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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G03800

Z-value: 1.02

Transcription factors associated with AT1G03800

Gene Symbol Gene ID Gene Info
AT1G03800 ERF domain protein 10

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ERF10arTal_v1_Chr1_-_958383_9583830.362.0e-01Click!

Activity profile of AT1G03800 motif

Sorted Z-values of AT1G03800 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_7421828 1.14 AT4G12520.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_16998925 1.09 AT5G42510.1
Disease resistance-responsive (dirigent-like protein) family protein
Chr3_-_21798303 1.08 AT3G58990.1
isopropylmalate isomerase 1
Chr3_-_7656053 1.02 AT3G21720.1
isocitrate lyase
Chr5_-_19036938 1.01 AT5G46890.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_8559066 0.99 AT1G24170.1
Nucleotide-diphospho-sugar transferases superfamily protein
Chr1_-_28581315 0.95 AT1G76160.1
SKU5 similar 5
Chr5_+_4370692 0.95 AT5G13580.1
ABC-2 type transporter family protein
Chr5_-_17331646 0.90 AT5G43170.1
zinc-finger protein 3
Chr1_+_25574381 0.88 AT1G68238.1
transmembrane protein
Chr5_+_3783930 0.88 AT5G11740.1
arabinogalactan protein 15
Chr1_+_20458952 0.85 AT1G54870.2
AT1G54870.1
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_+_18519599 0.84 AT4G39940.1
APS-kinase 2
Chr2_-_9564850 0.83 AT2G22500.1
uncoupling protein 5
Chr5_+_6690520 0.82 AT5G19800.1
hydroxyproline-rich glycoprotein family protein
Chr3_+_20354351 0.81 AT3G54940.3
AT3G54940.2
Papain family cysteine protease
Chr4_-_13022996 0.80 AT4G25490.1
C-repeat/DRE binding factor 1
Chr4_-_14886784 0.78 AT4G30450.1
glycine-rich protein
Chr5_+_4087689 0.77 AT5G12940.1
Leucine-rich repeat (LRR) family protein
Chr3_-_4834015 0.77 AT3G14440.1
nine-cis-epoxycarotenoid dioxygenase 3
Chr5_-_3172701 0.76 AT5G10130.1
Pollen Ole e 1 allergen and extensin family protein
Chr2_-_16780368 0.76 AT2G40170.1
Stress induced protein
Chr5_+_26772644 0.75 AT5G67080.1
mitogen-activated protein kinase kinase kinase 19
Chr5_-_23301689 0.75 AT5G57530.1
xyloglucan endotransglucosylase/hydrolase 12
Chr1_-_3241863 0.74 AT1G09950.1
RESPONSE TO ABA AND SALT 1
Chr4_-_13016235 0.74 AT4G25470.1
C-repeat/DRE binding factor 2
Chr2_+_15859204 0.72 AT2G37870.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_-_7493080 0.72 AT4G12730.1
FASCICLIN-like arabinogalactan 2
Chr1_-_30173109 0.71 AT1G80240.1
choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)
Chr4_+_160643 0.71 AT4G00360.1
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr2_+_17527167 0.71 AT2G41990.1
late embryogenesis abundant protein
Chr3_+_5121303 0.70 AT3G15210.1
ethylene responsive element binding factor 4
Chr4_+_12686459 0.70 AT4G24570.1
dicarboxylate carrier 2
Chr3_-_20418910 0.69 AT3G55090.1
ABC-2 type transporter family protein
Chr4_-_16644928 0.69 AT4G34950.1
Major facilitator superfamily protein
Chr5_-_7805968 0.69 AT5G23190.1
cytochrome P450, family 86, subfamily B, polypeptide 1
Chr3_+_1591115 0.69 AT3G05490.1
ralf-like 22
Chr4_-_17041131 0.69 AT4G36010.2
Pathogenesis-related thaumatin superfamily protein
Chr5_-_3728726 0.68 AT5G11590.1
Integrase-type DNA-binding superfamily protein
Chr4_-_17041326 0.68 AT4G36010.1
Pathogenesis-related thaumatin superfamily protein
Chr3_+_6840281 0.68 AT3G19680.1
hypothetical protein (DUF1005)
Chr3_-_17008528 0.67 AT3G46280.1
kinase-like protein
Chr5_+_25721733 0.67 AT5G64310.1
arabinogalactan protein 1
Chr1_+_5940292 0.66 AT1G17345.1
SAUR-like auxin-responsive protein family
Chr2_-_19352088 0.66 AT2G47140.1
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_+_17920647 0.65 AT2G43100.1
isopropylmalate isomerase 2
Chr1_+_18542061 0.64 AT1G50040.1
formin-like protein, putative (DUF1005)
Chr3_-_15617149 0.64 AT3G43720.2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_116784 0.64 AT1G01300.1
Eukaryotic aspartyl protease family protein
Chr4_+_15230008 0.63 AT4G31380.1
flowering-promoting factor-like protein
Chr3_-_15617309 0.63 AT3G43720.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_17524461 0.62 AT4G37240.1
HTH-type transcriptional regulator
Chr5_-_26129547 0.62 AT5G65390.1
arabinogalactan protein 7
Chr5_-_21125065 0.62 AT5G52020.1
Integrase-type DNA-binding superfamily protein
Chr5_+_17760865 0.62 AT5G44130.1
FASCICLIN-like arabinogalactan protein 13 precursor
Chr2_-_18821889 0.62 AT2G45680.1
TCP family transcription factor
Chr4_-_16255760 0.62 AT4G33905.1
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Chr3_-_20576249 0.62 AT3G55500.1
expansin A16
Chr5_+_16202142 0.62 AT5G40460.1
cyclin-dependent kinase inhibitor SMR3-like protein
Chr3_-_6000447 0.61 AT3G17520.1
Late embryogenesis abundant protein (LEA) family protein
Chr5_-_25843555 0.61 AT5G64660.1
CYS, MET, PRO, and GLY protein 2
Chr3_+_23438396 0.61 AT3G63470.1
serine carboxypeptidase-like 40
Chr1_+_23168767 0.60 AT1G62570.1
flavin-monooxygenase glucosinolate S-oxygenase 4
Chr4_+_8646150 0.59 AT4G15160.2
AT4G15160.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_11222789 0.58 AT1G31350.1
AT1G31350.2
KAR-UP F-box 1
Chr4_+_14368877 0.58 AT4G29140.1
MATE efflux family protein
Chr5_-_3517035 0.58 AT5G11070.1
hypothetical protein
Chr2_-_18914739 0.58 AT2G45970.1
cytochrome P450, family 86, subfamily A, polypeptide 8
Chr4_-_18098633 0.58 AT4G38770.1
proline-rich protein 4
Chr5_+_1746548 0.57 AT5G05810.1
RING/U-box superfamily protein
Chr3_+_3186266 0.57 AT3G10300.3
AT3G10300.2
AT3G10300.1
AT3G10300.5
AT3G10300.4
Calcium-binding EF-hand family protein
Chr3_-_4620305 0.56 AT3G13980.1
SKI/DACH domain protein
Chr5_-_7026753 0.56 AT5G20740.2
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_+_3595694 0.56 AT3G11430.1
glycerol-3-phosphate acyltransferase 5
Chr2_-_18744322 0.56 AT2G45470.1
FASCICLIN-like arabinogalactan protein 8
Chr2_-_19650287 0.56 AT2G48030.1
AT2G48030.2
DNAse I-like superfamily protein
Chr5_-_7026533 0.56 AT5G20740.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_-_6241510 0.56 AT1G18140.1
laccase 1
Chr4_-_9368852 0.56 AT4G16640.1
Matrixin family protein
Chr2_+_15445294 0.56 AT2G36830.1
gamma tonoplast intrinsic protein
Chr1_+_23112933 0.55 AT1G62440.1
leucine-rich repeat/extensin 2
Chr1_+_26400694 0.55 AT1G70090.1
AT1G70090.2
glucosyl transferase family 8
Chr1_+_3919237 0.55 AT1G11655.1
hypothetical protein
Chr5_-_26456154 0.55 AT5G66200.1
armadillo repeat only 2
Chr3_-_2130451 0.54 AT3G06750.1
hydroxyproline-rich glycoprotein family protein
Chr3_+_10517977 0.54 AT3G28200.1
Peroxidase superfamily protein
Chr5_+_26818949 0.54 AT5G67210.1
IRREGULAR XYLEM protein (DUF579)
Chr4_-_15954803 0.54 AT4G33070.1
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Chr5_-_6234251 0.54 AT5G18690.1
arabinogalactan protein 25
Chr1_+_954290 0.53 AT1G03790.1
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr5_-_9242854 0.53 AT5G26330.1
Cupredoxin superfamily protein
Chr5_-_19977620 0.53 AT5G49280.1
hydroxyproline-rich glycoprotein family protein
Chr3_-_5526212 0.53 AT3G16300.1
Uncharacterized protein family (UPF0497)
Chr2_-_15137012 0.53 AT2G36050.1
ovate family protein 15
Chr1_-_28551836 0.52 AT1G76090.1
sterol methyltransferase 3
Chr5_+_463073 0.52 AT5G02260.1
expansin A9
Chr2_-_17115047 0.52 AT2G41010.1
calmodulin (CAM)-binding protein of 25 kDa
Chr3_+_23201032 0.52 AT3G62720.2
AT3G62720.1
xylosyltransferase 1
Chr1_-_11436607 0.52 AT1G31860.1
AT1G31860.3
AT1G31860.2
histidine biosynthesis bifunctional protein (HISIE)
Chr1_-_25622593 0.52 AT1G68360.1
C2H2 and C2HC zinc fingers superfamily protein
Chr5_-_1217362 0.52 AT5G04340.1
6
Chr3_+_2620713 0.51 AT3G08630.1
alphavirus core family protein (DUF3411)
Chr1_+_4105223 0.51 AT1G12110.1
nitrate transporter 1.1
Chr5_+_5718498 0.51 AT5G17350.1
hypothetical protein
Chr1_-_5645443 0.51 AT1G16510.1
SAUR-like auxin-responsive protein family
Chr2_+_17945662 0.51 AT2G43150.1
Proline-rich extensin-like family protein
Chr4_-_947075 0.51 AT4G02130.2
AT4G02130.3
galacturonosyltransferase 6
Chr4_-_8307934 0.51 AT4G14440.1
3-hydroxyacyl-CoA dehydratase 1
Chr4_+_16091535 0.51 AT4G33440.1
Pectin lyase-like superfamily protein
Chr1_+_10244453 0.51 AT1G29290.1
B-cell lymphoma 6 protein
Chr3_-_1864566 0.51 AT3G06150.1
cytochrome P450 family protein
Chr5_+_22808641 0.51 AT5G56320.2
AT5G56320.1
AT5G56320.3
expansin A14
Chr5_+_16161449 0.50 AT5G40390.1
Raffinose synthase family protein
Chr3_-_21499943 0.50 AT3G58060.1
Cation efflux family protein
Chr3_-_22256177 0.50 AT3G60220.1
TOXICOS EN LEVADURA 4
Chr3_+_3186038 0.49 AT3G10300.6
Calcium-binding EF-hand family protein
Chr5_-_5310951 0.49 AT5G16250.1
transmembrane protein
Chr2_+_7666548 0.49 AT2G17630.1
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr4_+_15819489 0.49 AT4G32800.1
Integrase-type DNA-binding superfamily protein
Chr4_+_9556783 0.49 AT4G16980.1
arabinogalactan-protein family
Chr1_-_25065446 0.49 AT1G67110.1
AT1G67110.2
cytochrome P450, family 735, subfamily A, polypeptide 2
Chr5_+_25703649 0.49 AT5G64260.1
EXORDIUM like 2
Chr1_+_27681358 0.49 AT1G73620.1
Pathogenesis-related thaumatin superfamily protein
Chr3_+_5692607 0.48 AT3G16720.1
TOXICOS EN LEVADURA 2
Chr2_+_7275657 0.48 AT2G16760.1
Calcium-dependent phosphotriesterase superfamily protein
Chr3_-_22501239 0.48 AT3G60900.1
FASCICLIN-like arabinogalactan-protein 10
Chr1_-_22871298 0.48 AT1G61890.3
AT1G61890.1
AT1G61890.2
MATE efflux family protein
Chr1_+_28291698 0.48 AT1G75390.1
AT1G75390.2
basic leucine-zipper 44
Chr5_+_3423381 0.48 AT5G10830.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_-_18883033 0.48 AT3G50800.1
hypothetical protein
Chr3_-_21499676 0.48 AT3G58060.2
Cation efflux family protein
Chr3_-_5445329 0.48 AT3G16050.1
pyridoxine biosynthesis 1.2
Chr2_+_11566288 0.48 AT2G27080.1
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr5_+_4826141 0.48 AT5G14920.1
AT5G14920.2
Gibberellin-regulated family protein
Chr4_+_18576216 0.48 AT4G40070.1
RING/U-box superfamily protein
Chr4_-_9754161 0.48 AT4G17490.1
ethylene responsive element binding factor 6
Chr3_+_3698658 0.48 AT3G11700.1
FASCICLIN-like arabinogalactan protein 18 precursor
Chr1_+_7911843 0.47 AT1G22410.1
Class-II DAHP synthetase family protein
Chr5_-_22239187 0.47 AT5G54740.1
seed storage albumin 5
Chr5_+_14912659 0.47 AT5G37540.1
Eukaryotic aspartyl protease family protein
Chr2_+_14216771 0.47 AT2G33570.1
glycosyltransferase family protein (DUF23)
Chr3_+_5535124 0.47 AT3G16330.1
Avr9/Cf-9 rapidly elicited protein
Chr2_-_7153430 0.47 AT2G16500.1
arginine decarboxylase 1
Chr3_-_22811024 0.47 AT3G61640.1
arabinogalactan protein 20
Chr4_+_9698940 0.46 AT4G17340.1
tonoplast intrinsic protein 2;2
Chr5_-_20940895 0.46 AT5G51550.1
EXORDIUM like 3
Chr1_-_17983377 0.46 AT1G48630.1
receptor for activated C kinase 1B
Chr3_+_2365301 0.46 AT3G07390.1
AT3G07390.2
auxin-induced in root cultures-like protein
Chr5_-_23304095 0.46 AT5G57540.1
xyloglucan endotransglucosylase/hydrolase 13
Chr5_-_37999 0.46 AT5G01100.1
O-fucosyltransferase family protein
Chr1_+_618061 0.46 AT1G02810.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr4_-_947249 0.46 AT4G02130.1
galacturonosyltransferase 6
Chr2_-_15186852 0.46 AT2G36210.1
SAUR-like auxin-responsive protein family
Chr5_-_21619281 0.46 AT5G53290.1
cytokinin response factor 3
Chr5_-_23207926 0.46 AT5G57290.3
AT5G57290.2
AT5G57290.1
60S acidic ribosomal protein family
Chr2_-_17818545 0.46 AT2G42820.1
HVA22-like protein F
Chr1_-_5765798 0.45 AT1G16850.1
transmembrane protein
Chr1_-_1122786 0.45 AT1G04220.1
3-ketoacyl-CoA synthase 2
Chr5_-_8406132 0.45 AT5G24570.1
AT5G24575.1
hypothetical protein
hypothetical protein
Chr1_-_27865694 0.45 AT1G74100.1
sulfotransferase 16
Chr3_-_19467455 0.45 AT3G52500.1
Eukaryotic aspartyl protease family protein
Chr2_+_19686333 0.45 AT2G48140.1
AT2G48140.2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_4533119 0.45 AT5G14040.1
phosphate transporter 3;1
Chr1_+_26423874 0.44 AT1G70170.1
matrix metalloproteinase
Chr1_-_7040231 0.44 AT1G20330.1
sterol methyltransferase 2
Chr5_-_442187 0.44 AT5G02220.1
cyclin-dependent kinase inhibitor
Chr4_+_14835792 0.44 AT4G30320.1
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr4_+_5792137 0.44 AT4G09030.1
arabinogalactan protein 10
Chr1_+_10991478 0.44 AT1G30870.1
Peroxidase superfamily protein
Chr1_+_25926849 0.44 AT1G68945.1
hypothetical protein
Chr4_-_12147993 0.44 AT4G23200.2
AT4G23200.1
cysteine-rich RLK (RECEPTOR-like protein kinase) 12
Chr3_-_3585850 0.44 AT3G11410.1
protein phosphatase 2CA
Chr2_+_19469571 0.44 AT2G47440.2
AT2G47440.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_-_10267405 0.44 AT2G24150.2
heptahelical protein 3
Chr5_+_7676938 0.44 AT5G22940.2
glucuronoxylan glucuronosyltransferase, putative
Chr5_+_2803833 0.44 AT5G08640.1
AT5G08640.2
flavonol synthase 1
Chr2_-_10267607 0.43 AT2G24150.1
heptahelical protein 3
Chr2_-_19638678 0.43 AT2G47990.1
transducin family protein / WD-40 repeat family protein
Chr4_+_11006815 0.43 AT4G20390.1
Uncharacterized protein family (UPF0497)
Chr5_+_23100516 0.43 AT5G57090.1
AT5G57090.2
Auxin efflux carrier family protein
Chr5_+_7676662 0.43 AT5G22940.1
glucuronoxylan glucuronosyltransferase, putative
Chr4_+_7210807 0.43 AT4G12030.4
AT4G12030.3
AT4G12030.2
AT4G12030.1
bile acid transporter 5
Chr4_-_13019400 0.43 AT4G25480.1
dehydration response element B1A
Chr2_+_801527 0.43 AT2G02810.1
UDP-galactose transporter 1
Chr2_-_15790139 0.43 AT2G37640.1
Barwin-like endoglucanases superfamily protein
Chr4_-_9250343 0.43 AT4G16370.1
oligopeptide transporter
Chr2_+_8940833 0.43 AT2G20750.2
AT2G20750.1
expansin B1
Chr2_+_19508929 0.42 AT2G47550.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_-_26114545 0.42 AT5G65340.1
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr1_-_9753952 0.42 AT1G27990.1
transmembrane protein
Chr3_-_22280691 0.42 AT3G60280.1
uclacyanin 3
Chr4_+_15490740 0.42 AT4G32030.2
hypothetical protein
Chr4_+_5668435 0.42 AT4G08868.1
hypothetical protein
Chr2_-_16042383 0.42 AT2G38290.2
AT2G38290.1
ammonium transporter 2
Chr5_+_25891449 0.42 AT5G64750.1
Integrase-type DNA-binding superfamily protein
Chr4_+_15490566 0.42 AT4G32030.1
hypothetical protein
Chr3_+_16271511 0.42 AT3G44720.1
arogenate dehydratase 4
Chr1_+_26814260 0.42 AT1G71100.1
Ribose 5-phosphate isomerase, type A protein
Chr1_+_789820 0.42 AT1G03230.1
Eukaryotic aspartyl protease family protein
Chr1_-_8961183 0.42 AT1G25510.1
Eukaryotic aspartyl protease family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G03800

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.6 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.3 0.9 GO:0015840 urea transport(GO:0015840)
0.3 0.9 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.3 1.0 GO:0006097 glyoxylate cycle(GO:0006097)
0.2 0.7 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.2 0.8 GO:0010500 transmitting tissue development(GO:0010500)
0.2 0.6 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.2 0.7 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.2 0.5 GO:0019406 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.2 0.6 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.1 0.4 GO:0050996 positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
0.1 0.6 GO:0006527 arginine catabolic process(GO:0006527)
0.1 0.4 GO:0040019 positive regulation of embryonic development(GO:0040019)
0.1 0.4 GO:0015696 ammonium transport(GO:0015696)
0.1 0.7 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 0.4 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.1 0.6 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 1.1 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 0.1 GO:0015729 oxaloacetate transport(GO:0015729)
0.1 0.4 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.1 1.3 GO:0031539 positive regulation of anthocyanin metabolic process(GO:0031539)
0.1 0.3 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.1 0.2 GO:0019401 alditol biosynthetic process(GO:0019401)
0.1 1.5 GO:0010274 hydrotropism(GO:0010274)
0.1 0.2 GO:0034625 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.1 2.8 GO:0010345 suberin biosynthetic process(GO:0010345)
0.1 0.7 GO:0016045 detection of bacterium(GO:0016045)
0.1 1.4 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 0.5 GO:0006272 leading strand elongation(GO:0006272)
0.1 0.4 GO:0048533 sporocyte differentiation(GO:0048533)
0.1 0.4 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.1 0.3 GO:0032196 transposition(GO:0032196)
0.1 0.3 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 0.4 GO:0010226 response to lithium ion(GO:0010226)
0.1 0.4 GO:0010338 leaf formation(GO:0010338)
0.1 0.3 GO:0048480 stigma development(GO:0048480)
0.1 1.1 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.3 GO:0090172 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.1 1.1 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.1 0.2 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.1 0.2 GO:0010198 synergid death(GO:0010198)
0.1 0.4 GO:1901568 icosanoid metabolic process(GO:0006690) fatty acid derivative metabolic process(GO:1901568)
0.1 0.5 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.1 0.3 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.1 0.2 GO:0010377 guard cell fate commitment(GO:0010377) regulation of G1/S transition of mitotic cell cycle(GO:2000045) regulation of genetic imprinting(GO:2000653)
0.1 0.2 GO:0009099 valine biosynthetic process(GO:0009099)
0.1 3.2 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 1.3 GO:0070298 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 0.7 GO:0009088 threonine biosynthetic process(GO:0009088)
0.1 1.1 GO:0048766 root hair initiation(GO:0048766)
0.1 0.4 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.1 1.3 GO:0006949 syncytium formation(GO:0006949)
0.1 0.4 GO:0019218 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.1 0.4 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.1 0.6 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.1 0.3 GO:1901334 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.1 0.7 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.1 0.2 GO:0043132 NAD transport(GO:0043132)
0.1 0.2 GO:0030638 polyketide metabolic process(GO:0030638)
0.1 0.3 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.1 0.3 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.1 0.9 GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway(GO:0009095)
0.1 0.2 GO:0015802 basic amino acid transport(GO:0015802)
0.1 0.3 GO:0010376 stomatal complex formation(GO:0010376)
0.1 0.2 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 2.0 GO:0042335 cuticle development(GO:0042335)
0.1 0.2 GO:0009660 amyloplast organization(GO:0009660)
0.1 1.0 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.1 0.2 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 2.7 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.1 0.1 GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.1 0.4 GO:0019079 viral genome replication(GO:0019079)
0.1 0.1 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 0.8 GO:0051865 protein autoubiquitination(GO:0051865)
0.1 0.2 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.1 0.4 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.1 0.5 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.1 0.2 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 0.3 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.1 0.3 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.2 GO:0031507 heterochromatin assembly(GO:0031507) regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.1 0.5 GO:0009799 specification of symmetry(GO:0009799)
0.1 0.5 GO:1902025 nitrate import(GO:1902025)
0.0 0.5 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.2 GO:0042989 sequestering of actin monomers(GO:0042989)
0.0 0.1 GO:0042908 xenobiotic transport(GO:0042908)
0.0 1.1 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.3 GO:0009650 UV protection(GO:0009650)
0.0 0.6 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 1.0 GO:0009901 anther dehiscence(GO:0009901)
0.0 0.2 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.0 0.3 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.3 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.0 0.3 GO:0048830 adventitious root development(GO:0048830)
0.0 0.2 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.0 1.3 GO:0010252 auxin homeostasis(GO:0010252)
0.0 0.6 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.6 GO:0015770 sucrose transport(GO:0015770)
0.0 0.1 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.0 0.3 GO:1902170 cellular response to nitrate(GO:0071249) cellular response to reactive nitrogen species(GO:1902170)
0.0 0.8 GO:0006833 water transport(GO:0006833) fluid transport(GO:0042044)
0.0 0.2 GO:0070141 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.0 0.2 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.2 GO:0002943 tRNA dihydrouridine synthesis(GO:0002943)
0.0 0.1 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.0 2.5 GO:0009631 cold acclimation(GO:0009631)
0.0 0.2 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.3 GO:0070129 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.0 0.6 GO:0006030 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.3 GO:0046473 phosphatidic acid metabolic process(GO:0046473)
0.0 0.2 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.0 0.2 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.5 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.1 GO:0006666 3-keto-sphinganine metabolic process(GO:0006666)
0.0 0.1 GO:1902975 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.0 0.8 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.1 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.0 0.1 GO:0010601 positive regulation of auxin biosynthetic process(GO:0010601) positive regulation of hormone metabolic process(GO:0032352) positive regulation of hormone biosynthetic process(GO:0046886) positive regulation of auxin metabolic process(GO:0090355)
0.0 0.2 GO:0009647 skotomorphogenesis(GO:0009647)
0.0 0.4 GO:0017157 regulation of exocytosis(GO:0017157)
0.0 0.2 GO:0071731 response to nitric oxide(GO:0071731)
0.0 0.4 GO:0010196 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.0 0.1 GO:0010353 response to trehalose(GO:0010353)
0.0 1.1 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.3 GO:0080086 stamen filament development(GO:0080086)
0.0 0.4 GO:0010206 photosystem II repair(GO:0010206)
0.0 0.3 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.6 GO:0031048 chromatin silencing by small RNA(GO:0031048)
0.0 0.3 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 0.9 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.2 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.0 0.3 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.0 0.3 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.0 0.3 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.0 0.4 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.0 0.2 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0 0.2 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.0 0.2 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.0 0.8 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 1.5 GO:0030198 extracellular matrix organization(GO:0030198) extracellular structure organization(GO:0043062)
0.0 0.1 GO:0072501 cyclic nucleotide biosynthetic process(GO:0009190) cyclic purine nucleotide metabolic process(GO:0052652) cellular divalent inorganic anion homeostasis(GO:0072501)
0.0 0.1 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.0 0.4 GO:0016577 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.0 0.4 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.1 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.0 1.8 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.1 GO:2000068 regulation of defense response to insect(GO:2000068)
0.0 0.4 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 0.5 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 0.1 GO:0005980 glycogen catabolic process(GO:0005980)
0.0 0.8 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.1 GO:0048451 petal formation(GO:0048451)
0.0 0.1 GO:0006022 aminoglycan metabolic process(GO:0006022)
0.0 0.2 GO:0080144 amino acid homeostasis(GO:0080144)
0.0 0.2 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.1 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.0 0.1 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.0 0.4 GO:0009299 mRNA transcription(GO:0009299)
0.0 2.6 GO:0080167 response to karrikin(GO:0080167)
0.0 0.1 GO:0034059 response to anoxia(GO:0034059)
0.0 0.1 GO:1900034 regulation of cellular response to heat(GO:1900034)
0.0 0.3 GO:0007584 response to nutrient(GO:0007584)
0.0 0.8 GO:0010193 response to ozone(GO:0010193)
0.0 0.1 GO:0015868 ADP transport(GO:0015866) ATP transport(GO:0015867) purine ribonucleotide transport(GO:0015868) AMP transport(GO:0080121)
0.0 0.2 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.1 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.0 0.2 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 0.1 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.0 0.3 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.1 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.0 0.2 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.0 0.2 GO:0052317 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.0 0.6 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.2 GO:0009061 anaerobic respiration(GO:0009061)
0.0 0.2 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.0 0.0 GO:0007349 cellularization(GO:0007349)
0.0 1.0 GO:0048825 cotyledon development(GO:0048825)
0.0 0.1 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.0 1.5 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 0.2 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.1 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)
0.0 0.2 GO:0072505 phosphate ion homeostasis(GO:0055062) divalent inorganic anion homeostasis(GO:0072505) trivalent inorganic anion homeostasis(GO:0072506)
0.0 0.2 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 1.6 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.0 GO:0006106 fumarate metabolic process(GO:0006106)
0.0 0.1 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.4 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 1.8 GO:0000160 phosphorelay signal transduction system(GO:0000160)
0.0 0.0 GO:0006490 oligosaccharide-lipid intermediate biosynthetic process(GO:0006490)
0.0 0.1 GO:0031929 TOR signaling(GO:0031929)
0.0 0.2 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 0.1 GO:0055047 generative cell mitosis(GO:0055047)
0.0 0.9 GO:0009846 pollen germination(GO:0009846)
0.0 0.4 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.1 GO:0046208 spermine catabolic process(GO:0046208)
0.0 0.5 GO:0099518 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.1 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.0 0.1 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 0.1 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.1 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 0.1 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.0 0.2 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.5 GO:0010582 floral meristem determinacy(GO:0010582)
0.0 0.2 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.0 0.2 GO:0010229 inflorescence development(GO:0010229)
0.0 0.3 GO:0009825 multidimensional cell growth(GO:0009825)
0.0 0.4 GO:0051225 spindle assembly(GO:0051225)
0.0 0.4 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.5 GO:0009926 auxin polar transport(GO:0009926)
0.0 0.1 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.2 GO:0007052 mitotic spindle organization(GO:0007052)
0.0 0.1 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.0 0.0 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.0 0.1 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.0 0.2 GO:0051567 histone H3-K9 methylation(GO:0051567)
0.0 1.4 GO:0010200 response to chitin(GO:0010200)
0.0 0.0 GO:0019985 translesion synthesis(GO:0019985)
0.0 0.2 GO:0010440 stomatal lineage progression(GO:0010440)
0.0 0.9 GO:0009561 megagametogenesis(GO:0009561)
0.0 0.0 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.0 0.5 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 0.2 GO:0034394 protein localization to cell surface(GO:0034394) regulation of protein localization to cell surface(GO:2000008)
0.0 0.1 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.1 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.0 0.3 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.2 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.0 0.3 GO:0019915 lipid storage(GO:0019915)
0.0 0.4 GO:1901800 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.0 0.1 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.0 0.0 GO:0010351 lithium ion transport(GO:0010351)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0009514 glyoxysome(GO:0009514)
0.3 0.8 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 1.3 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.3 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.1 0.3 GO:0009501 amyloplast(GO:0009501)
0.1 0.3 GO:0043673 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.1 0.2 GO:0009897 external side of plasma membrane(GO:0009897)
0.1 21.2 GO:0031225 anchored component of membrane(GO:0031225)
0.1 1.0 GO:0005801 cis-Golgi network(GO:0005801)
0.1 0.3 GO:0042788 polysomal ribosome(GO:0042788)
0.1 0.4 GO:0090395 plant cell papilla(GO:0090395)
0.1 0.2 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 0.3 GO:0005687 U4 snRNP(GO:0005687)
0.0 0.2 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.0 0.3 GO:0000798 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.0 0.4 GO:0030139 endocytic vesicle(GO:0030139)
0.0 0.4 GO:0009517 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.0 0.3 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.0 0.5 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 0.3 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.0 0.3 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.5 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.1 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.0 0.4 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.0 0.1 GO:0030874 nucleolar chromatin(GO:0030874)
0.0 0.2 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 0.5 GO:0016459 myosin complex(GO:0016459)
0.0 0.4 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.3 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 0.0 GO:0016328 lateral plasma membrane(GO:0016328)
0.0 4.4 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.3 GO:0045275 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 0.3 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.2 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.1 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.0 0.2 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.6 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.9 GO:0005811 lipid particle(GO:0005811)
0.0 1.6 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.1 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.3 GO:0071011 precatalytic spliceosome(GO:0071011)
0.0 0.1 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 0.1 GO:0035619 root hair(GO:0035618) root hair tip(GO:0035619)
0.0 0.1 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 0.3 GO:0000347 THO complex(GO:0000347)
0.0 0.1 GO:0031931 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.0 0.7 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.1 GO:0000439 core TFIIH complex(GO:0000439)
0.0 0.1 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 0.1 GO:0000813 ESCRT I complex(GO:0000813)
0.0 1.1 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.4 GO:0000145 exocyst(GO:0000145)
0.0 1.0 GO:0005615 extracellular space(GO:0005615)
0.0 0.1 GO:0001673 male germ cell nucleus(GO:0001673)
0.0 0.1 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.7 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.5 1.6 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.5 1.8 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.3 0.9 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.3 0.3 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.2 0.7 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.2 0.7 GO:0015131 oxaloacetate transmembrane transporter activity(GO:0015131)
0.2 0.4 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.2 0.6 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.2 0.8 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.2 0.5 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.2 0.5 GO:0035591 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.2 1.2 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.2 0.2 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.2 0.6 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 0.7 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.1 0.6 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.1 0.4 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.1 0.4 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
0.1 0.3 GO:0052736 beta-glucanase activity(GO:0052736)
0.1 0.7 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 0.4 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.1 0.4 GO:0000248 C-5 sterol desaturase activity(GO:0000248)
0.1 0.9 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 0.5 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.1 0.4 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.1 0.4 GO:0051738 xanthophyll binding(GO:0051738)
0.1 1.1 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 0.5 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.1 1.0 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 3.1 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.4 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.1 0.4 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.1 0.3 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.1 2.0 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.3 GO:0004774 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.1 0.6 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.5 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.4 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.1 1.9 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 1.4 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.2 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 1.0 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.1 0.6 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 2.3 GO:0005179 hormone activity(GO:0005179)
0.1 0.5 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.1 0.4 GO:0004126 cytidine deaminase activity(GO:0004126)
0.1 0.3 GO:0004129 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.1 0.2 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 0.6 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.1 0.4 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.8 GO:0002020 protease binding(GO:0002020)
0.1 0.4 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.4 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.7 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.1 0.4 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 0.4 GO:0019825 oxygen binding(GO:0019825)
0.1 0.4 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.1 0.5 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.3 GO:0034511 U3 snoRNA binding(GO:0034511)
0.1 0.5 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 0.4 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.3 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.0 0.3 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.2 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.0 0.3 GO:0008494 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.0 0.8 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.0 0.2 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.0 0.4 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.0 0.2 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.6 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.3 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.7 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.0 0.2 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 1.3 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.1 GO:0016649 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.0 1.0 GO:0008810 cellulase activity(GO:0008810)
0.0 0.2 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.1 GO:0047560 3-dehydrosphinganine reductase activity(GO:0047560)
0.0 1.8 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.1 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.0 0.1 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.0 0.2 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.0 0.1 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.0 0.8 GO:0008378 galactosyltransferase activity(GO:0008378)
0.0 0.3 GO:0010011 auxin binding(GO:0010011)
0.0 0.3 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 2.2 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.3 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 0.2 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 0.2 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.3 GO:0035198 miRNA binding(GO:0035198)
0.0 0.1 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.0 0.1 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.0 0.3 GO:0048256 flap endonuclease activity(GO:0048256)
0.0 0.2 GO:0015210 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.0 0.1 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.0 0.1 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.0 0.5 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.0 0.6 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.1 GO:0008517 folic acid transporter activity(GO:0008517)
0.0 0.3 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.1 GO:0033613 activating transcription factor binding(GO:0033613)
0.0 0.2 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.0 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.0 0.1 GO:0015101 organic cation transmembrane transporter activity(GO:0015101) AMP transmembrane transporter activity(GO:0080122)
0.0 0.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.3 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.0 0.2 GO:0019238 cyclohydrolase activity(GO:0019238)
0.0 0.1 GO:0004031 aldehyde oxidase activity(GO:0004031)
0.0 0.8 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.1 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.0 0.3 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 1.6 GO:0019901 protein kinase binding(GO:0019901)
0.0 0.2 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.0 0.2 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.0 0.2 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
0.0 0.8 GO:0000295 adenine nucleotide transmembrane transporter activity(GO:0000295)
0.0 0.1 GO:0048038 quinone binding(GO:0048038)
0.0 1.7 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 0.4 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 1.3 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 0.2 GO:0004003 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 1.0 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.3 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.6 GO:0036442 hydrogen-exporting ATPase activity(GO:0036442)
0.0 0.1 GO:0016040 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.0 0.2 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.0 0.3 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.2 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.4 GO:0008514 organic anion transmembrane transporter activity(GO:0008514)
0.0 0.5 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.0 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.0 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.0 0.1 GO:0004661 protein geranylgeranyltransferase activity(GO:0004661)
0.0 1.8 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.1 GO:0051740 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 0.2 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 1.7 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.8 GO:0070008 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.0 0.2 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.1 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.2 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.2 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.1 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.9 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.0 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.0 0.2 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.6 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.2 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.1 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.1 GO:0046592 polyamine oxidase activity(GO:0046592)
0.0 0.2 GO:0031543 peptidyl-proline dioxygenase activity(GO:0031543)
0.0 0.4 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 0.6 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.0 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 1.4 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.1 GO:0047627 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.0 0.1 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.1 GO:0031078 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.4 GO:0016838 carbon-oxygen lyase activity, acting on phosphates(GO:0016838)
0.0 0.1 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.0 GO:0047912 galacturonokinase activity(GO:0047912)
0.0 0.1 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.1 0.5 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.1 0.5 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.1 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.0 0.3 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.0 0.1 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.0 0.2 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.0 0.1 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.0 0.1 PID CMYB PATHWAY C-MYB transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.1 0.2 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.1 0.2 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.1 0.6 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.1 0.3 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.1 0.4 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.0 0.1 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.0 0.4 REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION Genes involved in Platelet activation, signaling and aggregation
0.0 0.3 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.1 REACTOME MRNA PROCESSING Genes involved in mRNA Processing
0.0 0.1 REACTOME G1 PHASE Genes involved in G1 Phase
0.0 0.1 REACTOME BIOLOGICAL OXIDATIONS Genes involved in Biological oxidations
0.0 0.3 REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S Genes involved in Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S
0.0 0.2 REACTOME HEMOSTASIS Genes involved in Hemostasis
0.0 0.1 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.0 0.1 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis