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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G09540

Z-value: 1.30

Transcription factors associated with AT1G09540

Gene Symbol Gene ID Gene Info
AT1G09540
AT1G09540 myb domain protein 61

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB61arTal_v1_Chr1_+_3086101_3086101-0.029.3e-01Click!

Activity profile of AT1G09540 motif

Sorted Z-values of AT1G09540 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_6826587 2.73 AT4G11190.1
AT4G11190
Disease resistance-responsive (dirigent-like protein) family protein
Chr4_+_2449434 2.63 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
Chr5_-_19040456 2.17 AT5G46900.1
AT5G46900
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_-_7421828 2.10 AT4G12520.1
AT4G12520
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_29130375 2.01 AT1G77520.1
AT1G77520
O-methyltransferase family protein
Chr3_-_1758807 1.94 AT3G05890.1
RCI2B
Low temperature and salt responsive protein family
Chr3_+_16770888 1.79 AT3G45680.1
AT3G45680
Major facilitator superfamily protein
Chr5_+_4488476 1.68 AT5G13930.1
TT4
Chalcone and stilbene synthase family protein
Chr4_+_7434199 1.64 AT4G12545.1
AT4G12545
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_20354351 1.59 AT3G54940.3
AT3G54940.2
AT3G54940
Papain family cysteine protease
Chr2_-_9538963 1.56 AT2G22470.1
AGP2
arabinogalactan protein 2
Chr4_+_17852441 1.53 AT4G37980.2
AT4G37980.1
ELI3-1
cinnamyl alcohol dehydrogenase 7
Chr3_-_17008528 1.45 AT3G46280.1
AT3G46280
kinase-like protein
Chr2_+_15445294 1.42 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr4_-_12886695 1.36 AT4G25100.1
AT4G25100.3
AT4G25100.4
FSD1
Fe superoxide dismutase 1
Chr3_+_957112 1.36 AT3G03780.1
AT3G03780.3
MS2
methionine synthase 2
Chr1_-_22589789 1.32 AT1G61255.1
AT1G61255
hypothetical protein
Chr3_+_956862 1.31 AT3G03780.2
MS2
methionine synthase 2
Chr1_+_23128651 1.29 AT1G62480.1
AT1G62480
Vacuolar calcium-binding protein-like protein
Chr3_-_21293158 1.28 AT3G57520.2
AT3G57520.3
AT3G57520.1
SIP2
seed imbibition 2
Chr5_-_16236 1.28 AT5G01040.1
LAC8
laccase 8
Chr2_-_12889931 1.28 AT2G30210.1
LAC3
laccase 3
Chr2_+_13722362 1.28 AT2G32300.2
AT2G32300.1
UCC1
uclacyanin 1
Chr1_+_17123785 1.28 AT1G45201.3
AT1G45201.1
AT1G45201.2
TLL1
triacylglycerol lipase-like 1
Chr5_+_26447642 1.26 AT5G66170.3
AT5G66170.2
AT5G66170.1
STR18
sulfurtransferase 18
Chr4_-_12339967 1.26 AT4G23690.1
DIR6
Disease resistance-responsive (dirigent-like protein) family protein
Chr1_-_16838562 1.25 AT1G44350.1
ILL6
IAA-amino acid hydrolase ILR1-like 6
Chr3_+_21261046 1.22 AT3G57450.1
AT3G57450
hypothetical protein
Chr4_-_18581696 1.22 AT4G40090.1
AGP3
arabinogalactan protein 3
Chr2_-_16780368 1.21 AT2G40170.1
GEA6
Stress induced protein
Chr3_+_5692607 1.19 AT3G16720.1
ATL2
TOXICOS EN LEVADURA 2
Chr3_+_23182722 1.18 AT3G62680.1
PRP3
proline-rich protein 3
Chr1_+_23331563 1.18 AT1G62980.1
EXPA18
expansin A18
Chr1_+_27188036 1.18 AT1G72230.1
AT1G72230
Cupredoxin superfamily protein
Chr3_-_20418910 1.16 AT3G55090.1
ABCG16
ABC-2 type transporter family protein
Chr1_-_20648891 1.16 AT1G55330.1
AGP21
arabinogalactan protein 21
Chr1_+_27521944 1.15 AT1G73190.1
TIP3%3B1
Aquaporin-like superfamily protein
Chr3_-_16448844 1.15 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
Chr1_+_7911843 1.14 AT1G22410.1
AT1G22410
Class-II DAHP synthetase family protein
Chr4_+_11155453 1.13 AT4G20830.1
AT4G20830.2
AT4G20830
FAD-binding Berberine family protein
Chr5_-_24987811 1.13 AT5G62210.1
AT5G62210
Embryo-specific protein 3, (ATS3)
Chr4_-_12886902 1.11 AT4G25100.2
AT4G25100.5
FSD1
Fe superoxide dismutase 1
Chr3_-_9338075 1.10 AT3G25655.1
IDL1
inflorescence deficient in abscission (IDA)-like 1
Chr1_-_4526204 1.08 AT1G13245.1
RTFL17
ROTUNDIFOLIA like 17
Chr1_+_2927502 1.08 AT1G09070.1
SRC2
soybean gene regulated by cold-2
Chr2_+_6313883 1.06 AT2G14750.1
APK
APS kinase
Chr3_-_17441431 1.06 AT3G47340.1
ASN1
glutamine-dependent asparagine synthase 1
Chr3_+_9480746 1.05 AT3G25900.1
AT3G25900.3
AT3G25900.2
HMT-1
Homocysteine S-methyltransferase family protein
Chr3_-_17441242 1.05 AT3G47340.3
AT3G47340.2
ASN1
glutamine-dependent asparagine synthase 1
Chr4_-_16703486 1.02 AT4G35090.3
AT4G35090.1
CAT2
catalase 2
Chr1_+_24442388 1.02 AT1G65730.1
YSL7
YELLOW STRIPE like 7
Chr4_-_16703286 1.01 AT4G35090.2
CAT2
catalase 2
Chr5_+_5038563 1.00 AT5G15530.1
BCCP2
biotin carboxyl carrier protein 2
Chr4_-_18275017 1.00 AT4G39260.4
AT4G39260.3
AT4G39260.2
AT4G39260.1
CCR1
cold, circadian rhythm, and RNA binding 1
Chr4_-_14542565 0.99 AT4G29690.1
AT4G29690
Alkaline-phosphatase-like family protein
Chr5_-_17962276 0.98 AT5G44568.1
AT5G44568
transmembrane protein
Chr3_-_17440176 0.97 AT3G47340.4
ASN1
glutamine-dependent asparagine synthase 1
Chr3_+_16271511 0.97 AT3G44720.1
ADT4
arogenate dehydratase 4
Chr5_-_442187 0.96 AT5G02220.1
AT5G02220
cyclin-dependent kinase inhibitor
Chr5_+_26421610 0.94 AT5G66070.1
AT5G66070.3
AT5G66070.4
AT5G66070.2
AT5G66070.5
AT5G66070
RING/U-box superfamily protein
Chr4_-_9680389 0.94 AT4G17280.1
AT4G17280
Auxin-responsive family protein
Chr2_+_19151481 0.91 AT2G46650.1
CB5-C
cytochrome B5 isoform C
Chr5_-_4481950 0.91 AT5G13900.1
AT5G13900
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_7040231 0.91 AT1G20330.1
SMT2
sterol methyltransferase 2
Chr1_-_6241510 0.90 AT1G18140.1
LAC1
laccase 1
Chr1_-_1821894 0.89 AT1G06000.1
AT1G06000
UDP-Glycosyltransferase superfamily protein
Chr2_+_16049918 0.89 AT2G38310.1
PYL4
PYR1-like 4
Chr2_+_3618058 0.88 AT2G08986.1
AT2G08986
hypothetical protein
Chr5_+_26910205 0.88 AT5G67430.2
AT5G67430.1
AT5G67430
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr2_+_19437648 0.88 AT2G47360.1
AT2G47360
transmembrane protein
Chr4_+_14762819 0.85 AT4G30170.1
AT4G30170
Peroxidase family protein
Chr4_+_5740219 0.85 AT4G08950.1
EXO
Phosphate-responsive 1 family protein
Chr5_-_19385869 0.84 AT5G47870.1
RAD52-2
cobalt ion-binding protein
Chr5_-_6409666 0.83 AT5G19100.1
AT5G19100
Eukaryotic aspartyl protease family protein
Chr1_+_5602786 0.82 AT1G16390.1
OCT3
organic cation/carnitine transporter 3
Chr5_-_9792378 0.81 AT5G27660.2
DEG14
Trypsin family protein with PDZ domain-containing protein
Chr5_+_5935038 0.81 AT5G17920.1
AT5G17920.2
ATMS1
Cobalamin-independent synthase family protein
Chr4_-_17777445 0.81 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
Chr2_+_11037303 0.80 AT2G25890.2
AT2G25890.1
AT2G25890
Oleosin family protein
Chr4_-_12006209 0.80 AT4G22880.2
AT4G22880.1
AT4G22880.3
LDOX
leucoanthocyanidin dioxygenase
Chr2_+_18253610 0.80 AT2G44130.1
AT2G44130
Galactose oxidase/kelch repeat superfamily protein
Chr1_-_28609225 0.80 AT1G76250.1
AT1G76250
transmembrane protein
Chr5_-_9247540 0.79 AT5G26340.1
MSS1
Major facilitator superfamily protein
Chr2_-_7925918 0.79 AT2G18210.1
AT2G18210
hypothetical protein
Chr4_-_17267472 0.79 AT4G36610.1
AT4G36610
alpha/beta-Hydrolases superfamily protein
Chr1_+_4604688 0.79 AT1G13420.1
ST4B
sulfotransferase 4B
Chr5_+_2237474 0.78 AT5G07190.1
AT5G07190.2
ATS3
embryo-specific protein 3
Chr4_+_8634508 0.78 AT4G15120.1
AT4G15120
VQ motif-containing protein
Chr2_+_7275657 0.78 AT2G16760.1
AT2G16760
Calcium-dependent phosphotriesterase superfamily protein
Chr5_-_17166032 0.78 AT5G42800.1
DFR
dihydroflavonol 4-reductase
Chr5_-_20191604 0.77 AT5G49690.1
AT5G49690
UDP-Glycosyltransferase superfamily protein
Chr5_-_22358381 0.77 AT5G55090.1
AT5G55090.2
MAPKKK15
mitogen-activated protein kinase kinase kinase 15
Chr1_+_2867203 0.76 AT1G08920.1
AT1G08920.2
AT1G08920.3
ESL1
ERD (early response to dehydration) six-like 1
Chr1_+_5940292 0.76 AT1G17345.1
AT1G17345
SAUR-like auxin-responsive protein family
Chr5_-_7250770 0.74 AT5G21940.1
AT5G21940
hybrid signal transduction histidine kinase M-like protein
Chr1_-_24171502 0.74 AT1G65060.2
AT1G65060.1
4CL3
4-coumarate:CoA ligase 3
Chr3_-_11400332 0.73 AT3G29590.1
AT5MAT
HXXXD-type acyl-transferase family protein
Chr1_+_6623823 0.72 AT1G19190.1
AT1G19190
alpha/beta-Hydrolases superfamily protein
Chr5_+_320349 0.72 AT5G01830.1
SAUR21
ARM repeat superfamily protein
Chr5_+_24915807 0.71 AT5G62020.1
HSFB2A
heat shock transcription factor B2A
Chr2_-_12301723 0.70 AT2G28670.1
ESB1
Disease resistance-responsive (dirigent-like protein) family protein
Chr4_+_13901142 0.68 AT4G27920.1
PYL10
PYR1-like 10
Chr4_+_11907355 0.68 AT4G22620.1
AT4G22620
SAUR-like auxin-responsive protein family
Chr1_+_3919237 0.67 AT1G11655.1
AT1G11655
hypothetical protein
Chr2_-_14740146 0.67 AT2G34930.1
AT2G34930
disease resistance family protein / LRR family protein
Chr2_-_16545746 0.67 AT2G39700.1
EXPA4
expansin A4
Chr2_+_11669629 0.67 AT2G27260.1
AT2G27260
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr5_+_18905258 0.67 AT5G46590.1
AT5G46590.2
NAC096
NAC domain containing protein 96
Chr2_-_6920319 0.67 AT2G15880.1
AT2G15880
Leucine-rich repeat (LRR) family protein
Chr1_-_24062804 0.66 AT1G64780.1
AMT1%3B2
ammonium transporter 1;2
Chr5_+_24748023 0.66 AT5G61550.1
AT5G61550.3
AT5G61550.2
AT5G61550.4
AT5G61550
U-box domain-containing protein kinase family protein
Chr5_+_21383979 0.66 AT5G52750.2
AT5G52750.1
AT5G52750
Heavy metal transport/detoxification superfamily protein
Chr5_-_4566988 0.66 AT5G14150.1
AT5G14150.2
AT5G14150
Emb:.1 protein, putative (Protein of unknown function, DUF642)
Chr2_-_9207125 0.66 AT2G21490.1
LEA
dehydrin LEA
Chr5_+_8005097 0.66 AT5G23730.1
RUP2
Transducin/WD40 repeat-like superfamily protein
Chr3_+_9413052 0.66 AT3G25790.2
AT3G25790.1
AT3G25790
myb-like transcription factor family protein
Chr2_-_15186852 0.65 AT2G36210.1
AT2G36210
SAUR-like auxin-responsive protein family
Chr1_+_18121434 0.65 AT1G48990.1
AT1G48990
Oleosin family protein
Chr1_-_11116195 0.65 AT1G31130.1
AT1G31130
polyadenylate-binding protein 1-B-binding protein
Chr1_-_6908805 0.65 AT1G19900.1
AT1G19900
glyoxal oxidase-related protein
Chr2_+_9737583 0.65 AT2G22860.1
PSK2
phytosulfokine 2 precursor
Chr5_-_20940895 0.65 AT5G51550.1
EXL3
EXORDIUM like 3
Chr1_-_10720843 0.65 AT1G30370.1
DLAH
alpha/beta-Hydrolases superfamily protein
Chr1_-_23013477 0.64 AT1G62290.5
AT1G62290.6
AT1G62290.1
AT1G62290.3
AT1G62290.4
AT1G62290.2
AT1G62290
Saposin-like aspartyl protease family protein
Chr4_+_5668435 0.64 AT4G08868.1
AT4G08868
hypothetical protein
Chr4_+_6836106 0.64 AT4G11211.1
AT4G11211
hypothetical protein
Chr1_+_6061895 0.63 AT1G17620.1
AT1G17620
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr1_+_17065111 0.62 AT1G45130.1
BGAL5
beta-galactosidase 5
Chr3_+_4642657 0.62 AT3G14020.2
NF-YA6
nuclear factor Y, subunit A6
Chr5_+_19281374 0.62 AT5G47530.1
AT5G47530
Auxin-responsive family protein
Chr1_+_25657757 0.62 AT1G68440.1
AT1G68440
transmembrane protein
Chr5_-_22221968 0.61 AT5G54690.1
GAUT12
galacturonosyltransferase 12
Chr1_-_23257463 0.61 AT1G62800.1
AT1G62800.3
AT1G62800.2
ASP4
aspartate aminotransferase 4
Chr5_-_5622542 0.61 AT5G17090.1
AT5G17090
Cystatin/monellin superfamily protein
Chr3_+_4641930 0.61 AT3G14020.1
NF-YA6
nuclear factor Y, subunit A6
Chr4_+_1158783 0.61 AT4G02655.2
AT4G02655.1
AT4G02655
transmembrane protein
Chr5_-_19817831 0.61 AT5G48880.3
AT5G48880.4
AT5G48880.1
AT5G48880.2
KAT5
peroxisomal 3-keto-acyl-CoA thiolase 2
Chr2_-_15925887 0.61 AT2G38060.2
AT2G38060.1
PHT4%3B2
phosphate transporter 4;2
Chr5_+_2560328 0.60 AT5G07990.1
TT7
Cytochrome P450 superfamily protein
Chr2_-_11461099 0.60 AT2G26880.1
AGL41
AGAMOUS-like 41
Chr2_-_9733545 0.60 AT2G22850.2
AT2G22850.1
bZIP6
basic leucine-zipper 6
Chr1_-_88409 0.60 AT1G01200.1
RABA3
RAB GTPase homolog A3
Chr5_+_5658416 0.60 AT5G17220.1
GSTF12
glutathione S-transferase phi 12
Chr2_+_7782712 0.59 AT2G17920.1
AT2G17920
nucleic acid binding / zinc ion binding protein
Chr5_+_9234600 0.59 AT5G26310.1
UGT72E3
UDP-Glycosyltransferase superfamily protein
Chr4_-_14592610 0.59 AT4G29800.1
PLP8
PATATIN-like protein 8
Chr2_-_19215210 0.59 AT2G46760.1
GulLO6
D-arabinono-1,4-lactone oxidase family protein
Chr3_-_15092521 0.59 AT3G43110.1
AT3G43110
transmembrane protein
Chr5_-_18383693 0.59 AT5G45350.2
AT5G45350.4
AT5G45350.3
AT5G45350.5
AT5G45350.7
AT5G45350
proline-rich family protein
Chr4_+_17882644 0.59 AT4G38080.1
AT4G38080
hydroxyproline-rich glycoprotein family protein
Chr5_-_3971452 0.59 AT5G12270.1
AT5G12270
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_-_18914739 0.58 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
Chr4_+_14796695 0.58 AT4G30210.3
AT4G30210.2
AT4G30210.1
ATR2
P450 reductase 2
Chr1_+_17065858 0.58 AT1G45130.2
BGAL5
beta-galactosidase 5
Chr5_+_2210562 0.58 AT5G07130.3
AT5G07130.1
LAC13
laccase 13
Chr5_+_9377249 0.58 AT5G26600.1
AT5G26600.2
AT5G26600
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr2_+_9684562 0.58 AT2G22770.1
NAI1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_-_12302358 0.58 AT2G28670.2
ESB1
Disease resistance-responsive (dirigent-like protein) family protein
Chr3_-_17337733 0.58 AT3G47070.1
AT3G47070
thylakoid soluble phosphoprotein
Chr5_-_671687 0.58 AT5G02890.1
AT5G02890
HXXXD-type acyl-transferase family protein
Chr4_-_14592825 0.57 AT4G29800.2
PLP8
PATATIN-like protein 8
Chr3_-_12366047 0.57 AT3G30737.1
AT3G30737

Chr5_-_6166040 0.57 AT5G18560.1
PUCHI
Integrase-type DNA-binding superfamily protein
Chr3_+_11581316 0.57 AT3G29755.1
AT3G29755

Chr4_-_10852303 0.57 AT4G20050.3
AT4G20050.2
AT4G20050.4
AT4G20050.5
QRT3
Pectin lyase-like superfamily protein
Chr3_-_9148525 0.57 AT3G25110.1
FaTA
fatA acyl-ACP thioesterase
Chr5_+_12616563 0.57 AT5G33382.1
AT5G33382

Chr4_-_5407320 0.56 AT4G08500.1
MEKK1
MAPK/ERK kinase kinase 1
Chr3_-_15617309 0.56 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_18003749 0.56 AT3G48560.1
CSR1
chlorsulfuron/imidazolinone resistant 1
Chr4_-_1548871 0.56 AT4G03480.1
AT4G03480.2
AT4G03480
Ankyrin repeat family protein
Chr3_-_19897412 0.56 AT3G53680.2
AT3G53680
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Chr2_+_12156022 0.56 AT2G28410.1
AT2G28410
transmembrane protein
Chr4_+_7924135 0.56 AT4G13615.1
AT4G13615
Uncharacterized protein family SERF
Chr3_+_5052725 0.56 AT3G15010.2
AT3G15010.1
AT3G15010
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr5_-_8011611 0.56 AT5G23750.2
AT5G23750.3
AT5G23750.1
AT5G23750
Remorin family protein
Chr1_-_28727111 0.55 AT1G76550.1
AT1G76550
Phosphofructokinase family protein
Chr1_+_20525654 0.55 AT1G55020.1
LOX1
lipoxygenase 1
Chr1_-_1257893 0.55 AT1G04580.1
AO4
aldehyde oxidase 4
Chr1_+_2277830 0.55 AT1G07420.2
SMO2-1
sterol 4-alpha-methyl-oxidase 2-1
Chr4_-_8726733 0.55 AT4G15290.1
ATCSLB05
Cellulose synthase family protein
Chr1_-_9973942 0.55 AT1G28400.1
AT1G28400
GATA zinc finger protein
Chr3_-_22933362 0.55 AT3G61920.1
AT3G61920
UvrABC system protein C
Chr1_+_2277555 0.55 AT1G07420.1
SMO2-1
sterol 4-alpha-methyl-oxidase 2-1
Chr3_-_15617149 0.55 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_12042348 0.54 AT2G28250.3
NCRK
Protein kinase superfamily protein
Chr5_-_18383492 0.54 AT5G45350.6
AT5G45350
proline-rich family protein
Chr1_-_9246652 0.54 AT1G26740.1
AT1G26740
Ribosomal L32p protein family
Chr5_-_2176446 0.54 AT5G07010.1
ST2A
sulfotransferase 2A
Chr3_+_2612175 0.54 AT3G08600.1
AT3G08600
transmembrane protein, putative (DUF1191)
Chr4_-_16207956 0.54 AT4G33790.2
AT4G33790.1
CER4
Jojoba acyl CoA reductase-related male sterility protein
Chr2_+_7679008 0.54 AT2G17680.1
AT2G17680
DUF241 domain protein, putative (DUF241)
Chr5_-_7669410 0.54 AT5G22930.1
AT5G22930
enabled-like protein (DUF1635)
Chr2_+_10914511 0.54 AT2G25650.1
AT2G25650
DNA-binding storekeeper protein-related transcriptional regulator
Chr3_-_19897955 0.54 AT3G53680.1
AT3G53680
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Chr1_+_6917020 0.54 AT1G19930.1
AT1G19930
Galactose oxidase/kelch repeat superfamily protein
Chr1_+_9188945 0.54 AT1G26590.2
AT1G26590
C2H2-like zinc finger protein
Chr4_-_9047449 0.54 AT4G15960.1
AT4G15960
alpha/beta-Hydrolases superfamily protein
Chr5_-_8277406 0.53 AT5G24313.1
AT5G24313
transmembrane protein
Chr5_+_7147890 0.53 AT5G21050.1
AT5G21050
hyccin

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G09540

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 3.5 GO:0043617 cellular response to sucrose starvation(GO:0043617)
0.5 2.7 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.5 1.5 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.5 1.4 GO:0015840 urea transport(GO:0015840)
0.4 1.3 GO:0033530 raffinose metabolic process(GO:0033530)
0.4 1.1 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.3 0.5 GO:0035865 cellular response to potassium ion(GO:0035865)
0.3 1.3 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.2 1.0 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.2 1.1 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.2 1.0 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.2 0.6 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.2 1.4 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.2 3.8 GO:0046688 response to copper ion(GO:0046688)
0.2 2.0 GO:0080144 amino acid homeostasis(GO:0080144)
0.2 0.8 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.2 0.8 GO:1902767 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.2 1.9 GO:0015749 monosaccharide transport(GO:0015749)
0.1 0.6 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.1 0.6 GO:0010432 bract development(GO:0010432)
0.1 1.8 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 1.0 GO:0015689 molybdate ion transport(GO:0015689)
0.1 0.8 GO:0031929 TOR signaling(GO:0031929)
0.1 0.4 GO:0009996 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.1 1.5 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.6 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.1 4.8 GO:0010208 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.1 0.4 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.1 1.2 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.1 0.5 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.1 0.5 GO:0032889 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144)
0.1 0.5 GO:0048205 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 0.5 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.1 1.4 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 2.6 GO:0030091 protein repair(GO:0030091)
0.1 0.7 GO:0046621 negative regulation of organ growth(GO:0046621)
0.1 0.9 GO:0072659 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.1 0.9 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 1.6 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 0.3 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.1 0.4 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 1.7 GO:0006814 sodium ion transport(GO:0006814)
0.1 0.4 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.1 0.4 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.1 0.5 GO:0010325 raffinose family oligosaccharide biosynthetic process(GO:0010325)
0.1 0.6 GO:0009099 valine biosynthetic process(GO:0009099)
0.1 0.2 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.1 0.9 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.1 GO:0015786 UDP-glucose transport(GO:0015786)
0.1 0.8 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.1 1.9 GO:0010227 floral organ abscission(GO:0010227)
0.1 0.5 GO:1904482 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.1 0.4 GO:0051289 protein homotetramerization(GO:0051289)
0.1 0.2 GO:0009413 response to flooding(GO:0009413)
0.1 1.2 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.1 1.2 GO:0006574 valine metabolic process(GO:0006573) valine catabolic process(GO:0006574)
0.1 2.6 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.1 0.2 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.1 0.4 GO:1902065 response to L-glutamate(GO:1902065)
0.1 0.3 GO:0000012 single strand break repair(GO:0000012)
0.1 0.3 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.1 0.4 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.1 0.2 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.1 0.2 GO:0006148 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.1 0.2 GO:0010482 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.1 0.8 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.1 0.3 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 0.2 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.1 0.2 GO:0045827 negative regulation of isoprenoid metabolic process(GO:0045827)
0.1 0.2 GO:0009298 GDP-mannose biosynthetic process(GO:0009298)
0.1 0.4 GO:0006032 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.1 0.3 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 1.1 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.1 0.2 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 0.3 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.0 0.5 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.3 GO:0015846 polyamine transport(GO:0015846)
0.0 0.7 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.5 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 0.8 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.7 GO:0007008 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 0.5 GO:0030834 regulation of actin filament depolymerization(GO:0030834)
0.0 0.3 GO:0048629 trichome patterning(GO:0048629)
0.0 0.2 GO:0043153 entrainment of circadian clock by photoperiod(GO:0043153)
0.0 1.2 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.1 GO:0071454 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.0 1.0 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.0 0.2 GO:1902475 L-alpha-amino acid transmembrane transport(GO:1902475)
0.0 0.3 GO:0043447 alkane biosynthetic process(GO:0043447)
0.0 0.4 GO:0046471 phosphatidylglycerol metabolic process(GO:0046471)
0.0 0.2 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.0 1.1 GO:0019915 lipid storage(GO:0019915)
0.0 0.5 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.0 0.2 GO:0046417 chorismate metabolic process(GO:0046417)
0.0 0.5 GO:0008216 spermidine metabolic process(GO:0008216)
0.0 0.5 GO:0010274 hydrotropism(GO:0010274)
0.0 0.3 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.2 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.0 0.2 GO:0060919 auxin influx(GO:0060919)
0.0 0.6 GO:0001709 cell fate determination(GO:0001709)
0.0 0.5 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.0 0.1 GO:0002119 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.0 0.2 GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290)
0.0 0.2 GO:0019419 sulfate reduction(GO:0019419)
0.0 0.4 GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation(GO:0006616)
0.0 0.2 GO:0006000 fructose metabolic process(GO:0006000)
0.0 0.3 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.0 0.4 GO:0051865 protein autoubiquitination(GO:0051865)
0.0 0.6 GO:0010555 response to mannitol(GO:0010555)
0.0 0.2 GO:0051014 actin filament severing(GO:0051014)
0.0 0.1 GO:0009915 phloem sucrose loading(GO:0009915)
0.0 0.5 GO:0015770 sucrose transport(GO:0015770)
0.0 0.2 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.0 0.2 GO:0010018 far-red light signaling pathway(GO:0010018)
0.0 0.4 GO:0030042 actin filament depolymerization(GO:0030042)
0.0 0.1 GO:0033239 negative regulation of ethylene biosynthetic process(GO:0010366) negative regulation of sulfur amino acid metabolic process(GO:0031336) negative regulation of cellular amine metabolic process(GO:0033239) negative regulation of cellular amino acid metabolic process(GO:0045763) negative regulation of sulfur metabolic process(GO:0051175) negative regulation of olefin metabolic process(GO:1900909) negative regulation of olefin biosynthetic process(GO:1900912)
0.0 0.4 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.0 0.2 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.0 0.8 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.1 GO:0009963 positive regulation of flavonoid biosynthetic process(GO:0009963)
0.0 0.2 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0 0.1 GO:0080009 mRNA methylation(GO:0080009)
0.0 0.5 GO:0006085 acetyl-CoA biosynthetic process(GO:0006085)
0.0 1.4 GO:0010162 seed dormancy process(GO:0010162) dormancy process(GO:0022611)
0.0 0.6 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.1 GO:0019079 viral genome replication(GO:0019079)
0.0 0.2 GO:0006183 GTP biosynthetic process(GO:0006183)
0.0 0.1 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.0 0.1 GO:0071323 cellular response to chitin(GO:0071323)
0.0 0.1 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.2 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.0 0.6 GO:0030050 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.6 GO:0042335 cuticle development(GO:0042335)
0.0 0.2 GO:0016233 telomere capping(GO:0016233)
0.0 0.2 GO:0022610 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.2 GO:0016554 cytidine to uridine editing(GO:0016554)
0.0 0.2 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348) positive regulation of cell wall organization or biogenesis(GO:1903340)
0.0 1.2 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.2 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.0 0.4 GO:0008360 regulation of cell shape(GO:0008360)
0.0 0.1 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 0.3 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.4 GO:0009692 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 1.5 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.8 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.0 0.4 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.5 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.6 GO:0009813 flavonoid biosynthetic process(GO:0009813)
0.0 0.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.7 GO:0010089 xylem development(GO:0010089)
0.0 0.4 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.0 0.1 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.0 0.5 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.1 GO:0010155 regulation of proton transport(GO:0010155)
0.0 0.2 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.5 GO:0010022 meristem determinacy(GO:0010022)
0.0 0.4 GO:0030244 cellulose biosynthetic process(GO:0030244)
0.0 1.8 GO:0010200 response to chitin(GO:0010200)
0.0 0.3 GO:0008643 carbohydrate transport(GO:0008643)
0.0 0.1 GO:0006561 proline biosynthetic process(GO:0006561)
0.0 0.2 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.0 1.2 GO:0009741 response to brassinosteroid(GO:0009741)
0.0 0.3 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.6 GO:0002239 response to oomycetes(GO:0002239)
0.0 0.4 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.1 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.0 GO:0006788 heme oxidation(GO:0006788)
0.0 0.3 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.3 1.0 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.2 2.5 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.2 0.5 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.1 0.8 GO:0038201 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.1 1.3 GO:0048226 Casparian strip(GO:0048226)
0.1 0.5 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.6 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 1.9 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.1 0.4 GO:0005960 glycine cleavage complex(GO:0005960)
0.1 1.1 GO:0005801 cis-Golgi network(GO:0005801)
0.1 0.2 GO:0036387 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.1 0.7 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.1 0.2 GO:1990415 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.1 0.2 GO:0035102 PRC1 complex(GO:0035102)
0.1 0.3 GO:0005782 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1 6.3 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 1.1 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 13.0 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.8 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.0 0.2 GO:0030870 Mre11 complex(GO:0030870)
0.0 0.5 GO:0045177 apical part of cell(GO:0045177)
0.0 1.6 GO:0005764 lysosome(GO:0005764)
0.0 0.6 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.4 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 0.6 GO:0016459 myosin complex(GO:0016459)
0.0 0.8 GO:0005811 lipid particle(GO:0005811)
0.0 0.1 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 1.7 GO:0090406 pollen tube(GO:0090406)
0.0 0.4 GO:0031965 nuclear membrane(GO:0031965)
0.0 0.3 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.0 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.1 GO:0070390 transcription export complex 2(GO:0070390)
0.0 0.6 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.1 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 0.2 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 30.0 GO:0005576 extracellular region(GO:0005576)
0.0 0.1 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 3.5 GO:0042085 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.5 1.4 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.4 3.1 GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity(GO:0004066)
0.4 1.3 GO:0052692 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.4 1.1 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.4 1.5 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.4 1.1 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.3 1.0 GO:0009374 biotin binding(GO:0009374)
0.3 0.8 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.3 2.9 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.3 5.8 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.3 1.0 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.2 1.5 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.2 0.7 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.2 1.2 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.2 2.0 GO:0004096 catalase activity(GO:0004096)
0.2 1.3 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
0.2 0.8 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.2 0.6 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.2 2.0 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.2 0.5 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.2 0.9 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
0.2 0.5 GO:0010331 gibberellin binding(GO:0010331)
0.2 1.1 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.2 0.3 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.2 0.5 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.1 0.4 GO:0035671 enone reductase activity(GO:0035671)
0.1 1.1 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.1 0.6 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.1 1.0 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.1 0.5 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 0.4 GO:0045430 chalcone isomerase activity(GO:0045430)
0.1 0.4 GO:0016642 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.1 1.0 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.1 0.5 GO:0008493 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.4 GO:0010280 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.1 0.5 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.1 0.8 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.1 0.5 GO:0030523 dihydrolipoamide S-acyltransferase activity(GO:0030523)
0.1 0.6 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.1 0.5 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.9 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.3 GO:0000064 L-ornithine transmembrane transporter activity(GO:0000064)
0.1 0.6 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.1 1.1 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.1 0.3 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 0.6 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.1 0.5 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.1 0.4 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.1 0.9 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 0.4 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 0.4 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.1 0.6 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.1 1.1 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.1 2.1 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.9 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.1 1.1 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 1.2 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.5 GO:0052655 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.5 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.5 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.1 0.5 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 1.6 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.1 0.7 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.1 0.3 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.1 0.3 GO:0004072 aspartate kinase activity(GO:0004072)
0.1 0.2 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.1 0.8 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 0.5 GO:0015210 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.1 0.4 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.1 0.3 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.1 0.2 GO:0004106 chorismate mutase activity(GO:0004106)
0.1 0.2 GO:0032131 alkylated DNA binding(GO:0032131)
0.1 0.4 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.1 1.3 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 0.2 GO:0019789 SUMO transferase activity(GO:0019789)
0.1 0.2 GO:0004359 glutaminase activity(GO:0004359)
0.0 0.4 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.0 2.1 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.8 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.0 2.2 GO:0015081 sodium ion transmembrane transporter activity(GO:0015081)
0.0 0.6 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.2 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.0 1.0 GO:0017069 snRNA binding(GO:0017069)
0.0 0.2 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.0 0.4 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.0 0.3 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.3 GO:0051185 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 0.2 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.3 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.0 0.2 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.0 0.4 GO:0008083 growth factor activity(GO:0008083)
0.0 0.2 GO:0042879 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.0 1.6 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.1 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.0 0.9 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.0 0.2 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.4 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.6 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 1.3 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.0 0.1 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.0 0.4 GO:0015293 symporter activity(GO:0015293)
0.0 0.5 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.4 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 0.3 GO:0051119 sugar transmembrane transporter activity(GO:0051119)
0.0 0.1 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.0 0.4 GO:0030674 protein binding, bridging(GO:0030674)
0.0 3.8 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.8 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.4 GO:0008061 chitin binding(GO:0008061)
0.0 0.3 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.4 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.3 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.3 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.3 GO:0008199 ferric iron binding(GO:0008199)
0.0 0.2 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.1 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 0.3 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.0 0.8 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.6 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.2 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.2 GO:0008865 fructokinase activity(GO:0008865)
0.0 0.5 GO:0031386 protein tag(GO:0031386)
0.0 0.6 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 1.1 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.2 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.0 0.3 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 1.4 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.4 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.6 GO:0005179 hormone activity(GO:0005179)
0.0 0.7 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.1 GO:0016151 nickel cation binding(GO:0016151)
0.0 0.2 GO:0031078 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.1 GO:0016211 glutamate-ammonia ligase activity(GO:0004356) ammonia ligase activity(GO:0016211) acid-ammonia (or amide) ligase activity(GO:0016880)
0.0 0.8 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 1.0 GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors(GO:0016706)
0.0 0.2 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 1.5 GO:0004601 peroxidase activity(GO:0004601)
0.0 1.3 GO:0016410 N-acyltransferase activity(GO:0016410)
0.0 0.2 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.0 0.6 GO:0044389 ubiquitin protein ligase binding(GO:0031625) ubiquitin-like protein ligase binding(GO:0044389)
0.0 0.7 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144)
0.0 0.2 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.1 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.0 0.2 GO:0070628 proteasome binding(GO:0070628)
0.0 0.1 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 0.1 GO:0004003 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.2 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.5 GO:0000295 adenine nucleotide transmembrane transporter activity(GO:0000295)
0.0 0.1 GO:0035198 miRNA binding(GO:0035198)
0.0 0.1 GO:0022840 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.0 0.1 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.0 0.9 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.2 GO:0004499 N,N-dimethylaniline monooxygenase activity(GO:0004499)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.2 0.7 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.2 1.3 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.2 0.6 PID MYC PATHWAY C-MYC pathway
0.1 0.5 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.0 0.2 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.0 0.2 PID TELOMERASE PATHWAY Regulation of Telomerase

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
0.2 1.4 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.4 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.1 0.5 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis