830.1
AT1G51830.2
Leucine-rich repeat protein kinase family protein
Chr4_-_6718550 0.55 AT4G10960.1
UDP-D-glucose/UDP-D-galactose 4-epimerase 5
Chr1_-_5194214 0.55 AT1G15100.1
RING-H2 finger A2A
Chr3_+_10576961 0.55 AT3G28310.1
hypothetical protein (DUF677)
Chr4_+_8646150 0.54 AT4G15160.2
AT4G15160.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_25978439 0.54 AT5G65040.1
senescence-associated family protein (DUF581)
Chr4_+_9865103 0.54 AT4G17730.2
AT4G17730.1
syntaxin of plants 23
Chr3_+_18249663 0.54 AT3G49220.2
AT3G49220.3
AT3G49220.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_-_19361162 0.54 AT2G47160.2
HCO3- transporter family
Chr1_-_12745748 0.54 AT1G34760.1
AT1G34760.2
general regulatory factor 11
Chr1_+_7404328 0.54 AT1G21140.1
Vacuolar iron transporter (VIT) family protein
Chr3_+_5721225 0.53 AT3G16800.3
Protein phosphatase 2C family protein
Chr5_+_22493103 0.53 AT5G55530.3
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr2_-_19361328 0.53 AT2G47160.1
HCO3- transporter family
Chr1_+_28829243 0.53 AT1G76800.1
Vacuolar iron transporter (VIT) family protein
Chr5_-_17421982 0.53 AT5G43380.1
AT5G43380.2
AT5G43380.3
type one serine/threonine protein phosphatase 6
Chr1_+_29413874 0.53 AT1G78170.1
E3 ubiquitin-protein ligase
Chr1_-_18360426 0.53 AT1G49600.2
AT1G49600.1
AT1G49600.3
RNA-binding protein 47A
Chr1_-_8414886 0.53 AT1G23800.1
AT1G23800.2
aldehyde dehydrogenase 2B7
Chr4_+_18160903 0.53 AT4G38960.2
AT4G38960.6
AT4G38960.5
AT4G38960.1
AT4G38960.4
B-box type zinc finger family protein
Chr2_-_15599951 0.52 AT2G37130.2
Peroxidase superfamily protein
Chr1_-_11595982 0.52 AT1G32190.2
AT1G32190.1
alpha/beta-Hydrolases superfamily protein
Chr5_-_21337002 0.52 AT5G52570.2
AT5G52570.1
beta-carotene hydroxylase 2
Chr2_+_8183638 0.52 AT2G18890.1
AT2G18890.3
Protein kinase superfamily protein
Chr1_+_29759030 0.52 AT1G79110.2
AT1G79110.3
AT1G79110.1
zinc ion binding protein
Chr4_+_18034363 0.52 AT4G38580.2
farnesylated protein 6
Chr1_-_9451768 0.52 AT1G27200.1
glycosyltransferase family protein (DUF23)
Chr1_+_9259432 0.52 AT1G26770.1
expansin A10
Chr5_-_5862462 0.52 AT5G17760.2
AT5G17760.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_484256 0.51 AT3G02370.1
AT3G02370.4
AT3G02370.2
AT3G02370.3
tRNA-splicing endonuclease subunit
Chr4_+_18034131 0.51 AT4G38580.1
farnesylated protein 6
Chr4_-_18206684 0.51 AT4G39070.1
B-box zinc finger family protein
Chr3_-_4834015 0.51 AT3G14440.1
nine-cis-epoxycarotenoid dioxygenase 3
Chr2_+_17226948 0.51 AT2G41330.1
Glutaredoxin family protein
Chr2_-_15600154 0.51 AT2G37130.1
Peroxidase superfamily protein
Chr1_-_3880391 0.51 AT1G11545.1
xyloglucan endotransglucosylase/hydrolase 8
Chr4_-_18098633 0.51 AT4G38770.1
proline-rich protein 4
Chr1_-_21580766 0.51 AT1G58235.1
hypothetical protein
Chr3_-_20903080 0.51 AT3G56370.1
Leucine-rich repeat protein kinase family protein
Chr5_-_10092686 0.51 AT5G28080.7
AT5G28080.1
AT5G28080.6
AT5G28080.2
AT5G28080.5
AT5G28080.3
AT5G28080.4
AT5G28080.8
Protein kinase superfamily protein
Chr1_-_20156520 0.50 AT1G54000.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_+_6673874 0.50 AT5G19740.1
Peptidase M28 family protein
Chr3_+_16138375 0.50 AT3G44550.2
fatty acid reductase 5
Chr2_-_17065813 0.50 AT2G40900.1
nodulin MtN21 /EamA-like transporter family protein
Chr2_-_17337269 0.50 AT2G41560.2
AT2G41560.3
autoinhibited Ca(2+)-ATPase, isoform 4
Chr5_+_19116719 0.50 AT5G47060.1
AT5G47060.2
hypothetical protein (DUF581)
Chr1_+_9259750 0.50 AT1G26770.2
expansin A10
Chr1_-_21581165 0.50 AT1G58235.2
hypothetical protein
Chr5_+_17130186 0.50 AT5G42720.1
Glycosyl hydrolase family 17 protein
Chr1_+_3611490 0.49 AT1G10850.1
Leucine-rich repeat protein kinase family protein
Chr2_+_18061716 0.49 AT2G43500.1
AT2G43500.3
AT2G43500.4
AT2G43500.5
AT2G43500.6
AT2G43500.7
AT2G43500.2
AT2G43500.8
Plant regulator RWP-RK family protein
Chr2_-_7757875 0.49 AT2G17840.2
AT2G17840.1
Senescence/dehydration-associated protein-like protein
Chr5_-_24815455 0.49 AT5G61760.1
AT5G61760.2
inositol polyphosphate kinase 2 beta
Chr4_-_17687105 0.49 AT4G37640.1
calcium ATPase 2

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G29160

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.8 GO:0072708 response to sorbitol(GO:0072708)
0.5 1.5 GO:0015696 ammonium transport(GO:0015696)
0.3 0.3 GO:0060919 auxin influx(GO:0060919)
0.3 1.9 GO:0043090 amino acid import(GO:0043090)
0.3 1.0 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.2 1.1 GO:0046713 borate transport(GO:0046713)
0.2 0.9 GO:0010507 negative regulation of autophagy(GO:0010507)
0.2 0.6 GO:0032490 detection of molecule of bacterial origin(GO:0032490)
0.2 0.2 GO:0010450 inflorescence meristem growth(GO:0010450)
0.2 0.8 GO:0010480 microsporocyte differentiation(GO:0010480)
0.2 0.6 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.2 0.7 GO:1900409 positive regulation of cellular response to oxidative stress(GO:1900409)
0.2 0.5 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
0.2 0.4 GO:0015802 basic amino acid transport(GO:0015802)
0.2 0.5 GO:0035461 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.2 0.5 GO:0019368 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.2 0.5 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.2 0.7 GO:0031297 replication fork processing(GO:0031297)
0.2 0.8 GO:0010080 regulation of floral meristem growth(GO:0010080)
0.2 4.3 GO:0009269 response to desiccation(GO:0009269)
0.2 1.0 GO:0031116 positive regulation of microtubule polymerization or depolymerization(GO:0031112) positive regulation of microtubule polymerization(GO:0031116)
0.2 0.6 GO:0019322 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.2 2.2 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.2 0.3 GO:0009915 phloem sucrose loading(GO:0009915)
0.2 0.6 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.2 0.6 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.2 0.5 GO:0043132 NAD transport(GO:0043132)
0.2 1.1 GO:0010148 transpiration(GO:0010148)
0.1 1.3 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.1 0.4 GO:0010288 response to lead ion(GO:0010288)
0.1 0.4 GO:0015783 GDP-fucose transport(GO:0015783) UDP-glucose transport(GO:0015786)
0.1 0.3 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.9 GO:0032951 regulation of beta-glucan metabolic process(GO:0032950) regulation of beta-glucan biosynthetic process(GO:0032951) regulation of cellulose biosynthetic process(GO:2001006)
0.1 0.4 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.1 0.7 GO:0080121 AMP transport(GO:0080121)
0.1 0.5 GO:0071836 nectar secretion(GO:0071836)
0.1 0.4 GO:0032196 transposition(GO:0032196)
0.1 0.5 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.1 0.3 GO:0006348 chromatin silencing at telomere(GO:0006348)
0.1 0.7 GO:0043480 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 0.5 GO:0009558 embryo sac cellularization(GO:0009558)
0.1 0.6 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.1 1.0 GO:0009061 anaerobic respiration(GO:0009061)
0.1 0.6 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.1 0.4 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.1 0.3 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.1 0.3 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.1 0.7 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.1 0.3 GO:0010203 response to very low fluence red light stimulus(GO:0010203)
0.1 1.1 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.1 0.5 GO:0010338 leaf formation(GO:0010338)
0.1 0.3 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.1 0.5 GO:0044209 AMP salvage(GO:0044209)
0.1 0.6 GO:1900458 negative regulation of brassinosteroid mediated signaling pathway(GO:1900458)
0.1 1.4 GO:0010158 abaxial cell fate specification(GO:0010158)
0.1 0.4 GO:0071313 cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.1 0.3 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.1 0.5 GO:0006855 drug transmembrane transport(GO:0006855)
0.1 0.4 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 0.1 GO:0048478 replication fork protection(GO:0048478)
0.1 1.0 GO:0010098 suspensor development(GO:0010098)
0.1 1.6 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.1 1.1 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.1 1.4 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.3 GO:0071266 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.1 0.3 GO:1904812 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.1 0.3 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 0.5 GO:0006788 heme oxidation(GO:0006788)
0.1 0.4 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.9 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.7 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 0.8 GO:0009435 NAD biosynthetic process(GO:0009435)
0.1 0.7 GO:0010065 primary meristem tissue development(GO:0010065)
0.1 2.2 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.1 0.3 GO:0050792 regulation of viral process(GO:0050792)
0.1 0.3 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.1 0.7 GO:0033523 histone H2B ubiquitination(GO:0033523)
0.1 0.3 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 1.0 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1 0.3 GO:0007019 microtubule depolymerization(GO:0007019)
0.1 0.3 GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) histone arginine methylation(GO:0034969) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.1 0.6 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.1 0.3 GO:1901654 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217) response to ketone(GO:1901654)
0.1 0.3 GO:0010042 response to manganese ion(GO:0010042)
0.1 0.3 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.1 0.5 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.1 0.3 GO:0009643 photosynthetic acclimation(GO:0009643)
0.1 0.3 GO:0034635 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.1 0.3 GO:0035493 SNARE complex assembly(GO:0035493)
0.1 0.3 GO:0030242 pexophagy(GO:0030242)
0.1 0.3 GO:0071216 cellular response to biotic stimulus(GO:0071216)
0.1 1.3 GO:0010039 response to iron ion(GO:0010039)
0.1 0.4 GO:0035627 ceramide transport(GO:0035627)
0.1 0.9 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.1 0.2 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.1 0.2 GO:0098532 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.1 0.3 GO:0016139 glycoside catabolic process(GO:0016139)
0.1 0.6 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.1 0.2 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.1 0.3 GO:0033499 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.1 0.2 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.1 0.2 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.1 0.2 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.1 0.5 GO:1902326 positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.1 0.3 GO:0032418 lysosome localization(GO:0032418)
0.1 0.2 GO:0040014 regulation of multicellular organism growth(GO:0040014)
0.1 0.2 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 0.3 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.1 0.5 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.1 0.2 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.1 0.2 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 1.1 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 0.8 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.1 0.4 GO:0048455 stamen formation(GO:0048455)
0.1 0.4 GO:0048629 trichome patterning(GO:0048629)
0.1 0.4 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 0.3 GO:0015739 sialic acid transport(GO:0015739)
0.1 0.1 GO:0015692 lead ion transport(GO:0015692)
0.1 0.3 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 0.6 GO:0009298 GDP-mannose biosynthetic process(GO:0009298)
0.1 0.1 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.1 0.6 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.9 GO:0010315 auxin efflux(GO:0010315)
0.1 0.8 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.1 0.2 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.1 0.1 GO:0051645 Golgi localization(GO:0051645)
0.1 0.3 GO:0046208 spermine catabolic process(GO:0046208)
0.1 0.3 GO:0010569 regulation of double-strand break repair via homologous recombination(GO:0010569)
0.1 1.0 GO:0009684 indoleacetic acid biosynthetic process(GO:0009684)
0.1 0.7 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.1 0.3 GO:0080168 abscisic acid transport(GO:0080168)
0.1 1.2 GO:0043649 dicarboxylic acid catabolic process(GO:0043649)
0.1 0.3 GO:0061062 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 0.5 GO:0006772 thiamine metabolic process(GO:0006772) thiamine-containing compound metabolic process(GO:0042723)
0.1 1.0 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.1 0.3 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 1.3 GO:0055075 potassium ion homeostasis(GO:0055075)
0.1 0.1 GO:1903173 phytol metabolic process(GO:0033306) fatty alcohol metabolic process(GO:1903173)
0.1 0.7 GO:0006490 oligosaccharide-lipid intermediate biosynthetic process(GO:0006490)
0.1 0.8 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.1 GO:0072530 purine-containing compound transmembrane transport(GO:0072530)
0.1 0.2 GO:0000492 box C/D snoRNP assembly(GO:0000492)
0.1 0.4 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.1 0.7 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.1 0.1 GO:1990570 GDP-mannose transport(GO:0015784) purine nucleotide-sugar transmembrane transport(GO:0090480) GDP-mannose transmembrane transport(GO:1990570)
0.1 0.2 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.3 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.2 GO:0010018 far-red light signaling pathway(GO:0010018)
0.1 2.0 GO:0070417 cellular response to cold(GO:0070417)
0.1 0.3 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.1 0.9 GO:0032958 inositol phosphate biosynthetic process(GO:0032958)
0.1 0.3 GO:0010226 response to lithium ion(GO:0010226)
0.1 0.2 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.1 0.9 GO:0050777 negative regulation of immune response(GO:0050777)
0.1 0.6 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.1 0.3 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.1 0.2 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 0.2 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.1 0.1 GO:0046321 positive regulation of fatty acid oxidation(GO:0046321)
0.1 0.3 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.1 0.2 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 0.2 GO:0007569 cell aging(GO:0007569) regulation of cell aging(GO:0090342)
0.1 0.2 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.1 0.1 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.1 0.2 GO:0034059 response to anoxia(GO:0034059)
0.1 0.5 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.1 0.3 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.1 0.3 GO:0071731 response to nitric oxide(GO:0071731)
0.1 0.6 GO:0017157 regulation of exocytosis(GO:0017157)
0.1 0.1 GO:0046864 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865)
0.1 0.2 GO:0034727 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.1 0.2 GO:0008333 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.1 0.4 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 0.5 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.2 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.1 0.1 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.1 0.1 GO:0075733 intracellular transport of virus(GO:0075733)
0.1 0.5 GO:0018210 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.1 0.3 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.1 0.6 GO:0042176 regulation of protein catabolic process(GO:0042176)
0.1 0.2 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.1 0.4 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.1 1.0 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.1 0.7 GO:0048829 root cap development(GO:0048829)
0.1 0.5 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.1 0.2 GO:0030100 regulation of endocytosis(GO:0030100)
0.1 0.2 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.1 0.3 GO:1990641 response to iron ion starvation(GO:1990641)
0.0 0.2 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839)
0.0 0.5 GO:0051785 positive regulation of nuclear division(GO:0051785)
0.0 0.4 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.2 GO:2000576 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.0 0.2 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.0 1.3 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.1 GO:0051438 regulation of ubiquitin-protein transferase activity(GO:0051438) positive regulation of ubiquitin-protein transferase activity(GO:0051443)
0.0 0.0 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
0.0 0.2 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.0 0.0 GO:1902583 multi-organism intracellular transport(GO:1902583)
0.0 2.2 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.1 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.0 2.2 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788) negative regulation of response to alcohol(GO:1901420)
0.0 0.5 GO:0007008 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 0.6 GO:1902099 regulation of mitotic metaphase/anaphase transition(GO:0030071) regulation of metaphase/anaphase transition of cell cycle(GO:1902099)
0.0 0.2 GO:0046825 regulation of protein export from nucleus(GO:0046825)
0.0 0.5 GO:0009088 threonine biosynthetic process(GO:0009088)
0.0 0.4 GO:0050879 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.0 0.2 GO:1900909 negative regulation of ethylene biosynthetic process(GO:0010366) negative regulation of sulfur amino acid metabolic process(GO:0031336) negative regulation of cellular amine metabolic process(GO:0033239) negative regulation of cellular amino acid metabolic process(GO:0045763) negative regulation of sulfur metabolic process(GO:0051175) negative regulation of olefin metabolic process(GO:1900909) negative regulation of olefin biosynthetic process(GO:1900912)
0.0 0.2 GO:0009557 antipodal cell differentiation(GO:0009557)
0.0 0.4 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.0 0.2 GO:0033512 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.0 0.4 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.1 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.0 0.3 GO:0007020 microtubule nucleation(GO:0007020)
0.0 0.2 GO:0000212 meiotic spindle organization(GO:0000212)
0.0 0.4 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.4 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.0 0.3 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.7 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.0 0.1 GO:0006420 arginyl-tRNA aminoacylation(GO:0006420)
0.0 1.2 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.1 GO:1901672 positive regulation of systemic acquired resistance(GO:1901672)
0.0 0.2 GO:2000014 regulation of endosperm development(GO:2000014)
0.0 0.1 GO:0010394 homogalacturonan biosynthetic process(GO:0010289) homogalacturonan metabolic process(GO:0010394)
0.0 0.6 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.5 GO:0015770 sucrose transport(GO:0015770)
0.0 0.2 GO:0005513 detection of calcium ion(GO:0005513)
0.0 0.3 GO:0051293 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.0 1.5 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.0 0.4 GO:1902074 response to salt(GO:1902074)
0.0 0.4 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 0.3 GO:0052325 cell wall pectin biosynthetic process(GO:0052325)
0.0 0.1 GO:0006527 arginine catabolic process(GO:0006527)
0.0 0.2 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.2 GO:0006517 protein deglycosylation(GO:0006517)
0.0 0.1 GO:0051238 sequestering of metal ion(GO:0051238)
0.0 0.1 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.0 0.2 GO:0015959 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.0 0.2 GO:0009590 detection of gravity(GO:0009590)
0.0 0.7 GO:0010099 regulation of photomorphogenesis(GO:0010099)
0.0 0.3 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.0 0.3 GO:0016926 protein desumoylation(GO:0016926)
0.0 0.3 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.0 0.2 GO:0010070 zygote asymmetric cell division(GO:0010070)
0.0 0.4 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.6 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.8 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.3 GO:0052126 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) transport of virus(GO:0046794) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.1 GO:0080051 cutin transport(GO:0080051)
0.0 0.3 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.0 0.2 GO:0000965 mitochondrial RNA 3'-end processing(GO:0000965)
0.0 0.2 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.0 0.0 GO:0051051 negative regulation of transport(GO:0051051)
0.0 0.3 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.0 0.3 GO:0055072 iron ion homeostasis(GO:0055072)
0.0 1.8 GO:0006897 endocytosis(GO:0006897)
0.0 0.4 GO:2000030 regulation of response to red or far red light(GO:2000030)
0.0 0.3 GO:0015780 nucleotide-sugar transport(GO:0015780)
0.0 0.1 GO:0016572 histone phosphorylation(GO:0016572)
0.0 0.3 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.1 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.0 0.3 GO:2000601 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0 0.1 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.0 0.1 GO:0046471 phosphatidylglycerol biosynthetic process(GO:0006655) phosphatidylglycerol metabolic process(GO:0046471)
0.0 0.4 GO:0051026 chiasma assembly(GO:0051026)
0.0 0.8 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.1 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.0 0.8 GO:0032786 positive regulation of DNA-templated transcription, elongation(GO:0032786)
0.0 1.1 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.6 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.2 GO:1904482 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.0 0.6 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.0 GO:0061085 regulation of histone H3-K27 methylation(GO:0061085)
0.0 0.3 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.0 0.2 GO:0006491 N-glycan processing(GO:0006491)
0.0 0.8 GO:0006487 protein N-linked glycosylation(GO:0006487)
0.0 0.2 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.0 0.1 GO:0048205 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.0 0.7 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.0 0.2 GO:0045898 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.0 0.1 GO:0031110 regulation of microtubule polymerization or depolymerization(GO:0031110)
0.0 0.1 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.0 0.1 GO:0006167 AMP biosynthetic process(GO:0006167)
0.0 0.1 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.0 0.2 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.0 0.3 GO:0009616 virus induced gene silencing(GO:0009616) modulation by symbiont of RNA levels in host(GO:0052018) modulation of RNA levels in other organism involved in symbiotic interaction(GO:0052249) cellular response to virus(GO:0098586)
0.0 0.1 GO:0006103 2-oxoglutarate metabolic process(GO:0006103) aspartate metabolic process(GO:0006531)
0.0 0.4 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.1 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.0 0.3 GO:0006379 mRNA cleavage(GO:0006379)
0.0 1.3 GO:0009631 cold acclimation(GO:0009631)
0.0 0.2 GO:0007186 G-protein coupled receptor signaling pathway(GO:0007186)
0.0 0.1 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.0 0.1 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.0 0.0 GO:0040023 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023) nucleus localization(GO:0051647)
0.0 1.5 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 1.0 GO:0040034 regulation of development, heterochronic(GO:0040034)
0.0 0.1 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.0 0.7 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.1 GO:0040030 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.0 0.1 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.0 0.4 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.8 GO:0046839 phospholipid dephosphorylation(GO:0046839)
0.0 1.2 GO:0048825 cotyledon development(GO:0048825)
0.0 0.1 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.0 0.1 GO:0010155 regulation of proton transport(GO:0010155)
0.0 0.1 GO:0098719 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) inorganic cation import into cell(GO:0098659) sodium ion import across plasma membrane(GO:0098719) inorganic ion import into cell(GO:0099587) sodium ion import into cell(GO:1990118)
0.0 0.1 GO:0034063 stress granule assembly(GO:0034063)
0.0 0.1 GO:0051782 negative regulation of cell division(GO:0051782)
0.0 0.1 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.0 0.6 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.0 0.1 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.0 0.2 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.0 0.8 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.3 GO:0000266 mitochondrial fission(GO:0000266)
0.0 0.1 GO:0006816 calcium ion transport(GO:0006816)
0.0 0.1 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.0 0.1 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.0 0.1 GO:1901006 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.0 0.2 GO:0006308 DNA catabolic process(GO:0006308)
0.0 1.6 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.1 GO:0090603 sieve element differentiation(GO:0090603)
0.0 0.4 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 2.7 GO:0009845 seed germination(GO:0009845)
0.0 0.2 GO:0031507 heterochromatin assembly(GO:0031507)
0.0 0.6 GO:0009638 phototropism(GO:0009638)
0.0 0.7 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 0.2 GO:2001022 positive regulation of response to DNA damage stimulus(GO:2001022)
0.0 0.1 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.2 GO:0071491 red light signaling pathway(GO:0010161) cellular response to red light(GO:0071491)
0.0 0.1 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.0 0.3 GO:0006559 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.0 2.0 GO:0009739 response to gibberellin(GO:0009739)
0.0 0.2 GO:2001289 lipid X metabolic process(GO:2001289)
0.0 0.1 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.0 0.5 GO:0009960 endosperm development(GO:0009960)
0.0 0.1 GO:0006680 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.0 0.3 GO:0006265 DNA topological change(GO:0006265)
0.0 0.1 GO:0031396 regulation of protein ubiquitination(GO:0031396)
0.0 0.1 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.2 GO:0018342 protein prenylation(GO:0018342) prenylation(GO:0097354)
0.0 0.4 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.4 GO:0051788 response to misfolded protein(GO:0051788) cellular response to misfolded protein(GO:0071218)
0.0 0.1 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 1.8 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 0.1 GO:0019401 alditol biosynthetic process(GO:0019401)
0.0 1.0 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.1 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.0 0.2 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.0 0.7 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.2 GO:0006862 nucleotide transport(GO:0006862)
0.0 0.1 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.1 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.0 0.1 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.0 0.0 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.0 0.2 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.5 GO:0042026 protein refolding(GO:0042026)
0.0 0.3 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.8 GO:0042538 hyperosmotic salinity response(GO:0042538)
0.0 0.6 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.1 GO:0046146 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.0 0.1 GO:0009819 drought recovery(GO:0009819)
0.0 0.0 GO:0071494 cellular response to UV-C(GO:0071494)
0.0 0.2 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 0.3 GO:0015936 coenzyme A metabolic process(GO:0015936)
0.0 0.1 GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation(GO:0006616)
0.0 0.1 GO:0010088 phloem development(GO:0010088)
0.0 0.3 GO:0032544 plastid translation(GO:0032544)
0.0 0.3 GO:0006270 DNA replication initiation(GO:0006270)
0.0 0.0 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.0 0.2 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.0 0.0 GO:0070542 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.0 0.5 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 0.1 GO:0070536 protein K63-linked deubiquitination(GO:0070536)
0.0 0.1 GO:0007021 tubulin complex assembly(GO:0007021)
0.0 0.2 GO:0050665 hydrogen peroxide biosynthetic process(GO:0050665)
0.0 0.1 GO:0016098 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.0 0.1 GO:0048863 stem cell differentiation(GO:0048863)
0.0 0.0 GO:0042550 photosystem I stabilization(GO:0042550)
0.0 0.6 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.1 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.0 0.1 GO:0006624 vacuolar protein processing(GO:0006624)
0.0 0.1 GO:0002697 regulation of immune effector process(GO:0002697) regulation of defense response to virus(GO:0050688)
0.0 0.4 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.1 GO:0080183 response to photooxidative stress(GO:0080183)
0.0 0.1 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 0.1 GO:0000919 cell plate assembly(GO:0000919)
0.0 0.4 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.0 1.3 GO:0048764 trichoblast maturation(GO:0048764) root hair cell differentiation(GO:0048765)
0.0 0.1 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.0 0.2 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 3.1 GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process(GO:0043161)
0.0 0.9 GO:0006413 translational initiation(GO:0006413)
0.0 0.1 GO:0010359 regulation of anion channel activity(GO:0010359)
0.0 0.0 GO:0015074 DNA integration(GO:0015074)
0.0 0.1 GO:0009438 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.1 GO:0019755 one-carbon compound transport(GO:0019755)
0.0 0.1 GO:0051783 regulation of nuclear division(GO:0051783)
0.0 0.2 GO:0043068 positive regulation of programmed cell death(GO:0043068)
0.0 0.1 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.0 0.2 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.1 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.0 0.1 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.0 0.1 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.0 0.1 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.0 GO:0035865 cellular response to potassium ion(GO:0035865)
0.0 0.0 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)
0.0 0.3 GO:1903509 glycolipid metabolic process(GO:0006664) liposaccharide metabolic process(GO:1903509)
0.0 0.1 GO:0007142 male meiosis II(GO:0007142)
0.0 0.0 GO:0034476 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.0 0.6 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.2 GO:0006744 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 0.0 GO:1900911 regulation of ethylene biosynthetic process(GO:0010364) regulation of sulfur amino acid metabolic process(GO:0031335) regulation of olefin metabolic process(GO:1900908) regulation of olefin biosynthetic process(GO:1900911)
0.0 0.2 GO:0002237 response to molecule of bacterial origin(GO:0002237)
0.0 0.6 GO:0072657 protein localization to membrane(GO:0072657)
0.0 0.0 GO:0071046 polyadenylation-dependent RNA catabolic process(GO:0043633) polyadenylation-dependent ncRNA catabolic process(GO:0043634) nuclear ncRNA surveillance(GO:0071029) nuclear polyadenylation-dependent rRNA catabolic process(GO:0071035) nuclear polyadenylation-dependent ncRNA catabolic process(GO:0071046)
0.0 0.0 GO:0051646 mitochondrion localization(GO:0051646)
0.0 0.4 GO:0006401 RNA catabolic process(GO:0006401)
0.0 0.1 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.7 GO:0019932 second-messenger-mediated signaling(GO:0019932)
0.0 0.1 GO:0048598 embryonic morphogenesis(GO:0048598)
0.0 0.1 GO:0018206 peptidyl-methionine modification(GO:0018206)
0.0 0.0 GO:0006561 proline biosynthetic process(GO:0006561)
0.0 0.2 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.4 GO:0009746 response to hexose(GO:0009746)
0.0 0.8 GO:0018209 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.0 0.1 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.2 GO:0010143 cutin biosynthetic process(GO:0010143)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.5 GO:0016328 lateral plasma membrane(GO:0016328)
0.2 0.6 GO:0005712 chiasma(GO:0005712)
0.2 0.5 GO:1990298 bub1-bub3 complex(GO:1990298)
0.1 0.8 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 0.4 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.1 0.2 GO:0034719 SMN-Sm protein complex(GO:0034719)
0.1 0.6 GO:0009897 external side of plasma membrane(GO:0009897)
0.1 0.3 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 0.4 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.1 0.4 GO:1990752 microtubule end(GO:1990752)
0.1 0.4 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.1 0.3 GO:0060293 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.1 0.6 GO:0030897 HOPS complex(GO:0030897)
0.1 0.3 GO:0030874 nucleolar chromatin(GO:0030874)
0.1 0.3 GO:0045334 clathrin-coated endocytic vesicle(GO:0045334)
0.1 0.5 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.1 0.3 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.1 0.3 GO:0000923 equatorial microtubule organizing center(GO:0000923) cell division site part(GO:0032155)
0.1 0.4 GO:0010007 magnesium chelatase complex(GO:0010007)
0.1 0.5 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.1 0.2 GO:0009501 amyloplast(GO:0009501)
0.1 0.3 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.1 0.2 GO:0005656 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.1 0.7 GO:0042555 MCM complex(GO:0042555)
0.1 0.4 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.1 0.5 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 0.7 GO:0016272 prefoldin complex(GO:0016272)
0.1 0.4 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.1 1.6 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 0.3 GO:0034271 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.1 0.2 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.1 0.2 GO:0005775 vacuolar lumen(GO:0005775)
0.1 0.4 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.1 0.4 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.1 0.3 GO:0030139 endocytic vesicle(GO:0030139)
0.1 0.3 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.1 0.4 GO:0000813 ESCRT I complex(GO:0000813)
0.1 0.9 GO:0005769 early endosome(GO:0005769)
0.1 0.2 GO:0000922 spindle pole(GO:0000922)
0.1 0.9 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.1 0.6 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 0.3 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.1 0.4 GO:0016363 nuclear matrix(GO:0016363)
0.0 0.2 GO:0030286 dynein complex(GO:0030286)
0.0 0.4 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.0 4.7 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.2 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.0 4.2 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.9 GO:0009574 preprophase band(GO:0009574)
0.0 0.3 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.0 0.7 GO:0005876 spindle microtubule(GO:0005876)
0.0 0.4 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 0.3 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.4 GO:0098553 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.0 0.1 GO:0034457 Mpp10 complex(GO:0034457)
0.0 0.2 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 0.6 GO:0072686 mitotic spindle(GO:0072686)
0.0 0.3 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 0.2 GO:0030141 secretory granule(GO:0030141)
0.0 0.4 GO:0017119 Golgi transport complex(GO:0017119)
0.0 2.3 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.3 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 0.2 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.4 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.1 GO:0032044 DSIF complex(GO:0032044)
0.0 0.3 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 0.4 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.2 GO:0031298 replication fork protection complex(GO:0031298)
0.0 0.2 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.0 0.2 GO:0071256 translocon complex(GO:0071256)
0.0 1.7 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 6.4 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.1 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 0.2 GO:0000445 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.0 0.1 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 0.4 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.2 GO:0005844 polysome(GO:0005844)
0.0 3.7 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.7 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.1 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.0 0.3 GO:0031209 SCAR complex(GO:0031209)
0.0 0.4 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.1 GO:0030126 COPI vesicle coat(GO:0030126) COPI-coated vesicle membrane(GO:0030663)
0.0 0.1 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.2 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.2 GO:0010369 chromocenter(GO:0010369)
0.0 0.4 GO:0030125 clathrin vesicle coat(GO:0030125)
0.0 3.8 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.2 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.0 0.0 GO:0030093 chloroplast photosystem I(GO:0030093)
0.0 0.1 GO:1990415 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.0 0.9 GO:0009504 cell plate(GO:0009504)
0.0 0.1 GO:0098554 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.0 0.1 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.0 0.1 GO:0009528 plastid inner membrane(GO:0009528)
0.0 0.1 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 1.5 GO:0031969 chloroplast membrane(GO:0031969)
0.0 0.3 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.0 5.5 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.0 6.9 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.1 GO:0005782 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.0 0.2 GO:0030686 90S preribosome(GO:0030686)
0.0 0.1 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.0 0.0 GO:0033263 CORVET complex(GO:0033263)
0.0 0.1 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.0 GO:0031501 mannosyltransferase complex(GO:0031501) dolichol-phosphate-mannose synthase complex(GO:0033185)
0.0 0.1 GO:0035861 site of double-strand break(GO:0035861)
0.0 1.4 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.4 GO:0030134 ER to Golgi transport vesicle(GO:0030134)
0.0 0.1 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 0.4 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.0 0.2 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.0 0.5 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.3 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.6 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 0.3 GO:0000178 exosome (RNase complex)(GO:0000178)
0.0 0.2 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.0 1.2 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.1 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.0 0.2 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.1 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.0 2.3 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.2 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.3 GO:0055028 cortical microtubule(GO:0055028)
0.0 0.8 GO:0030964 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.2 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.0 0.1 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 0.1 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 0.2 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 0.5 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.0 0.3 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.9 GO:0090406 pollen tube(GO:0090406)
0.0 0.2 GO:0048475 membrane coat(GO:0030117) coated membrane(GO:0048475)
0.0 0.1 GO:0043230 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 0.2 GO:0071011 precatalytic spliceosome(GO:0071011)
0.0 0.3 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.2 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.0 0.1 GO:0000791 euchromatin(GO:0000791)
0.0 0.2 GO:0005838 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.0 0.0 GO:0005960 glycine cleavage complex(GO:0005960)
0.0 0.0 GO:0030896 checkpoint clamp complex(GO:0030896)
0.0 0.1 GO:0098852 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.0 GO:0032807 DNA ligase IV complex(GO:0032807)
0.0 30.4 GO:0005886 plasma membrane(GO:0005886)
0.0 0.0 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.0 0.2 GO:0043596 nuclear replication fork(GO:0043596)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.5 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.4 1.1 GO:0008440 inositol-1,4,5-trisphosphate 6-kinase activity(GO:0000823) inositol tetrakisphosphate 3-kinase activity(GO:0000824) inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440) inositol tetrakisphosphate 5-kinase activity(GO:0047326)
0.3 1.7 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.3 1.4 GO:0032791 lead ion binding(GO:0032791)
0.3 1.2 GO:0051980 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.2 4.0 GO:0016157 sucrose synthase activity(GO:0016157)
0.2 0.9 GO:0004556 alpha-amylase activity(GO:0004556)
0.2 1.1 GO:0080139 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.2 0.6 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.2 0.6 GO:0005344 oxygen transporter activity(GO:0005344)
0.2 0.8 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.2 0.7 GO:0019172 glyoxalase III activity(GO:0019172)
0.2 0.5 GO:0090422 thiamine pyrophosphate transporter activity(GO:0090422)
0.2 2.3 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.2 1.3 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.2 0.8 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.2 0.5 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.2 1.0 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.2 1.0 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.2 0.6 GO:0080161 auxin influx transmembrane transporter activity(GO:0010328) auxin transmembrane transporter activity(GO:0080161)
0.2 0.2 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.2 1.2 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.6 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.1 0.6 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 0.8 GO:0019904 protein domain specific binding(GO:0019904)
0.1 0.4 GO:0031210 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.1 0.7 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.1 0.5 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.1 0.4 GO:0070336 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.1 0.9 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.7 GO:0015101 organic cation transmembrane transporter activity(GO:0015101)
0.1 1.3 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.1 0.5 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 0.6 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.1 3.4 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.1 0.5 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.1 0.5 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.1 0.6 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.3 GO:0019779 Atg8 activating enzyme activity(GO:0019779)
0.1 0.6 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457)
0.1 0.3 GO:0036310 annealing helicase activity(GO:0036310)
0.1 0.3 GO:0008517 folic acid transporter activity(GO:0008517)
0.1 2.2 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 0.3 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 0.3 GO:0016504 peptidase activator activity(GO:0016504)
0.1 0.3 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 0.5 GO:0004001 adenosine kinase activity(GO:0004001)
0.1 0.6 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.1 0.7 GO:0005034 osmosensor activity(GO:0005034)
0.1 0.3 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.1 0.3 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.1 0.3 GO:0016971 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.1 0.4 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 0.9 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.1 0.3 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.1 0.3 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.1 0.4 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.1 0.4 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.1 0.6 GO:0030544 Hsp70 protein binding(GO:0030544)
0.1 0.3 GO:0004788 thiamine diphosphokinase activity(GO:0004788) thiamine binding(GO:0030975)
0.1 1.4 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.2 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.1 0.3 GO:0015119 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.1 0.5 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.1 0.5 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.1 0.3 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.1 0.3 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.1 0.3 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 0.4 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 1.3 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.1 0.4 GO:1902388 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.1 0.4 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.1 0.4 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.2 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.1 0.1 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.1 1.8 GO:0008143 poly(A) binding(GO:0008143)
0.1 0.5 GO:0008022 protein C-terminus binding(GO:0008022)
0.1 0.2 GO:0045430 chalcone isomerase activity(GO:0045430)
0.1 0.4 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.1 1.8 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.1 0.3 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 0.6 GO:0019158 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 1.7 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.1 0.4 GO:0016531 copper chaperone activity(GO:0016531)
0.1 1.1 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 0.6 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.5 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 0.8 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 0.2 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.1 0.3 GO:0016768 spermine synthase activity(GO:0016768)
0.1 0.5 GO:0043015 gamma-tubulin binding(GO:0043015)
0.1 0.3 GO:0070140 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.1 0.3 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.5 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.1 0.1 GO:0008821 crossover junction endodeoxyribonuclease activity(GO:0008821)
0.1 0.4 GO:0051003 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.1 0.5 GO:0010011 auxin binding(GO:0010011)
0.1 0.5 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.1 0.1 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.1 0.8 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.1 0.5 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 0.2 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.1 0.3 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.1 0.1 GO:0035241 protein-arginine omega-N monomethyltransferase activity(GO:0035241)
0.1 0.8 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 0.3 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.1 0.2 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 0.2 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.1 0.3 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.1 0.6 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.1 0.1 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.1 0.8 GO:0008097 5S rRNA binding(GO:0008097)
0.1 0.7 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 0.2 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.1 0.5 GO:0004661 protein geranylgeranyltransferase activity(GO:0004661)
0.1 0.4 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.1 1.1 GO:0019902 phosphatase binding(GO:0019902)
0.1 0.2 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.1 0.4 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.1 0.2 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.1 0.4 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 0.2 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.1 0.2 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.1 0.2 GO:0051010 microtubule plus-end binding(GO:0051010)
0.1 0.4 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 0.9 GO:0035064 methylated histone binding(GO:0035064)
0.1 0.2 GO:0051011 microtubule minus-end binding(GO:0051011)
0.1 0.5 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.1 0.3 GO:0000150 recombinase activity(GO:0000150)
0.1 0.5 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.3 GO:0004594 pantothenate kinase activity(GO:0004594)
0.1 0.3 GO:0003785 actin monomer binding(GO:0003785)
0.1 0.6 GO:0051184 cofactor transporter activity(GO:0051184)
0.1 0.4 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.1 0.6 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.1 0.1 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 0.2 GO:0051959 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.0 0.2 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.0 1.0 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.7 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.1 GO:0042577 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.0 0.4 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.0 0.9 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.3 GO:0046592 polyamine oxidase activity(GO:0046592)
0.0 0.5 GO:0010485 H4 histone acetyltransferase activity(GO:0010485)
0.0 0.2 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.4 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.1 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.0 0.2 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)
0.0 0.1 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.1 GO:0015180 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.0 0.5 GO:0016160 amylase activity(GO:0016160) beta-amylase activity(GO:0016161)
0.0 0.2 GO:0016751 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.0 0.2 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.6 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.2 GO:0070034 telomerase RNA binding(GO:0070034)
0.0 0.2 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.0 0.4 GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water(GO:0016717)
0.0 0.4 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.0 0.1 GO:0004814 arginine-tRNA ligase activity(GO:0004814)
0.0 0.4 GO:0071617 lysophospholipid acyltransferase activity(GO:0071617)
0.0 0.2 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.0 0.2 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.0 0.3 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 0.4 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.2 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.0 0.3 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.0 1.1 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.4 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.2 GO:0004003 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.1 GO:0008318 protein prenyltransferase activity(GO:0008318)
0.0 0.2 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.1 GO:0008428 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.0 0.3 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.2 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.0 0.7 GO:0016844 strictosidine synthase activity(GO:0016844)
0.0 0.2 GO:0000400 four-way junction DNA binding(GO:0000400)
0.0 0.1 GO:0000035 acyl binding(GO:0000035)
0.0 0.3 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.5 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.0 0.2 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.0 0.3 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.1 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.0 0.1 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.0 0.3 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.1 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0 0.5 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.1 GO:0035175 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.0 0.1 GO:0008481 sphinganine kinase activity(GO:0008481)
0.0 0.2 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.0 0.3 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.0 0.1 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.0 0.4 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.3 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 0.4 GO:0035198 miRNA binding(GO:0035198)
0.0 0.2 GO:0030151 molybdenum ion binding(GO:0030151)
0.0 0.1 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.0 0.2 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 0.3 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.6 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.5 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084)
0.0 0.2 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.0 2.4 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.4 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.2 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 1.3 GO:0036442 hydrogen-exporting ATPase activity(GO:0036442)
0.0 0.1 GO:0001054 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.0 0.3 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.1 GO:0016842 amidine-lyase activity(GO:0016842)
0.0 0.3 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 0.3 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.4 GO:0051117 ATPase binding(GO:0051117)
0.0 0.1 GO:0015446 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225)
0.0 1.0 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 0.2 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.0 0.3 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.1 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.0 0.1 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.0 0.6 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.0 0.1 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.0 0.4 GO:0005249 voltage-gated potassium channel activity(GO:0005249)
0.0 0.1 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.0 0.2 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.0 0.9 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.1 GO:0050347 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.0 0.5 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 1.5 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.3 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.2 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.0 0.1 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 0.3 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.4 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.1 GO:0016433 rRNA (adenine) methyltransferase activity(GO:0016433)
0.0 0.6 GO:0097472 cyclin-dependent protein serine/threonine kinase activity(GO:0004693) cyclin-dependent protein kinase activity(GO:0097472)
0.0 0.3 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0 0.3 GO:0016896 3'-5'-exoribonuclease activity(GO:0000175) exoribonuclease activity(GO:0004532) exoribonuclease activity, producing 5'-phosphomonoesters(GO:0016896)
0.0 0.1 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.0 0.1 GO:0047627 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.0 0.2 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.2 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266) phosphatidylinositol-3,5-bisphosphate binding(GO:0080025)
0.0 0.1 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.0 2.4 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.1 GO:0004348 glucosylceramidase activity(GO:0004348)
0.0 0.2 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.4 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.4 GO:0030515 snoRNA binding(GO:0030515)
0.0 1.8 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.3 GO:0016307 phosphatidylinositol phosphate kinase activity(GO:0016307) 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.2 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.0 0.2 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.3 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.4 GO:0030276 clathrin binding(GO:0030276)
0.0 0.0 GO:0051723 protein methylesterase activity(GO:0051723)
0.0 0.1 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.0 0.3 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.2 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.1 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.0 0.3 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.6 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.1 GO:0005338 nucleotide-sugar transmembrane transporter activity(GO:0005338)
0.0 1.4 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.2 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 0.9 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.1 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.1 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 0.1 GO:0070403 NAD+ binding(GO:0070403)
0.0 0.2 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 0.2 GO:0043495 protein anchor(GO:0043495)
0.0 0.1 GO:0052854 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.0 1.2 GO:0032182 ubiquitin-like protein binding(GO:0032182)
0.0 0.1 GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism(GO:0044769)
0.0 0.1 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.0 0.1 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.0 0.8 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.2 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.0 0.4 GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor(GO:0016641)
0.0 0.4 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.3 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 0.1 GO:0030295 kinase activator activity(GO:0019209) protein kinase activator activity(GO:0030295)
0.0 0.6 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.2 GO:0052745 inositol phosphate phosphatase activity(GO:0052745)
0.0 0.0 GO:0045118 azole transporter activity(GO:0045118)
0.0 0.3 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.1 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.0 0.0 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.0 0.1 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.0 0.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 1.1 GO:0015631 tubulin binding(GO:0015631)
0.0 0.1 GO:0015210 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.0 0.1 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.7 GO:0043621 protein self-association(GO:0043621)
0.0 3.2 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.5 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.7 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.1 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.3 GO:0005048 signal sequence binding(GO:0005048)
0.0 0.1 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.1 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.0 0.1 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 0.2 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.1 GO:0047714 galactolipase activity(GO:0047714)
0.0 0.0 GO:0004106 chorismate mutase activity(GO:0004106)
0.0 0.7 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.1 GO:0008169 C-methyltransferase activity(GO:0008169)
0.0 0.9 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.1 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.2 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.0 0.1 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.4 GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor(GO:0016620)
0.0 1.1 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.1 GO:0009008 DNA-methyltransferase activity(GO:0009008)
0.0 0.1 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.6 NABA SECRETED FACTORS Genes encoding secreted soluble factors
0.1 0.4 PID RAS PATHWAY Regulation of Ras family activation
0.1 0.4 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.3 ST GAQ PATHWAY G alpha q Pathway
0.1 0.3 PID ERBB1 INTERNALIZATION PATHWAY Internalization of ErbB1
0.1 0.5 PID S1P META PATHWAY Sphingosine 1-phosphate (S1P) pathway
0.1 0.6 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 0.3 PID P53 REGULATION PATHWAY p53 pathway
0.1 0.2 SIG CHEMOTAXIS Genes related to chemotaxis
0.1 0.3 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.1 0.1 PID IL4 2PATHWAY IL4-mediated signaling events
0.0 0.1 PID AVB3 OPN PATHWAY Osteopontin-mediated events
0.0 0.0 ST GRANULE CELL SURVIVAL PATHWAY Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway.
0.0 0.4 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.1 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.0 0.1 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.0 0.2 PID AP1 PATHWAY AP-1 transcription factor network
0.0 0.1 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.0 0.2 PID AJDISS 2PATHWAY Posttranslational regulation of adherens junction stability and dissassembly
0.0 0.1 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.0 0.2 PID RAC1 PATHWAY RAC1 signaling pathway
0.0 0.0 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.0 0.0 PID BARD1 PATHWAY BARD1 signaling events
0.0 0.1 PID PLK1 PATHWAY PLK1 signaling events
0.0 0.1 ST FAS SIGNALING PATHWAY Fas Signaling Pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.8 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.3 0.8 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.3 1.0 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 7ALPHA HYDROXYCHOLESTEROL Genes involved in Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
0.2 1.3 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.2 0.6 REACTOME DEADENYLATION OF MRNA Genes involved in Deadenylation of mRNA
0.1 0.4 REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC
0.1 0.3 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1 0.3 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.1 0.3 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.1 0.3 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.1 0.5 REACTOME PROLACTIN RECEPTOR SIGNALING Genes involved in Prolactin receptor signaling
0.1 0.3 REACTOME SPRY REGULATION OF FGF SIGNALING Genes involved in Spry regulation of FGF signaling
0.1 1.5 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.5 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.1 0.3 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.1 0.2 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.2 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.1 0.3 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.0 0.2 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.0 0.1 REACTOME INTEGRIN CELL SURFACE INTERACTIONS Genes involved in Integrin cell surface interactions
0.0 0.1 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.0 0.2 REACTOME HEMOSTASIS Genes involved in Hemostasis
0.0 0.2 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.0 0.1 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.0 0.2 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.2 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.0 0.3 REACTOME METABOLISM OF CARBOHYDRATES Genes involved in Metabolism of carbohydrates
0.0 0.1 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.0 0.1 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.0 0.3 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.0 0.5 REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex