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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G19000

Z-value: 1.17

Transcription factors associated with AT1G19000

Gene Symbol Gene ID Gene Info
AT1G19000
AT1G19000 Homeodomain-like superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT1G19000arTal_v1_Chr1_-_6562786_65627910.078.1e-01Click!

Activity profile of AT1G19000 motif

Sorted Z-values of AT1G19000 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_9829261 1.89 AT1G28135.1
AT1G28135
hypothetical protein
Chr2_+_18347765 1.70 AT2G44460.2
BGLU28
beta glucosidase 28
Chr2_+_18346306 1.66 AT2G44460.1
BGLU28
beta glucosidase 28
Chr5_+_6566271 1.49 AT5G19470.1
AT5G19470.2
NUDT24
nudix hydrolase homolog 24
Chr4_+_11150049 1.48 AT4G20820.1
AT4G20820
FAD-binding Berberine family protein
Chr5_-_8181107 1.48 AT5G24155.2
AT5G24155.3
AT5G24155.1
AT5G24155
FAD/NAD(P)-binding oxidoreductase family protein
Chr2_+_12588191 1.46 AT2G29300.2
AT2G29300.1
AT2G29300
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_-_19807853 1.38 AT5G48850.1
ATSDI1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_19183523 1.37 AT5G47240.2
AT5G47240.1
NUDT8
nudix hydrolase homolog 8
Chr2_-_1007186 1.34 AT2G03310.1
AT2G03310
transmembrane protein
Chr1_+_28251626 1.32 AT1G75280.1
AT1G75280
NmrA-like negative transcriptional regulator family protein
Chr5_-_8186662 1.30 AT5G24160.2
AT5G24160.1
SQE6
squalene monooxygenase 6
Chr5_-_23308680 1.28 AT5G57560.1
TCH4
Xyloglucan endotransglucosylase/hydrolase family protein
Chr1_-_4682309 1.28 AT1G13650.3
AT1G13650.4
AT1G13650.2
AT1G13650.1
AT1G13650
hypothetical protein
Chr5_+_6833564 1.27 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
Chr2_+_16011233 1.22 AT2G38230.1
PDX1.1
pyridoxine biosynthesis 1.1
Chr2_+_17409370 1.21 AT2G41730.1
AT2G41730
calcium-binding site protein
Chr3_+_9827682 1.19 AT3G26740.1
CCL
CCR-like protein
Chr1_+_28143851 1.18 AT1G74930.1
ORA47
Integrase-type DNA-binding superfamily protein
Chr3_+_10538005 1.17 AT3G28270.2
AT3G28270.1
AT3G28270
transmembrane protein, putative (DUF677)
Chr4_+_10481619 1.16 AT4G19170.1
NCED4
nine-cis-epoxycarotenoid dioxygenase 4
Chr2_+_9254378 1.15 AT2G21640.1
AT2G21640
marker for oxidative stress response protein
Chr1_+_24824356 1.14 AT1G66540.1
AT1G66540.2
AT1G66540
Cytochrome P450 superfamily protein
Chr1_-_19493122 1.12 AT1G52342.1
AT1G52342
hypothetical protein
Chr2_-_15425129 1.11 AT2G36800.1
DOGT1
don-glucosyltransferase 1
Chr4_-_8854706 1.11 AT4G15490.1
UGT84A3
UDP-Glycosyltransferase superfamily protein
Chr3_+_17051520 1.11 AT3G46370.1
AT3G46370.2
AT3G46370
Leucine-rich repeat protein kinase family protein
Chr2_-_8913747 1.09 AT2G20670.1
AT2G20670
sugar phosphate exchanger, putative (DUF506)
Chr5_-_8186100 1.09 AT5G24160.3
SQE6
squalene monooxygenase 6
Chr4_-_10591546 1.08 AT4G19420.3
AT4G19420.2
AT4G19420.1
AT4G19420
Pectinacetylesterase family protein
Chr2_-_16702336 1.05 AT2G40000.1
HSPRO2
ortholog of sugar beet HS1 PRO-1 2
Chr1_+_26705420 1.04 AT1G70820.1
AT1G70820.2
AT1G70820
phosphoglucomutase, putative / glucose phosphomutase
Chr1_-_28919764 1.04 AT1G76955.1
AT1G76955
Expressed protein
Chr1_-_4066344 1.04 AT1G12030.1
AT1G12030
phosphoenolpyruvate carboxylase, putative (DUF506)
Chr4_-_17672353 1.03 AT4G37610.1
BT5
BTB and TAZ domain protein 5
Chr3_-_3091766 1.03 AT3G10020.2
AT3G10020
plant/protein
Chr4_+_13391293 1.02 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
Chr3_+_1172687 1.02 AT3G04420.2
AT3G04420.1
NAC048
NAC domain containing protein 48
Chr5_+_6414488 1.01 AT5G19120.1
AT5G19120
Eukaryotic aspartyl protease family protein
Chr2_+_12326808 1.00 AT2G28720.1
AT2G28720
Histone superfamily protein
Chr4_+_13390754 1.00 AT4G26530.3
FBA5
Aldolase superfamily protein
Chr5_+_21352557 1.00 AT5G52640.1
HSP90.1
heat shock-like protein
Chr1_-_26796529 0.98 AT1G71030.1
AT1G71030.2
MYBL2
MYB-like 2
Chr1_-_23137254 0.98 AT1G62510.1
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_30404713 0.98 AT1G80920.1
J8
Chaperone DnaJ-domain superfamily protein
Chr1_-_2190784 0.98 AT1G07135.1
AT1G07135
glycine-rich protein
Chr2_-_14146471 0.98 AT2G33380.2
AT2G33380.1
RD20
Caleosin-related family protein
Chr1_+_2984829 0.97 AT1G09240.1
NAS3
nicotianamine synthase 3
Chr3_+_4914789 0.97 AT3G14620.1
CYP72A8
cytochrome P450, family 72, subfamily A, polypeptide 8
Chr4_-_5648727 0.96 AT4G08870.2
AT4G08870.1
ARGAH2
Arginase/deacetylase superfamily protein
Chr3_+_6465748 0.96 AT3G18773.1
AT3G18773
RING/U-box superfamily protein
Chr4_-_468294 0.94 AT4G01080.1
TBL26
TRICHOME BIREFRINGENCE-LIKE 26
Chr3_-_3091922 0.93 AT3G10020.1
AT3G10020
plant/protein
Chr4_-_9497313 0.92 AT4G16880.1
AT4G16880
Leucine-rich repeat (LRR) family protein
Chr4_-_10590700 0.92 AT4G19420.4
AT4G19420
Pectinacetylesterase family protein
Chr1_+_27736546 0.92 AT1G73750.2
AT1G73750.1
AT1G73750
alpha/beta hydrolase family protein
Chr1_-_25176230 0.92 AT1G67265.1
RTFL21
ROTUNDIFOLIA like 21
Chr4_-_6632641 0.91 AT4G10770.2
AT4G10770.1
OPT7
oligopeptide transporter 7
Chr3_-_9712826 0.91 AT3G26510.5
AT3G26510.4
AT3G26510.1
AT3G26510.6
AT3G26510
Octicosapeptide/Phox/Bem1p family protein
Chr1_-_19385533 0.91 AT1G52100.1
AT1G52100.3
AT1G52100.4
AT1G52100.2
AT1G52100.5
AT1G52100
Mannose-binding lectin superfamily protein
Chr5_+_16727530 0.91 AT5G41790.1
CIP1
COP1-interactive protein 1
Chr3_-_9712659 0.91 AT3G26510.3
AT3G26510.7
AT3G26510.2
AT3G26510
Octicosapeptide/Phox/Bem1p family protein
Chr3_-_21293158 0.90 AT3G57520.2
AT3G57520.3
AT3G57520.1
SIP2
seed imbibition 2
Chr3_+_22142856 0.90 AT3G59940.1
AT3G59940
Galactose oxidase/kelch repeat superfamily protein
Chr1_+_15976805 0.90 AT1G42550.1
PMI1
plastid movement impaired1
Chr4_-_16168711 0.90 AT4G33660.1
AT4G33660
cysteine-rich TM module stress tolerance protein
Chr2_-_10737800 0.90 AT2G25200.1
AT2G25200
hypothetical protein (DUF868)
Chr1_-_9140439 0.90 AT1G26410.1
AT1G26410
FAD-binding Berberine family protein
Chr5_+_25523827 0.89 AT5G63780.1
SHA1
RING/FYVE/PHD zinc finger superfamily protein
Chr2_+_12589866 0.89 AT2G29310.3
AT2G29310.1
AT2G29310.2
AT2G29310.4
AT2G29310
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_19052582 0.89 AT1G51400.1
AT1G51400
Photosystem II 5 kD protein
Chr3_-_6350832 0.89 AT3G18490.1
ASPG1
Eukaryotic aspartyl protease family protein
Chr4_+_15676240 0.88 AT4G32480.1
AT4G32480
sugar phosphate exchanger, putative (DUF506)
Chr2_-_6493512 0.88 AT2G15020.1
AT2G15020
hypothetical protein
Chr4_-_17831619 0.88 AT4G37925.1
NdhM
subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex
Chr1_+_10723454 0.88 AT1G30390.1
AT1G30390

Chr4_+_15804784 0.87 AT4G32770.1
VTE1
tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)
Chr3_+_14676967 0.87 AT3G42556.1
AT3G42556

Chr2_-_8370675 0.87 AT2G19310.1
AT2G19310
HSP20-like chaperones superfamily protein
Chr1_-_1337849 0.86 AT1G04770.1
AT1G04770
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_8217191 0.86 AT5G24210.1
AT5G24210.2
AT5G24210.3
AT5G24210
alpha/beta-Hydrolases superfamily protein
Chr5_+_25524045 0.86 AT5G63780.2
SHA1
RING/FYVE/PHD zinc finger superfamily protein
Chr2_+_10995095 0.86 AT2G25780.1
AT2G25780
hypothetical protein (DUF1677)
Chr3_+_6876043 0.86 AT3G19800.1
AT3G19800.2
AT3G19800
E3 ubiquitin-protein ligase, putative (DUF177)
Chr1_-_5181374 0.84 AT1G15040.2
AT1G15040.1
GAT1_2.1
Class I glutamine amidotransferase-like superfamily protein
Chr5_-_16195751 0.84 AT5G40450.2
AT5G40450.1
AT5G40450
A-kinase anchor-like protein
Chr2_-_8533779 0.84 AT2G19800.1
MIOX2
myo-inositol oxygenase 2
Chr2_+_13036814 0.83 AT2G30600.4
AT2G30600.5
AT2G30600.1
AT2G30600.3
AT2G30600
BTB/POZ domain-containing protein
Chr3_+_8918679 0.83 AT3G24500.2
MBF1C
multiprotein bridging factor 1C
Chr1_-_24421361 0.83 AT1G65660.1
SMP1
Pre-mRNA splicing Prp18-interacting factor
Chr3_-_3993886 0.83 AT3G12580.1
HSP70
heat shock protein 70
Chr1_-_26770175 0.82 AT1G71000.1
AT1G71000.2
AT1G71000
Chaperone DnaJ-domain superfamily protein
Chr5_+_13689817 0.82 AT5G35490.1
MRU1
mto 1 responding up 1
Chr2_+_13037238 0.82 AT2G30600.6
AT2G30600.2
AT2G30600
BTB/POZ domain-containing protein
Chr4_-_7893727 0.82 AT4G13575.1
AT4G13575.2
AT4G13575
hypothetical protein
Chr4_+_13307461 0.81 AT4G26288.1
AT4G26288
hypothetical protein
Chr2_-_11394363 0.81 AT2G26740.1
SEH
soluble epoxide hydrolase
Chr5_+_5497524 0.81 AT5G16730.1
AT5G16730
weak chloroplast movement under blue light protein (DUF827)
Chr1_-_9973942 0.81 AT1G28400.1
AT1G28400
GATA zinc finger protein
Chr3_+_8918267 0.80 AT3G24500.1
MBF1C
multiprotein bridging factor 1C
Chr4_+_17388649 0.80 AT4G36900.1
RAP2.10
related to AP2 10
Chr3_-_1763348 0.79 AT3G05900.2
AT3G05900
neurofilament protein-like protein
Chr1_-_5277689 0.79 AT1G15340.2
MBD10
methyl-CPG-binding domain 10
Chr1_-_754262 0.79 AT1G03130.1
PSAD-2
photosystem I subunit D-2
Chr2_-_16545746 0.79 AT2G39700.1
EXPA4
expansin A4
Chr1_-_5277869 0.79 AT1G15340.1
MBD10
methyl-CPG-binding domain 10
Chr4_-_7026224 0.78 AT4G11650.1
OSM34
osmotin 34
Chr2_+_10559173 0.78 AT2G24762.1
GDU4
glutamine dumper 4
Chr1_+_6945695 0.78 AT1G20030.1
AT1G20030
Pathogenesis-related thaumatin superfamily protein
Chr4_-_13958107 0.77 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_2133918 0.77 AT5G06870.1
PGIP2
polygalacturonase inhibiting protein 2
Chr3_+_59423 0.77 AT3G01175.1
AT3G01175
transmembrane protein
Chr1_-_9649323 0.77 AT1G27730.1
STZ
salt tolerance zinc finger
Chr1_-_21235292 0.77 AT1G56650.1
PAP1
production of anthocyanin pigment 1
Chr3_-_2699257 0.77 AT3G08860.2
PYD4
PYRIMIDINE 4
Chr5_-_20801437 0.76 AT5G51190.1
AT5G51190
Integrase-type DNA-binding superfamily protein
Chr3_-_2699420 0.76 AT3G08860.1
PYD4
PYRIMIDINE 4
Chr3_+_8383331 0.75 AT3G23410.2
FAO3
fatty alcohol oxidase 3
Chr1_+_6945425 0.75 AT1G20030.2
AT1G20030
Pathogenesis-related thaumatin superfamily protein
Chr4_-_18275017 0.75 AT4G39260.4
AT4G39260.3
AT4G39260.2
AT4G39260.1
CCR1
cold, circadian rhythm, and RNA binding 1
Chr2_-_18811085 0.74 AT2G45660.2
AT2G45660.1
AGL20
AGAMOUS-like 20
Chr3_+_5979814 0.74 AT3G17470.2
AT3G17470.3
AT3G17470.1
CRSH
Ca2+-activated RelA/spot-like protein
Chr1_-_29622445 0.74 AT1G78780.1
AT1G78780.2
AT1G78780.4
AT1G78780
pathogenesis-related family protein
Chr5_+_3124568 0.73 AT5G09990.1
PROPEP5
elicitor peptide 5 precursor
Chr3_+_3474922 0.73 AT3G11090.1
LBD21
LOB domain-containing protein 21
Chr2_+_239669 0.73 AT2G01530.1
MLP329
MLP-like protein 329
Chr1_-_27456949 0.72 AT1G72980.1
LBD7
LOB domain-containing protein 7
Chr4_+_7004265 0.72 AT4G11570.2
AT4G11570.1
AT4G11570
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr1_+_21887588 0.71 AT1G59590.1
ZCF37
ZCF37
Chr1_-_26474786 0.70 AT1G70290.2
AT1G70290.1
TPS8
trehalose-6-phosphatase synthase S8
Chr2_+_15890869 0.70 AT2G37970.1
SOUL-1
SOUL heme-binding family protein
Chr3_-_6143310 0.70 AT3G17930.1
DAC
transmembrane protein
Chr2_+_1679307 0.70 AT2G04790.10
AT2G04790.6
AT2G04790.5
AT2G04790.7
AT2G04790.9
AT2G04790.8
AT2G04790.13
AT2G04790.12
AT2G04790.11
AT2G04790.14
AT2G04790.15
AT2G04790.16
AT2G04790.4
AT2G04790.3
AT2G04790.1
AT2G04790.2
AT2G04790
PTB domain engulfment adapter
Chr3_-_1763984 0.69 AT3G05900.1
AT3G05900
neurofilament protein-like protein
Chr1_-_12351229 0.69 AT1G33970.1
AT1G33970.2
AT1G33970.5
AT1G33970.4
AT1G33970.3
AT1G33970
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_+_17852441 0.69 AT4G37980.2
AT4G37980.1
ELI3-1
cinnamyl alcohol dehydrogenase 7
Chr3_-_5181537 0.69 AT3G15353.1
AT3G15353.2
MT3
metallothionein 3
Chr4_-_6302744 0.68 AT4G10080.1
AT4G10080
transmembrane protein
Chr2_-_761013 0.68 AT2G02710.2
AT2G02710.3
AT2G02710.4
AT2G02710.1
PLPB
PAS/LOV protein B
Chr2_+_17854557 0.68 AT2G42900.1
AT2G42900
Plant basic secretory protein (BSP) family protein
Chr1_-_28024860 0.68 AT1G74590.1
GSTU10
glutathione S-transferase TAU 10
Chr2_+_13809019 0.68 AT2G32530.1
CSLB03
cellulose synthase-like B3
Chr5_+_7168106 0.68 AT5G21100.1
AT5G21100
Plant L-ascorbate oxidase
Chr4_-_8977434 0.68 AT4G15765.5
AT4G15765.4
AT4G15765.3
AT4G15765.2
AT4G15765
FAD/NAD(P)-binding oxidoreductase family protein
Chr3_+_8382672 0.67 AT3G23410.1
FAO3
fatty alcohol oxidase 3
Chr1_+_25493193 0.67 AT1G68010.1
AT1G68010.2
AT1G68010.3
HPR
hydroxypyruvate reductase
Chr1_+_21030787 0.67 AT1G56200.1
AT1G56200.2
EMB1303
embryo defective 1303
Chr3_-_9580086 0.67 AT3G26180.2
AT3G26180.1
CYP71B20
cytochrome P450, family 71, subfamily B, polypeptide 20
Chr1_+_7146636 0.67 AT1G20630.1
CAT1
catalase 1
Chr1_-_13698739 0.67 AT1G36370.1
SHM7
serine hydroxymethyltransferase 7
Chr4_+_7472006 0.67 AT4G12670.2
AT4G12670.1
AT4G12670
Homeodomain-like superfamily protein
Chr2_+_9792166 0.67 AT2G23000.2
AT2G23000.1
scpl10
serine carboxypeptidase-like 10
Chr1_-_6152222 0.67 AT1G17870.1
EGY3
ethylene-dependent gravitropism-deficient and yellow-green-like 3
Chr5_-_10933061 0.67 AT5G28910.2
AT5G28910.1
AT5G28910
alpha-(1,6)-fucosyltransferase
Chr3_-_11400332 0.67 AT3G29590.1
AT5MAT
HXXXD-type acyl-transferase family protein
Chr1_+_24677121 0.66 AT1G66230.1
MYB20
myb domain protein 20
Chr4_+_8344349 0.66 AT4G14540.1
NF-YB3
nuclear factor Y, subunit B3
Chr1_+_24028830 0.66 AT1G64660.1
MGL
methionine gamma-lyase
Chr2_-_9077048 0.66 AT2G21185.1
AT2G21185
transmembrane protein
Chr4_+_2324878 0.66 AT4G04610.1
APR1
APS reductase 1
Chr1_-_18617155 0.66 AT1G50250.1
FTSH1
FTSH protease 1
Chr1_+_30359649 0.66 AT1G80790.2
AT1G80790.1
AT1G80790.3
FDM5
XH/XS domain-containing protein
Chr2_+_14577083 0.65 AT2G34620.1
AT2G34620
Mitochondrial transcription termination factor family protein
Chr1_-_25156389 0.65 AT1G67230.1
LINC1
little nuclei1
Chr3_+_18465318 0.65 AT3G49780.1
PSK4
phytosulfokine 4 precursor
Chr1_+_23887809 0.65 AT1G64360.1
AT1G64360
hypothetical protein
Chr1_+_27233418 0.65 AT1G72330.1
AT1G72330.3
AT1G72330.2
ALAAT2
alanine aminotransferase 2
Chr1_-_9935264 0.65 AT1G28330.3
AT1G28330.2
AT1G28330.4
AT1G28330.1
AT1G28330.6
AT1G28330.5
DYL1
dormancy-associated protein-like 1
Chr1_+_8168443 0.65 AT1G23050.1
AT1G23050
hydroxyproline-rich glycoprotein family protein
Chr1_+_630374 0.65 AT1G02850.3
AT1G02850.2
AT1G02850.1
AT1G02850.5
AT1G02850.4
BGLU11
beta glucosidase 11
Chr4_-_17050608 0.65 AT4G36040.1
J11
Chaperone DnaJ-domain superfamily protein
Chr2_+_16507882 0.65 AT2G39570.1
ACR9
ACT domain-containing protein
Chr3_-_20086967 0.65 AT3G54260.1
TBL36
TRICHOME BIREFRINGENCE-LIKE 36
Chr1_+_2001382 0.65 AT1G06530.1
PMD2
Tropomyosin-like protein
Chr1_-_4358894 0.65 AT1G12780.1
UGE1
UDP-D-glucose/UDP-D-galactose 4-epimerase 1
Chr3_-_6093151 0.65 AT3G17800.2
AT3G17800.1
AT3G17800
alanine-tRNA ligase, putative (DUF760)
Chr5_-_20016857 0.64 AT5G49360.1
BXL1
beta-xylosidase 1
Chr1_-_8310916 0.64 AT1G23390.1
AT1G23390
Kelch repeat-containing F-box family protein
Chr5_+_22175461 0.64 AT5G54585.1
AT5G54585
hypothetical protein
Chr5_+_26311587 0.64 AT5G65770.2
AT5G65770.1
LINC4
little nuclei4
Chr4_+_2445775 0.64 AT4G04830.1
AT4G04830.2
MSRB5
methionine sulfoxide reductase B5
Chr3_+_23090944 0.64 AT3G62410.1
CP12-2
CP12 domain-containing protein 2
Chr3_+_16525245 0.64 AT3G45140.1
AT3G45140.2
LOX2
lipoxygenase 2
Chr4_-_14002069 0.64 AT4G28250.2
AT4G28250.3
AT4G28250.4
AT4G28250.1
EXPB3
expansin B3
Chr5_-_23230749 0.64 AT5G57345.1
AT5G57345
transmembrane protein
Chr1_-_19690589 0.64 AT1G52880.1
NAM
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr5_-_20720681 0.63 AT5G50920.1
CLPC1
CLPC homologue 1
Chr5_-_2062027 0.63 AT5G06690.3
AT5G06690.2
AT5G06690.1
AT5G06690.4
WCRKC1
WCRKC thioredoxin 1
Chr5_+_16725753 0.63 AT5G41790.2
CIP1
COP1-interactive protein 1
Chr1_-_9286395 0.63 AT1G26800.1
AT1G26800
RING/U-box superfamily protein
Chr2_+_12597018 0.63 AT2G29340.2
AT2G29340.1
AT2G29340.3
AT2G29340.4
AT2G29340
NAD-dependent epimerase/dehydratase family protein
Chr4_-_13729002 0.63 AT4G27450.1
AT4G27450
aluminum induced protein with YGL and LRDR motifs
Chr1_-_10326848 0.63 AT1G29530.1
AT1G29530
hypothetical protein
Chr1_-_20025541 0.62 AT1G53640.1
AT1G53640
transmembrane protein
Chr2_+_13647699 0.62 AT2G32100.1
OFP16
ovate family protein 16
Chr3_-_1457150 0.62 AT3G05160.2
AT3G05160.1
AT3G05160.3
AT3G05160
Major facilitator superfamily protein
Chr3_-_1832190 0.62 AT3G06070.1
AT3G06070
hypothetical protein
Chr4_+_13828189 0.62 AT4G27710.1
CYP709B3
cytochrome P450, family 709, subfamily B, polypeptide 3
Chr4_+_13828422 0.62 AT4G27710.2
CYP709B3
cytochrome P450, family 709, subfamily B, polypeptide 3
Chr5_+_9648508 0.62 AT5G27350.1
SFP1
Major facilitator superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G19000

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.9 GO:0097298 regulation of nucleus size(GO:0097298)
0.5 3.7 GO:0009061 anaerobic respiration(GO:0009061)
0.4 1.3 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.3 1.4 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.3 1.0 GO:0018119 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.3 1.0 GO:0000050 urea cycle(GO:0000050)
0.3 1.6 GO:1904589 regulation of protein import(GO:1904589)
0.3 1.4 GO:0019310 inositol catabolic process(GO:0019310)
0.3 0.9 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.3 0.8 GO:0033530 raffinose metabolic process(GO:0033530)
0.3 0.8 GO:0051639 actin filament network formation(GO:0051639)
0.3 1.1 GO:0097438 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.3 0.8 GO:0009915 phloem sucrose loading(GO:0009915)
0.3 1.0 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.3 1.3 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.2 0.2 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.2 3.8 GO:0015976 carbon utilization(GO:0015976)
0.2 0.9 GO:0080003 thalianol metabolic process(GO:0080003)
0.2 1.4 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.2 1.2 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.2 2.9 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.2 3.9 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.2 0.6 GO:0009202 deoxyribonucleoside triphosphate biosynthetic process(GO:0009202) pyrimidine deoxyribonucleoside triphosphate metabolic process(GO:0009211) pyrimidine deoxyribonucleotide metabolic process(GO:0009219) pyrimidine deoxyribonucleotide biosynthetic process(GO:0009221) 2'-deoxyribonucleotide biosynthetic process(GO:0009265) deoxyribose phosphate biosynthetic process(GO:0046385)
0.2 0.6 GO:0010110 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.2 0.4 GO:0042819 vitamin B6 biosynthetic process(GO:0042819) pyridoxal phosphate metabolic process(GO:0042822) pyridoxal phosphate biosynthetic process(GO:0042823)
0.2 1.5 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.2 0.6 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.2 0.8 GO:0035264 multicellular organism growth(GO:0035264)
0.2 1.4 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.2 0.8 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.2 1.8 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.2 1.0 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.2 0.8 GO:0015720 allantoin transport(GO:0015720)
0.2 0.6 GO:0010062 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.2 0.9 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.2 0.9 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.2 0.4 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.2 0.5 GO:0010198 synergid death(GO:0010198)
0.2 0.5 GO:0010269 response to selenium ion(GO:0010269)
0.2 0.5 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.2 1.0 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.2 0.5 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.2 1.0 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.2 0.7 GO:0090065 regulation of production of siRNA involved in RNA interference(GO:0090065)
0.2 0.8 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.2 0.7 GO:1901404 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.2 1.3 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.2 0.5 GO:0045827 negative regulation of isoprenoid metabolic process(GO:0045827)
0.2 0.7 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 0.3 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.2 0.8 GO:0060919 auxin influx(GO:0060919)
0.2 2.7 GO:0090056 regulation of chlorophyll metabolic process(GO:0090056)
0.2 0.9 GO:0009745 sucrose mediated signaling(GO:0009745)
0.2 0.5 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.2 1.2 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 1.3 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 1.0 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.1 0.7 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 1.0 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 1.2 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.1 0.4 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.1 0.4 GO:0010045 response to nickel cation(GO:0010045)
0.1 0.4 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.1 0.7 GO:0051289 protein homotetramerization(GO:0051289)
0.1 1.0 GO:0097437 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.1 0.5 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.1 1.2 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.1 0.5 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.1 0.8 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.1 0.7 GO:0019419 sulfate reduction(GO:0019419)
0.1 0.3 GO:0019859 pyrimidine nucleobase catabolic process(GO:0006208) thymine catabolic process(GO:0006210) thymine metabolic process(GO:0019859)
0.1 0.4 GO:0046521 sphingoid catabolic process(GO:0046521)
0.1 0.5 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.1 2.7 GO:0005983 starch catabolic process(GO:0005983)
0.1 0.4 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 0.6 GO:0046493 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.1 0.4 GO:0009228 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.1 0.5 GO:0030417 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.1 0.5 GO:0010731 protein glutathionylation(GO:0010731)
0.1 0.6 GO:0019323 pentose catabolic process(GO:0019323)
0.1 0.2 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.1 0.3 GO:0090143 nucleoid organization(GO:0090143)
0.1 0.3 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.1 0.6 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.3 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.1 1.3 GO:0015749 monosaccharide transport(GO:0015749)
0.1 0.2 GO:0019695 choline metabolic process(GO:0019695)
0.1 0.4 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.1 0.3 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.1 0.7 GO:0071168 protein localization to chromatin(GO:0071168)
0.1 0.4 GO:0001112 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.1 1.0 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 0.2 GO:0090342 regulation of cell aging(GO:0090342)
0.1 1.2 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 0.3 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.1 0.7 GO:0042981 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.1 0.6 GO:0042360 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.1 0.3 GO:0031114 N-terminal protein lipidation(GO:0006498) N-terminal protein myristoylation(GO:0006499) protein myristoylation(GO:0018377) regulation of microtubule depolymerization(GO:0031114) cellular response to copper ion(GO:0071280) cellular response to iron ion(GO:0071281) intracellular transport of virus(GO:0075733)
0.1 1.7 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.1 0.3 GO:0046740 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.1 0.8 GO:0016045 detection of bacterium(GO:0016045)
0.1 0.3 GO:0090547 response to low humidity(GO:0090547)
0.1 0.3 GO:0033120 positive regulation of RNA splicing(GO:0033120)
0.1 0.5 GO:0042549 photosystem II stabilization(GO:0042549)
0.1 0.5 GO:0060151 peroxisome localization(GO:0060151)
0.1 0.3 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.1 0.8 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 0.8 GO:0006266 DNA ligation(GO:0006266)
0.1 0.6 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 0.4 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.1 0.7 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.1 0.3 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.1 1.1 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.1 0.2 GO:0071457 cellular response to ozone(GO:0071457)
0.1 1.0 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.1 0.3 GO:0019499 cyanide metabolic process(GO:0019499)
0.1 0.5 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.1 0.4 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.1 0.7 GO:1901002 positive regulation of response to salt stress(GO:1901002)
0.1 0.3 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
0.1 0.2 GO:1901562 response to paraquat(GO:1901562)
0.1 0.2 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.1 0.7 GO:0042853 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.1 0.4 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.1 0.2 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.1 0.3 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.1 0.1 GO:0090549 response to carbon starvation(GO:0090549)
0.1 0.2 GO:0010454 negative regulation of cell fate commitment(GO:0010454)
0.1 0.3 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 1.4 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 0.2 GO:0043407 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
0.1 0.9 GO:0016122 xanthophyll metabolic process(GO:0016122)
0.1 0.1 GO:0042908 xenobiotic transport(GO:0042908)
0.1 0.2 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.1 0.3 GO:0031929 TOR signaling(GO:0031929)
0.1 0.5 GO:0043617 cellular response to sucrose starvation(GO:0043617)
0.1 1.0 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.1 0.5 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.1 0.4 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.1 0.1 GO:0000710 meiotic mismatch repair(GO:0000710)
0.1 3.3 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.1 0.4 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.1 0.8 GO:0048317 seed morphogenesis(GO:0048317)
0.1 0.4 GO:0005980 glycogen catabolic process(GO:0005980)
0.1 0.2 GO:0030638 polyketide metabolic process(GO:0030638)
0.1 0.5 GO:0071490 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.1 0.7 GO:0050879 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.1 0.2 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.1 0.6 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.1 0.4 GO:0009584 detection of visible light(GO:0009584)
0.1 1.2 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.1 0.3 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.1 0.3 GO:0045046 protein import into peroxisome membrane(GO:0045046)
0.1 0.7 GO:0016558 protein import into peroxisome matrix(GO:0016558)
0.1 2.6 GO:0016126 sterol biosynthetic process(GO:0016126)
0.1 0.7 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 0.8 GO:0080086 stamen filament development(GO:0080086)
0.1 0.1 GO:0055089 fatty acid homeostasis(GO:0055089)
0.1 0.9 GO:0006949 syncytium formation(GO:0006949)
0.1 0.4 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.1 1.0 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 0.8 GO:0009704 de-etiolation(GO:0009704)
0.1 0.5 GO:0019253 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.1 2.3 GO:0019762 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.6 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.1 0.2 GO:0000012 single strand break repair(GO:0000012)
0.1 0.5 GO:0045815 positive regulation of gene expression, epigenetic(GO:0045815)
0.1 0.5 GO:0010230 alternative respiration(GO:0010230)
0.1 0.2 GO:2001293 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA metabolic process(GO:2001293) malonyl-CoA catabolic process(GO:2001294)
0.1 1.4 GO:0009083 branched-chain amino acid catabolic process(GO:0009083)
0.1 0.4 GO:0044211 CTP salvage(GO:0044211)
0.1 0.3 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.1 0.4 GO:0051125 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.1 0.6 GO:0009405 pathogenesis(GO:0009405)
0.1 0.2 GO:0009957 epidermal cell fate specification(GO:0009957)
0.1 0.2 GO:1903321 negative regulation of protein modification by small protein conjugation or removal(GO:1903321)
0.1 0.2 GO:0010185 regulation of cellular defense response(GO:0010185)
0.1 0.2 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.1 0.4 GO:0016233 telomere capping(GO:0016233)
0.1 0.4 GO:0090059 protoxylem development(GO:0090059)
0.1 0.2 GO:0048873 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.1 0.2 GO:0031441 negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA processing(GO:0050686) negative regulation of mRNA polyadenylation(GO:1900364) negative regulation of mRNA metabolic process(GO:1903312)
0.1 0.2 GO:0042550 photosystem I stabilization(GO:0042550)
0.1 0.5 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 0.3 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.1 2.3 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.1 0.2 GO:0009558 embryo sac cellularization(GO:0009558)
0.0 1.1 GO:0043488 regulation of mRNA stability(GO:0043488)
0.0 0.4 GO:0048859 formation of organ boundary(GO:0010160) formation of anatomical boundary(GO:0048859)
0.0 0.4 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.0 0.6 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.0 0.2 GO:0009557 antipodal cell differentiation(GO:0009557)
0.0 0.6 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.5 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.1 GO:0035865 response to potassium ion(GO:0035864) cellular response to potassium ion(GO:0035865)
0.0 0.2 GO:0001578 microtubule bundle formation(GO:0001578)
0.0 9.9 GO:0036294 cellular response to decreased oxygen levels(GO:0036294) cellular response to oxygen levels(GO:0071453) cellular response to hypoxia(GO:0071456)
0.0 0.2 GO:0006597 spermine biosynthetic process(GO:0006597)
0.0 0.2 GO:0043692 monoterpene metabolic process(GO:0043692)
0.0 0.4 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.0 0.2 GO:0035305 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.0 0.7 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.1 GO:0048629 trichome patterning(GO:0048629)
0.0 0.4 GO:0032351 negative regulation of hormone metabolic process(GO:0032351)
0.0 0.8 GO:0002213 defense response to insect(GO:0002213)
0.0 1.4 GO:0009902 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.0 0.2 GO:1902916 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.0 0.1 GO:1900369 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.0 0.9 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.3 GO:0010098 suspensor development(GO:0010098)
0.0 0.2 GO:0043484 regulation of RNA splicing(GO:0043484)
0.0 0.2 GO:0071836 nectar secretion(GO:0071836)
0.0 1.1 GO:0006284 base-excision repair(GO:0006284)
0.0 0.2 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.0 0.1 GO:1902932 positive regulation of alcohol biosynthetic process(GO:1902932)
0.0 2.2 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.0 0.2 GO:0035970 peptidyl-threonine dephosphorylation(GO:0035970)
0.0 0.2 GO:0042989 sequestering of actin monomers(GO:0042989)
0.0 0.2 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.0 0.1 GO:0071323 cellular response to chitin(GO:0071323)
0.0 0.4 GO:0010050 vegetative phase change(GO:0010050)
0.0 0.5 GO:0009785 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.1 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.0 0.4 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.0 0.2 GO:1900034 regulation of cellular response to heat(GO:1900034)
0.0 0.8 GO:0006521 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238)
0.0 0.1 GO:0009107 lipoate biosynthetic process(GO:0009107)
0.0 0.7 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.1 GO:0000256 allantoin catabolic process(GO:0000256)
0.0 0.2 GO:0007266 Rho protein signal transduction(GO:0007266)
0.0 0.1 GO:0010024 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.0 0.9 GO:0030091 protein repair(GO:0030091)
0.0 0.6 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 0.2 GO:0080190 lateral growth(GO:0080190)
0.0 0.9 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.1 GO:0070150 mitochondrial glycyl-tRNA aminoacylation(GO:0070150)
0.0 0.3 GO:0045740 positive regulation of DNA replication(GO:0045740)
0.0 0.4 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.3 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.0 3.6 GO:0010200 response to chitin(GO:0010200)
0.0 0.4 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.0 0.6 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.9 GO:0099515 actin filament-based transport(GO:0099515)
0.0 0.1 GO:0010500 transmitting tissue development(GO:0010500)
0.0 0.2 GO:0006013 mannose metabolic process(GO:0006013)
0.0 0.1 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.0 0.1 GO:0035494 SNARE complex disassembly(GO:0035494)
0.0 0.5 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.0 0.4 GO:0046654 tetrahydrofolate biosynthetic process(GO:0046654)
0.0 0.2 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.0 0.2 GO:0030104 water homeostasis(GO:0030104)
0.0 1.0 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.2 GO:2000576 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.0 0.2 GO:0051014 actin filament severing(GO:0051014)
0.0 0.2 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.2 GO:0040001 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.0 0.1 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.0 0.2 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.0 0.2 GO:0031333 negative regulation of protein complex assembly(GO:0031333)
0.0 0.1 GO:0042814 monopolar cell growth(GO:0042814)
0.0 0.1 GO:1902065 response to L-glutamate(GO:1902065)
0.0 0.1 GO:0035279 mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795)
0.0 0.1 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.0 0.6 GO:0006568 tryptophan metabolic process(GO:0006568) indolalkylamine metabolic process(GO:0006586)
0.0 0.1 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.0 0.1 GO:0060148 positive regulation of posttranscriptional gene silencing(GO:0060148)
0.0 0.4 GO:0010048 vernalization response(GO:0010048)
0.0 0.2 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.0 0.2 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.1 GO:0010055 atrichoblast differentiation(GO:0010055)
0.0 1.7 GO:0009875 pollen-pistil interaction(GO:0009875)
0.0 0.1 GO:0048479 style development(GO:0048479)
0.0 1.3 GO:0009809 lignin biosynthetic process(GO:0009809)
0.0 0.2 GO:0006624 vacuolar protein processing(GO:0006624)
0.0 0.6 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.0 0.4 GO:0045596 negative regulation of cell differentiation(GO:0045596)
0.0 0.2 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.2 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.0 0.8 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.0 0.2 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.0 0.1 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.0 0.4 GO:0046855 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.0 0.5 GO:0080022 primary root development(GO:0080022)
0.0 0.1 GO:0009871 jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway(GO:0009871)
0.0 0.2 GO:0071491 red light signaling pathway(GO:0010161) cellular response to red light(GO:0071491)
0.0 0.6 GO:0000380 alternative mRNA splicing, via spliceosome(GO:0000380)
0.0 0.5 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 0.1 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.9 GO:0045292 mRNA cis splicing, via spliceosome(GO:0045292)
0.0 0.1 GO:0051098 regulation of binding(GO:0051098)
0.0 0.4 GO:0051762 sesquiterpene metabolic process(GO:0051761) sesquiterpene biosynthetic process(GO:0051762)
0.0 0.2 GO:0001709 cell fate determination(GO:0001709)
0.0 0.3 GO:0042177 negative regulation of protein catabolic process(GO:0042177)
0.0 0.1 GO:0097036 regulation of plasma membrane sterol distribution(GO:0097036)
0.0 0.4 GO:0010193 response to ozone(GO:0010193)
0.0 0.3 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.0 0.8 GO:0051607 defense response to virus(GO:0051607)
0.0 0.5 GO:0010584 pollen exine formation(GO:0010584)
0.0 0.4 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 0.4 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.3 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 0.4 GO:0010091 trichome branching(GO:0010091)
0.0 0.2 GO:0006030 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.1 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.0 0.1 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.3 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.0 0.2 GO:0044375 regulation of peroxisome size(GO:0044375)
0.0 0.2 GO:0006265 DNA topological change(GO:0006265)
0.0 0.1 GO:0007143 female meiotic division(GO:0007143)
0.0 0.0 GO:0071486 cellular response to high light intensity(GO:0071486)
0.0 0.9 GO:0035825 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.0 0.4 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.0 0.2 GO:0036065 fucosylation(GO:0036065)
0.0 0.2 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.0 0.1 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.4 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.0 0.5 GO:0016102 diterpenoid biosynthetic process(GO:0016102)
0.0 0.1 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.0 0.1 GO:0030259 lipid glycosylation(GO:0030259)
0.0 0.3 GO:0030042 actin filament depolymerization(GO:0030042)
0.0 0.4 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.0 GO:0051646 mitochondrion localization(GO:0051646)
0.0 0.3 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.0 0.3 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.0 0.0 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.0 0.1 GO:0044848 cell cycle phase(GO:0022403) biological phase(GO:0044848) mitotic cell cycle phase(GO:0098763)
0.0 0.5 GO:0006749 glutathione metabolic process(GO:0006749)
0.0 0.1 GO:1904961 quiescent center organization(GO:1904961)
0.0 0.1 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.1 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.0 0.1 GO:0071049 nuclear mRNA surveillance of mRNA 3'-end processing(GO:0071031) CUT catabolic process(GO:0071034) CUT metabolic process(GO:0071043) nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription(GO:0071049)
0.0 0.1 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.0 0.1 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.0 GO:0006015 5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.0 0.6 GO:0006475 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.0 0.1 GO:0006560 proline metabolic process(GO:0006560)
0.0 0.5 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 0.1 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.0 0.3 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.0 0.3 GO:0010212 response to ionizing radiation(GO:0010212)
0.0 0.1 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.0 0.0 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.0 0.3 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.1 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.0 0.0 GO:0046506 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.0 0.0 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.0 0.1 GO:0035304 regulation of protein dephosphorylation(GO:0035304)
0.0 0.0 GO:0009799 specification of symmetry(GO:0009799)
0.0 0.3 GO:0042147 retrograde transport, endosome to Golgi(GO:0042147)
0.0 0.3 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.0 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.9 GO:0005652 nuclear lamina(GO:0005652)
0.3 0.8 GO:0032432 actin filament bundle(GO:0032432)
0.2 0.6 GO:0031897 Tic complex(GO:0031897)
0.2 1.6 GO:0009538 photosystem I reaction center(GO:0009538)
0.2 3.0 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.2 0.7 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.1 1.0 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.1 1.1 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 0.7 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.1 0.3 GO:0005775 vacuolar lumen(GO:0005775)
0.1 0.6 GO:0071818 BAT3 complex(GO:0071818)
0.1 0.3 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.1 4.2 GO:0010319 stromule(GO:0010319)
0.1 0.4 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.1 0.3 GO:0009501 amyloplast(GO:0009501)
0.1 1.0 GO:0010168 ER body(GO:0010168)
0.1 0.3 GO:0043673 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.1 0.5 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 0.3 GO:0030870 Mre11 complex(GO:0030870)
0.1 0.7 GO:0070390 transcription export complex 2(GO:0070390)
0.1 0.8 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.1 0.3 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.1 0.7 GO:0030014 CCR4-NOT complex(GO:0030014)
0.1 1.6 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.1 1.3 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 1.4 GO:0009508 plastid chromosome(GO:0009508)
0.1 0.4 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.1 0.4 GO:0031931 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.1 0.3 GO:0097344 Rix1 complex(GO:0097344)
0.1 0.3 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 0.9 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.1 0.5 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.1 0.2 GO:0009522 photosystem I(GO:0009522)
0.1 0.3 GO:0034657 GID complex(GO:0034657)
0.1 0.4 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.1 0.9 GO:0016459 myosin complex(GO:0016459)
0.1 2.9 GO:0010287 plastoglobule(GO:0010287)
0.0 0.3 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 0.2 GO:0005884 actin filament(GO:0005884)
0.0 0.4 GO:0000922 spindle pole(GO:0000922)
0.0 0.6 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.2 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.0 0.5 GO:0008278 cohesin complex(GO:0008278)
0.0 0.2 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 0.4 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.0 0.4 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.3 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.0 0.8 GO:0008023 transcription elongation factor complex(GO:0008023)
0.0 0.1 GO:1990415 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.0 0.8 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 0.1 GO:0030896 checkpoint clamp complex(GO:0030896)
0.0 0.2 GO:0030286 dynein complex(GO:0030286)
0.0 0.1 GO:0034457 Mpp10 complex(GO:0034457)
0.0 0.3 GO:0005675 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.0 0.4 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 0.1 GO:0043073 germ cell nucleus(GO:0043073)
0.0 0.3 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.2 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.1 GO:0070382 exocytic vesicle(GO:0070382)
0.0 0.4 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 1.2 GO:0000323 lytic vacuole(GO:0000323)
0.0 1.3 GO:0031977 thylakoid lumen(GO:0031977)
0.0 0.2 GO:0000346 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.0 0.1 GO:0000795 synaptonemal complex(GO:0000795)
0.0 0.1 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.0 7.2 GO:0042579 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.1 GO:0010445 nuclear dicing body(GO:0010445)
0.0 0.5 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.1 GO:0000938 GARP complex(GO:0000938)
0.0 0.1 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 1.4 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.1 GO:0032301 MutSalpha complex(GO:0032301)
0.0 0.2 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.0 0.1 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 1.2 GO:0016607 nuclear speck(GO:0016607)
0.0 0.2 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.0 0.1 GO:0032153 cell division site(GO:0032153)
0.0 0.8 GO:0031976 plastid thylakoid(GO:0031976)
0.0 0.1 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.0 3.1 GO:0042651 photosynthetic membrane(GO:0034357) thylakoid membrane(GO:0042651)
0.0 0.0 GO:0002189 ribose phosphate diphosphokinase complex(GO:0002189)
0.0 0.2 GO:0005791 rough endoplasmic reticulum(GO:0005791)
0.0 0.1 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.0 0.2 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.1 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.0 0.6 GO:0009707 chloroplast outer membrane(GO:0009707)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.6 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.4 1.8 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.4 3.5 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.4 1.3 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.4 1.2 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.3 1.4 GO:1901982 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.3 1.0 GO:0030275 LRR domain binding(GO:0030275)
0.3 1.0 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.3 1.0 GO:0050502 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.3 1.2 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.3 0.9 GO:0004557 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.3 0.9 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.3 1.5 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.3 1.4 GO:0050113 inositol oxygenase activity(GO:0050113)
0.3 0.8 GO:0000386 second spliceosomal transesterification activity(GO:0000386)
0.3 1.7 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.3 1.0 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.3 1.3 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.2 0.7 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.2 3.2 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.2 0.9 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.2 0.7 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.2 0.7 GO:0016643 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.2 2.3 GO:2001070 starch binding(GO:2001070)
0.2 1.0 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.2 0.6 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
0.2 0.4 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.2 0.4 GO:0004127 cytidylate kinase activity(GO:0004127)
0.2 0.7 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.2 1.0 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.2 0.7 GO:0043916 DNA-7-methylguanine glycosylase activity(GO:0043916)
0.2 0.7 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.2 0.5 GO:0004106 chorismate mutase activity(GO:0004106)
0.2 1.1 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.2 0.5 GO:0019776 Atg8 ligase activity(GO:0019776)
0.2 0.8 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.2 1.7 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.1 0.4 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.1 0.8 GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity(GO:0004021) alanine-oxo-acid transaminase activity(GO:0047635)
0.1 0.4 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.1 0.5 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.1 0.7 GO:0010313 phytochrome binding(GO:0010313)
0.1 1.0 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.1 0.8 GO:0015563 allantoin uptake transmembrane transporter activity(GO:0005274) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.1 0.5 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.1 0.7 GO:0003826 alpha-ketoacid dehydrogenase activity(GO:0003826)
0.1 0.4 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.5 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
0.1 0.4 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.1 0.4 GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.1 0.5 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.1 0.3 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.1 0.3 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.1 0.4 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.1 0.7 GO:0009041 uridylate kinase activity(GO:0009041)
0.1 0.3 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.1 0.5 GO:0008430 selenium binding(GO:0008430)
0.1 2.8 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 0.7 GO:0016815 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.1 0.7 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.4 GO:0070402 NADPH binding(GO:0070402)
0.1 0.3 GO:0000309 nicotinamide-nucleotide adenylyltransferase activity(GO:0000309)
0.1 1.0 GO:0015197 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.1 0.9 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.1 0.2 GO:0019137 thioglucosidase activity(GO:0019137)
0.1 0.8 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 1.7 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.1 1.5 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.1 0.4 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.1 0.4 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.1 0.4 GO:0004075 biotin carboxylase activity(GO:0004075)
0.1 0.4 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.1 0.5 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.1 0.6 GO:0016151 nickel cation binding(GO:0016151)
0.1 0.3 GO:0015292 uniporter activity(GO:0015292)
0.1 0.8 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.1 0.3 GO:0004528 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.1 1.0 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 1.0 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.1 0.3 GO:0010242 oxygen evolving activity(GO:0010242)
0.1 0.3 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.1 0.3 GO:0004556 alpha-amylase activity(GO:0004556)
0.1 0.3 GO:0030594 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.1 0.9 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.1 1.0 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.1 0.2 GO:0050997 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.1 0.9 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.1 0.7 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.1 0.3 GO:0052594 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.1 0.5 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.3 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.1 1.1 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.1 0.5 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.1 3.6 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 0.4 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.1 0.3 GO:0030523 dihydrolipoamide S-acyltransferase activity(GO:0030523)
0.1 0.2 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 2.2 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.1 0.1 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.1 0.3 GO:0080115 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.1 1.1 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 0.5 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.1 0.1 GO:0048256 flap endonuclease activity(GO:0048256)
0.1 0.3 GO:0004324 ferredoxin-NADP+ reductase activity(GO:0004324)
0.1 0.6 GO:0098847 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.1 0.2 GO:1990465 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.1 2.8 GO:0003713 transcription coactivator activity(GO:0003713)
0.1 0.4 GO:0052658 inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658)
0.1 0.2 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.1 0.4 GO:0004849 uridine kinase activity(GO:0004849)
0.1 0.4 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.1 0.1 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.1 0.5 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 0.4 GO:0071933 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.1 0.3 GO:0004096 catalase activity(GO:0004096)
0.1 0.3 GO:0070063 RNA polymerase binding(GO:0070063)
0.1 0.6 GO:0016161 beta-amylase activity(GO:0016161)
0.1 0.2 GO:0015026 coreceptor activity(GO:0015026)
0.1 0.8 GO:0030674 protein binding, bridging(GO:0030674)
0.1 0.3 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 0.3 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 0.6 GO:0008199 ferric iron binding(GO:0008199)
0.1 0.6 GO:0004860 protein kinase inhibitor activity(GO:0004860)
0.1 0.6 GO:0000990 transcription factor activity, core RNA polymerase binding(GO:0000990)
0.1 0.2 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 0.4 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.1 0.5 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.1 0.1 GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters(GO:0016888)
0.1 0.3 GO:0015166 myo-inositol transmembrane transporter activity(GO:0005365) myo-inositol:proton symporter activity(GO:0005366) polyol transmembrane transporter activity(GO:0015166)
0.1 0.3 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 0.1 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.1 GO:0004424 imidazoleglycerol-phosphate dehydratase activity(GO:0004424)
0.0 0.3 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.0 0.2 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.0 0.4 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.0 1.2 GO:0015925 beta-galactosidase activity(GO:0004565) galactosidase activity(GO:0015925)
0.0 0.5 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.7 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084)
0.0 0.2 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.0 1.3 GO:0009975 cyclase activity(GO:0009975)
0.0 0.6 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 0.8 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.1 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.0 0.7 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.2 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.0 0.1 GO:0033984 indole-3-glycerol-phosphate lyase activity(GO:0033984)
0.0 0.3 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.4 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.9 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 0.1 GO:0052381 tRNA dimethylallyltransferase activity(GO:0052381)
0.0 0.2 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.0 0.2 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.2 GO:0004325 ferrochelatase activity(GO:0004325)
0.0 0.3 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.0 0.1 GO:0050302 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.0 0.2 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.0 0.1 GO:0016979 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.0 0.3 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.0 0.4 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.0 0.1 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.0 0.4 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 0.4 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.4 GO:0010333 terpene synthase activity(GO:0010333)
0.0 1.1 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.2 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.0 1.8 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.2 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.0 0.5 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 1.9 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.5 GO:0008252 nucleotidase activity(GO:0008252)
0.0 0.8 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.3 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.2 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.2 GO:0045502 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.0 0.4 GO:0016307 phosphatidylinositol phosphate kinase activity(GO:0016307)
0.0 0.2 GO:0080025 phosphatidylinositol-3,5-bisphosphate binding(GO:0080025)
0.0 0.3 GO:0009916 alternative oxidase activity(GO:0009916)
0.0 1.1 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 1.3 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 0.1 GO:0015245 fatty acid transporter activity(GO:0015245)
0.0 1.2 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.0 0.1 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.0 0.2 GO:0004766 spermidine synthase activity(GO:0004766)
0.0 0.3 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.0 1.6 GO:0000988 transcription factor activity, protein binding(GO:0000988)
0.0 0.1 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.0 0.1 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.6 GO:0015248 sterol transporter activity(GO:0015248)
0.0 0.9 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.0 0.1 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.0 0.1 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.0 3.7 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.4 GO:0008061 chitin binding(GO:0008061)
0.0 1.5 GO:0070001 aspartic-type peptidase activity(GO:0070001)
0.0 0.2 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.0 0.1 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.0 0.1 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.0 0.5 GO:0008106 aldo-keto reductase (NADP) activity(GO:0004033) alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.0 0.8 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.0 0.3 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.1 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
0.0 0.1 GO:0008686 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.0 0.8 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 1.0 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.2 GO:0005047 signal recognition particle binding(GO:0005047)
0.0 1.0 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.2 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.6 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.3 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.2 GO:0001671 ATPase activator activity(GO:0001671)
0.0 0.1 GO:0001098 basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099)
0.0 0.4 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.0 0.1 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.0 0.1 GO:0004072 aspartate kinase activity(GO:0004072)
0.0 0.2 GO:0031177 phosphopantetheine binding(GO:0031177)
0.0 0.1 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.0 0.2 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.9 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.3 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 0.1 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.2 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 0.2 GO:0017025 TBP-class protein binding(GO:0017025)
0.0 0.1 GO:0032138 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.0 0.2 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.2 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.0 0.2 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.2 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.1 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.0 0.1 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 0.1 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.0 1.0 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.1 GO:0016463 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.0 0.1 GO:0047627 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.0 0.2 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.0 0.1 GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor(GO:0016647)
0.0 0.3 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.1 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.4 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.0 GO:0030941 chloroplast targeting sequence binding(GO:0030941)
0.0 0.3 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.2 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 1.8 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 0.1 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0 0.4 GO:0019208 phosphatase regulator activity(GO:0019208) protein phosphatase regulator activity(GO:0019888)
0.0 0.0 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.0 0.1 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.0 0.7 GO:0000987 core promoter proximal region sequence-specific DNA binding(GO:0000987) core promoter proximal region DNA binding(GO:0001159)
0.0 0.1 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.0 0.2 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.5 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.2 GO:0008066 glutamate receptor activity(GO:0008066)
0.0 0.1 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.1 GO:0051740 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 0.0 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.0 1.9 GO:0043531 ADP binding(GO:0043531)
0.0 0.2 GO:0016775 protein histidine kinase activity(GO:0004673) phosphotransferase activity, nitrogenous group as acceptor(GO:0016775)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.5 PID CMYB PATHWAY C-MYB transcription factor network
0.1 0.3 ST ERK1 ERK2 MAPK PATHWAY ERK1/ERK2 MAPK Pathway
0.1 0.3 PID SMAD2 3NUCLEAR PATHWAY Regulation of nuclear SMAD2/3 signaling
0.1 0.2 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.1 0.2 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.1 0.3 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.1 0.2 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.1 0.1 PID ATF2 PATHWAY ATF-2 transcription factor network
0.0 0.2 PID BARD1 PATHWAY BARD1 signaling events
0.0 0.4 PID E2F PATHWAY E2F transcription factor network
0.0 0.1 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.0 0.1 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.0 0.1 PID ARF 3PATHWAY Arf1 pathway
0.0 0.1 PID PLK1 PATHWAY PLK1 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.5 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.2 0.6 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.2 1.2 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.5 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.1 0.6 REACTOME GLUCOSE METABOLISM Genes involved in Glucose metabolism
0.1 0.3 REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA Genes involved in Processing of Capped Intron-Containing Pre-mRNA
0.1 0.2 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.1 0.3 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 0.7 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.1 0.6 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.4 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.0 0.4 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.0 0.1 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.0 0.1 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.0 0.2 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.1 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.0 0.1 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination