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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G28300

Z-value: 0.48

Transcription factors associated with AT1G28300

Gene Symbol Gene ID Gene Info
AT1G28300
AT1G28300 AP2/B3-like transcriptional factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
LEC2arTal_v1_Chr1_-_9899876_98998760.224.5e-01Click!

Activity profile of AT1G28300 motif

Sorted Z-values of AT1G28300 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_20354351 1.42 AT3G54940.3
AT3G54940.2
AT3G54940
Papain family cysteine protease
Chr3_-_222827 0.70 AT3G01570.1
AT3G01570
Oleosin family protein
Chr5_-_17758275 0.68 AT5G44120.2
AT5G44120.1
AT5G44120.3
CRA1
RmlC-like cupins superfamily protein
Chr1_+_25053673 0.56 AT1G67100.1
LBD40
LOB domain-containing protein 40
Chr4_+_13611796 0.53 AT4G27160.1
SESA3
seed storage albumin 3
Chr5_-_22239187 0.52 AT5G54740.1
SESA5
seed storage albumin 5
Chr4_+_12900430 0.46 AT4G25140.1
OLEO1
oleosin 1
Chr1_-_24183199 0.45 AT1G65090.2
AT1G65090.1
AT1G65090.3
AT1G65090
nucleolin
Chr4_+_13607329 0.44 AT4G27140.1
SESA1
seed storage albumin 1
Chr5_-_20591937 0.39 AT5G50600.1
HSD1
hydroxysteroid dehydrogenase 1
Chr2_+_17130774 0.33 AT2G41070.5
AT2G41070.2
AT2G41070.1
AT2G41070.3
EEL
Basic-leucine zipper (bZIP) transcription factor family protein
Chr4_+_13613596 0.29 AT4G27170.1
SESA4
seed storage albumin 4
Chr2_+_17129753 0.27 AT2G41070.4
EEL
Basic-leucine zipper (bZIP) transcription factor family protein
Chr5_-_4450864 0.25 AT5G13790.1
AT5G13790.2
AGL15
AGAMOUS-like 15
Chr4_+_13609341 0.14 AT4G27150.1
SESA2
seed storage albumin 2
Chr3_+_22995686 0.02 AT3G62100.1
AT3G62100.2
IAA30
indole-3-acetic acid inducible 30

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G28300

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.1 0.3 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862) negative regulation of seed maturation(GO:2000692)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.2 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 1.4 GO:0005764 lysosome(GO:0005764)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.0 0.5 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 1.4 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.7 GO:0045735 nutrient reservoir activity(GO:0045735)