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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G06850

Z-value: 1.36

Transcription factors associated with AT1G06850

Gene Symbol Gene ID Gene Info
AT1G06850
AT1G06850 basic leucine-zipper 52

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
bZIP52arTal_v1_Chr1_+_2105048_21050550.554.0e-02Click!

Activity profile of AT1G06850 motif

Sorted Z-values of AT1G06850 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_7401951 2.05 AT4G12470.1
AZI1
azelaic acid induced 1
Chr5_+_21240717 1.65 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
Chr2_-_12343443 1.60 AT2G28780.1
AT2G28780
P-hydroxybenzoic acid efflux pump subunit
Chr1_+_28498821 1.58 AT1G75900.1
AT1G75900
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_9275193 1.56 AT1G26790.1
AT1G26790
Dof-type zinc finger DNA-binding family protein
Chr4_+_9028262 1.51 AT4G15910.1
DI21
drought-induced 21
Chr5_-_19648362 1.38 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_18189523 1.28 AT5G45070.1
PP2-A8
phloem protein 2-A8
Chr1_-_28442429 1.26 AT1G75750.2
AT1G75750.1
GASA1
GAST1 protein homolog 1
Chr3_+_18940643 1.22 AT3G50970.1
LTI30
dehydrin family protein
Chr1_-_698591 1.19 AT1G03020.1
AT1G03020
Thioredoxin superfamily protein
Chr2_+_7964326 1.16 AT2G18328.1
RL4
RAD-like 4
Chr1_-_37757 1.15 AT1G01060.3
AT1G01060.2
AT1G01060.4
AT1G01060.1
AT1G01060.6
AT1G01060.7
AT1G01060.5
LHY
Homeodomain-like superfamily protein
Chr3_-_20816035 1.15 AT3G56090.1
FER3
ferritin 3
Chr1_+_3093644 1.14 AT1G09560.1
GLP5
germin-like protein 5
Chr5_-_6976036 1.14 AT5G20630.1
GER3
germin 3
Chr5_+_22721373 1.14 AT5G56120.1
AT5G56120
RNA polymerase II elongation factor
Chr5_-_8406132 1.10 AT5G24570.1
AT5G24575.1
AT5G24570
AT5G24575
hypothetical protein
hypothetical protein
Chr3_-_23046153 1.09 AT3G62270.1
AT3G62270
HCO3- transporter family
Chr5_+_18791575 1.05 AT5G46330.1
AT5G46330.2
FLS2
Leucine-rich receptor-like protein kinase family protein
Chr5_-_20489727 1.03 AT5G50335.1
AT5G50335
hypothetical protein
Chr2_-_827994 1.02 AT2G02850.1
ARPN
plantacyanin
Chr2_-_5675995 1.02 AT2G13610.1
ABCG5
ABC-2 type transporter family protein
Chr3_+_2441565 1.00 AT3G07650.4
AT3G07650.1
AT3G07650.3
AT3G07650.2
COL9
CONSTANS-like 9
Chr1_+_16263805 0.97 AT1G43160.1
RAP2.6
related to AP2 6
Chr3_+_20991280 0.97 AT3G56680.1
AT3G56680
Single-stranded nucleic acid binding R3H protein
Chr3_-_565801 0.97 AT3G02640.1
AT3G02640
transmembrane protein
Chr5_-_4620551 0.93 AT5G14330.1
AT5G14330
transmembrane protein
Chr3_-_2825114 0.93 AT3G09200.2
AT3G09200.1
AT3G09200
Ribosomal protein L10 family protein
Chr5_-_15201168 0.92 AT5G38100.4
AT5G38100.1
AT5G38100.2
AT5G38100
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_+_2563366 0.91 AT5G08000.1
AT5G08000.2
E13L3
glucan endo-1,3-beta-glucosidase-like protein 3
Chr5_+_17951442 0.91 AT5G44565.2
AT5G44565.1
AT5G44565.3
AT5G44565
transmembrane protein
Chr5_+_23701392 0.90 AT5G58660.1
AT5G58660.2
AT5G58660
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_-_12400231 0.90 AT4G23820.1
AT4G23820
Pectin lyase-like superfamily protein
Chr2_+_2763449 0.90 AT2G06850.1
AT2G06850.2
XTH4
xyloglucan endotransglucosylase/hydrolase 4
Chr1_-_2392500 0.89 AT1G07720.1
AT1G07720.2
KCS3
3-ketoacyl-CoA synthase 3
Chr1_+_7785708 0.88 AT1G22065.1
AT1G22065
hypothetical protein
Chr1_-_11719988 0.88 AT1G32450.1
NRT1.5
nitrate transporter 1.5
Chr1_-_4398193 0.88 AT1G12920.1
ERF1-2
eukaryotic release factor 1-2
Chr5_+_6687030 0.86 AT5G19780.1
TUA5
tubulin alpha-5
Chr5_-_26816761 0.85 AT5G67200.1
AT5G67200
Leucine-rich repeat protein kinase family protein
Chr4_+_9257869 0.84 AT4G16390.1
SVR7
pentatricopeptide (PPR) repeat-containing protein
Chr1_-_10473502 0.83 AT1G29910.1
CAB3
chlorophyll A/B binding protein 3
Chr4_-_7414955 0.83 AT4G12500.1
AT4G12500
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_22417244 0.82 AT1G60890.2
AT1G60890.1
AT1G60890
Phosphatidylinositol-4-phosphate 5-kinase family protein
Chr5_+_3157694 0.82 AT5G10100.1
AT5G10100.3
AT5G10100.4
TPPI
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_14868758 0.82 AT5G37475.2
AT5G37475.1
AT5G37475.3
AT5G37475
Translation initiation factor eIF3 subunit
Chr4_+_1249971 0.82 AT4G02800.1
AT4G02800
GRIP/coiled-coil protein
Chr3_+_8550037 0.81 AT3G23730.1
XTH16
xyloglucan endotransglucosylase/hydrolase 16
Chr3_-_1970946 0.81 AT3G06435.2
AT3G06435
Expressed protein
Chr1_-_10399873 0.81 AT1G29720.1
AT1G29720
Leucine-rich repeat transmembrane protein kinase
Chr5_-_5137707 0.80 AT5G15740.1
AT5G15740
O-fucosyltransferase family protein
Chr1_-_5789312 0.80 AT1G16920.1
RABA1b
RAB GTPase homolog A1B
Chr5_+_14273535 0.80 AT5G36230.2
AT5G36230
ARM repeat superfamily protein
Chr3_+_18249663 0.80 AT3G49220.2
AT3G49220.3
AT3G49220.1
AT3G49220
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_+_10759724 0.79 AT2G25270.1
AT2G25270
transmembrane protein
Chr5_+_22388782 0.78 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr3_-_6212551 0.78 AT3G18130.1
RACK1C_AT
receptor for activated C kinase 1C
Chr5_+_14273345 0.78 AT5G36230.1
AT5G36230
ARM repeat superfamily protein
Chr1_-_28094915 0.78 AT1G74770.2
AT1G74770.1
AT1G74770
zinc ion binding protein
Chr4_+_11663186 0.77 AT4G22010.1
sks4
SKU5 similar 4
Chr3_+_4403355 0.77 AT3G13510.1
AT3G13510
carboxyl-terminal peptidase, putative (DUF239)
Chr5_+_15878698 0.77 AT5G39660.1
AT5G39660.3
AT5G39660.2
CDF2
cycling DOF factor 2
Chr3_-_1970784 0.77 AT3G06435.1
AT3G06435
Expressed protein
Chr3_+_17512816 0.77 AT3G47520.1
MDH
malate dehydrogenase
Chr5_+_4768263 0.77 AT5G14760.1
AO
L-aspartate oxidase
Chr5_+_3111945 0.76 AT5G09970.1
CYP78A7
cytochrome P450, family 78, subfamily A, polypeptide 7
Chr2_+_6950041 0.75 AT2G15970.2
COR413-PM1
cold regulated 413 plasma membrane 1
Chr2_+_6949851 0.75 AT2G15970.1
COR413-PM1
cold regulated 413 plasma membrane 1
Chr1_+_18416474 0.75 AT1G49760.2
AT1G49760.1
PAB8
poly(A) binding protein 8
Chr1_-_6940832 0.75 AT1G20010.1
TUB5
tubulin beta-5 chain
Chr5_+_7014662 0.75 AT5G20720.1
AT5G20720.4
AT5G20720.2
AT5G20720.3
CPN20
chaperonin 20
Chr5_-_14623093 0.75 AT5G37010.1
AT5G37010
rho GTPase-activating protein
Chr5_+_22388521 0.75 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr5_-_25813620 0.75 AT5G64570.3
AT5G64570.2
AT5G64570.1
XYL4
beta-D-xylosidase 4
Chr5_-_22944970 0.74 AT5G56710.2
AT5G56710.1
AT5G56710
Ribosomal protein L31e family protein
Chr3_-_20629295 0.74 AT3G55610.1
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
Chr5_+_18444607 0.74 AT5G45510.2
AT5G45510.1
AT5G45510
Leucine-rich repeat (LRR) family protein
Chr2_-_7496292 0.74 AT2G17230.1
EXL5
EXORDIUM like 5
Chr1_+_29354944 0.74 AT1G78070.1
AT1G78070
Transducin/WD40 repeat-like superfamily protein
Chr2_-_784880 0.73 AT2G02780.3
AT2G02780.1
AT2G02780.2
AT2G02780
Leucine-rich repeat protein kinase family protein
Chr1_+_28756521 0.73 AT1G76620.1
AT1G76620.2
AT1G76620
Serine/Threonine-kinase, putative (Protein of unknown function, DUF547)
Chr2_-_17827648 0.73 AT2G42840.1
PDF1
protodermal factor 1
Chr5_-_24559879 0.73 AT5G61020.2
AT5G61020.1
ECT3
evolutionarily conserved C-terminal region 3
Chr5_+_26671273 0.73 AT5G66800.1
AT5G66800
membrane-associated kinase regulator-like protein
Chr2_-_19361328 0.72 AT2G47160.1
BOR1
HCO3- transporter family
Chr3_+_19825267 0.72 AT3G53480.1
ABCG37
pleiotropic drug resistance 9
Chr2_-_19361162 0.72 AT2G47160.2
BOR1
HCO3- transporter family
Chr5_+_1536057 0.72 AT5G05180.2
AT5G05180.1
AT5G05180.3
AT5G05180
myosin heavy chain, striated protein
Chr3_-_20629093 0.72 AT3G55610.2
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
Chr4_-_17123855 0.72 AT4G36180.1
AT4G36180
Leucine-rich receptor-like protein kinase family protein
Chr3_+_9848628 0.71 AT3G26780.1
MEF14
Phosphoglycerate mutase family protein
Chr4_-_2992618 0.71 AT4G05631.1
AT4G05631
hypothetical protein
Chr3_+_2167730 0.70 AT3G06868.1
AT3G06868
vitellogenin-like protein
Chr5_-_6684744 0.70 AT5G19770.1
TUA3
tubulin alpha-3
Chr5_+_18945543 0.70 AT5G46690.2
AT5G46690.1
bHLH071
beta HLH protein 71
Chr1_+_23527570 0.70 AT1G63440.1
HMA5
heavy metal atpase 5
Chr1_-_1375742 0.70 AT1G04870.1
AT1G04870.2
PRMT10
protein arginine methyltransferase 10
Chr5_+_19736540 0.69 AT5G48660.1
AT5G48660.2
AT5G48660
B-cell receptor-associated protein 31-like protein
Chr3_+_18534450 0.69 AT3G50000.1
CKA2
casein kinase II, alpha chain 2
Chr3_-_4974521 0.69 AT3G14810.1
AT3G14810.2
MSL5
mechanosensitive channel of small conductance-like 5
Chr4_-_8095749 0.69 AT4G14020.1
AT4G14020
Rapid alkalinization factor (RALF) family protein
Chr1_+_116784 0.69 AT1G01300.1
AT1G01300
Eukaryotic aspartyl protease family protein
Chr5_+_23693259 0.68 AT5G58620.1
AT5G58620
zinc finger (CCCH-type) family protein
Chr5_-_4639835 0.68 AT5G14390.1
AT5G14390
alpha/beta-Hydrolases superfamily protein
Chr1_-_29005281 0.68 AT1G77200.1
AT1G77200
Integrase-type DNA-binding superfamily protein
Chr3_+_6154363 0.68 AT3G18000.1
XPL1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_+_15208358 0.67 AT5G38110.1
ASF1B
anti- silencing function 1b
Chr4_+_1292483 0.66 AT4G02920.1
AT4G02920.2
AT4G02920
hypothetical protein
Chr3_+_10911132 0.66 AT3G28910.1
AT3G28910.2
MYB30
myb domain protein 30
Chr2_-_12646057 0.66 AT2G29550.1
TUB7
tubulin beta-7 chain
Chr1_+_29356346 0.66 AT1G78070.2
AT1G78070.3
AT1G78070
Transducin/WD40 repeat-like superfamily protein
Chr5_+_22492892 0.66 AT5G55530.2
AT5G55530.1
AT5G55530
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr5_-_22906764 0.66 AT5G56580.1
MKK6
MAP kinase kinase 6
Chr5_-_19328940 0.66 AT5G47700.2
AT5G47700.1
AT5G47700
60S acidic ribosomal protein family
Chr1_+_338241 0.66 AT1G01970.1
AT1G01970
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_4408925 0.65 AT3G13520.1
AGP12
arabinogalactan protein 12
Chr4_+_12660687 0.65 AT4G24510.1
CER2
HXXXD-type acyl-transferase family protein
Chr5_-_17755742 0.65 AT5G44110.2
AT5G44110.4
AT5G44110.3
AT5G44110.1
ABCI21
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_-_8088302 0.65 AT2G18650.1
MEE16
RING/U-box superfamily protein
Chr5_-_2665826 0.64 AT5G08280.1
HEMC
hydroxymethylbilane synthase
Chr1_+_22444307 0.64 AT1G60950.1
FED A
2Fe-2S ferredoxin-like superfamily protein
Chr4_+_4886962 0.64 AT4G08040.1
ACS11
1-aminocyclopropane-1-carboxylate synthase 11
Chr5_+_18530834 0.64 AT5G45680.1
FKBP13
FK506-binding protein 13
Chr1_-_1307973 0.63 AT1G04680.1
AT1G04680
Pectin lyase-like superfamily protein
Chr4_+_8571816 0.63 AT4G15000.1
AT4G15000.2
AT4G15000
Ribosomal L27e protein family
Chr4_+_15819489 0.63 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr3_+_5116021 0.63 AT3G15190.1
PRPS20
chloroplast 30S ribosomal protein S20
Chr4_-_15394626 0.63 AT4G31820.1
AT4G31820.2
ENP
Phototropic-responsive NPH3 family protein
Chr5_-_7111352 0.63 AT5G20950.2
AT5G20950.1
AT5G20950.3
AT5G20950
Glycosyl hydrolase family protein
Chr3_+_5720941 0.63 AT3G16800.5
AT3G16800.4
AT3G16800.2
AT3G16800.6
AT3G16800.1
AT3G16800
Protein phosphatase 2C family protein
Chr2_-_13012043 0.63 AT2G30540.1
AT2G30540
Thioredoxin superfamily protein
Chr3_+_21944170 0.63 AT3G59380.1
FTA
farnesyltransferase A
Chr1_-_28407182 0.62 AT1G75640.1
AT1G75640
Leucine-rich receptor-like protein kinase family protein
Chr2_-_13081418 0.62 AT2G30695.3
AT2G30695.2
AT2G30695.4
AT2G30695.1
AT2G30695
bacterial trigger factor
Chr3_+_22973564 0.61 AT3G62030.3
AT3G62030.1
ROC4
rotamase CYP 4
Chr3_-_11269228 0.61 AT3G29360.2
AT3G29360.1
UGD2
UDP-glucose 6-dehydrogenase family protein
Chr5_+_22493103 0.60 AT5G55530.3
AT5G55530
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr2_-_14390317 0.60 AT2G34070.1
AT2G34070.2
TBL37
TRICHOME BIREFRINGENCE-LIKE 37
Chr1_+_23730106 0.60 AT1G63940.4
AT1G63940.3
MDAR6
monodehydroascorbate reductase 6
Chr1_+_20614573 0.60 AT1G55260.1
AT1G55260.2
AT1G55260
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_8436436 0.60 AT3G23530.1
AT3G23530
Cyclopropane-fatty-acyl-phospholipid synthase
Chr1_+_23729875 0.60 AT1G63940.2
AT1G63940.1
MDAR6
monodehydroascorbate reductase 6
Chr3_+_22973004 0.60 AT3G62030.2
ROC4
rotamase CYP 4
Chr1_-_6904155 0.59 AT1G19880.1
AT1G19880
Regulator of chromosome condensation (RCC1) family protein
Chr3_-_19063538 0.59 AT3G51350.1
AT3G51350
Eukaryotic aspartyl protease family protein
Chr3_-_4231408 0.59 AT3G13160.1
AT3G13160
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_247192 0.59 AT3G01670.2
AT3G01670.1
SEOa
sieve element occlusion protein
Chr3_-_1526166 0.59 AT3G05340.1
AT3G05340
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_+_5648636 0.59 AT1G16520.1
AT1G16520
interactor of constitutive active ROPs protein
Chr1_-_6754073 0.59 AT1G19490.1
AT1G19490
Basic-leucine zipper (bZIP) transcription factor family protein
Chr1_-_23716170 0.59 AT1G63880.2
AT1G63880.1
AT1G63880
Disease resistance protein (TIR-NBS-LRR class) family
Chr2_+_17513008 0.59 AT2G41950.1
AT2G41950
DNA-directed RNA polymerase subunit beta
Chr3_+_415389 0.58 AT3G02230.1
RGP1
reversibly glycosylated polypeptide 1
Chr4_+_16881336 0.58 AT4G35560.1
AT4G35560.2
DAW1
Transducin/WD40 repeat-like superfamily protein
Chr5_-_18021508 0.58 AT5G44670.1
GALS2
glycosyltransferase family protein (DUF23)
Chr5_-_18899646 0.58 AT5G46580.1
AT5G46580
pentatricopeptide (PPR) repeat-containing protein
Chr5_+_5223934 0.58 AT5G16000.1
NIK1
NSP-interacting kinase 1
Chr4_-_433938 0.58 AT4G01000.2
AT4G01000.1
AT4G01000
Ubiquitin-like superfamily protein
Chr1_+_18724190 0.58 AT1G50560.1
CYP705A25
cytochrome P450, family 705, subfamily A, polypeptide 25
Chr5_-_9259028 0.58 AT5G26360.1
AT5G26360
TCP-1/cpn60 chaperonin family protein
Chr5_-_556623 0.57 AT5G02500.1
HSC70-1
heat shock cognate protein 70-1
Chr5_-_556442 0.57 AT5G02500.2
HSC70-1
heat shock cognate protein 70-1
Chr3_+_3034477 0.57 AT3G09900.1
RABE1e
RAB GTPase homolog E1E
Chr1_-_29239484 0.57 AT1G77760.1
NIA1
nitrate reductase 1
Chr1_-_8414886 0.57 AT1G23800.1
AT1G23800.2
ALDH2B7
aldehyde dehydrogenase 2B7
Chr4_-_17899491 0.56 AT4G38130.2
AT4G38130.1
HD1
histone deacetylase 1
Chr3_-_1238616 0.56 AT3G04580.1
AT3G04580.2
EIN4
Signal transduction histidine kinase, hybrid-type, ethylene sensor
Chr1_+_23833485 0.56 AT1G64230.1
AT1G64230.3
AT1G64230.5
AT1G64230.4
AT1G64230.2
UBC28
ubiquitin-conjugating enzyme 28
Chr3_-_21402899 0.56 AT3G57780.5
AT3G57780.4
AT3G57780.3
AT3G57780
nucleolar-like protein
Chr1_-_6008501 0.56 AT1G17480.1
IQD7
IQ-domain 7
Chr3_+_8519136 0.56 AT3G23670.1
AT3G23670.2
KINESIN-12B
phragmoplast-associated kinesin-related protein
Chr3_-_4221647 0.56 AT3G13120.1
AT3G13120.3
AT3G13120.2
AT3G13120
Ribosomal protein S10p/S20e family protein
Chr1_+_23192146 0.56 AT1G62640.2
AT1G62640.1
KAS III
3-ketoacyl-acyl carrier protein synthase III
Chr4_-_7195214 0.56 AT4G12000.3
AT4G12000.2
AT4G12000.1
AT4G12000
SNARE associated Golgi protein family
Chr1_-_21580766 0.56 AT1G58235.1
AT1G58235
hypothetical protein
Chr5_-_7955622 0.56 AT5G23590.2
AT5G23590
DNAJ heat shock N-terminal domain-containing protein
Chr5_+_7912652 0.56 AT5G23460.1
AT5G23460
hypothetical protein
Chr4_-_17104576 0.56 AT4G36140.2
AT4G36140.1
AT4G36140
disease resistance protein (TIR-NBS-LRR class)
Chr2_-_13051773 0.56 AT2G30640.1
MUG2

Chr2_+_9151940 0.56 AT2G21390.1
AT2G21390
Coatomer, alpha subunit
Chr5_-_25656067 0.55 AT5G64110.1
AT5G64110
Peroxidase superfamily protein
Chr1_+_3449567 0.55 AT1G10480.1
ZFP5
zinc finger protein 5
Chr3_-_7002435 0.55 AT3G20050.1
TCP-1
T-complex protein 1 alpha subunit
Chr3_+_19648711 0.55 AT3G52990.1
AT3G52990
Pyruvate kinase family protein
Chr3_+_19648880 0.55 AT3G52990.2
AT3G52990
Pyruvate kinase family protein
Chr3_-_7457393 0.55 AT3G21240.2
AT3G21240.1
AT3G21240.3
4CL2
4-coumarate:CoA ligase 2
Chr4_+_7196364 0.55 AT4G12005.1
AT4G12005.2
AT4G12005
hypothetical protein
Chr5_+_2046785 0.55 AT5G06660.1
AT5G06660
transmembrane/coiled-coil protein (Protein of unknown function DUF106, transmembrane)
Chr1_-_21581165 0.55 AT1G58235.2
AT1G58235
hypothetical protein
Chr4_+_6818058 0.55 AT4G11175.1
AT4G11175
Nucleic acid-binding, OB-fold-like protein
Chr1_+_5705897 0.55 AT1G16690.1
AT1G16690
Enhancer of polycomb-like transcription factor protein
Chr3_+_9295175 0.54 AT3G25585.5
AT3G25585.1
AT3G25585.3
AT3G25585.4
AT3G25585.2
AAPT2
aminoalcoholphosphotransferase
Chr3_-_8456708 0.54 AT3G23560.1
AT3G23560.2
ALF5
MATE efflux family protein
Chr2_+_13381767 0.54 AT2G31380.1
STH
salt tolerance homologue
Chr5_-_24984044 0.54 AT5G62190.1
PRH75
DEAD box RNA helicase (PRH75)
Chr5_+_26664842 0.54 AT5G66790.1
AT5G66790
Protein kinase superfamily protein
Chr1_+_4788463 0.54 AT1G13980.2
AT1G13980.1
GN
sec7 domain-containing protein
Chr5_+_20945676 0.54 AT5G51560.1
AT5G51560
Leucine-rich repeat protein kinase family protein
Chr1_-_20574348 0.54 AT1G55140.2
AT1G55140.1
AT1G55140
Ribonuclease III family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G06850

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.5 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.4 1.7 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.3 1.4 GO:0046713 borate transport(GO:0046713)
0.3 0.9 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.3 0.9 GO:1990532 stress response to nickel ion(GO:1990532)
0.3 0.8 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.3 0.8 GO:0055047 generative cell mitosis(GO:0055047)
0.2 0.7 GO:0071258 cellular response to gravity(GO:0071258)
0.2 0.7 GO:0035247 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.2 0.7 GO:0071461 cellular response to redox state(GO:0071461)
0.2 0.7 GO:0019695 choline metabolic process(GO:0019695)
0.2 1.1 GO:1902407 assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) phragmoplast assembly(GO:0000914) assembly of actomyosin apparatus involved in mitotic cytokinesis(GO:1902407)
0.2 0.7 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.2 0.7 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.2 0.9 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.2 1.3 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.2 0.6 GO:0018065 protein-cofactor linkage(GO:0018065)
0.2 1.1 GO:0010376 stomatal complex formation(GO:0010376)
0.2 1.0 GO:0070861 regulation of protein exit from endoplasmic reticulum(GO:0070861) positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.2 0.6 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.2 0.8 GO:0071312 cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.2 0.6 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.2 0.6 GO:0019184 glutathione biosynthetic process(GO:0006750) nonribosomal peptide biosynthetic process(GO:0019184)
0.2 0.7 GO:0045604 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.2 0.5 GO:0002009 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.2 0.2 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.2 0.5 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.2 0.2 GO:0035493 SNARE complex assembly(GO:0035493)
0.2 2.0 GO:0017157 regulation of exocytosis(GO:0017157)
0.2 0.5 GO:0042908 xenobiotic transport(GO:0042908)
0.2 0.5 GO:0031506 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506) response to cobalt ion(GO:0032025)
0.2 0.7 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.2 0.7 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.2 0.5 GO:0015755 hexose transport(GO:0008645) fructose transport(GO:0015755)
0.2 0.5 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.2 0.6 GO:0019322 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.2 1.5 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.2 2.6 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.2 0.6 GO:0006023 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.2 2.9 GO:0010555 response to mannitol(GO:0010555)
0.2 1.4 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 0.4 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.1 0.7 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.1 0.4 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.1 0.1 GO:0034969 histone arginine methylation(GO:0034969)
0.1 0.7 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.1 0.6 GO:2000736 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.1 0.3 GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.1 0.4 GO:0035017 cuticle pattern formation(GO:0035017)
0.1 0.4 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.1 0.7 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056)
0.1 0.7 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.1 1.1 GO:0016045 detection of bacterium(GO:0016045)
0.1 1.0 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.1 0.7 GO:0042550 photosystem I stabilization(GO:0042550)
0.1 0.7 GO:0015824 proline transport(GO:0015824)
0.1 0.4 GO:0009558 embryo sac cellularization(GO:0009558)
0.1 0.5 GO:0010070 zygote asymmetric cell division(GO:0010070)
0.1 0.8 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 0.6 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.1 0.4 GO:0043181 vacuolar sequestering(GO:0043181)
0.1 0.8 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.1 0.5 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 0.4 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.1 1.8 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.1 0.4 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.1 0.7 GO:1990169 detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169)
0.1 0.2 GO:0051046 regulation of secretion(GO:0051046) regulation of secretion by cell(GO:1903530)
0.1 0.2 GO:1901672 positive regulation of systemic acquired resistance(GO:1901672)
0.1 1.2 GO:0006450 regulation of translational fidelity(GO:0006450)
0.1 0.6 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.1 0.3 GO:0019279 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.1 0.3 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 0.3 GO:0000212 meiotic spindle organization(GO:0000212)
0.1 0.4 GO:0009660 amyloplast organization(GO:0009660)
0.1 0.6 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.1 0.6 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.1 0.3 GO:1902066 regulation of cell wall pectin metabolic process(GO:1902066)
0.1 0.3 GO:0080051 cutin transport(GO:0080051)
0.1 0.3 GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000472) endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000480)
0.1 1.7 GO:0010039 response to iron ion(GO:0010039)
0.1 0.5 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 0.3 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.1 1.0 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.1 0.2 GO:0080171 lytic vacuole organization(GO:0080171)
0.1 0.5 GO:0048455 stamen formation(GO:0048455)
0.1 1.0 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1 0.5 GO:0007035 vacuolar acidification(GO:0007035) intracellular pH reduction(GO:0051452)
0.1 0.5 GO:0019401 alditol biosynthetic process(GO:0019401)
0.1 0.3 GO:0010541 acropetal auxin transport(GO:0010541)
0.1 0.2 GO:0010045 response to nickel cation(GO:0010045)
0.1 0.4 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.1 0.3 GO:0010434 nectary development(GO:0010254) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 0.7 GO:0046473 phosphatidic acid metabolic process(GO:0046473)
0.1 3.0 GO:0070417 cellular response to cold(GO:0070417)
0.1 0.4 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.3 GO:0033259 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.1 0.3 GO:0000492 box C/D snoRNP assembly(GO:0000492) regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.1 0.3 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.1 0.4 GO:0015739 sialic acid transport(GO:0015739)
0.1 0.3 GO:0033120 positive regulation of RNA splicing(GO:0033120)
0.1 0.4 GO:0010032 meiotic chromosome condensation(GO:0010032)
0.1 0.3 GO:0010483 pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.1 0.8 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.1 0.9 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 0.3 GO:0015804 neutral amino acid transport(GO:0015804)
0.1 1.1 GO:0006303 double-strand break repair via nonhomologous end joining(GO:0006303)
0.1 0.3 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 0.3 GO:0034982 mitochondrial protein processing(GO:0034982) cristae formation(GO:0042407)
0.1 0.3 GO:0033306 phytol metabolic process(GO:0033306)
0.1 0.3 GO:0033240 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.1 0.4 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.1 0.9 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.1 0.2 GO:0048478 replication fork protection(GO:0048478)
0.1 0.5 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.1 0.3 GO:1902446 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 0.3 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 0.6 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.1 0.3 GO:0019474 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.1 0.6 GO:0009643 photosynthetic acclimation(GO:0009643)
0.1 0.4 GO:0010080 regulation of floral meristem growth(GO:0010080) inflorescence meristem growth(GO:0010450)
0.1 0.6 GO:0010065 primary meristem tissue development(GO:0010065)
0.1 0.7 GO:0018344 protein geranylgeranylation(GO:0018344)
0.1 1.5 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.1 0.2 GO:0016237 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.1 0.4 GO:0060919 auxin influx(GO:0060919)
0.1 0.7 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.1 0.2 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.1 0.2 GO:0090549 response to carbon starvation(GO:0090549)
0.1 0.5 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.1 0.4 GO:0005980 glycogen catabolic process(GO:0005980)
0.1 0.4 GO:0070070 proton-transporting V-type ATPase complex assembly(GO:0070070) vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.1 0.6 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.1 0.2 GO:0018342 protein prenylation(GO:0018342) prenylation(GO:0097354)
0.1 0.5 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.1 1.5 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 1.0 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.2 GO:0042353 fucose biosynthetic process(GO:0042353)
0.1 1.4 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.1 0.2 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.1 1.1 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.1 0.7 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 0.9 GO:0060627 regulation of vesicle-mediated transport(GO:0060627)
0.1 0.2 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.1 0.4 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.1 2.4 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.1 0.3 GO:0070601 centromeric sister chromatid cohesion(GO:0070601)
0.1 0.6 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.3 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.1 0.5 GO:0045898 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.1 0.3 GO:0070509 calcium ion import(GO:0070509)
0.1 0.6 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.1 1.6 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.1 0.3 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.1 0.6 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.1 1.5 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 0.2 GO:0009945 radial axis specification(GO:0009945)
0.1 0.3 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 0.6 GO:0010540 basipetal auxin transport(GO:0010540)
0.1 0.5 GO:0032456 endocytic recycling(GO:0032456)
0.1 0.8 GO:0006265 DNA topological change(GO:0006265)
0.1 0.2 GO:0090392 regulation of multicellular organism growth(GO:0040014) sepal giant cell differentiation(GO:0090392) regulation of adaxial/abaxial pattern formation(GO:2000011)
0.1 0.8 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.1 0.2 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
0.1 0.3 GO:0006901 vesicle coating(GO:0006901)
0.1 0.2 GO:0046521 sphingoid catabolic process(GO:0046521)
0.1 0.9 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 0.3 GO:0051601 exocyst localization(GO:0051601)
0.1 0.1 GO:0031542 positive regulation of anthocyanin biosynthetic process(GO:0031542)
0.1 0.2 GO:1990882 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.1 0.2 GO:0000055 ribosomal large subunit export from nucleus(GO:0000055)
0.1 0.3 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 2.5 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 0.6 GO:0010088 phloem development(GO:0010088)
0.1 0.2 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.1 0.2 GO:1900369 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.1 1.3 GO:0009913 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.1 0.6 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.1 1.7 GO:0042026 protein refolding(GO:0042026)
0.1 0.2 GO:0016578 histone deubiquitination(GO:0016578)
0.1 0.4 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.1 0.1 GO:0070827 cellular component maintenance(GO:0043954) chromatin maintenance(GO:0070827)
0.1 0.4 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.1 0.4 GO:0033617 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.1 0.8 GO:0048766 root hair initiation(GO:0048766)
0.1 0.2 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.1 0.7 GO:0046785 microtubule polymerization(GO:0046785)
0.1 0.2 GO:0009088 threonine biosynthetic process(GO:0009088)
0.1 0.2 GO:0070536 protein K63-linked deubiquitination(GO:0070536)
0.1 1.2 GO:0009638 phototropism(GO:0009638)
0.1 0.2 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.1 0.3 GO:0051320 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.1 0.5 GO:0007105 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.1 0.3 GO:1902969 mitotic DNA replication(GO:1902969)
0.1 0.4 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.1 0.2 GO:0048530 fruit morphogenesis(GO:0048530)
0.1 0.3 GO:0032465 regulation of cytokinesis(GO:0032465)
0.1 0.3 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 0.5 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.3 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.0 0.2 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.0 0.4 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.1 GO:1903312 negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA processing(GO:0050686) negative regulation of mRNA polyadenylation(GO:1900364) negative regulation of mRNA metabolic process(GO:1903312)
0.0 0.6 GO:0006620 posttranslational protein targeting to membrane(GO:0006620)
0.0 0.5 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.1 GO:0006883 cellular sodium ion homeostasis(GO:0006883)
0.0 0.1 GO:0030242 pexophagy(GO:0030242)
0.0 2.6 GO:0009631 cold acclimation(GO:0009631)
0.0 0.5 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.0 0.7 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.2 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.0 1.0 GO:1902099 regulation of mitotic metaphase/anaphase transition(GO:0030071) regulation of metaphase/anaphase transition of cell cycle(GO:1902099)
0.0 0.4 GO:0090355 positive regulation of auxin metabolic process(GO:0090355)
0.0 0.4 GO:0034312 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.0 0.2 GO:0080121 AMP transport(GO:0080121)
0.0 0.4 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.2 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.0 0.5 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.4 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 0.9 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.6 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.8 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.0 0.1 GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000466)
0.0 0.4 GO:0033750 ribosomal subunit export from nucleus(GO:0000054) ribosome localization(GO:0033750) establishment of ribosome localization(GO:0033753) rRNA-containing ribonucleoprotein complex export from nucleus(GO:0071428)
0.0 0.2 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.0 0.2 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.0 0.2 GO:0006517 protein deglycosylation(GO:0006517)
0.0 0.4 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.0 0.8 GO:0045927 positive regulation of growth(GO:0045927)
0.0 0.3 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.0 0.2 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.0 0.1 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.0 0.4 GO:0071329 cellular response to disaccharide stimulus(GO:0071324) cellular response to sucrose stimulus(GO:0071329)
0.0 0.7 GO:0009645 response to low light intensity stimulus(GO:0009645)
0.0 0.7 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.1 GO:0010587 miRNA catabolic process(GO:0010587)
0.0 0.2 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.5 GO:0000266 mitochondrial fission(GO:0000266)
0.0 0.1 GO:0009584 detection of visible light(GO:0009584)
0.0 0.3 GO:0031125 rRNA 3'-end processing(GO:0031125)
0.0 0.3 GO:0006565 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.0 0.0 GO:0032388 positive regulation of intracellular transport(GO:0032388)
0.0 0.6 GO:0009089 lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 0.2 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.0 0.1 GO:0090114 COPII-coated vesicle budding(GO:0090114)
0.0 0.1 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.0 0.8 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.7 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.1 GO:0051503 adenine nucleotide transport(GO:0051503)
0.0 0.4 GO:0031647 regulation of protein stability(GO:0031647)
0.0 0.8 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.1 GO:0042989 sequestering of actin monomers(GO:0042989)
0.0 0.2 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.0 0.2 GO:0015936 coenzyme A metabolic process(GO:0015936)
0.0 0.3 GO:0050879 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.0 0.1 GO:0071219 cellular response to molecule of bacterial origin(GO:0071219)
0.0 0.5 GO:0051026 chiasma assembly(GO:0051026)
0.0 0.1 GO:0048451 petal formation(GO:0048451)
0.0 0.3 GO:0010506 regulation of autophagy(GO:0010506)
0.0 0.2 GO:0035067 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.0 1.6 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.0 0.3 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.0 0.3 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 0.2 GO:1900911 regulation of ethylene biosynthetic process(GO:0010364) regulation of sulfur amino acid metabolic process(GO:0031335) regulation of olefin metabolic process(GO:1900908) regulation of olefin biosynthetic process(GO:1900911)
0.0 0.1 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.0 1.4 GO:0006897 endocytosis(GO:0006897)
0.0 0.2 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.0 0.1 GO:0016540 protein autoprocessing(GO:0016540)
0.0 0.6 GO:1900674 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.7 GO:0046839 phospholipid dephosphorylation(GO:0046839) phosphatidylinositol dephosphorylation(GO:0046856)
0.0 1.2 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.0 0.5 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.1 GO:0045739 positive regulation of DNA repair(GO:0045739)
0.0 1.3 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.1 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.0 0.2 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 0.1 GO:0042256 mature ribosome assembly(GO:0042256)
0.0 0.2 GO:0010358 leaf shaping(GO:0010358)
0.0 0.1 GO:0097576 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144) regulation of vacuole organization(GO:0044088) vacuole fusion(GO:0097576)
0.0 0.2 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.0 0.2 GO:0009942 longitudinal axis specification(GO:0009942)
0.0 0.1 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.0 3.6 GO:0006457 protein folding(GO:0006457)
0.0 0.1 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 0.2 GO:0045116 protein neddylation(GO:0045116)
0.0 0.1 GO:0048479 style development(GO:0048479)
0.0 0.7 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.2 GO:0006821 chloride transport(GO:0006821)
0.0 0.1 GO:0072387 FAD metabolic process(GO:0046443) flavin adenine dinucleotide metabolic process(GO:0072387)
0.0 0.3 GO:0044070 regulation of anion transport(GO:0044070)
0.0 0.1 GO:0019627 urea metabolic process(GO:0019627)
0.0 0.3 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.3 GO:0051567 histone H3-K9 methylation(GO:0051567)
0.0 0.1 GO:0080186 developmental vegetative growth(GO:0080186)
0.0 4.6 GO:0046777 protein autophosphorylation(GO:0046777)
0.0 0.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.5 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 1.4 GO:0046488 phosphatidylinositol metabolic process(GO:0046488)
0.0 0.1 GO:0048255 mRNA stabilization(GO:0048255)
0.0 0.1 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.0 0.1 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.0 0.4 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.1 GO:0080009 mRNA methylation(GO:0080009)
0.0 0.3 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.1 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.0 0.3 GO:1902074 response to salt(GO:1902074)
0.0 0.6 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.5 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.2 GO:0006828 manganese ion transport(GO:0006828)
0.0 0.4 GO:0031167 rRNA methylation(GO:0031167)
0.0 0.0 GO:0046085 adenosine metabolic process(GO:0046085)
0.0 0.1 GO:0046506 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.0 0.3 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.0 0.1 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.0 0.8 GO:0009846 pollen germination(GO:0009846)
0.0 3.6 GO:0007017 microtubule-based process(GO:0007017)
0.0 0.3 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.2 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.0 0.3 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.3 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.2 GO:1905156 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155) negative regulation of photosynthesis(GO:1905156)
0.0 0.4 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.2 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.3 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 0.0 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.0 0.1 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.0 0.1 GO:0010161 red light signaling pathway(GO:0010161)
0.0 0.6 GO:0006414 translational elongation(GO:0006414)
0.0 0.1 GO:0090342 cell aging(GO:0007569) regulation of cell aging(GO:0090342)
0.0 0.1 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.0 0.1 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 0.1 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.3 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.3 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.0 2.4 GO:0043413 protein glycosylation(GO:0006486) glycoprotein biosynthetic process(GO:0009101) macromolecule glycosylation(GO:0043413)
0.0 0.7 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.0 0.0 GO:0046398 UDP-glucuronate metabolic process(GO:0046398)
0.0 0.1 GO:0046519 sphingoid metabolic process(GO:0046519)
0.0 1.4 GO:0046939 nucleotide phosphorylation(GO:0046939)
0.0 0.2 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.1 GO:0042493 response to drug(GO:0042493)
0.0 0.1 GO:0090207 regulation of triglyceride metabolic process(GO:0090207) mitochondrial mRNA processing(GO:0090615)
0.0 0.2 GO:0032273 positive regulation of actin filament polymerization(GO:0030838) positive regulation of protein polymerization(GO:0032273) actin nucleation(GO:0045010)
0.0 0.1 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.0 GO:1902583 multi-organism intracellular transport(GO:1902583)
0.0 0.1 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.1 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.0 0.1 GO:0044154 histone H3-K14 acetylation(GO:0044154)
0.0 0.1 GO:0051569 regulation of histone H3-K4 methylation(GO:0051569)
0.0 0.4 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.2 GO:0046040 IMP metabolic process(GO:0046040)
0.0 0.3 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.0 0.4 GO:0010075 regulation of meristem growth(GO:0010075)
0.0 0.4 GO:1902645 abscisic acid biosynthetic process(GO:0009688) apocarotenoid biosynthetic process(GO:0043289) tertiary alcohol biosynthetic process(GO:1902645)
0.0 0.2 GO:0043967 histone H4 acetylation(GO:0043967)
0.0 0.2 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.0 0.0 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.0 0.1 GO:0080183 response to photooxidative stress(GO:0080183)
0.0 0.4 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 0.1 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.0 0.1 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.1 GO:0010098 suspensor development(GO:0010098)
0.0 0.3 GO:0015985 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.0 0.1 GO:0006513 protein monoubiquitination(GO:0006513)
0.0 0.2 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.2 GO:0071484 cellular response to light intensity(GO:0071484)
0.0 0.4 GO:0070585 protein targeting to mitochondrion(GO:0006626) protein localization to mitochondrion(GO:0070585) establishment of protein localization to mitochondrion(GO:0072655)
0.0 0.6 GO:0042176 regulation of protein catabolic process(GO:0042176)
0.0 0.2 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.4 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.1 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 0.2 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.2 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.8 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.2 GO:0035196 production of miRNAs involved in gene silencing by miRNA(GO:0035196)
0.0 0.0 GO:0090481 pyrimidine nucleotide-sugar transmembrane transport(GO:0090481)
0.0 0.1 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 1.9 GO:0009451 RNA modification(GO:0009451)
0.0 0.1 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.0 0.0 GO:0045851 pH reduction(GO:0045851)
0.0 1.8 GO:0009657 plastid organization(GO:0009657)
0.0 0.1 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.0 0.0 GO:0051668 localization within membrane(GO:0051668)
0.0 0.4 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.4 GO:0043673 lateral plasma membrane(GO:0016328) pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.3 1.1 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.2 3.0 GO:0045298 tubulin complex(GO:0045298)
0.2 0.7 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.2 0.9 GO:0018444 translation release factor complex(GO:0018444)
0.2 1.9 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.2 0.5 GO:1990112 RQC complex(GO:1990112)
0.2 3.2 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.2 0.8 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.2 1.1 GO:0090395 plant cell papilla(GO:0090395)
0.1 1.1 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.1 0.7 GO:0034515 proteasome storage granule(GO:0034515)
0.1 0.5 GO:0030870 Mre11 complex(GO:0030870)
0.1 0.3 GO:0044426 cell wall part(GO:0044426) external encapsulating structure part(GO:0044462)
0.1 0.1 GO:0043230 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.1 0.3 GO:1990298 bub1-bub3 complex(GO:1990298)
0.1 0.6 GO:0030126 COPI vesicle coat(GO:0030126) COPI-coated vesicle membrane(GO:0030663)
0.1 1.1 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.1 0.6 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 1.0 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.1 0.4 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.1 0.5 GO:0031597 cytosolic proteasome complex(GO:0031597)
0.1 0.4 GO:0070505 pollen coat(GO:0070505)
0.1 0.4 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.1 0.5 GO:0000796 condensin complex(GO:0000796)
0.1 2.1 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 0.3 GO:0000836 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.1 0.5 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.1 0.6 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.1 0.5 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 0.5 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.1 2.2 GO:0055028 cortical microtubule(GO:0055028)
0.1 0.2 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 0.4 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 0.8 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.1 0.8 GO:0000974 Prp19 complex(GO:0000974)
0.1 0.6 GO:0016272 prefoldin complex(GO:0016272)
0.1 0.3 GO:0032133 chromosome passenger complex(GO:0032133)
0.1 1.0 GO:0030125 clathrin vesicle coat(GO:0030125)
0.1 0.3 GO:0000938 GARP complex(GO:0000938)
0.1 0.4 GO:0031298 replication fork protection complex(GO:0031298)
0.1 0.5 GO:0030118 clathrin coat(GO:0030118)
0.1 0.6 GO:1902562 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.1 0.2 GO:0034272 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.1 0.2 GO:0032153 cell division site(GO:0032153)
0.1 0.3 GO:0000930 gamma-tubulin complex(GO:0000930)
0.1 2.6 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 0.8 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.1 0.4 GO:0030897 HOPS complex(GO:0030897)
0.1 1.2 GO:0035097 histone methyltransferase complex(GO:0035097)
0.1 0.8 GO:0031902 late endosome membrane(GO:0031902)
0.1 0.3 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.1 0.5 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.0 1.2 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.2 GO:0030119 AP-type membrane coat adaptor complex(GO:0030119)
0.0 0.5 GO:0031234 extrinsic component of cytoplasmic side of plasma membrane(GO:0031234)
0.0 0.3 GO:0070552 BRISC complex(GO:0070552)
0.0 6.3 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 4.2 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.4 GO:0009986 cell surface(GO:0009986)
0.0 0.2 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.0 0.1 GO:0012507 ER to Golgi transport vesicle membrane(GO:0012507)
0.0 0.4 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.6 GO:0030867 rough endoplasmic reticulum membrane(GO:0030867)
0.0 0.3 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0 1.0 GO:0005871 kinesin complex(GO:0005871)
0.0 0.3 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 0.2 GO:0001673 male germ cell nucleus(GO:0001673)
0.0 1.3 GO:0009504 cell plate(GO:0009504)
0.0 1.0 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 1.2 GO:0005643 nuclear pore(GO:0005643)
0.0 0.3 GO:0089701 U2AF(GO:0089701)
0.0 1.5 GO:0010319 stromule(GO:0010319)
0.0 0.3 GO:0009503 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.0 0.5 GO:0005769 early endosome(GO:0005769)
0.0 0.4 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.2 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.3 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.0 0.5 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.8 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.3 GO:0017119 Golgi transport complex(GO:0017119)
0.0 3.2 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.2 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 0.2 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.0 0.1 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.0 0.2 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.0 0.4 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.2 GO:0055037 recycling endosome(GO:0055037)
0.0 0.4 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 0.9 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 5.1 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.2 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.2 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.0 1.2 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.0 0.4 GO:0031977 thylakoid lumen(GO:0031977)
0.0 0.1 GO:0071818 BAT3 complex(GO:0071818)
0.0 0.2 GO:0005839 proteasome core complex(GO:0005839)
0.0 0.1 GO:0031209 SCAR complex(GO:0031209)
0.0 0.5 GO:0030427 site of polarized growth(GO:0030427)
0.0 1.4 GO:0022626 cytosolic ribosome(GO:0022626)
0.0 0.1 GO:0030660 Golgi-associated vesicle membrane(GO:0030660)
0.0 0.3 GO:0030686 90S preribosome(GO:0030686)
0.0 0.4 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 2.2 GO:0015935 small ribosomal subunit(GO:0015935)
0.0 4.6 GO:0005768 endosome(GO:0005768)
0.0 0.2 GO:0031011 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.0 0.1 GO:0000782 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.0 0.5 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.1 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.0 0.5 GO:0005938 cell cortex(GO:0005938) cytoplasmic region(GO:0099568)
0.0 0.1 GO:0035861 site of double-strand break(GO:0035861)
0.0 0.6 GO:0000145 exocyst(GO:0000145)
0.0 0.3 GO:0000347 THO complex(GO:0000347)
0.0 0.4 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.2 GO:0048500 signal recognition particle(GO:0048500)
0.0 0.3 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.0 0.3 GO:0033176 proton-transporting V-type ATPase complex(GO:0033176)
0.0 0.6 GO:0009524 phragmoplast(GO:0009524)
0.0 1.0 GO:0031227 intrinsic component of endoplasmic reticulum membrane(GO:0031227)
0.0 2.5 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 9.8 GO:0009570 chloroplast stroma(GO:0009570)
0.0 10.0 GO:0055044 cell-cell junction(GO:0005911) plasmodesma(GO:0009506) cell junction(GO:0030054) symplast(GO:0055044)
0.0 0.2 GO:0009574 preprophase band(GO:0009574)
0.0 0.1 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.2 GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.0 0.6 GO:0016592 mediator complex(GO:0016592)
0.0 0.2 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 0.1 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 0.3 GO:0005680 anaphase-promoting complex(GO:0005680)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.1 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.3 0.3 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.3 0.9 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.3 1.4 GO:0080139 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.3 1.1 GO:0050162 oxalate oxidase activity(GO:0050162)
0.3 0.8 GO:0005078 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.2 0.7 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.2 0.9 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.2 0.7 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.2 0.7 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.2 0.7 GO:0004775 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.2 0.9 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.2 0.6 GO:0070336 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.2 1.4 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.2 0.6 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.2 0.9 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.2 0.9 GO:0004594 pantothenate kinase activity(GO:0004594)
0.2 0.9 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.2 0.5 GO:0019003 GDP binding(GO:0019003)
0.2 0.9 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.2 0.5 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.2 3.2 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.2 0.7 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.2 1.4 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.2 0.6 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.2 0.9 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.1 1.7 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 0.4 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.1 0.4 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 0.1 GO:0008469 histone-arginine N-methyltransferase activity(GO:0008469)
0.1 0.9 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.7 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 0.7 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.1 0.9 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.8 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.1 0.4 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.1 0.6 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 1.0 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.1 1.0 GO:0008026 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.1 1.5 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.1 0.3 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.1 0.7 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.4 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.1 0.5 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.1 0.3 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.1 0.4 GO:0050347 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.1 0.6 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.1 1.3 GO:0002020 protease binding(GO:0002020)
0.1 0.5 GO:0008490 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225)
0.1 1.0 GO:0008318 protein prenyltransferase activity(GO:0008318)
0.1 0.8 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.3 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.1 0.6 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.1 0.3 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 0.3 GO:0016504 peptidase activator activity(GO:0016504)
0.1 0.4 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.1 1.0 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.1 0.4 GO:0016433 rRNA (adenine) methyltransferase activity(GO:0016433)
0.1 0.4 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.1 0.5 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.1 3.2 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.5 GO:0019904 protein domain specific binding(GO:0019904)
0.1 0.4 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 0.9 GO:0032041 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 0.4 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.1 0.4 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 1.3 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 2.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.3 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.1 0.7 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 1.3 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.3 GO:0070034 telomerase RNA binding(GO:0070034)
0.1 1.3 GO:0051879 Hsp90 protein binding(GO:0051879)
0.1 0.7 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.2 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.1 1.0 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 0.2 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.1 0.3 GO:0016040 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.1 0.3 GO:0016748 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.1 0.5 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.9 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 0.6 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.4 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.1 0.3 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.1 0.2 GO:0019779 Atg8 activating enzyme activity(GO:0019779)
0.1 0.3 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 1.4 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 0.2 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.1 0.3 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.1 0.4 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 0.1 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142)
0.1 1.1 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.1 0.8 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 2.1 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.7 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 0.9 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.1 0.8 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.1 0.3 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.1 0.4 GO:0009884 cytokinin receptor activity(GO:0009884)
0.1 0.5 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.1 0.4 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 0.5 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 0.4 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.1 0.3 GO:0035175 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.1 0.3 GO:0016649 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.1 0.3 GO:0034511 U3 snoRNA binding(GO:0034511)
0.1 0.3 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.1 0.4 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.1 0.9 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.1 0.2 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.1 0.2 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.1 0.4 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.1 0.2 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.1 0.2 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.1 0.6 GO:0017022 myosin binding(GO:0017022)
0.1 0.4 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 0.6 GO:0035198 miRNA binding(GO:0035198)
0.1 0.1 GO:0008144 drug binding(GO:0008144)
0.1 0.1 GO:0015462 protein-transmembrane transporting ATPase activity(GO:0015462)
0.1 0.2 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.1 0.9 GO:0005487 nucleocytoplasmic transporter activity(GO:0005487)
0.1 0.5 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 3.4 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.1 1.5 GO:0033558 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.1 0.4 GO:0047714 galactolipase activity(GO:0047714)
0.1 0.3 GO:0009883 red or far-red light photoreceptor activity(GO:0009883)
0.1 0.5 GO:0000014 single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.1 0.6 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.1 0.3 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.1 0.6 GO:0102391 acyl-CoA ligase activity(GO:0003996) decanoate--CoA ligase activity(GO:0102391)
0.0 0.3 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.4 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 0.5 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.5 GO:0050308 sugar-phosphatase activity(GO:0050308)
0.0 1.2 GO:0097472 cyclin-dependent protein serine/threonine kinase activity(GO:0004693) cyclin-dependent protein kinase activity(GO:0097472)
0.0 0.1 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.1 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.0 0.8 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.2 GO:0030371 translation repressor activity(GO:0030371)
0.0 0.4 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.0 3.3 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.2 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.0 0.4 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 1.0 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.6 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 0.9 GO:0030276 clathrin binding(GO:0030276)
0.0 0.1 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.0 0.1 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.0 0.2 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0 0.5 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 0.7 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.0 0.6 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.0 0.4 GO:0003916 DNA topoisomerase activity(GO:0003916) DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 1.6 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.2 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 0.2 GO:0001671 ATPase activator activity(GO:0001671)
0.0 0.2 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.0 0.3 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.0 0.1 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.4 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.0 0.2 GO:0004324 ferredoxin-NADP+ reductase activity(GO:0004324)
0.0 0.2 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 2.0 GO:0009931 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.4 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.1 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 0.2 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.3 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.0 0.6 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.4 GO:0051117 ATPase binding(GO:0051117)
0.0 0.4 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.1 GO:0019172 glyoxalase III activity(GO:0019172)
0.0 0.8 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.0 2.1 GO:0043130 ubiquitin binding(GO:0043130)
0.0 0.2 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.0 0.2 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.1 GO:0098518 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192) polynucleotide phosphatase activity(GO:0098518)
0.0 0.1 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 0.8 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.9 GO:0043022 ribosome binding(GO:0043022)
0.0 0.1 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.1 GO:0004049 anthranilate synthase activity(GO:0004049)
0.0 0.1 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839) NADPH binding(GO:0070402)
0.0 0.1 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.0 0.2 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.0 0.1 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.3 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.4 GO:0008097 5S rRNA binding(GO:0008097)
0.0 1.6 GO:0043621 protein self-association(GO:0043621)
0.0 0.8 GO:0004402 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.0 0.4 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.2 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 0.2 GO:0030332 cyclin binding(GO:0030332)
0.0 0.5 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 3.6 GO:0005525 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.2 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 7.2 GO:0005198 structural molecule activity(GO:0005198)
0.0 0.1 GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.0 0.2 GO:0042285 xylosyltransferase activity(GO:0042285)
0.0 0.1 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.1 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.2 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.3 GO:0008312 7S RNA binding(GO:0008312)
0.0 0.3 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 1.9 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.6 GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor(GO:0016641)
0.0 0.1 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.0 0.1 GO:0010313 phytochrome binding(GO:0010313)
0.0 1.6 GO:0004843 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.0 0.4 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.5 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.0 0.2 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.0 1.5 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.1 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.0 0.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 1.1 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.2 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 3.0 GO:0008017 microtubule binding(GO:0008017)
0.0 0.2 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.0 0.4 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.3 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.1 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.0 0.2 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.2 GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism(GO:0044769)
0.0 0.7 GO:0010181 FMN binding(GO:0010181)
0.0 0.1 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.0 0.1 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 1.0 GO:0044389 ubiquitin-like protein ligase binding(GO:0044389)
0.0 1.2 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 0.1 GO:0004072 aspartate kinase activity(GO:0004072)
0.0 1.3 GO:0042393 histone binding(GO:0042393)
0.0 0.1 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.6 GO:0019887 protein kinase regulator activity(GO:0019887)
0.0 1.7 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.8 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.0 0.1 GO:0016151 nickel cation binding(GO:0016151)
0.0 0.2 GO:0060090 binding, bridging(GO:0060090)
0.0 0.5 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.0 0.8 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 0.1 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 1.8 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.1 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.0 0.2 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.0 0.6 GO:0017137 Rab GTPase binding(GO:0017137)
0.0 0.2 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.1 GO:0004567 beta-mannosidase activity(GO:0004567)
0.0 0.2 GO:0015631 tubulin binding(GO:0015631)
0.0 0.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.1 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.0 0.1 GO:0008022 protein C-terminus binding(GO:0008022)
0.0 0.3 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.2 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.0 0.1 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 0.3 GO:0016597 amino acid binding(GO:0016597)
0.0 0.1 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.1 GO:0008061 chitin binding(GO:0008061)
0.0 0.2 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.6 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.3 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.2 GO:0004568 chitinase activity(GO:0004568)
0.0 0.3 GO:0008565 protein transporter activity(GO:0008565)
0.0 0.1 GO:0008143 poly(A) binding(GO:0008143)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 PID NECTIN PATHWAY Nectin adhesion pathway
0.2 0.2 PID PDGFRA PATHWAY PDGFR-alpha signaling pathway
0.2 0.7 SIG CHEMOTAXIS Genes related to chemotaxis
0.2 0.2 PID IL4 2PATHWAY IL4-mediated signaling events
0.2 0.5 PID TCPTP PATHWAY Signaling events mediated by TCPTP
0.2 0.5 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.2 0.6 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.1 0.1 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.1 0.3 PID RAS PATHWAY Regulation of Ras family activation
0.1 0.5 PID S1P S1P1 PATHWAY S1P1 pathway
0.1 0.2 PID TRKR PATHWAY Neurotrophic factor-mediated Trk receptor signaling
0.1 0.5 PID PLK1 PATHWAY PLK1 signaling events
0.1 0.5 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.1 0.2 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.5 PID TELOMERASE PATHWAY Regulation of Telomerase
0.1 0.4 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.2 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.0 0.0 PID S1P META PATHWAY Sphingosine 1-phosphate (S1P) pathway
0.0 0.1 PID ARF 3PATHWAY Arf1 pathway
0.0 0.1 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 0.1 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.3 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.3 1.0 REACTOME ARMS MEDIATED ACTIVATION Genes involved in ARMS-mediated activation
0.3 1.5 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.2 0.7 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.2 1.5 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.2 0.6 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.1 0.4 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.1 0.3 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.1 0.2 REACTOME FRS2 MEDIATED CASCADE Genes involved in FRS2-mediated cascade
0.1 0.3 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.1 0.4 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.1 0.1 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.1 0.3 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.2 REACTOME TRANS GOLGI NETWORK VESICLE BUDDING Genes involved in trans-Golgi Network Vesicle Budding
0.0 0.8 REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex
0.0 0.3 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.2 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.0 0.0 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.0 0.0 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.0 0.0 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.0 0.1 REACTOME REPAIR SYNTHESIS FOR GAP FILLING BY DNA POL IN TC NER Genes involved in Repair synthesis for gap-filling by DNA polymerase in TC-NER