Project

GSE130291:vernalization in Arabidopsis thaliana

Navigation
Downloads

Results for AT1G08010

Z-value: 4.21

Transcription factors associated with AT1G08010

Gene Symbol Gene ID Gene Info
AT1G08010 GATA transcription factor 11

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
GATA11arTal_v1_Chr1_-_2487850_2487850-0.078.2e-01Click!

Activity profile of AT1G08010 motif

Sorted Z-values of AT1G08010 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_18189523 5.84 AT5G45070.1
phloem protein 2-A8
Chr5_-_14753088 5.67 AT5G37260.1
Homeodomain-like superfamily protein
Chr3_+_5025383 4.88 AT3G14940.2
phosphoenolpyruvate carboxylase 3
Chr3_-_20576249 4.87 AT3G55500.1
expansin A16
Chr3_+_5025184 4.83 AT3G14940.1
phosphoenolpyruvate carboxylase 3
Chr4_+_11753842 4.72 AT4G22212.1
defensin-like protein
Chr1_-_3167924 4.45 AT1G09780.1
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
Chr1_-_598657 4.36 AT1G02730.1
cellulose synthase-like D5
Chr3_-_20142763 4.22 AT3G54400.1
Eukaryotic aspartyl protease family protein
Chr1_-_24703041 4.12 AT1G66270.2
AT1G66270.1
Glycosyl hydrolase superfamily protein
Chr1_+_18035967 3.76 AT1G48750.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_7718118 3.47 AT5G23020.1
2-isopropylmalate synthase 2
Chr5_+_5092140 3.45 AT5G15650.1
reversibly glycosylated polypeptide 2
Chr5_+_18537239 3.36 AT5G45700.1
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr4_+_11182092 3.27 AT4G20890.1
tubulin beta-9 chain
Chr3_+_8172479 3.24 AT3G23000.1
CBL-interacting protein kinase 7
Chr2_+_11401118 3.22 AT2G26760.1
Cyclin B1;4
Chr5_+_3889906 3.11 AT5G12050.1
rho GTPase-activating protein
Chr3_+_415389 3.11 AT3G02230.1
reversibly glycosylated polypeptide 1
Chr1_+_12261165 3.08 AT1G33800.1
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Chr3_-_11269228 3.07 AT3G29360.2
AT3G29360.1
UDP-glucose 6-dehydrogenase family protein
Chr1_-_18753941 3.04 AT1G50630.1
AT1G50630.2
extracellular ligand-gated ion channel protein (DUF3537)
Chr1_-_24709996 3.04 AT1G66280.1
Glycosyl hydrolase superfamily protein
Chr5_+_23619459 3.02 AT5G58420.1
Ribosomal protein S4 (RPS4A) family protein
Chr5_+_15543115 3.01 AT5G38820.1
AT5G38820.2
Transmembrane amino acid transporter family protein
Chr4_+_16904059 3.00 AT4G35630.1
phosphoserine aminotransferase
Chr3_-_9981620 2.94 AT3G27060.1
Ferritin/ribonucleotide reductase-like family protein
Chr3_-_723784 2.92 AT3G03130.1
lisH domain-like protein
Chr3_+_2176788 2.91 AT3G06890.1
transmembrane protein
Chr5_-_17022723 2.91 AT5G42570.1
B-cell receptor-associated 31-like protein
Chr1_-_8961183 2.86 AT1G25510.1
Eukaryotic aspartyl protease family protein
Chr5_-_4873683 2.82 AT5G15050.1
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr3_-_19139423 2.74 AT3G51600.1
lipid transfer protein 5
Chr1_-_19888328 2.73 AT1G53310.3
AT1G53310.1
AT1G53310.2
phosphoenolpyruvate carboxylase 1
Chr5_-_17755742 2.71 AT5G44110.2
AT5G44110.4
AT5G44110.3
AT5G44110.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_-_16080721 2.69 AT4G33400.1
Vacuolar import/degradation, Vid27-related protein
Chr5_+_8584535 2.68 AT5G24920.1
glutamine dumper 5
Chr5_-_3728726 2.63 AT5G11590.1
Integrase-type DNA-binding superfamily protein
Chr5_+_15742543 2.57 AT5G39320.1
UDP-glucose 6-dehydrogenase family protein
Chr5_-_17861150 2.57 AT5G44340.1
tubulin beta chain 4
Chr4_+_12588378 2.56 AT4G24275.1
hypothetical protein
Chr5_-_22491266 2.54 AT5G55520.1
AT5G55520.2
kinesin-like protein
Chr2_+_7666548 2.52 AT2G17630.1
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr5_-_19977620 2.52 AT5G49280.1
hydroxyproline-rich glycoprotein family protein
Chr1_-_18124289 2.51 AT1G49000.1
transmembrane protein
Chr1_+_23448812 2.50 AT1G63220.1
AT1G63220.2
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr1_-_11719988 2.49 AT1G32450.1
nitrate transporter 1.5
Chr1_+_10252241 2.49 AT1G29310.1
AT1G29310.2
SecY protein transport family protein
Chr5_+_17451488 2.49 AT5G43420.1
RING/U-box superfamily protein
Chr3_-_19629204 2.48 AT3G52930.1
Aldolase superfamily protein
Chr5_-_21357219 2.48 AT5G52650.1
RNA binding Plectin/S10 domain-containing protein
Chr1_-_2972334 2.45 AT1G09200.1
Histone superfamily protein
Chr2_-_14295353 2.41 AT2G33790.1
arabinogalactan protein 30
Chr4_-_1298500 2.36 AT4G02930.1
GTP binding Elongation factor Tu family protein
Chr4_+_608454 2.36 AT4G01450.1
AT4G01450.4
AT4G01450.3
nodulin MtN21 /EamA-like transporter family protein
Chr4_+_8054861 2.36 AT4G13940.4
AT4G13940.3
AT4G13940.2
S-adenosyl-L-homocysteine hydrolase
Chr5_-_6684744 2.36 AT5G19770.1
tubulin alpha-3
Chr3_+_7229390 2.35 AT3G20670.1
histone H2A 13
Chr5_-_25646845 2.35 AT5G64080.2
AT5G64080.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_-_15481377 2.33 AT2G36880.2
AT2G36880.1
methionine adenosyltransferase 3
Chr2_-_12646057 2.33 AT2G29550.1
tubulin beta-7 chain
Chr5_+_22694823 2.33 AT5G56040.2
AT5G56040.1
Leucine-rich receptor-like protein kinase family protein
Chr4_+_8054673 2.33 AT4G13940.1
S-adenosyl-L-homocysteine hydrolase
Chr3_+_20196329 2.32 AT3G54560.2
histone H2A 11
Chr5_+_2571957 2.31 AT5G08020.1
RPA70-kDa subunit B
Chr5_+_880148 2.31 AT5G03510.1
C2H2-type zinc finger family protein
Chr3_-_1824309 2.30 AT3G06035.1
Glycoprotein membrane precursor GPI-anchored
Chr1_-_6378580 2.27 AT1G18540.1
Ribosomal protein L6 family protein
Chr1_+_2412938 2.25 AT1G07790.1
Histone superfamily protein
Chr1_-_22866666 2.24 AT1G61870.1
pentatricopeptide repeat 336
Chr5_-_13911225 2.24 AT5G35740.1
Carbohydrate-binding X8 domain superfamily protein
Chr4_-_8050157 2.23 AT4G13930.1
serine hydroxymethyltransferase 4
Chr3_-_5892216 2.23 AT3G17240.2
AT3G17240.3
AT3G17240.1
lipoamide dehydrogenase 2
Chr2_+_13328862 2.21 AT2G31270.1
CDT1-like protein A
Chr1_-_21088554 2.20 AT1G56330.1
secretion-associated RAS 1B
Chr1_-_1043887 2.20 AT1G04040.1
HAD superfamily, subfamily IIIB acid phosphatase
Chr4_+_14762819 2.19 AT4G30170.1
Peroxidase family protein
Chr5_+_10632241 2.18 AT5G28626.1

Chr5_+_15409684 2.18 AT5G38480.1
AT5G38480.2
AT5G38480.3
general regulatory factor 3
Chr3_+_10338148 2.17 AT3G27880.1
hypothetical protein (DUF1645)
Chr3_+_20196140 2.17 AT3G54560.1
histone H2A 11
Chr2_-_19140849 2.17 AT2G46620.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_-_7301633 2.16 AT1G20950.1
Phosphofructokinase family protein
Chr5_-_8331963 2.15 AT5G24400.1
NagB/RpiA/CoA transferase-like superfamily protein
Chr2_+_9068252 2.14 AT2G21160.1
AT2G21160.2
Translocon-associated protein (TRAP), alpha subunit
Chr1_+_1198303 2.14 AT1G04430.3
AT1G04430.2
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_7111352 2.13 AT5G20950.2
AT5G20950.1
AT5G20950.3
Glycosyl hydrolase family protein
Chr5_+_9830251 2.13 AT5G27760.2
AT5G27760.1
Hypoxia-responsive family protein
Chr3_-_2334185 2.12 AT3G07320.1
O-Glycosyl hydrolases family 17 protein
Chr5_+_22312976 2.09 AT5G54970.1
hypothetical protein
Chr1_-_4630821 2.09 AT1G13510.1
hypothetical protein (DUF1262)
Chr3_-_2607573 2.09 AT3G08580.1
ADP/ATP carrier 1
Chr3_+_8603212 2.08 AT3G23820.1
UDP-D-glucuronate 4-epimerase 6
Chr4_-_10464238 2.07 AT4G19120.3
AT4G19120.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_27283628 2.07 AT1G72470.1
exocyst subunit exo70 family protein D1
Chr5_+_22525771 2.06 AT5G55610.1
AT5G55610.2
isopentenyl-diphosphate delta-isomerase
Chr4_+_17097405 2.06 AT4G36130.1
Ribosomal protein L2 family
Chr3_-_2607895 2.06 AT3G08580.2
ADP/ATP carrier 1
Chr3_+_4964105 2.05 AT3G14790.2
AT3G14790.1
rhamnose biosynthesis 3
Chr4_+_11763625 2.04 AT4G22235.1
AT4G22235.2
defensin-like protein
Chr4_+_14017343 2.03 AT4G28310.1
microtubule-associated protein
Chr1_-_29926484 2.03 AT1G79550.1
phosphoglycerate kinase
Chr1_-_29926636 2.02 AT1G79550.2
phosphoglycerate kinase
Chr5_-_26129547 2.02 AT5G65390.1
arabinogalactan protein 7
Chr5_-_16832357 2.02 AT5G42110.1
hypothetical protein
Chr5_+_2825661 2.01 AT5G08690.1
ATP synthase alpha/beta family protein
Chr3_+_22337791 2.01 AT3G60440.1
AT3G60440.2
Phosphoglycerate mutase family protein
Chr5_-_19639529 2.00 AT5G48460.1
Actin binding Calponin homology (CH) domain-containing protein
Chr2_-_13051773 2.00 AT2G30640.1

Chr3_+_10053929 2.00 AT3G27230.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_4533119 2.00 AT5G14040.1
phosphate transporter 3;1
Chr2_+_9151940 1.99 AT2G21390.1
Coatomer, alpha subunit
Chr2_-_17720366 1.99 AT2G42570.1
TRICHOME BIREFRINGENCE-LIKE 39
Chr2_-_7643605 1.99 AT2G17560.2
AT2G17560.3
AT2G17560.1
high mobility group B4
Chr3_-_23000188 1.99 AT3G62110.2
AT3G62110.1
Pectin lyase-like superfamily protein
Chr5_+_19116719 1.97 AT5G47060.1
AT5G47060.2
hypothetical protein (DUF581)
Chr2_+_19437648 1.97 AT2G47360.1
transmembrane protein
Chr5_-_556623 1.96 AT5G02500.1
heat shock cognate protein 70-1
Chr5_-_556442 1.96 AT5G02500.2
heat shock cognate protein 70-1
Chr1_+_1197956 1.96 AT1G04430.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_+_2620713 1.96 AT3G08630.1
alphavirus core family protein (DUF3411)
Chr5_-_5030245 1.96 AT5G15490.1
UDP-glucose 6-dehydrogenase family protein
Chr3_+_1080942 1.95 AT3G04120.1
glyceraldehyde-3-phosphate dehydrogenase C subunit 1
Chr4_+_608273 1.95 AT4G01450.2
nodulin MtN21 /EamA-like transporter family protein
Chr3_+_2492260 1.95 AT3G07810.1
AT3G07810.2
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr3_-_15665480 1.95 AT3G43810.4
calmodulin 7
Chr4_-_16749964 1.94 AT4G35200.1
hypothetical protein (DUF241)
Chr1_+_18517586 1.93 AT1G50010.1
tubulin alpha-2 chain
Chr2_-_16115204 1.91 AT2G38490.1
CBL-interacting Serine/Threonine-kinase
Chr4_+_13444797 1.91 AT4G26650.1
AT4G26650.2
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_-_30067547 1.90 AT1G79930.2
AT1G79930.1
heat shock protein 91
Chr1_-_28453820 1.89 AT1G75780.1
tubulin beta-1 chain
Chr2_-_13386392 1.88 AT2G31390.1
pfkB-like carbohydrate kinase family protein
Chr1_-_4857975 1.88 AT1G14210.1
Ribonuclease T2 family protein
Chr4_+_15268446 1.86 AT4G31490.2
AT4G31490.1
Coatomer, beta subunit
Chr4_-_7780366 1.86 AT4G13370.1
serine/arginine repetitive matrix protein, putative (DUF936)
Chr3_+_22340859 1.86 AT3G60450.2
AT3G60450.1
Phosphoglycerate mutase family protein
Chr1_-_22417244 1.85 AT1G60890.2
AT1G60890.1
Phosphatidylinositol-4-phosphate 5-kinase family protein
Chr5_+_625254 1.85 AT5G02760.1
Protein phosphatase 2C family protein
Chr5_+_9480702 1.85 AT5G26940.3
AT5G26940.1
AT5G26940.2
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr1_+_19708011 1.84 AT1G52910.1
fiber (DUF1218)
Chr4_-_10464001 1.82 AT4G19120.2
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_-_22093060 1.82 AT1G59990.2
DEA(D/H)-box RNA helicase family protein
Chr1_+_19658614 1.82 AT1G52780.1
PII, uridylyltransferase (DUF2921)
Chr1_-_6155796 1.81 AT1G17890.2
AT1G17890.1
AT1G17890.3
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_26648897 1.81 AT5G66750.1
chromatin remodeling 1
Chr1_-_6506542 1.81 AT1G18850.1
hypothetical protein
Chr4_-_6734454 1.81 AT4G11010.1
nucleoside diphosphate kinase 3
Chr4_-_16344818 1.81 AT4G34131.1
UDP-glucosyl transferase 73B3
Chr1_-_22382422 1.80 AT1G60790.1
trichome birefringence-like protein (DUF828)
Chr3_+_5330194 1.80 AT3G15730.1
phospholipase D alpha 1
Chr3_-_532612 1.80 AT3G02530.1
TCP-1/cpn60 chaperonin family protein
Chr5_-_3427897 1.79 AT5G10840.1
Endomembrane protein 70 protein family
Chr1_+_19152508 1.79 AT1G51650.1
ATP synthase epsilon chain
Chr3_+_9154508 1.79 AT3G25140.1
Nucleotide-diphospho-sugar transferases superfamily protein
Chr1_+_8219808 1.78 AT1G23190.1
Phosphoglucomutase/phosphomannomutase family protein
Chr4_-_13411070 1.78 AT4G26570.2
AT4G26570.1
calcineurin B-like 3
Chr1_-_22093385 1.78 AT1G59990.1
DEA(D/H)-box RNA helicase family protein
Chr3_-_8138084 1.78 AT3G22950.2
AT3G22950.1
ADP-ribosylation factor C1
Chr4_-_10411467 1.78 AT4G19006.2
AT4G19006.1
Proteasome component (PCI) domain protein
Chr3_-_1825628 1.77 AT3G06040.2
AT3G06040.3
AT3G06040.1
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Chr5_-_20964537 1.77 AT5G51600.1
Microtubule associated protein (MAP65/ASE1) family protein
Chr3_+_686981 1.76 AT3G03050.1
cellulose synthase-like D3
Chr3_-_15666468 1.75 AT3G43810.1
AT3G43810.2
AT3G43810.3
calmodulin 7
Chr4_+_15268756 1.75 AT4G31490.3
Coatomer, beta subunit
Chr1_+_28098464 1.75 AT1G74790.1
catalytics
Chr1_+_30213705 1.75 AT1G80370.1
Cyclin A2;4
Chr2_-_17337269 1.75 AT2G41560.2
AT2G41560.3
autoinhibited Ca(2+)-ATPase, isoform 4
Chr2_+_11773187 1.74 AT2G27550.1
centroradiali
Chr2_-_3527460 1.74 AT2G07690.2
AT2G07690.1
Minichromosome maintenance (MCM2/3/5) family protein
Chr5_-_14623093 1.73 AT5G37010.1
rho GTPase-activating protein
Chr5_-_17877658 1.72 AT5G44370.1
phosphate transporter 4;6
Chr5_+_23074867 1.72 AT5G57020.1
myristoyl-CoA:protein N-myristoyltransferase
Chr1_-_10860322 1.72 AT1G30630.1
Coatomer epsilon subunit
Chr1_+_3273753 1.72 AT1G10030.1
ergosterol biosynthesis protein
Chr4_-_2495863 1.72 AT4G04910.1
AAA-type ATPase family protein
Chr2_+_14462023 1.72 AT2G34250.1
AT2G34250.2
SecY protein transport family protein
Chr3_-_19791695 1.72 AT3G53380.1
Concanavalin A-like lectin protein kinase family protein
Chr3_+_21893812 1.72 AT3G59220.1
pirin
Chr2_+_14462286 1.72 AT2G34250.3
SecY protein transport family protein
Chr3_+_14320943 1.71 AT3G42170.1
AT3G42170.2
BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER
Chr5_-_22822904 1.71 AT5G56350.1
Pyruvate kinase family protein
Chr1_+_2276030 1.71 AT1G07410.1
RAB GTPase homolog A2B
Chr1_+_17300951 1.71 AT1G47210.1
cyclin-dependent protein kinase 3;2
Chr5_+_15543481 1.70 AT5G38820.3
Transmembrane amino acid transporter family protein
Chr1_+_26032827 1.69 AT1G69250.2
Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein
Chr3_-_16630521 1.69 AT3G45310.2
AT3G45310.1
Cysteine proteinases superfamily protein
Chr5_-_20200468 1.69 AT5G49720.1
glycosyl hydrolase 9A1
Chr3_-_3492065 1.69 AT3G11130.1
Clathrin, heavy chain
Chr3_+_22151164 1.68 AT3G59970.3
AT3G59970.2
AT3G59970.1
methylenetetrahydrofolate reductase 1
Chr5_-_1925407 1.68 AT5G06300.1
Putative lysine decarboxylase family protein
Chr2_-_12785190 1.68 AT2G29980.1
fatty acid desaturase 3
Chr5_+_6810908 1.68 AT5G20180.3
AT5G20180.4
AT5G20180.1
AT5G20180.2
Ribosomal protein L36
Chr5_+_6782511 1.68 AT5G20080.1
FAD/NAD(P)-binding oxidoreductase
Chr2_+_1676999 1.67 AT2G04780.2
FASCICLIN-like arabinoogalactan 7
Chr1_+_26032637 1.67 AT1G69250.1
Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein
Chr1_+_13225168 1.67 AT1G35720.1
annexin 1
Chr5_+_16968655 1.67 AT5G42420.1
AT5G42420.2
Nucleotide-sugar transporter family protein
Chr5_+_26476166 1.67 AT5G66280.1
GDP-D-mannose 4,6-dehydratase 1
Chr1_-_3015255 1.66 AT1G09330.1
AT1G09330.2
golgi apparatus membrane protein-like protein ECHIDNA protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G08010

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.9 7.6 GO:0006065 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
1.7 5.2 GO:0071258 cellular response to gravity(GO:0071258)
1.4 5.7 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
1.4 4.1 GO:0045979 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
1.2 3.6 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
1.2 4.7 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
1.0 3.1 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
1.0 3.1 GO:0090239 regulation of histone H4 acetylation(GO:0090239)
1.0 5.1 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
1.0 4.9 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.9 2.8 GO:0002009 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.9 3.5 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.8 3.3 GO:0010394 homogalacturonan metabolic process(GO:0010394)
0.8 2.3 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.8 3.9 GO:0048358 mucilage pectin biosynthetic process(GO:0048358)
0.7 2.2 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.7 2.1 GO:0071461 cellular response to redox state(GO:0071461)
0.7 6.2 GO:0005513 detection of calcium ion(GO:0005513)
0.7 2.0 GO:0051775 response to redox state(GO:0051775)
0.6 10.3 GO:0000919 cell plate assembly(GO:0000919)
0.6 2.5 GO:0015739 sialic acid transport(GO:0015739)
0.6 1.9 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.6 4.4 GO:0019320 hexose catabolic process(GO:0019320)
0.6 4.9 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.6 2.4 GO:0051211 anisotropic cell growth(GO:0051211)
0.6 2.9 GO:0006106 fumarate metabolic process(GO:0006106)
0.6 1.7 GO:0006498 N-terminal protein lipidation(GO:0006498) N-terminal protein myristoylation(GO:0006499) protein myristoylation(GO:0018377)
0.5 2.2 GO:0002119 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.5 1.6 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
0.5 3.2 GO:0090481 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334) pyrimidine nucleotide-sugar transmembrane transport(GO:0090481)
0.5 4.7 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.5 2.1 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.5 3.1 GO:0043481 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.5 2.0 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.5 2.5 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.5 2.4 GO:0006169 adenosine salvage(GO:0006169) adenosine biosynthetic process(GO:0046086)
0.5 1.4 GO:0055047 generative cell mitosis(GO:0055047)
0.5 1.4 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.5 2.4 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.5 11.1 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.5 4.1 GO:0009804 coumarin metabolic process(GO:0009804)
0.5 4.5 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.4 1.3 GO:0071569 protein ufmylation(GO:0071569)
0.4 2.2 GO:0070861 regulation of protein exit from endoplasmic reticulum(GO:0070861) positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.4 1.7 GO:0035494 SNARE complex disassembly(GO:0035494)
0.4 1.3 GO:0046705 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.4 2.5 GO:0006013 mannose metabolic process(GO:0006013)
0.4 1.2 GO:0019695 choline metabolic process(GO:0019695)
0.4 1.2 GO:1900032 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.4 4.0 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.4 2.7 GO:0051952 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.4 1.5 GO:0010482 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.4 1.5 GO:0050792 regulation of viral process(GO:0050792)
0.4 17.1 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.4 3.6 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.4 1.1 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.3 0.7 GO:0010541 acropetal auxin transport(GO:0010541)
0.3 1.0 GO:0006620 posttranslational protein targeting to membrane(GO:0006620)
0.3 1.4 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.3 1.0 GO:0090058 metaxylem development(GO:0090058)
0.3 1.4 GO:0051418 interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)
0.3 2.0 GO:1904961 quiescent center organization(GO:1904961)
0.3 4.2 GO:0044030 regulation of DNA methylation(GO:0044030)
0.3 2.2 GO:0019264 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.3 0.9 GO:0010483 pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.3 2.8 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.3 0.9 GO:0034982 mitochondrial protein processing(GO:0034982)
0.3 1.5 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.3 0.9 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.3 1.8 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.3 2.1 GO:0015780 nucleotide-sugar transport(GO:0015780)
0.3 0.9 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.3 13.4 GO:0051085 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.3 4.1 GO:0015865 purine nucleotide transport(GO:0015865)
0.3 0.6 GO:0055064 chloride ion homeostasis(GO:0055064)
0.3 1.1 GO:0032889 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144)
0.3 2.0 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.3 1.7 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.3 0.8 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.3 0.8 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.3 1.1 GO:0042989 sequestering of actin monomers(GO:0042989)
0.3 1.1 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.3 1.3 GO:0043545 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.3 2.6 GO:0006308 DNA catabolic process(GO:0006308)
0.3 0.3 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
0.3 1.6 GO:0009650 UV protection(GO:0009650)
0.3 0.8 GO:0043181 cellular sodium ion homeostasis(GO:0006883) vacuolar sequestering(GO:0043181)
0.3 4.9 GO:0006949 syncytium formation(GO:0006949)
0.3 3.8 GO:0071329 cellular response to sucrose stimulus(GO:0071329)
0.3 0.8 GO:0009558 embryo sac cellularization(GO:0009558)
0.2 0.7 GO:0000730 DNA recombinase assembly(GO:0000730) strand invasion(GO:0042148)
0.2 5.3 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.2 6.4 GO:0048768 root hair cell tip growth(GO:0048768)
0.2 0.9 GO:0010042 response to manganese ion(GO:0010042)
0.2 1.2 GO:0072501 cyclic nucleotide biosynthetic process(GO:0009190) cellular monovalent inorganic anion homeostasis(GO:0030320) cyclic purine nucleotide metabolic process(GO:0052652) cellular divalent inorganic anion homeostasis(GO:0072501)
0.2 1.4 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.2 0.9 GO:0009557 antipodal cell differentiation(GO:0009557)
0.2 0.7 GO:0045835 regulation of reciprocal meiotic recombination(GO:0010520) negative regulation of meiotic nuclear division(GO:0045835) negative regulation of meiotic cell cycle(GO:0051447)
0.2 1.1 GO:0007035 vacuolar acidification(GO:0007035) intracellular pH reduction(GO:0051452)
0.2 3.1 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.2 1.1 GO:0043090 amino acid import(GO:0043090)
0.2 4.2 GO:0006730 one-carbon metabolic process(GO:0006730)
0.2 1.3 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.2 3.3 GO:0009098 leucine biosynthetic process(GO:0009098)
0.2 1.7 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.2 1.3 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.2 1.1 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.2 0.6 GO:0006102 isocitrate metabolic process(GO:0006102)
0.2 2.3 GO:0000304 response to singlet oxygen(GO:0000304)
0.2 1.5 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.2 1.4 GO:0015689 molybdate ion transport(GO:0015689)
0.2 0.6 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.2 0.6 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.2 4.7 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.2 0.8 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.2 1.8 GO:0046785 microtubule polymerization(GO:0046785)
0.2 1.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.2 2.7 GO:0015986 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.2 1.6 GO:0016045 detection of bacterium(GO:0016045)
0.2 1.2 GO:0046578 regulation of Ras protein signal transduction(GO:0046578) regulation of small GTPase mediated signal transduction(GO:0051056)
0.2 1.8 GO:0010358 leaf shaping(GO:0010358)
0.2 2.3 GO:0007004 RNA-dependent DNA biosynthetic process(GO:0006278) telomere maintenance via telomerase(GO:0007004)
0.2 0.4 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.2 0.3 GO:0072530 purine-containing compound transmembrane transport(GO:0072530)
0.2 9.7 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.2 2.2 GO:0005987 sucrose catabolic process(GO:0005987)
0.2 5.5 GO:0006334 nucleosome assembly(GO:0006334)
0.2 1.4 GO:0010508 positive regulation of autophagy(GO:0010508)
0.2 1.0 GO:0044774 mitotic DNA integrity checkpoint(GO:0044774)
0.2 1.3 GO:0080144 amino acid homeostasis(GO:0080144)
0.2 1.0 GO:0015846 polyamine transport(GO:0015846)
0.2 5.7 GO:0045492 xylan biosynthetic process(GO:0045492)
0.2 1.5 GO:0009819 drought recovery(GO:0009819)
0.2 1.0 GO:0090114 COPII-coated vesicle budding(GO:0090114)
0.2 1.1 GO:0051125 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.2 0.6 GO:0071480 cellular response to gamma radiation(GO:0071480)
0.2 3.1 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.2 2.2 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.2 9.3 GO:0030244 cellulose biosynthetic process(GO:0030244)
0.2 1.8 GO:0000076 DNA replication checkpoint(GO:0000076)
0.2 2.7 GO:0006085 acetyl-CoA biosynthetic process(GO:0006085)
0.1 1.5 GO:0051026 chiasma assembly(GO:0051026)
0.1 0.9 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.1 1.0 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 10.9 GO:0045454 cell redox homeostasis(GO:0045454)
0.1 1.3 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.1 2.0 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 0.7 GO:1904276 histone H3-K36 methylation(GO:0010452) regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.1 1.1 GO:0070828 heterochromatin organization(GO:0070828)
0.1 1.4 GO:0000913 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.1 1.0 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.1 2.5 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.1 1.1 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.4 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.1 0.7 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 0.8 GO:0010506 regulation of autophagy(GO:0010506)
0.1 0.3 GO:0017145 stem cell division(GO:0017145)
0.1 1.6 GO:0034063 stress granule assembly(GO:0034063)
0.1 0.6 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.1 2.4 GO:0052544 defense response by callose deposition in cell wall(GO:0052544)
0.1 0.6 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.1 1.6 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.1 1.2 GO:0033619 membrane protein proteolysis(GO:0033619)
0.1 5.0 GO:0016145 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 1.2 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.1 0.6 GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation(GO:0006616)
0.1 0.4 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.1 1.8 GO:0043248 proteasome assembly(GO:0043248)
0.1 0.5 GO:0006903 vesicle targeting(GO:0006903)
0.1 2.9 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.1 0.9 GO:0006491 N-glycan processing(GO:0006491)
0.1 1.6 GO:0006108 malate metabolic process(GO:0006108)
0.1 0.7 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.1 1.6 GO:0007093 mitotic cell cycle checkpoint(GO:0007093)
0.1 1.0 GO:0006771 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.1 6.3 GO:0002181 cytoplasmic translation(GO:0002181)
0.1 0.8 GO:0032456 endocytic recycling(GO:0032456)
0.1 1.3 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.1 1.7 GO:0009641 shade avoidance(GO:0009641)
0.1 1.8 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.1 0.3 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.1 2.2 GO:0010152 pollen maturation(GO:0010152)
0.1 3.4 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.1 0.2 GO:0080051 cutin transport(GO:0080051)
0.1 1.3 GO:0030071 regulation of mitotic metaphase/anaphase transition(GO:0030071) regulation of metaphase/anaphase transition of cell cycle(GO:1902099)
0.1 0.4 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 0.7 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.1 2.6 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.1 1.1 GO:0051814 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.1 0.5 GO:0048863 stem cell differentiation(GO:0048863)
0.1 1.0 GO:1905039 organic acid transmembrane transport(GO:1903825) carboxylic acid transmembrane transport(GO:1905039)
0.1 16.7 GO:0007017 microtubule-based process(GO:0007017)
0.1 2.0 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.1 1.4 GO:0048829 root cap development(GO:0048829)
0.1 2.3 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 0.5 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.1 0.8 GO:0018210 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.1 0.8 GO:0070301 cellular response to hydrogen peroxide(GO:0070301)
0.1 0.7 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.1 3.0 GO:0006888 ER to Golgi vesicle-mediated transport(GO:0006888)
0.1 0.3 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 0.5 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.1 0.8 GO:0070370 cellular heat acclimation(GO:0070370)
0.1 0.9 GO:0006465 signal peptide processing(GO:0006465)
0.1 1.2 GO:0009750 response to fructose(GO:0009750)
0.1 0.8 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 2.5 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.1 8.4 GO:0006869 lipid transport(GO:0006869)
0.1 0.2 GO:0030030 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.1 0.4 GO:0007030 Golgi organization(GO:0007030)
0.1 1.6 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.1 0.8 GO:2001289 lipid X metabolic process(GO:2001289)
0.1 1.1 GO:0032544 plastid translation(GO:0032544)
0.1 1.5 GO:0000911 cytokinesis by cell plate formation(GO:0000911)
0.1 1.6 GO:0090630 activation of GTPase activity(GO:0090630)
0.1 0.2 GO:0010351 lithium ion transport(GO:0010351)
0.1 0.3 GO:0006751 glutathione catabolic process(GO:0006751)
0.1 1.1 GO:0045824 negative regulation of innate immune response(GO:0045824)
0.1 0.5 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.1 1.1 GO:0031053 primary miRNA processing(GO:0031053)
0.1 1.5 GO:0008356 asymmetric cell division(GO:0008356)
0.1 6.4 GO:0072657 protein localization to membrane(GO:0072657)
0.1 1.0 GO:0052542 defense response by callose deposition(GO:0052542)
0.1 0.5 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.1 0.7 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.1 1.9 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.1 2.9 GO:0006413 translational initiation(GO:0006413)
0.1 1.2 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.1 0.7 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.1 2.1 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.1 2.1 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.1 1.5 GO:0010091 trichome branching(GO:0010091)
0.1 3.3 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.1 0.3 GO:0019405 alditol catabolic process(GO:0019405) glycerol catabolic process(GO:0019563)
0.1 0.9 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.1 1.0 GO:0048017 phosphatidylinositol-mediated signaling(GO:0048015) inositol lipid-mediated signaling(GO:0048017)
0.1 1.5 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.1 1.1 GO:1905037 autophagosome assembly(GO:0000045) autophagosome organization(GO:1905037)
0.1 0.3 GO:0006047 UDP-N-acetylglucosamine metabolic process(GO:0006047) UDP-N-acetylglucosamine biosynthetic process(GO:0006048) amino sugar biosynthetic process(GO:0046349)
0.1 0.7 GO:0098876 vesicle-mediated transport to the plasma membrane(GO:0098876)
0.1 4.4 GO:0006457 protein folding(GO:0006457)
0.1 0.8 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 0.7 GO:0033753 ribosomal subunit export from nucleus(GO:0000054) ribosome localization(GO:0033750) establishment of ribosome localization(GO:0033753) rRNA-containing ribonucleoprotein complex export from nucleus(GO:0071428)
0.1 0.8 GO:0006026 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.1 0.1 GO:0002683 negative regulation of immune system process(GO:0002683) negative regulation of immune response(GO:0050777)
0.1 2.0 GO:0009749 response to glucose(GO:0009749)
0.1 0.6 GO:0010822 positive regulation of mitochondrion organization(GO:0010822)
0.1 1.0 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 2.4 GO:0006342 chromatin silencing(GO:0006342)
0.0 2.0 GO:0006897 endocytosis(GO:0006897)
0.0 0.6 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.0 2.1 GO:0009853 photorespiration(GO:0009853)
0.0 0.8 GO:0009756 carbohydrate mediated signaling(GO:0009756) sugar mediated signaling pathway(GO:0010182)
0.0 6.2 GO:0009845 seed germination(GO:0009845)
0.0 1.0 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.0 0.5 GO:0080147 root hair cell development(GO:0080147)
0.0 2.2 GO:0006887 exocytosis(GO:0006887)
0.0 0.9 GO:0045927 positive regulation of growth(GO:0045927)
0.0 0.5 GO:0072598 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596) protein localization to chloroplast(GO:0072598)
0.0 1.3 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.8 GO:0007186 G-protein coupled receptor signaling pathway(GO:0007186)
0.0 0.5 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 1.1 GO:0006414 translational elongation(GO:0006414)
0.0 0.8 GO:0032508 DNA duplex unwinding(GO:0032508)
0.0 0.2 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.0 1.5 GO:0016128 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.0 0.7 GO:0000723 telomere maintenance(GO:0000723) telomere organization(GO:0032200)
0.0 0.7 GO:0001522 pseudouridine synthesis(GO:0001522)
0.0 5.5 GO:0016192 vesicle-mediated transport(GO:0016192)
0.0 0.8 GO:0030091 protein repair(GO:0030091)
0.0 2.0 GO:0006401 RNA catabolic process(GO:0006401)
0.0 0.7 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.0 0.1 GO:0009901 anther dehiscence(GO:0009901)
0.0 0.8 GO:0060548 negative regulation of cell death(GO:0060548)
0.0 0.3 GO:0010555 response to mannitol(GO:0010555)
0.0 2.4 GO:0071669 plant-type cell wall organization or biogenesis(GO:0071669)
0.0 0.2 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 2.3 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.3 GO:0007050 cell cycle arrest(GO:0007050)
0.0 0.3 GO:0010044 response to aluminum ion(GO:0010044)
0.0 1.4 GO:0042176 regulation of protein catabolic process(GO:0042176)
0.0 1.1 GO:0009696 salicylic acid metabolic process(GO:0009696)
0.0 0.7 GO:0000038 very long-chain fatty acid metabolic process(GO:0000038)
0.0 0.1 GO:0071276 phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.0 0.1 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.0 1.4 GO:0010101 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)
0.0 0.3 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.7 GO:0043666 regulation of phosphoprotein phosphatase activity(GO:0043666)
0.0 0.7 GO:0046839 phospholipid dephosphorylation(GO:0046839)
0.0 0.3 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 1.0 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.0 0.9 GO:0048767 root hair elongation(GO:0048767)
0.0 0.3 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.0 1.1 GO:0009813 flavonoid biosynthetic process(GO:0009813)
0.0 0.5 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.1 GO:1902065 response to L-glutamate(GO:1902065)
0.0 1.1 GO:0009615 response to virus(GO:0009615)
0.0 7.9 GO:0006412 translation(GO:0006412)
0.0 0.0 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.0 3.0 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 1.6 GO:0009741 response to brassinosteroid(GO:0009741)
0.0 1.5 GO:0012501 programmed cell death(GO:0012501)
0.0 0.7 GO:0000470 maturation of LSU-rRNA(GO:0000470)
0.0 0.5 GO:0032970 regulation of actin filament-based process(GO:0032970)
0.0 0.3 GO:0015770 sucrose transport(GO:0015770)
0.0 0.4 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.1 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.0 0.2 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.0 0.2 GO:0045491 xylan metabolic process(GO:0045491)
0.0 1.0 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.3 GO:0006757 glycolytic process(GO:0006096) ATP generation from ADP(GO:0006757) purine nucleoside diphosphate metabolic process(GO:0009135) purine ribonucleoside diphosphate metabolic process(GO:0009179) ADP metabolic process(GO:0046031)
0.0 0.5 GO:0000725 recombinational repair(GO:0000725)
0.0 0.5 GO:0006633 fatty acid biosynthetic process(GO:0006633)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 17.2 GO:0045298 tubulin complex(GO:0045298)
0.9 3.7 GO:0010330 cellulose synthase complex(GO:0010330)
0.9 5.4 GO:0030137 COPI-coated vesicle(GO:0030137)
0.8 5.0 GO:0009346 citrate lyase complex(GO:0009346)
0.8 7.4 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.8 3.1 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.6 1.7 GO:0005712 chiasma(GO:0005712)
0.6 4.5 GO:0005784 Sec61 translocon complex(GO:0005784)
0.5 1.0 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.4 1.3 GO:0030874 nucleolar chromatin(GO:0030874)
0.4 3.5 GO:0030127 COPII vesicle coat(GO:0030127)
0.4 38.3 GO:0000138 Golgi trans cisterna(GO:0000138)
0.4 3.9 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.4 2.9 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.4 16.2 GO:0009504 cell plate(GO:0009504)
0.4 1.1 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.4 2.6 GO:0016363 nuclear matrix(GO:0016363)
0.4 2.1 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.3 1.0 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.3 1.0 GO:0000814 ESCRT II complex(GO:0000814)
0.3 1.0 GO:1990298 bub1-bub3 complex(GO:1990298)
0.3 1.2 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.3 2.7 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.3 3.0 GO:0016272 prefoldin complex(GO:0016272)
0.3 1.4 GO:0001673 male germ cell nucleus(GO:0001673)
0.3 1.1 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.3 3.3 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.3 2.2 GO:0035619 root hair tip(GO:0035619)
0.3 3.0 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.3 1.6 GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain(GO:0033178)
0.3 0.5 GO:0017119 Golgi transport complex(GO:0017119)
0.3 0.8 GO:0031902 late endosome membrane(GO:0031902)
0.3 2.3 GO:0005662 DNA replication factor A complex(GO:0005662)
0.3 7.9 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.3 1.0 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.3 12.4 GO:0005795 Golgi stack(GO:0005795)
0.2 13.7 GO:0005797 Golgi medial cisterna(GO:0005797)
0.2 1.2 GO:0009897 external side of plasma membrane(GO:0009897)
0.2 2.6 GO:0031519 PcG protein complex(GO:0031519)
0.2 3.3 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.2 2.3 GO:0072546 ER membrane protein complex(GO:0072546)
0.2 1.6 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.2 0.7 GO:0032301 MutSalpha complex(GO:0032301)
0.2 1.8 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.2 2.9 GO:0045239 tricarboxylic acid cycle enzyme complex(GO:0045239)
0.2 3.6 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.2 4.5 GO:0030136 clathrin-coated vesicle(GO:0030136)
0.2 1.6 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.2 1.2 GO:0070652 HAUS complex(GO:0070652)
0.2 1.2 GO:0030660 Golgi-associated vesicle membrane(GO:0030660)
0.2 1.1 GO:0005845 mRNA cap binding complex(GO:0005845)
0.2 4.2 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.2 1.7 GO:0042555 MCM complex(GO:0042555)
0.2 4.0 GO:0005871 kinesin complex(GO:0005871)
0.2 3.0 GO:0048475 membrane coat(GO:0030117) coated membrane(GO:0048475)
0.2 0.6 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.2 0.9 GO:0035145 exon-exon junction complex(GO:0035145)
0.2 2.0 GO:0005769 early endosome(GO:0005769)
0.1 1.2 GO:0000813 ESCRT I complex(GO:0000813)
0.1 6.1 GO:0000139 Golgi membrane(GO:0000139)
0.1 0.9 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 1.4 GO:0031209 SCAR complex(GO:0031209)
0.1 1.9 GO:0045281 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.1 2.7 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 3.6 GO:0005680 anaphase-promoting complex(GO:0005680)
0.1 0.9 GO:0005787 signal peptidase complex(GO:0005787)
0.1 1.4 GO:0071007 U2-type catalytic step 2 spliceosome(GO:0071007)
0.1 61.8 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.1 0.9 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.1 2.9 GO:0009574 preprophase band(GO:0009574)
0.1 1.1 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 1.1 GO:0010445 nuclear dicing body(GO:0010445)
0.1 0.7 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.1 3.8 GO:0000145 exocyst(GO:0000145)
0.1 0.3 GO:0034703 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.1 14.0 GO:0098791 Golgi subcompartment(GO:0098791)
0.1 0.6 GO:0000314 organellar small ribosomal subunit(GO:0000314)
0.1 23.6 GO:0048046 apoplast(GO:0048046)
0.1 0.7 GO:0098554 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.1 1.6 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.1 0.7 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 8.8 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.1 1.0 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.1 1.1 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.1 1.6 GO:0030981 cortical microtubule cytoskeleton(GO:0030981)
0.1 1.1 GO:0000786 nucleosome(GO:0000786)
0.1 0.3 GO:0000839 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.1 54.0 GO:0005794 Golgi apparatus(GO:0005794)
0.1 0.9 GO:0098800 inner mitochondrial membrane protein complex(GO:0098800)
0.1 9.9 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 1.5 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.1 0.8 GO:0005839 proteasome core complex(GO:0005839)
0.1 1.1 GO:0000792 heterochromatin(GO:0000792)
0.1 5.6 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 0.3 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 6.8 GO:0000790 nuclear chromatin(GO:0000790)
0.1 3.5 GO:0070469 respiratory chain(GO:0070469)
0.1 0.4 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.1 6.7 GO:0031225 anchored component of membrane(GO:0031225)
0.1 1.1 GO:0000325 plant-type vacuole(GO:0000325)
0.1 0.8 GO:0009524 phragmoplast(GO:0009524)
0.1 9.3 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.1 0.3 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.1 0.6 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 1.2 GO:0000502 proteasome complex(GO:0000502)
0.0 2.4 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 20.3 GO:0005911 cell-cell junction(GO:0005911) plasmodesma(GO:0009506) cell junction(GO:0030054) symplast(GO:0055044)
0.0 0.9 GO:0005764 lysosome(GO:0005764)
0.0 1.5 GO:0005874 microtubule(GO:0005874)
0.0 2.2 GO:0005615 extracellular space(GO:0005615)
0.0 0.8 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 0.7 GO:0031201 SNARE complex(GO:0031201)
0.0 0.7 GO:0030686 90S preribosome(GO:0030686)
0.0 2.6 GO:0005759 mitochondrial matrix(GO:0005759)
0.0 1.3 GO:0090406 pollen tube(GO:0090406)
0.0 0.7 GO:0000794 condensed nuclear chromosome(GO:0000794)
0.0 1.5 GO:0015629 actin cytoskeleton(GO:0015629)
0.0 0.6 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 56.4 GO:0005829 cytosol(GO:0005829)
0.0 4.1 GO:0016021 integral component of membrane(GO:0016021)
0.0 4.0 GO:0005774 vacuolar membrane(GO:0005774)
0.0 0.1 GO:0005771 multivesicular body(GO:0005771)
0.0 27.0 GO:0071944 cell periphery(GO:0071944)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.6 13.1 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
1.6 4.7 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
1.5 7.6 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
1.4 4.2 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
1.4 4.1 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
1.1 6.6 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
1.1 4.4 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
1.0 5.1 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.9 8.3 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.9 3.5 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.8 5.0 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.8 3.1 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.7 2.6 GO:0004385 guanylate kinase activity(GO:0004385)
0.6 2.5 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.6 8.2 GO:0002020 protease binding(GO:0002020)
0.6 1.9 GO:0061731 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.6 3.1 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.6 20.4 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.6 1.8 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.6 2.4 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457)
0.6 2.9 GO:0004333 fumarate hydratase activity(GO:0004333)
0.6 2.2 GO:0070182 DNA polymerase binding(GO:0070182)
0.5 3.3 GO:0030544 Hsp70 protein binding(GO:0030544)
0.5 6.0 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.5 3.2 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.5 1.6 GO:0045430 chalcone isomerase activity(GO:0045430)
0.5 3.5 GO:0031177 phosphopantetheine binding(GO:0031177)
0.5 1.0 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.5 2.4 GO:0004001 adenosine kinase activity(GO:0004001)
0.5 1.9 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.5 1.4 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.4 2.2 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.4 2.2 GO:0003785 actin monomer binding(GO:0003785)
0.4 3.1 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.4 2.1 GO:0008705 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.4 1.3 GO:0052725 inositol-1,4,5-trisphosphate 6-kinase activity(GO:0000823) inositol tetrakisphosphate 3-kinase activity(GO:0000824) inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440) inositol tetrakisphosphate 5-kinase activity(GO:0047326) inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.4 1.3 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.4 4.1 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.4 3.3 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.4 1.2 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.4 1.5 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.4 1.1 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.4 1.5 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.4 2.6 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.4 4.8 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.4 1.8 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.4 2.1 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.4 1.8 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.4 3.6 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.3 2.1 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.3 6.5 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.3 1.7 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.3 2.6 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.3 1.3 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.3 3.0 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.3 1.0 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.3 2.2 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.3 0.9 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.3 1.2 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.3 1.1 GO:0033862 UMP kinase activity(GO:0033862)
0.3 2.8 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.3 1.1 GO:0009885 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.3 1.7 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.3 1.9 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.3 1.9 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.3 1.1 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.3 0.5 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.3 8.3 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.3 2.8 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.2 1.2 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.2 5.8 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.2 1.0 GO:0003935 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.2 2.9 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.2 2.3 GO:0098847 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.2 0.9 GO:0004839 ubiquitin activating enzyme activity(GO:0004839)
0.2 1.8 GO:0010011 auxin binding(GO:0010011)
0.2 0.7 GO:0032405 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.2 1.1 GO:0003680 AT DNA binding(GO:0003680)
0.2 2.0 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.2 1.7 GO:0043142 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.2 1.7 GO:0051011 microtubule minus-end binding(GO:0051011)
0.2 1.1 GO:0070139 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.2 3.4 GO:0016018 cyclosporin A binding(GO:0016018)
0.2 0.6 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.2 1.4 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.2 6.0 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.2 5.1 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.2 5.6 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.2 1.0 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.2 0.6 GO:0015296 anion:cation symporter activity(GO:0015296)
0.2 1.5 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.2 1.1 GO:0019904 protein domain specific binding(GO:0019904)
0.2 3.2 GO:0003746 translation elongation factor activity(GO:0003746)
0.2 2.2 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.2 1.8 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.2 1.6 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.2 2.5 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.2 1.4 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.2 1.5 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.2 1.2 GO:0000036 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process(GO:0000036) ACP phosphopantetheine attachment site binding(GO:0044620) prosthetic group binding(GO:0051192)
0.2 0.5 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.2 0.8 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.2 0.5 GO:0030941 chloroplast targeting sequence binding(GO:0030941)
0.2 1.1 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.2 1.4 GO:0004017 adenylate kinase activity(GO:0004017)
0.2 1.1 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.2 0.9 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.2 0.9 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.1 7.8 GO:0008320 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.1 0.7 GO:0000150 recombinase activity(GO:0000150)
0.1 5.1 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 3.6 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.1 2.6 GO:0030276 clathrin binding(GO:0030276)
0.1 1.9 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 2.0 GO:0030674 protein binding, bridging(GO:0030674)
0.1 1.2 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.1 0.9 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.1 1.5 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 1.5 GO:0005496 steroid binding(GO:0005496)
0.1 1.2 GO:0046923 ER retention sequence binding(GO:0046923)
0.1 1.3 GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863)
0.1 1.7 GO:0019210 kinase inhibitor activity(GO:0019210)
0.1 1.8 GO:0016759 cellulose synthase activity(GO:0016759)
0.1 0.6 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.1 3.3 GO:0008810 cellulase activity(GO:0008810)
0.1 1.7 GO:0004743 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 1.6 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 0.9 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.1 5.9 GO:0008094 DNA-dependent ATPase activity(GO:0008094)
0.1 0.7 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.1 8.4 GO:0051082 unfolded protein binding(GO:0051082)
0.1 7.6 GO:0003777 microtubule motor activity(GO:0003777)
0.1 1.3 GO:0008641 small protein activating enzyme activity(GO:0008641)
0.1 33.4 GO:0005198 structural molecule activity(GO:0005198)
0.1 1.3 GO:0046556 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 5.3 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 1.0 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.1 0.3 GO:0042392 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.1 2.1 GO:0031072 heat shock protein binding(GO:0031072)
0.1 0.7 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 7.9 GO:0003724 RNA helicase activity(GO:0003724)
0.1 0.9 GO:0016849 phosphorus-oxygen lyase activity(GO:0016849)
0.1 1.3 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.1 0.9 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1 0.5 GO:0048487 beta-tubulin binding(GO:0048487)
0.1 1.4 GO:0035064 methylated histone binding(GO:0035064)
0.1 2.1 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 5.6 GO:0008017 microtubule binding(GO:0008017)
0.1 1.4 GO:0052745 inositol phosphate phosphatase activity(GO:0052745)
0.1 1.3 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.1 1.4 GO:0008417 fucosyltransferase activity(GO:0008417)
0.1 10.2 GO:0046982 protein heterodimerization activity(GO:0046982)
0.1 0.4 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.1 1.5 GO:0019902 phosphatase binding(GO:0019902)
0.1 1.0 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.1 0.5 GO:0032036 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.1 0.4 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.1 0.9 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.1 0.8 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 0.9 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.1 0.3 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.1 0.9 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 0.7 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 8.2 GO:0032561 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.1 0.9 GO:0005351 sugar:proton symporter activity(GO:0005351) cation:sugar symporter activity(GO:0005402)
0.1 2.0 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.1 0.5 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.1 2.8 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.1 1.2 GO:0008536 Ran GTPase binding(GO:0008536)
0.1 11.3 GO:0004721 phosphoprotein phosphatase activity(GO:0004721)
0.1 0.6 GO:0005484 SNAP receptor activity(GO:0005484)
0.1 14.9 GO:0005509 calcium ion binding(GO:0005509)
0.1 0.5 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.1 0.8 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 1.1 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.1 1.1 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 0.4 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.1 2.0 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.1 1.3 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553) hydrogen-exporting ATPase activity(GO:0036442)
0.1 0.8 GO:0019905 syntaxin binding(GO:0019905)
0.1 1.1 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 2.4 GO:0017137 Rab GTPase binding(GO:0017137)
0.1 2.5 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 1.0 GO:0016407 acetyltransferase activity(GO:0016407)
0.0 0.9 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.0 1.8 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.7 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 1.1 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 2.2 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 2.9 GO:0005337 nucleoside transmembrane transporter activity(GO:0005337)
0.0 0.8 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 2.2 GO:0000149 SNARE binding(GO:0000149)
0.0 1.7 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.0 0.3 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
0.0 19.2 GO:0016757 transferase activity, transferring glycosyl groups(GO:0016757)
0.0 2.4 GO:0043130 ubiquitin binding(GO:0043130)
0.0 1.3 GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives(GO:0016857)
0.0 0.3 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 0.8 GO:0003684 damaged DNA binding(GO:0003684)
0.0 3.0 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 0.4 GO:0034594 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485) phosphatidylinositol trisphosphate phosphatase activity(GO:0034594)
0.0 0.8 GO:0008143 poly(A) binding(GO:0008143)
0.0 2.3 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.0 0.8 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.0 0.8 GO:0004568 chitinase activity(GO:0004568)
0.0 1.5 GO:0005319 lipid transporter activity(GO:0005319)
0.0 0.2 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 0.1 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.7 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.1 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.0 1.4 GO:0019900 kinase binding(GO:0019900)
0.0 0.8 GO:0003697 single-stranded DNA binding(GO:0003697)
0.0 2.0 GO:0051015 actin filament binding(GO:0051015)
0.0 0.3 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 2.3 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.9 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 1.3 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 3.4 GO:0008168 methyltransferase activity(GO:0008168)
0.0 3.1 GO:0005507 copper ion binding(GO:0005507)
0.0 0.6 GO:0008514 organic anion transmembrane transporter activity(GO:0008514)
0.0 0.9 GO:0016836 hydro-lyase activity(GO:0016836)
0.0 1.3 GO:0016410 N-acyltransferase activity(GO:0016410)
0.0 0.3 GO:0036002 pre-mRNA binding(GO:0036002)
0.0 3.2 GO:0016887 ATPase activity(GO:0016887)
0.0 1.0 GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides(GO:0016811)
0.0 6.6 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 0.5 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.0 0.1 GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity(GO:0016756)
0.0 0.1 GO:0035198 miRNA binding(GO:0035198)
0.0 0.6 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.5 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.2 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 0.3 GO:0033293 monocarboxylic acid binding(GO:0033293)
0.0 0.4 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 1.8 GO:0043531 ADP binding(GO:0043531)
0.0 6.6 GO:0044822 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.9 PID MTOR 4PATHWAY mTOR signaling pathway
0.4 1.2 SIG CHEMOTAXIS Genes related to chemotaxis
0.4 2.2 PID PLK1 PATHWAY PLK1 signaling events
0.3 0.3 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.3 0.8 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.2 1.2 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.2 0.9 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.1 0.3 PID INTEGRIN1 PATHWAY Beta1 integrin cell surface interactions
0.1 0.7 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.1 0.2 PID ARF 3PATHWAY Arf1 pathway
0.1 0.5 PID CXCR4 PATHWAY CXCR4-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 2.9 REACTOME DEADENYLATION OF MRNA Genes involved in Deadenylation of mRNA
0.6 1.7 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.6 2.2 REACTOME LIPOPROTEIN METABOLISM Genes involved in Lipoprotein metabolism
0.5 1.0 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.5 1.4 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.4 1.8 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.4 1.7 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.4 1.5 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.3 0.9 REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION Genes involved in Cyclin E associated events during G1/S transition
0.3 0.3 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.2 1.7 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.2 0.9 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.2 1.2 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.2 0.7 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.2 1.2 REACTOME MEMBRANE TRAFFICKING Genes involved in Membrane Trafficking
0.2 3.8 REACTOME PEPTIDE CHAIN ELONGATION Genes involved in Peptide chain elongation
0.1 0.7 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.1 0.9 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.1 0.7 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination
0.0 0.3 REACTOME SIGNALING BY PDGF Genes involved in Signaling by PDGF