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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G16490

Z-value: 1.29

Transcription factors associated with AT1G16490

Gene Symbol Gene ID Gene Info
AT1G16490
AT1G16490 myb domain protein 58

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB58arTal_v1_Chr1_-_5630476_5630476-0.534.9e-02Click!

Activity profile of AT1G16490 motif

Sorted Z-values of AT1G16490 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_7434199 1.70 AT4G12545.1
AT4G12545
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_16998925 1.61 AT5G42510.1
AT5G42510
Disease resistance-responsive (dirigent-like protein) family protein
Chr1_+_4604688 1.50 AT1G13420.1
ST4B
sulfotransferase 4B
Chr4_+_7439115 1.42 AT4G12550.1
AIR1
Auxin-Induced in Root cultures 1
Chr3_-_1758807 1.35 AT3G05890.1
RCI2B
Low temperature and salt responsive protein family
Chr3_-_8589754 1.34 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr5_-_3172701 1.34 AT5G10130.1
AT5G10130
Pollen Ole e 1 allergen and extensin family protein
Chr4_+_2449434 1.33 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
Chr3_-_8007836 1.28 AT3G22600.1
AT3G22600
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_16431304 1.25 AT5G41040.1
AT5G41040.2
RWP1
HXXXD-type acyl-transferase family protein
Chr1_-_10127098 1.25 AT1G29025.1
AT1G29025
Calcium-binding EF-hand family protein
Chr2_-_15036556 1.23 AT2G35770.1
scpl28
serine carboxypeptidase-like 28
Chr3_-_6236091 1.20 AT3G18200.1
AT3G18200.2
UMAMIT4
nodulin MtN21 /EamA-like transporter family protein
Chr3_+_8008534 1.20 AT3G22620.1
AT3G22620
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_-_18581696 1.19 AT4G40090.1
AGP3
arabinogalactan protein 3
Chr4_-_9680389 1.18 AT4G17280.1
AT4G17280
Auxin-responsive family protein
Chr5_-_7805968 1.18 AT5G23190.1
CYP86B1
cytochrome P450, family 86, subfamily B, polypeptide 1
Chr3_-_17008528 1.17 AT3G46280.1
AT3G46280
kinase-like protein
Chr5_+_4370692 1.16 AT5G13580.1
ABCG6
ABC-2 type transporter family protein
Chr5_-_16252434 1.13 AT5G40590.1
AT5G40590
Cysteine/Histidine-rich C1 domain family protein
Chr4_+_15451988 1.10 AT4G31940.1
CYP82C4
cytochrome P450, family 82, subfamily C, polypeptide 4
Chr5_-_2365605 1.10 AT5G07475.1
AT5G07475
Cupredoxin superfamily protein
Chr3_+_9480746 1.07 AT3G25900.1
AT3G25900.3
AT3G25900.2
HMT-1
Homocysteine S-methyltransferase family protein
Chr3_+_957112 1.07 AT3G03780.1
AT3G03780.3
MS2
methionine synthase 2
Chr1_+_27188036 1.07 AT1G72230.1
AT1G72230
Cupredoxin superfamily protein
Chr1_+_19214072 1.06 AT1G51800.1
IOS1
Leucine-rich repeat protein kinase family protein
Chr1_+_6398531 1.05 AT1G18590.1
SOT17
sulfotransferase 17
Chr3_+_956862 1.04 AT3G03780.2
MS2
methionine synthase 2
Chr2_+_15445294 1.03 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr2_-_14295353 1.03 AT2G33790.1
AGP30
arabinogalactan protein 30
Chr3_-_16448844 1.02 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
Chr4_-_12339967 1.02 AT4G23690.1
DIR6
Disease resistance-responsive (dirigent-like protein) family protein
Chr5_-_5890218 1.02 AT5G17820.1
AT5G17820.2
AT5G17820
Peroxidase superfamily protein
Chr1_+_29130375 1.01 AT1G77520.1
AT1G77520
O-methyltransferase family protein
Chr4_-_11405235 1.00 AT4G21410.3
AT4G21410.2
CRK29
cysteine-rich RLK (RECEPTOR-like protein kinase) 29
Chr5_-_16236 0.99 AT5G01040.1
LAC8
laccase 8
Chr4_+_8646150 0.99 AT4G15160.2
AT4G15160.1
AT4G15160
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_4087689 0.99 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
Chr2_+_19437648 0.96 AT2G47360.1
AT2G47360
transmembrane protein
Chr1_-_27842132 0.95 AT1G74030.1
ENO1
enolase 1
Chr1_-_27865694 0.94 AT1G74100.1
SOT16
sulfotransferase 16
Chr1_+_2341447 0.94 AT1G07610.1
MT1C
metallothionein 1C
Chr4_+_18525246 0.94 AT4G39950.1
CYP79B2
cytochrome P450, family 79, subfamily B, polypeptide 2
Chr3_-_565801 0.94 AT3G02640.1
AT3G02640
transmembrane protein
Chr4_+_18525042 0.93 AT4G39950.2
CYP79B2
cytochrome P450, family 79, subfamily B, polypeptide 2
Chr4_-_11404650 0.93 AT4G21410.1
CRK29
cysteine-rich RLK (RECEPTOR-like protein kinase) 29
Chr5_+_16852628 0.92 AT5G42180.1
PER64
Peroxidase superfamily protein
Chr1_+_1529767 0.89 AT1G05260.1
RCI3
Peroxidase superfamily protein
Chr5_-_2041928 0.88 AT5G06640.2
AT5G06640.1
EXT10
Proline-rich extensin-like family protein
Chr1_-_8153530 0.88 AT1G23020.2
AT1G23020.7
AT1G23020.6
AT1G23020.5
AT1G23020.4
AT1G23020.3
AT1G23020.1
FRO3
ferric reduction oxidase 3
Chr1_-_4053871 0.88 AT1G12000.1
AT1G12000
Phosphofructokinase family protein
Chr5_-_4566988 0.88 AT5G14150.1
AT5G14150.2
AT5G14150
Emb:.1 protein, putative (Protein of unknown function, DUF642)
Chr4_+_6869863 0.88 AT4G11290.1
AT4G11290
Peroxidase superfamily protein
Chr2_+_9759595 0.87 AT2G22930.1
AT2G22930.2
AT2G22930
UDP-Glycosyltransferase superfamily protein
Chr4_-_12471261 0.86 AT4G24015.1
AT4G24015
RING/U-box superfamily protein
Chr4_+_16904059 0.86 AT4G35630.1
PSAT
phosphoserine aminotransferase
Chr5_-_24987811 0.86 AT5G62210.1
AT5G62210
Embryo-specific protein 3, (ATS3)
Chr4_-_17777445 0.85 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
Chr2_+_10662190 0.85 AT2G25060.1
ENODL14
early nodulin-like protein 14
Chr1_-_24395503 0.85 AT1G65610.1
KOR2
Six-hairpin glycosidases superfamily protein
Chr1_-_11548016 0.85 AT1G32100.1
PRR1
pinoresinol reductase 1
Chr3_-_197974 0.84 AT3G01500.1
CA1
carbonic anhydrase 1
Chr3_-_198160 0.84 AT3G01500.2
CA1
carbonic anhydrase 1
Chr3_-_197564 0.83 AT3G01500.4
CA1
carbonic anhydrase 1
Chr1_+_7911843 0.83 AT1G22410.1
AT1G22410
Class-II DAHP synthetase family protein
Chr5_-_4481950 0.83 AT5G13900.1
AT5G13900
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_198664 0.83 AT3G01500.3
CA1
carbonic anhydrase 1
Chr4_+_10707344 0.82 AT4G19690.2
AT4G19690.1
IRT1
iron-regulated transporter 1
Chr1_-_28823727 0.82 AT1G76790.1
IGMT5
O-methyltransferase family protein
Chr3_+_3638178 0.81 AT3G11550.1
CASP2
Uncharacterized protein family (UPF0497)
Chr1_-_654457 0.80 AT1G02900.1
RALF1
rapid alkalinization factor 1
Chr2_+_13722362 0.80 AT2G32300.2
AT2G32300.1
UCC1
uclacyanin 1
Chr4_-_15194665 0.79 AT4G31320.1
AT4G31320
SAUR-like auxin-responsive protein family
Chr4_+_700566 0.78 AT4G01630.1
EXPA17
expansin A17
Chr2_+_19686333 0.77 AT2G48140.1
AT2G48140.2
EDA4
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_13283526 0.76 AT4G26220.1
AT4G26220
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_-_1821894 0.76 AT1G06000.1
AT1G06000
UDP-Glycosyltransferase superfamily protein
Chr2_-_10454591 0.76 AT2G24600.2
AT2G24600.3
AT2G24600.4
AT2G24600.1
AT2G24600
Ankyrin repeat family protein
Chr3_+_6227341 0.76 AT3G18170.2
AT3G18170
Glycosyltransferase family 61 protein
Chr5_-_779424 0.76 AT5G03260.1
LAC11
laccase 11
Chr5_-_17962276 0.75 AT5G44568.1
AT5G44568
transmembrane protein
Chr5_-_18371021 0.75 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr3_-_20418910 0.75 AT3G55090.1
ABCG16
ABC-2 type transporter family protein
Chr3_+_4104463 0.75 AT3G12900.1
AT3G12900
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_-_20019835 0.75 AT1G53635.1
AT1G53635
hypothetical protein
Chr5_+_19481897 0.74 AT5G48070.1
XTH20
xyloglucan endotransglucosylase/hydrolase 20
Chr5_+_1563286 0.73 AT5G05270.1
AT5G05270.2
CHIL
Chalcone-flavanone isomerase family protein
Chr3_+_6228342 0.73 AT3G18170.1
AT3G18170
Glycosyltransferase family 61 protein
Chr2_+_723565 0.73 AT2G02630.1
AT2G02630
Cysteine/Histidine-rich C1 domain family protein
Chr2_-_15560755 0.72 AT2G37040.1
PAL1
PHE ammonia lyase 1
Chr4_-_17293925 0.72 AT4G36680.1
AT4G36680
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_26818949 0.72 AT5G67210.1
IRX15-L
IRREGULAR XYLEM protein (DUF579)
Chr1_+_6100964 0.72 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
Chr1_-_10139228 0.71 AT1G29050.1
TBL38
TRICHOME BIREFRINGENCE-LIKE 38
Chr2_+_10456879 0.71 AT2G24610.1
AT2G24610.2
CNGC14
cyclic nucleotide-gated channel 14
Chr4_+_13128394 0.71 AT4G25810.1
XTR6
xyloglucan endotransglycosylase 6
Chr3_-_9338075 0.71 AT3G25655.1
IDL1
inflorescence deficient in abscission (IDA)-like 1
Chr1_+_23128651 0.71 AT1G62480.1
AT1G62480
Vacuolar calcium-binding protein-like protein
Chr4_-_682601 0.71 AT4G01575.1
AT4G01575
serine protease inhibitor, Kazal-type family protein
Chr2_+_19151481 0.70 AT2G46650.1
CB5-C
cytochrome B5 isoform C
Chr5_-_2362228 0.70 AT5G07460.1
PMSR2
peptidemethionine sulfoxide reductase 2
Chr4_+_18185437 0.70 AT4G39030.1
EDS5
MATE efflux family protein
Chr5_+_6470072 0.69 AT5G19240.1
AT5G19240
Glycoprotein membrane precursor GPI-anchored
Chr1_+_17065858 0.69 AT1G45130.2
BGAL5
beta-galactosidase 5
Chr5_-_5741500 0.69 AT5G17420.1
IRX3
Cellulose synthase family protein
Chr5_-_21619281 0.68 AT5G53290.1
CRF3
cytokinin response factor 3
Chr3_+_4449259 0.68 AT3G13610.1
AT3G13610
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_-_19207608 0.68 AT2G46740.1
GulLO5
D-arabinono-1,4-lactone oxidase family protein
Chr3_-_20864594 0.68 AT3G56240.2
AT3G56240.1
AT3G56240.3
CCH
copper chaperone
Chr2_-_13386392 0.68 AT2G31390.1
AT2G31390
pfkB-like carbohydrate kinase family protein
Chr1_-_10905724 0.67 AT1G30750.1
AT1G30750
TPRXL
Chr5_+_17415698 0.67 AT5G43370.1
AT5G43370.2
PHT1%3B2
phosphate transporter 2
Chr4_-_8050157 0.67 AT4G13930.1
SHM4
serine hydroxymethyltransferase 4
Chr1_+_17065111 0.67 AT1G45130.1
BGAL5
beta-galactosidase 5
Chr5_+_1835047 0.66 AT5G06090.1
GPAT7
glycerol-3-phosphate acyltransferase 7
Chr2_+_6761635 0.66 AT2G15490.2
AT2G15490.3
AT2G15490.1
UGT73B4
UDP-glycosyltransferase 73B4
Chr3_-_21499943 0.65 AT3G58060.1
AT3G58060
Cation efflux family protein
Chr5_-_20468128 0.65 AT5G50300.1
AT5G50300.2
AZG2
Xanthine/uracil permease family protein
Chr3_-_21499676 0.65 AT3G58060.2
AT3G58060
Cation efflux family protein
Chr5_+_6290358 0.64 AT5G18860.1
AT5G18860.2
NSH3
inosine-uridine preferring nucleoside hydrolase family protein
Chr5_+_22808641 0.64 AT5G56320.2
AT5G56320.1
AT5G56320.3
EXPA14
expansin A14
Chr1_-_23257463 0.64 AT1G62800.1
AT1G62800.3
AT1G62800.2
ASP4
aspartate aminotransferase 4
Chr5_-_17157857 0.64 AT5G42785.1
AT5G42785
transmembrane protein
Chr3_+_5708826 0.64 AT3G16780.1
AT3G16780
Ribosomal protein L19e family protein
Chr2_-_6867004 0.63 AT2G15760.1
AT2G15760
calmodulin-binding protein (DUF1645)
Chr2_+_18672497 0.63 AT2G45290.1
AT2G45290.2
AT2G45290
Transketolase
Chr1_+_29549540 0.63 AT1G78570.1
RHM1
rhamnose biosynthesis 1
Chr1_+_23342211 0.63 AT1G63000.1
NRS/ER
nucleotide-rhamnose synthase/epimerase-reductase
Chr1_+_4810115 0.63 AT1G14040.1
AT1G14040
EXS (ERD1/XPR1/SYG1) family protein
Chr1_-_28727111 0.63 AT1G76550.1
AT1G76550
Phosphofructokinase family protein
Chr2_+_6313883 0.63 AT2G14750.1
APK
APS kinase
Chr1_-_9890875 0.63 AT1G28290.2
AT1G28290.1
AGP31
arabinogalactan protein 31
Chr1_+_17123785 0.62 AT1G45201.3
AT1G45201.1
AT1G45201.2
TLL1
triacylglycerol lipase-like 1
Chr3_+_415389 0.62 AT3G02230.1
RGP1
reversibly glycosylated polypeptide 1
Chr1_+_17002089 0.62 AT1G44970.1
AT1G44970
Peroxidase superfamily protein
Chr3_-_20225523 0.62 AT3G54640.1
TSA1
tryptophan synthase alpha chain
Chr5_+_568425 0.62 AT5G02540.1
AT5G02540
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_-_17161293 0.62 AT2G41170.2
AT2G41170.1
AT2G41170.3
AT2G41170
F-box family protein
Chr5_+_463073 0.61 AT5G02260.1
EXPA9
expansin A9
Chr5_+_26266180 0.61 AT5G65690.1
AT5G65690.2
AT5G65690.3
AT5G65690.4
PCK2
phosphoenolpyruvate carboxykinase 2
Chr5_-_2655732 0.61 AT5G08250.1
AT5G08250.2
AT5G08250
Cytochrome P450 superfamily protein
Chr3_-_19629204 0.61 AT3G52930.1
FBA8
Aldolase superfamily protein
Chr1_-_1122786 0.61 AT1G04220.1
KCS2
3-ketoacyl-CoA synthase 2
Chr1_+_27054030 0.61 AT1G71880.1
SUC1
sucrose-proton symporter 1
Chr2_-_12338836 0.60 AT2G28760.3
AT2G28760.1
AT2G28760.4
UXS6
UDP-XYL synthase 6
Chr5_-_6547127 0.60 AT5G19410.1
AT5G19410.2
ABCG23
ABC-2 type transporter family protein
Chr1_-_7301633 0.60 AT1G20950.1
AT1G20950
Phosphofructokinase family protein
Chr2_-_12355480 0.60 AT2G28790.1
AT2G28790.2
AT2G28790
Pathogenesis-related thaumatin superfamily protein
Chr5_-_8987898 0.60 AT5G25810.1
tny
Integrase-type DNA-binding superfamily protein
Chr2_+_1594588 0.60 AT2G04570.1
AT2G04570
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_25885261 0.59 AT1G68850.1
AT1G68850
Peroxidase superfamily protein
Chr5_-_9242854 0.59 AT5G26330.1
AT5G26330
Cupredoxin superfamily protein
Chr3_-_2376960 0.59 AT3G07420.2
AT3G07420.1
NS2
asparaginyl-tRNA synthetase 2
Chr2_+_17325846 0.58 AT2G41540.4
AT2G41540.1
AT2G41540.2
AT2G41540.3
GPDHC1
6-phosphogluconate dehydrogenase family protein
Chr2_+_6810395 0.58 AT2G15620.1
NIR1
nitrite reductase 1
Chr4_+_6836106 0.58 AT4G11211.1
AT4G11211
hypothetical protein
Chr1_-_23013477 0.58 AT1G62290.5
AT1G62290.6
AT1G62290.1
AT1G62290.3
AT1G62290.4
AT1G62290.2
AT1G62290
Saposin-like aspartyl protease family protein
Chr4_-_14776058 0.58 AT4G30190.2
HA2
H[+]-ATPase 2
Chr4_-_14776247 0.58 AT4G30190.1
HA2
H[+]-ATPase 2
Chr2_-_12955288 0.58 AT2G30395.1
OFP17
ovate family protein 17
Chr3_-_19008724 0.57 AT3G51160.1
MUR1
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_+_4517496 0.57 AT3G13760.1
AT3G13760
Cysteine/Histidine-rich C1 domain family protein
Chr1_-_6735024 0.57 AT1G19450.1
AT1G19450
Major facilitator superfamily protein
Chr2_-_18020879 0.57 AT2G43390.1
AT2G43390
hypothetical protein
Chr3_-_10590685 0.56 AT3G28340.1
GATL10
galacturonosyltransferase-like 10
Chr5_+_18905258 0.56 AT5G46590.1
AT5G46590.2
NAC096
NAC domain containing protein 96
Chr4_-_8794433 0.56 AT4G15390.1
AT4G15390.2
AT4G15390
HXXXD-type acyl-transferase family protein
Chr4_-_15022445 0.56 AT4G30850.2
AT4G30850.1
HHP2
heptahelical transmembrane protein2
Chr1_-_28915102 0.56 AT1G76952.1
IDL5
inflorescence deficient in abscission (IDA)-like 5
Chr2_-_14740146 0.56 AT2G34930.1
AT2G34930
disease resistance family protein / LRR family protein
Chr5_-_1139631 0.56 AT5G04150.2
AT5G04150.1
BHLH101
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_-_4344792 0.56 AT5G13520.1
AT5G13520
peptidase M1 family protein
Chr1_-_7294746 0.56 AT1G20930.1
CDKB2%3B2
cyclin-dependent kinase B2;2
Chr1_+_16155278 0.55 AT1G43020.1
AT1G43020.3
AT1G43020.4
AT1G43020.5
AT1G43020.2
AT1G43020
electron protein, putative (Protein of unknown function, DUF547)
Chr2_-_18463533 0.55 AT2G44790.1
UCC2
uclacyanin 2
Chr5_-_3300151 0.55 AT5G10480.2
AT5G10480.3
AT5G10480.1
PAS2
Protein-tyrosine phosphatase-like, PTPLA
Chr5_-_22822904 0.55 AT5G56350.1
AT5G56350
Pyruvate kinase family protein
Chr5_+_19281374 0.55 AT5G47530.1
AT5G47530
Auxin-responsive family protein
Chr2_-_8329944 0.55 AT2G19190.1
FRK1
FLG22-induced receptor-like kinase 1
Chr3_+_20196329 0.55 AT3G54560.2
HTA11
histone H2A 11
Chr5_+_26447642 0.55 AT5G66170.3
AT5G66170.2
AT5G66170.1
STR18
sulfurtransferase 18
Chr2_+_16840081 0.55 AT2G40320.1
TBL33
TRICHOME BIREFRINGENCE-LIKE 33
Chr4_+_596397 0.54 AT4G01440.3
AT4G01440.2
AT4G01440.1
AT4G01440.4
UMAMIT31
nodulin MtN21 /EamA-like transporter family protein
Chr1_-_29897166 0.54 AT1G79470.1
AT1G79470
Aldolase-type TIM barrel family protein
Chr2_+_7697311 0.54 AT2G17720.1
P4H5
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_-_19385869 0.54 AT5G47870.1
RAD52-2
cobalt ion-binding protein
Chr2_+_10024150 0.54 AT2G23540.1
AT2G23540
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_7922276 0.54 AT1G22440.1
AT1G22440
Zinc-binding alcohol dehydrogenase family protein
Chr1_-_10553295 0.54 AT1G30080.1
AT1G30080.2
AT1G30080
Glycosyl hydrolase superfamily protein
Chr3_+_20780175 0.54 AT3G55990.1
ESK1
trichome birefringence-like protein (DUF828)
Chr5_+_3206140 0.53 AT5G10210.1
AT5G10210
nitric oxide synthase-interacting protein
Chr3_+_2465235 0.53 AT3G07720.1
AT3G07720
Galactose oxidase/kelch repeat superfamily protein
Chr3_+_10520443 0.53 AT3G28210.1
AT3G28210.2
PMZ
zinc finger (AN1-like) family protein
Chr4_+_16310768 0.53 AT4G34050.1
AT4G34050.2
CCoAOMT1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_-_20268871 0.53 AT3G54750.1
AT3G54750.5
AT3G54750.4
AT3G54750.3
AT3G54750.2
AT3G54750
downstream neighbor of Son
Chr4_-_810574 0.53 AT4G01870.1
AT4G01870.2
AT4G01870
tolB protein-like protein
Chr1_+_3053698 0.53 AT1G09460.1
AT1G09460
Carbohydrate-binding X8 domain superfamily protein
Chr1_+_3363432 0.53 AT1G10270.1
GRP23
glutamine-rich protein 23
Chr4_+_14796695 0.53 AT4G30210.3
AT4G30210.2
AT4G30210.1
ATR2
P450 reductase 2
Chr2_+_7275657 0.53 AT2G16760.1
AT2G16760
Calcium-dependent phosphotriesterase superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G16490

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.1 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.5 1.4 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.4 2.1 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.4 2.0 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.4 1.9 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.4 1.1 GO:0071281 cellular response to iron ion(GO:0071281)
0.4 1.1 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.4 1.4 GO:0042144 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144)
0.4 1.1 GO:0015840 urea transport(GO:0015840)
0.3 0.6 GO:0042539 hypotonic salinity response(GO:0042539)
0.3 1.3 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.3 0.9 GO:0002082 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.3 1.1 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.3 0.8 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.3 1.3 GO:0007043 cell-cell junction assembly(GO:0007043)
0.3 1.8 GO:0046085 adenosine metabolic process(GO:0046085)
0.3 3.3 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.2 1.5 GO:0006471 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.2 6.4 GO:0010345 suberin biosynthetic process(GO:0010345)
0.2 0.9 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.2 0.9 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 0.8 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.2 1.0 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.2 0.8 GO:0015675 nickel cation transport(GO:0015675)
0.2 2.2 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.2 0.8 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.2 0.9 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.2 0.9 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.2 0.9 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.2 0.8 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.2 0.5 GO:0070207 protein homotrimerization(GO:0070207)
0.2 0.9 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.9 GO:0072530 purine-containing compound transmembrane transport(GO:0072530)
0.1 0.9 GO:0043447 alkane biosynthetic process(GO:0043447)
0.1 0.4 GO:0071258 cellular response to gravity(GO:0071258)
0.1 0.4 GO:0000730 DNA recombinase assembly(GO:0000730) strand invasion(GO:0042148)
0.1 0.4 GO:0033259 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.1 0.4 GO:0019632 shikimate metabolic process(GO:0019632)
0.1 0.4 GO:0045002 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.1 0.7 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.1 0.4 GO:1903793 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) cellular response to absence of light(GO:0071485) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.1 0.4 GO:0006425 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.1 0.7 GO:0046500 S-adenosylmethionine metabolic process(GO:0046500)
0.1 0.4 GO:0070150 mitochondrial glycyl-tRNA aminoacylation(GO:0070150)
0.1 1.1 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 0.4 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.1 0.6 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.1 0.5 GO:0015744 succinate transport(GO:0015744)
0.1 0.6 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.1 0.5 GO:0031336 negative regulation of ethylene biosynthetic process(GO:0010366) negative regulation of sulfur amino acid metabolic process(GO:0031336) negative regulation of cellular amine metabolic process(GO:0033239) negative regulation of cellular amino acid metabolic process(GO:0045763) negative regulation of sulfur metabolic process(GO:0051175) negative regulation of olefin metabolic process(GO:1900909) negative regulation of olefin biosynthetic process(GO:1900912)
0.1 0.5 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1 0.3 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.1 0.3 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.1 0.3 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.1 0.9 GO:1902299 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 0.4 GO:0045332 phospholipid translocation(GO:0045332)
0.1 0.6 GO:0046345 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.3 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.1 0.7 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.1 0.3 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
0.1 0.9 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.1 0.9 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 0.8 GO:0006183 GTP biosynthetic process(GO:0006183)
0.1 0.5 GO:0045793 positive regulation of cell size(GO:0045793)
0.1 0.3 GO:0031538 negative regulation of anthocyanin metabolic process(GO:0031538)
0.1 0.5 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.1 0.3 GO:1903890 atrichoblast differentiation(GO:0010055) positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.1 1.8 GO:0046688 response to copper ion(GO:0046688)
0.1 0.6 GO:0006565 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.1 1.1 GO:0044030 regulation of DNA methylation(GO:0044030)
0.1 0.4 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.4 GO:0019079 viral genome replication(GO:0019079)
0.1 0.8 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 0.3 GO:0010185 regulation of cellular defense response(GO:0010185)
0.1 1.1 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 1.1 GO:0052544 defense response by callose deposition in cell wall(GO:0052544)
0.1 0.7 GO:0006047 UDP-N-acetylglucosamine metabolic process(GO:0006047) amino sugar biosynthetic process(GO:0046349)
0.1 0.6 GO:0044209 AMP salvage(GO:0044209)
0.1 0.6 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.5 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.5 GO:0006000 fructose metabolic process(GO:0006000)
0.1 0.4 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 0.5 GO:0015689 molybdate ion transport(GO:0015689)
0.1 1.3 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.1 0.1 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.1 1.0 GO:0015865 purine nucleotide transport(GO:0015865)
0.1 0.2 GO:0032025 response to cobalt ion(GO:0032025)
0.1 0.2 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 0.2 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.1 0.2 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.1 0.7 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 0.5 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.1 0.3 GO:0010338 leaf formation(GO:0010338)
0.1 0.6 GO:0042128 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.1 0.9 GO:0030497 fatty acid elongation(GO:0030497)
0.1 0.1 GO:0008153 para-aminobenzoic acid biosynthetic process(GO:0008153)
0.1 0.3 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.1 0.3 GO:0006264 mitochondrial DNA replication(GO:0006264)
0.1 0.2 GO:0051289 protein homotetramerization(GO:0051289)
0.1 0.4 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 0.2 GO:0000492 box C/D snoRNP assembly(GO:0000492) regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.1 1.0 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.1 0.3 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 0.2 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 0.2 GO:0006409 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 0.2 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.1 1.6 GO:0042335 cuticle development(GO:0042335)
0.1 0.8 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.1 0.2 GO:0046417 chorismate metabolic process(GO:0046417)
0.1 0.3 GO:0015824 proline transport(GO:0015824)
0.1 0.5 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.1 1.1 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.1 0.5 GO:0010088 phloem development(GO:0010088)
0.1 0.2 GO:1990428 miRNA transport(GO:1990428)
0.1 0.2 GO:0010483 pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.1 1.0 GO:0006085 acetyl-CoA biosynthetic process(GO:0006085)
0.1 0.8 GO:0015770 sucrose transport(GO:0015770)
0.1 1.4 GO:0010227 floral organ abscission(GO:0010227)
0.1 0.7 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.1 0.2 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.1 0.2 GO:0006097 glyoxylate cycle(GO:0006097)
0.0 0.3 GO:0043090 amino acid import(GO:0043090)
0.0 0.6 GO:0060260 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.0 0.1 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.0 0.3 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 1.3 GO:0006094 gluconeogenesis(GO:0006094)
0.0 2.0 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.1 GO:0010071 root meristem specification(GO:0010071)
0.0 0.3 GO:1900458 negative regulation of brassinosteroid mediated signaling pathway(GO:1900458)
0.0 0.1 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.0 0.3 GO:0006567 threonine catabolic process(GO:0006567)
0.0 0.4 GO:0031222 arabinan catabolic process(GO:0031222)
0.0 1.0 GO:0019852 L-ascorbic acid metabolic process(GO:0019852) L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.9 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.0 0.5 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.0 0.8 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.4 GO:1990937 xylan acetylation(GO:1990937)
0.0 0.7 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.0 0.1 GO:1902534 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.0 0.2 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.0 0.2 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.0 0.2 GO:0010148 transpiration(GO:0010148) glucose mediated signaling pathway(GO:0010255)
0.0 1.1 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.2 GO:1900908 regulation of ethylene biosynthetic process(GO:0010364) regulation of sulfur amino acid metabolic process(GO:0031335) regulation of olefin metabolic process(GO:1900908) regulation of olefin biosynthetic process(GO:1900911)
0.0 0.5 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.3 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.1 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.0 0.5 GO:0018401 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.2 GO:0090202 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.0 0.3 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.0 0.1 GO:0071242 cellular response to ammonium ion(GO:0071242)
0.0 0.4 GO:0045842 positive regulation of mitotic nuclear division(GO:0045840) positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.0 0.4 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.0 0.4 GO:0010037 response to carbon dioxide(GO:0010037)
0.0 0.1 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.0 0.1 GO:0006729 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.0 0.6 GO:0051307 meiotic chromosome separation(GO:0051307)
0.0 0.1 GO:0071763 nuclear membrane organization(GO:0071763)
0.0 0.2 GO:0097502 mannosylation(GO:0097502)
0.0 0.1 GO:1904031 positive regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045737) positive regulation of cyclin-dependent protein kinase activity(GO:1904031)
0.0 0.2 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.0 0.4 GO:0080086 stamen filament development(GO:0080086)
0.0 0.1 GO:0009945 radial axis specification(GO:0009945)
0.0 0.1 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.0 0.8 GO:0009269 response to desiccation(GO:0009269)
0.0 2.7 GO:0009698 phenylpropanoid metabolic process(GO:0009698)
0.0 0.4 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.1 GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) histone arginine methylation(GO:0034969) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.0 0.4 GO:1902074 response to salt(GO:1902074)
0.0 0.1 GO:0035435 phosphate ion transmembrane transport(GO:0035435)
0.0 0.1 GO:0090435 protein localization to nuclear envelope(GO:0090435)
0.0 0.3 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.0 0.6 GO:0051781 positive regulation of cell division(GO:0051781)
0.0 0.2 GO:0006546 glycine catabolic process(GO:0006546)
0.0 0.2 GO:0010587 miRNA catabolic process(GO:0010587)
0.0 0.4 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.2 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.0 0.1 GO:0000719 photoreactive repair(GO:0000719)
0.0 0.1 GO:0009270 response to humidity(GO:0009270) response to low humidity(GO:0090547)
0.0 0.7 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 0.1 GO:0099636 cytoplasmic streaming(GO:0099636)
0.0 0.4 GO:0010555 response to mannitol(GO:0010555)
0.0 0.7 GO:0030091 protein repair(GO:0030091)
0.0 1.5 GO:0030244 cellulose biosynthetic process(GO:0030244)
0.0 0.1 GO:0015074 DNA integration(GO:0015074)
0.0 0.8 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.3 GO:0030042 actin filament depolymerization(GO:0030042)
0.0 1.0 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.4 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.1 GO:0009304 tRNA transcription(GO:0009304)
0.0 1.3 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.2 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.0 0.2 GO:0034052 positive regulation of plant-type hypersensitive response(GO:0034052)
0.0 0.2 GO:0009819 drought recovery(GO:0009819)
0.0 0.4 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 1.1 GO:0019395 fatty acid oxidation(GO:0019395)
0.0 0.5 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.7 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.2 GO:1901879 regulation of protein depolymerization(GO:1901879)
0.0 0.1 GO:0080009 mRNA methylation(GO:0080009)
0.0 0.2 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.0 0.7 GO:0060548 negative regulation of cell death(GO:0060548)
0.0 1.5 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 0.3 GO:0032365 intracellular lipid transport(GO:0032365)
0.0 0.2 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.1 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.0 0.2 GO:0034440 lipid oxidation(GO:0034440)
0.0 0.2 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.0 0.2 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.0 0.1 GO:0070370 cellular heat acclimation(GO:0070370)
0.0 0.1 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 0.3 GO:0045927 positive regulation of growth(GO:0045927)
0.0 0.2 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.0 0.3 GO:0000266 mitochondrial fission(GO:0000266)
0.0 0.3 GO:0061572 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.3 GO:0006862 nucleotide transport(GO:0006862)
0.0 0.4 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.1 GO:0016574 histone ubiquitination(GO:0016574)
0.0 0.2 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.1 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.0 0.0 GO:0044154 histone H3-K14 acetylation(GO:0044154)
0.0 1.0 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.7 GO:0048825 cotyledon development(GO:0048825)
0.0 0.5 GO:0009625 response to insect(GO:0009625)
0.0 0.1 GO:0071323 cellular response to chitin(GO:0071323)
0.0 0.5 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.6 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.0 0.2 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 1.2 GO:0009561 megagametogenesis(GO:0009561)
0.0 0.3 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.0 0.3 GO:0009395 phospholipid catabolic process(GO:0009395)
0.0 0.2 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.2 GO:0070298 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.1 GO:0010351 lithium ion transport(GO:0010351)
0.0 0.1 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.0 0.1 GO:0071031 nuclear mRNA surveillance of mRNA 3'-end processing(GO:0071031) CUT catabolic process(GO:0071034) CUT metabolic process(GO:0071043) nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription(GO:0071049)
0.0 0.3 GO:0043067 regulation of programmed cell death(GO:0043067)
0.0 0.6 GO:0006414 translational elongation(GO:0006414)
0.0 0.1 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.0 0.1 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.0 0.5 GO:0006099 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.4 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.1 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.0 0.3 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.0 0.4 GO:0019761 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.0 0.2 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.0 0.2 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 0.4 GO:0010089 xylem development(GO:0010089)
0.0 0.1 GO:0051262 protein tetramerization(GO:0051262)
0.0 0.2 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.4 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.2 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.2 GO:0090333 regulation of stomatal closure(GO:0090333)
0.0 0.3 GO:0006614 cotranslational protein targeting to membrane(GO:0006613) SRP-dependent cotranslational protein targeting to membrane(GO:0006614)
0.0 0.2 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.0 0.1 GO:0009089 lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 0.1 GO:0010044 response to aluminum ion(GO:0010044)
0.0 0.2 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.0 0.3 GO:0010252 auxin homeostasis(GO:0010252)
0.0 0.2 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.1 GO:0000038 very long-chain fatty acid metabolic process(GO:0000038)
0.0 0.1 GO:0048766 root hair initiation(GO:0048766)
0.0 0.1 GO:0010192 mucilage biosynthetic process(GO:0010192) mucilage metabolic process involved in seed coat development(GO:0048359)
0.0 0.2 GO:0030490 maturation of SSU-rRNA(GO:0030490)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.1 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.5 1.4 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.3 1.2 GO:0010330 cellulose synthase complex(GO:0010330)
0.2 2.3 GO:0048226 Casparian strip(GO:0048226)
0.2 1.0 GO:0009897 external side of plasma membrane(GO:0009897)
0.2 0.9 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.2 1.1 GO:0009346 citrate lyase complex(GO:0009346)
0.2 0.5 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.1 0.4 GO:0005960 glycine cleavage complex(GO:0005960)
0.1 0.9 GO:0042555 MCM complex(GO:0042555)
0.1 0.2 GO:0035371 microtubule plus-end(GO:0035371) microtubule end(GO:1990752)
0.1 0.2 GO:0044462 cell wall part(GO:0044426) external encapsulating structure part(GO:0044462)
0.1 0.3 GO:0042721 mitochondrial inner membrane protein insertion complex(GO:0042721)
0.1 0.3 GO:0031429 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1 0.3 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.1 0.6 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.1 2.6 GO:0010319 stromule(GO:0010319)
0.1 0.2 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 0.7 GO:0045298 tubulin complex(GO:0045298)
0.0 7.9 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.5 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.1 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.2 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.7 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 0.1 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.0 6.9 GO:0009505 plant-type cell wall(GO:0009505)
0.0 9.3 GO:0048046 apoplast(GO:0048046)
0.0 0.2 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.4 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.3 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 0.2 GO:0031298 replication fork protection complex(GO:0031298)
0.0 0.1 GO:0000938 GARP complex(GO:0000938)
0.0 0.3 GO:0071007 U2-type catalytic step 2 spliceosome(GO:0071007)
0.0 1.3 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 6.7 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.9 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.2 GO:0030897 HOPS complex(GO:0030897)
0.0 0.1 GO:0005845 mRNA cap binding complex(GO:0005845)
0.0 0.3 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 0.1 GO:0000836 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.0 0.1 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 0.8 GO:0005764 lysosome(GO:0005764)
0.0 2.7 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.6 GO:1903293 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 0.3 GO:0000794 condensed nuclear chromosome(GO:0000794)
0.0 1.2 GO:0005615 extracellular space(GO:0005615)
0.0 4.6 GO:0022626 cytosolic ribosome(GO:0022626)
0.0 0.1 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0 0.1 GO:0005769 early endosome(GO:0005769)
0.0 1.6 GO:0042995 cell projection(GO:0042995)
0.0 0.6 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 0.7 GO:0009504 cell plate(GO:0009504)
0.0 0.4 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.0 0.1 GO:0005828 kinetochore microtubule(GO:0005828)
0.0 3.4 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.1 GO:0055037 recycling endosome(GO:0055037)
0.0 0.4 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 0.5 GO:0000775 chromosome, centromeric region(GO:0000775)
0.0 0.3 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.1 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.2 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.4 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 1.1 GO:0005635 nuclear envelope(GO:0005635)
0.0 0.1 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.0 0.0 GO:0035101 FACT complex(GO:0035101)
0.0 0.1 GO:0045257 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.0 0.2 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 9.3 GO:0005794 Golgi apparatus(GO:0005794)
0.0 0.1 GO:0005884 actin filament(GO:0005884)
0.0 0.5 GO:0032040 small-subunit processome(GO:0032040)
0.0 0.3 GO:0005838 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.0 0.2 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.0 GO:0042788 polysomal ribosome(GO:0042788)
0.0 0.1 GO:0035861 site of double-strand break(GO:0035861)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.1 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.7 2.0 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.5 2.1 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.5 2.6 GO:0042085 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.5 1.4 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.4 1.6 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.4 1.5 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.4 1.1 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.4 1.1 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.3 1.0 GO:0045430 chalcone isomerase activity(GO:0045430)
0.3 1.3 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
0.3 1.6 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.3 1.2 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.3 0.9 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.3 0.9 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.3 1.4 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.3 0.9 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.3 0.8 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.3 0.8 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.3 0.6 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.3 1.1 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.3 1.1 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.2 1.2 GO:0004001 adenosine kinase activity(GO:0004001)
0.2 0.9 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.2 1.3 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.2 0.9 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.2 0.6 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.2 0.6 GO:0033984 indole-3-glycerol-phosphate lyase activity(GO:0033984)
0.2 0.6 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.2 1.1 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.2 0.7 GO:0004834 tryptophan synthase activity(GO:0004834)
0.2 3.6 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.2 0.6 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.2 0.5 GO:0004776 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.2 0.6 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.2 0.8 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 1.2 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.1 4.7 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.1 0.8 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 0.7 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.1 1.1 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 1.0 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.1 0.3 GO:0016841 ammonia-lyase activity(GO:0016841)
0.1 0.4 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.1 0.8 GO:0042879 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.1 0.4 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.1 1.0 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.1 0.8 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.4 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.1 1.3 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.1 0.6 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.1 0.4 GO:0003856 3-dehydroquinate synthase activity(GO:0003856)
0.1 0.5 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.1 0.3 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.1 0.6 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.1 1.2 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 0.8 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.1 0.3 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.1 0.7 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 0.5 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.1 0.3 GO:0016418 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.1 0.7 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.1 0.3 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.1 0.3 GO:0050997 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.1 0.4 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.1 0.5 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.9 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.1 0.6 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.5 GO:0016531 copper chaperone activity(GO:0016531)
0.1 0.4 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 0.6 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.1 0.8 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 0.3 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.1 0.4 GO:0000150 recombinase activity(GO:0000150)
0.1 0.8 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.9 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 0.4 GO:0004758 serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.1 0.6 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.6 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.1 0.9 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 0.4 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.2 GO:0051010 microtubule plus-end binding(GO:0051010)
0.1 0.9 GO:0047893 flavonol 3-O-glucosyltransferase activity(GO:0047893)
0.1 0.8 GO:0008865 fructokinase activity(GO:0008865)
0.1 0.5 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.1 0.4 GO:0004072 aspartate kinase activity(GO:0004072)
0.1 0.7 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.1 0.7 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.1 0.6 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.1 0.2 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.1 1.1 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.2 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.1 0.2 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.1 0.2 GO:0010331 gibberellin binding(GO:0010331)
0.1 0.4 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.3 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.1 0.3 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.1 0.8 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 1.0 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.1 0.2 GO:0008169 C-methyltransferase activity(GO:0008169)
0.1 0.5 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.1 0.4 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.1 0.6 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 0.4 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
0.1 0.4 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.1 0.2 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.1 0.3 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 0.3 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 0.3 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 1.8 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.1 0.3 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.1 0.2 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.1 0.2 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 0.2 GO:0008934 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.1 0.2 GO:0005402 sugar:proton symporter activity(GO:0005351) cation:sugar symporter activity(GO:0005402)
0.1 0.3 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.1 0.2 GO:0071771 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.1 1.4 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.3 GO:0004766 spermidine synthase activity(GO:0004766)
0.1 0.3 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.1 0.7 GO:0002020 protease binding(GO:0002020)
0.1 0.2 GO:0015245 fatty acid transporter activity(GO:0015245)
0.1 0.5 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 0.6 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.0 0.3 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.4 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 6.5 GO:0009055 electron carrier activity(GO:0009055)
0.0 1.2 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.5 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.0 0.3 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.0 0.2 GO:0008493 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 0.6 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 1.1 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.2 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.0 0.6 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.6 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.5 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.3 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.0 0.1 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.0 1.1 GO:0008810 cellulase activity(GO:0008810)
0.0 0.8 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.7 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 1.4 GO:0016836 hydro-lyase activity(GO:0016836)
0.0 0.5 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.5 GO:0004656 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0 0.2 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.0 0.3 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.2 GO:0051740 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 0.1 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.0 0.1 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 1.0 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.1 GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575)
0.0 0.3 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.1 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.4 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 0.3 GO:0008083 growth factor activity(GO:0008083)
0.0 0.4 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.3 GO:0030623 U5 snRNA binding(GO:0030623)
0.0 0.5 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.0 1.2 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.1 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.0 0.4 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.3 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 0.3 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 0.2 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.5 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.1 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.0 1.7 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.3 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.1 GO:0003785 actin monomer binding(GO:0003785)
0.0 1.2 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.3 GO:0016872 intramolecular lyase activity(GO:0016872)
0.0 0.4 GO:0015662 ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism(GO:0015662)
0.0 0.1 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 0.5 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.1 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.0 0.1 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.0 0.6 GO:0010427 abscisic acid binding(GO:0010427)
0.0 0.1 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.0 0.1 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 0.1 GO:0003933 GTP cyclohydrolase activity(GO:0003933)
0.0 0.1 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.0 0.2 GO:0008235 metalloexopeptidase activity(GO:0008235)
0.0 0.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.1 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.0 0.1 GO:0004839 ubiquitin activating enzyme activity(GO:0004839)
0.0 0.7 GO:0005179 hormone activity(GO:0005179)
0.0 0.3 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.1 GO:0036080 GDP-fucose transmembrane transporter activity(GO:0005457) purine nucleotide-sugar transmembrane transporter activity(GO:0036080)
0.0 0.1 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.0 0.2 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.4 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.0 0.7 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.1 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.9 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.3 GO:0016289 CoA hydrolase activity(GO:0016289)
0.0 0.3 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 1.6 GO:0051020 GTPase binding(GO:0051020)
0.0 0.2 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.0 0.3 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.0 0.2 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 0.1 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.1 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.4 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.5 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 1.7 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.4 GO:0019902 phosphatase binding(GO:0019902)
0.0 0.1 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.0 0.2 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.4 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.4 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 2.3 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 0.1 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.2 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.0 0.4 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.0 0.1 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.0 0.2 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.3 GO:0070122 isopeptidase activity(GO:0070122)
0.0 1.0 GO:0043621 protein self-association(GO:0043621)
0.0 0.2 GO:0044620 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process(GO:0000036) ACP phosphopantetheine attachment site binding(GO:0044620) prosthetic group binding(GO:0051192)
0.0 0.2 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.2 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.1 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.0 0.1 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.3 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.0 GO:0070008 serine-type exopeptidase activity(GO:0070008)
0.0 0.1 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.4 GO:0000049 tRNA binding(GO:0000049)
0.0 0.1 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.0 1.4 GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0016616)
0.0 0.3 GO:0032934 sterol binding(GO:0032934)
0.0 0.4 GO:0022843 voltage-gated cation channel activity(GO:0022843)
0.0 0.0 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.0 0.1 GO:0008199 ferric iron binding(GO:0008199)
0.0 1.2 GO:0042626 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances(GO:0016820) ATPase activity, coupled to transmembrane movement of substances(GO:0042626) ATPase activity, coupled to movement of substances(GO:0043492)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 3.2 PID CMYB PATHWAY C-MYB transcription factor network
0.4 1.5 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.3 1.9 PID P73PATHWAY p73 transcription factor network
0.2 0.6 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.1 0.9 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.5 PID AJDISS 2PATHWAY Posttranslational regulation of adherens junction stability and dissassembly
0.1 0.2 PID RAS PATHWAY Regulation of Ras family activation
0.1 0.2 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.0 0.1 SIG CHEMOTAXIS Genes related to chemotaxis
0.0 0.2 PID ATM PATHWAY ATM pathway
0.0 0.2 PID PLK1 PATHWAY PLK1 signaling events
0.0 0.2 PID TELOMERASE PATHWAY Regulation of Telomerase
0.0 0.2 PID PTP1B PATHWAY Signaling events mediated by PTP1B
0.0 0.0 PID IGF1 PATHWAY IGF1 pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 3.3 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.4 1.6 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.3 0.8 REACTOME NUCLEOTIDE BINDING DOMAIN LEUCINE RICH REPEAT CONTAINING RECEPTOR NLR SIGNALING PATHWAYS Genes involved in Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways
0.2 0.9 REACTOME PROLACTIN RECEPTOR SIGNALING Genes involved in Prolactin receptor signaling
0.1 0.3 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.1 0.4 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.0 0.1 REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT Genes involved in Transport of Mature mRNA Derived from an Intronless Transcript
0.0 0.2 REACTOME DEVELOPMENTAL BIOLOGY Genes involved in Developmental Biology
0.0 0.1 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.0 0.1 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination