ISMARA results: AT1G19350

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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G19350

Z-value: 0.16

Transcription factors associated with AT1G19350

Gene Symbol	Gene ID	Gene Info
AT1G19350 TAIR	AT1G19350	Brassinosteroid signaling positive regulator (BZR1) family protein

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
BES1	arTal_v1_Chr1_+_6688463_6688538	-0.62	1.7e-02	Click!

Activity profile of AT1G19350 motif

Sorted Z-values of AT1G19350 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr4_-_10316886_10316886 Show fit	0.12	AT4G18780.1	IRX1 TAIR Show fit	cellulose synthase family protein
arTal_v1_Chr5_+_17714390_17714390 Show fit	0.08	AT5G44030.2 AT5G44030.1	CESA4 TAIR Show fit	cellulose synthase A4
arTal_v1_Chr4_+_18296388_18296388 Show fit	0.08	AT4G39350.1	CESA2 TAIR Show fit	cellulose synthase A2
arTal_v1_Chr5_-_1535558_1535558 Show fit	0.06	AT5G05170.1	CEV1 TAIR Show fit	Cellulose synthase family protein
arTal_v1_Chr2_+_9284391_9284391 Show fit	0.06	AT2G21770.1	CESA9 TAIR Show fit	cellulose synthase A9
arTal_v1_Chr5_+_17715687_17715687 Show fit	0.06	AT5G44030.3	CESA4 TAIR Show fit	cellulose synthase A4
arTal_v1_Chr5_+_25881033_25881033 Show fit	0.05	AT5G64740.1	CESA6 TAIR Show fit	cellulose synthase 6
arTal_v1_Chr4_-_15646844_15646844 Show fit	0.03	AT4G32410.1	CESA1 TAIR Show fit	cellulose synthase 1
arTal_v1_Chr5_+_3072870_3072870 Show fit	0.03	AT5G09870.1	CESA5 TAIR Show fit	cellulose synthase 5
arTal_v1_Chr2_-_10872243_10872243 Show fit	0.02	AT2G25540.1	CESA10 TAIR Show fit	cellulose synthase A catalytic subunit 3 UDP-forming-like protein

Showing 1 to 10 of 10 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G19350

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	GO:0009833	plant-type primary cell wall biogenesis(GO:0009833)
0.0	0.1	GO:0010116	positive regulation of abscisic acid biosynthetic process(GO:0010116)

Showing 1 to 2 of 2 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:0010330	cellulose synthase complex(GO:0010330)

Showing 1 to 1 of 1 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.6	GO:0016760	cellulose synthase (UDP-forming) activity(GO:0016760)

Showing 1 to 1 of 1 entries

Results for AT1G19350

Z-value: 0.16

Transcription factors associated with AT1G19350

Activity-expression correlation:

Activity profile of AT1G19350 motif

Sorted Z-values of AT1G19350 motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G19350

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: