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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G02230

Z-value: 1.29

Transcription factors associated with AT1G02230

Gene Symbol Gene ID Gene Info
AT1G02230
AT1G02230 NAC domain containing protein 4

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC004arTal_v1_Chr1_-_436922_436922-0.117.1e-01Click!

Activity profile of AT1G02230 motif

Sorted Z-values of AT1G02230 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_+_18346306 2.02 AT2G44460.1
BGLU28
beta glucosidase 28
Chr2_+_18347765 1.99 AT2G44460.2
BGLU28
beta glucosidase 28
Chr4_+_2189515 1.36 AT4G04410.1
AT4G04410

Chr1_+_24472873 1.22 AT1G65800.1
AT1G65800.2
RK2
receptor kinase 2
Chr5_-_6850237 1.20 AT5G20280.1
SPS1F
sucrose phosphate synthase 1F
Chr1_-_27994178 1.17 AT1G74480.1
RKD2
RWP-RK domain-containing protein
Chr5_-_8160343 1.14 AT5G24120.2
AT5G24120.1
SIGE
sigma factor E
Chr3_+_8918679 1.14 AT3G24500.2
MBF1C
multiprotein bridging factor 1C
Chr5_-_4430901 1.07 AT5G13730.1
SIG4
sigma factor 4
Chr3_+_8918267 1.07 AT3G24500.1
MBF1C
multiprotein bridging factor 1C
Chr1_-_22977625 1.06 AT1G62180.2
APR2
5'adenylylphosphosulfate reductase 2
Chr4_+_1292483 1.05 AT4G02920.1
AT4G02920.2
AT4G02920
hypothetical protein
Chr1_-_22977885 1.05 AT1G62180.1
APR2
5'adenylylphosphosulfate reductase 2
Chr5_-_8160163 1.04 AT5G24120.3
SIGE
sigma factor E
Chr2_-_15412064 1.03 AT2G36750.1
UGT73C1
UDP-glucosyl transferase 73C1
Chr4_-_7406994 1.03 AT4G12480.1
EARLI1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_24595544 1.02 AT1G66060.1
AT1G66060
hypothetical protein (DUF577)
Chr5_+_19005547 1.00 AT5G46840.1
AT5G46840.2
AT5G46840
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr3_+_16818347 1.00 AT3G45780.2
PHOT1
phototropin 1
Chr4_+_11150049 1.00 AT4G20820.1
AT4G20820
FAD-binding Berberine family protein
Chr3_-_9642779 0.98 AT3G26310.1
CYP71B35
cytochrome P450, family 71, subfamily B, polypeptide 35
Chr3_+_16816721 0.98 AT3G45780.1
PHOT1
phototropin 1
Chr2_-_15425129 0.97 AT2G36800.1
DOGT1
don-glucosyltransferase 1
Chr3_+_16525245 0.97 AT3G45140.1
AT3G45140.2
LOX2
lipoxygenase 2
Chr3_-_3282131 0.96 AT3G10525.1
LGO
LOSS OF GIANT CELLS FROM ORGANS
Chr5_+_17526660 0.96 AT5G43630.2
AT5G43630.1
AT5G43630.3
AT5G43630.4
TZP
zinc knuckle (CCHC-type) family protein
Chr3_-_9580086 0.95 AT3G26180.2
AT3G26180.1
CYP71B20
cytochrome P450, family 71, subfamily B, polypeptide 20
Chr1_+_8395466 0.95 AT1G23730.2
AT1G23730.1
BCA3
beta carbonic anhydrase 3
Chr2_-_12415661 0.94 AT2G28900.1
OEP16-1
outer plastid envelope protein 16-1
Chr5_+_9261479 0.94 AT5G26570.1
AT5G26570.2
PWD
chloroplastidic phosphoglucan, water dikinase (ATGWD3)
Chr4_+_12310885 0.94 AT4G23600.2
CORI3
Tyrosine transaminase family protein
Chr4_+_12310619 0.94 AT4G23600.3
CORI3
Tyrosine transaminase family protein
Chr4_+_12524186 0.94 AT4G24120.1
YSL1
YELLOW STRIPE like 1
Chr3_-_17133462 0.94 AT3G46530.1
RPP13
NB-ARC domain-containing disease resistance protein
Chr5_-_5177897 0.93 AT5G15850.1
COL1
CONSTANS-like 1
Chr5_+_23167774 0.93 AT5G57180.1
AT5G57180.2
AT5G57180.4
AT5G57180.3
CIA2
chloroplast import apparatus 2
Chr4_+_12310379 0.93 AT4G23600.1
CORI3
Tyrosine transaminase family protein
Chr1_-_28194068 0.92 AT1G75100.1
JAC1
J-domain protein required for chloroplast accumulation response 1
Chr4_+_15202288 0.92 AT4G31330.1
AT4G31330
transmembrane protein, putative (Protein of unknown function, DUF599)
Chr3_-_9634470 0.92 AT3G26290.1
CYP71B26
cytochrome P450, family 71, subfamily B, polypeptide 26
Chr5_-_17629363 0.91 AT5G43850.1
ARD4
RmlC-like cupins superfamily protein
Chr5_+_18444607 0.90 AT5G45510.2
AT5G45510.1
AT5G45510
Leucine-rich repeat (LRR) family protein
Chr5_-_5018347 0.90 AT5G15450.1
CLPB3
casein lytic proteinase B3
Chr1_-_26770175 0.90 AT1G71000.1
AT1G71000.2
AT1G71000
Chaperone DnaJ-domain superfamily protein
Chr4_+_2324878 0.90 AT4G04610.1
APR1
APS reductase 1
Chr3_-_18718396 0.89 AT3G50440.1
MES10
methylesterase
Chr4_-_10325816 0.89 AT4G18810.2
AT4G18810.1
AT4G18810
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_23818481 0.88 AT1G64170.1
CHX16
cation/H+ exchanger 16
Chr3_-_9634822 0.88 AT3G26290.2
CYP71B26
cytochrome P450, family 71, subfamily B, polypeptide 26
Chr4_-_5932475 0.88 AT4G09350.1
NdhT
Chaperone DnaJ-domain superfamily protein
Chr5_+_22467337 0.87 AT5G55450.1
AT5G55450
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_-_11806087 0.87 AT2G27680.1
AT2G27680
NAD(P)-linked oxidoreductase superfamily protein
Chr1_+_5946448 0.86 AT1G17360.1
AT1G17360
LOW protein: protein phosphatase 1 regulatory subunit-like protein
Chr3_-_20813046 0.86 AT3G56080.2
AT3G56080.1
AT3G56080
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_13828422 0.86 AT4G27710.2
CYP709B3
cytochrome P450, family 709, subfamily B, polypeptide 3
Chr1_+_21887588 0.86 AT1G59590.1
ZCF37
ZCF37
Chr3_+_17228642 0.86 AT3G46780.1
PTAC16
plastid transcriptionally active 16
Chr4_+_13828189 0.86 AT4G27710.1
CYP709B3
cytochrome P450, family 709, subfamily B, polypeptide 3
Chr5_-_3595003 0.85 AT5G11260.2
AT5G11260.1
HY5
Basic-leucine zipper (bZIP) transcription factor family protein
Chr2_+_19232607 0.85 AT2G46790.3
AT2G46790.4
AT2G46790.1
AT2G46790.2
AT2G46790.5
PRR9
pseudo-response regulator 9
Chr1_+_26452847 0.83 AT1G70250.1
AT1G70250
receptor serine/threonine kinase
Chr5_-_22500564 0.83 AT5G55540.2
AT5G55540.1
TRN1
tornado 1
Chr2_+_17582673 0.82 AT2G42190.2
AT2G42190.1
AT2G42190.3
AT2G42190
rho GTPase-activating gacO-like protein
Chr1_+_27190036 0.82 AT1G72240.1
AT1G72240
hypothetical protein
Chr3_+_7812861 0.82 AT3G22150.2
AT3G22150.1
AT3G22150
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_+_17057388 0.82 AT2G40880.1
CYSA
cystatin A
Chr3_+_6191461 0.81 AT3G18080.1
BGLU44
B-S glucosidase 44
Chr2_+_11135624 0.81 AT2G26150.2
AT2G26150.1
AT2G26150.4
AT2G26150.3
HSFA2
heat shock transcription factor A2
Chr1_-_12224000 0.81 AT1G33720.5
AT1G33720.1
AT1G33720.3
AT1G33720.2
AT1G33720.4
CYP76C6
cytochrome P450, family 76, subfamily C, polypeptide 6
Chr5_-_648538 0.80 AT5G02830.1
AT5G02830
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_6802282 0.80 AT5G20150.1
SPX1
SPX domain-containing protein 1
Chr5_+_23940745 0.80 AT5G59350.1
AT5G59350.2
AT5G59350.3
AT5G59350
transmembrane protein
Chr1_-_28302728 0.80 AT1G75410.3
AT1G75410.1
BLH3
BEL1-like homeodomain 3
Chr5_+_6566271 0.80 AT5G19470.1
AT5G19470.2
NUDT24
nudix hydrolase homolog 24
Chr4_+_8708841 0.79 AT4G15248.1
BBX30
B-box type zinc finger family protein
Chr5_-_4392227 0.79 AT5G13630.2
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
Chr3_-_21008064 0.79 AT3G56710.1
AT3G56710.2
SIB1
sigma factor binding protein 1
Chr5_-_4392429 0.79 AT5G13630.1
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
Chr4_-_433938 0.79 AT4G01000.2
AT4G01000.1
AT4G01000
Ubiquitin-like superfamily protein
Chr1_+_23185760 0.79 AT1G62630.1
AT1G62630
Disease resistance protein (CC-NBS-LRR class) family
Chr5_+_16711042 0.79 AT5G41761.1
AT5G41761
hypothetical protein
Chr2_+_12326808 0.78 AT2G28720.1
AT2G28720
Histone superfamily protein
Chr3_-_5358427 0.78 AT3G15840.4
AT3G15840.2
AT3G15840.3
AT3G15840.5
AT3G15840.1
PIFI
post-illumination chlorophyll fluorescence increase
Chr5_-_5788291 0.78 AT5G17550.2
AT5G17550.1
PEX19-2
peroxin 19-2
Chr1_-_3396953 0.78 AT1G10360.1
GSTU18
glutathione S-transferase TAU 18
Chr3_+_20636607 0.78 AT3G55630.4
AT3G55630.3
AT3G55630.1
AT3G55630.2
AT3G55630.6
AT3G55630.5
DFD
DHFS-FPGS homolog D
Chr5_-_22115539 0.77 AT5G54470.1
BBX29
B-box type zinc finger family protein
Chr2_+_9254378 0.77 AT2G21640.1
AT2G21640
marker for oxidative stress response protein
Chr4_-_7553332 0.76 AT4G12910.2
AT4G12910.1
scpl20
serine carboxypeptidase-like 20
Chr4_+_8839256 0.76 AT4G15450.1
AT4G15450.2
AT4G15450
Senescence/dehydration-associated protein-like protein
Chr5_-_18026077 0.76 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr3_+_23211287 0.76 AT3G62740.2
AT3G62740.1
BGLU7
beta glucosidase 7
Chr3_-_17537546 0.75 AT3G47590.2
AT3G47590.1
AT3G47590
alpha/beta-Hydrolases superfamily protein
Chr1_-_6860376 0.75 AT1G19835.1
AT1G19835.4
AT1G19835.6
AT1G19835.3
AT1G19835
filament-like protein (DUF869)
Chr1_-_13900831 0.75 AT1G36730.1
AT1G36730
Translation initiation factor IF2/IF5
Chr1_+_6763765 0.75 AT1G19530.1
AT1G19530.2
AT1G19530
DNA polymerase epsilon catalytic subunit A
Chr1_-_130570 0.75 AT1G01320.1
AT1G01320.3
AT1G01320.2
AT1G01320
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_23974458 0.75 AT5G59450.1
AT5G59450
GRAS family transcription factor
Chr2_+_11299169 0.75 AT2G26570.2
WEB1
WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827)
Chr2_-_14810164 0.74 AT2G35130.1
AT2G35130.3
AT2G35130.2
AT2G35130
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_18850645 0.74 AT5G46490.3
AT5G46490.4
AT5G46490.5
AT5G46490.6
AT5G46490.7
AT5G46490.1
AT5G46490.8
AT5G46490.2
AT5G46490
Disease resistance protein (TIR-NBS-LRR class) family
Chr1_+_29815470 0.74 AT1G79270.1
AT1G79270.3
AT1G79270.2
AT1G79270.4
ECT8
evolutionarily conserved C-terminal region 8
Chr3_-_9646093 0.74 AT3G26320.1
CYP71B36
cytochrome P450, family 71, subfamily B, polypeptide 36
Chr3_-_1763348 0.74 AT3G05900.2
AT3G05900
neurofilament protein-like protein
Chr4_-_17835017 0.74 AT4G37930.1
SHM1
serine transhydroxymethyltransferase 1
Chr1_+_19806263 0.73 AT1G53160.1
AT1G53160.2
AT1G53160.3
SPL4
squamosa promoter binding protein-like 4
Chr1_+_5580821 0.73 AT1G16320.1
AT1G16320
plant/protein (DUF2358)
Chr1_-_5265103 0.73 AT1G15290.2
AT1G15290.1
AT1G15290
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_4855287 0.73 AT1G14200.1
AT1G14200
RING/U-box superfamily protein
Chr4_-_10647079 0.73 AT4G19520.1
AT4G19520.3
AT4G19520.2
AT4G19520.5
AT4G19520.4
AT4G19520
disease resistance protein (TIR-NBS-LRR class) family
Chr1_+_17847042 0.73 AT1G48300.1
DGAT3
diacylglycerol acyltransferase
Chr5_-_17199793 0.72 AT5G42900.1
AT5G42900.3
AT5G42900.2
COR27
cold regulated protein 27
Chr1_-_6308010 0.72 AT1G18330.2
EPR1
Homeodomain-like superfamily protein
Chr1_-_28302571 0.72 AT1G75410.2
BLH3
BEL1-like homeodomain 3
Chr1_-_17238185 0.72 AT1G46480.1
AT1G46480.2
WOX4
WUSCHEL related homeobox 4
Chr3_-_16598727 0.72 AT3G45260.2
AT3G45260.1
AT3G45260
C2H2-like zinc finger protein
Chr2_+_1966806 0.72 AT2G05380.1
AT2G05380.2
GRP3S
glycine-rich protein 3 short isoform
Chr2_-_7685176 0.72 AT2G17695.2
AT2G17695.1
AT2G17695.3
AT2G17695
outer envelope protein
Chr1_-_6308243 0.72 AT1G18330.1
EPR1
Homeodomain-like superfamily protein
Chr5_-_23230749 0.72 AT5G57345.1
AT5G57345
transmembrane protein
Chr2_+_12592129 0.72 AT2G29320.1
AT2G29320.2
AT2G29320.3
AT2G29320
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_+_8475101 0.72 AT4G14760.3
AT4G14760.1
NET1B
kinase interacting (KIP1-like) family protein
Chr1_-_29459493 0.71 AT1G78290.2
AT1G78290.3
SNRK2-8
Protein kinase superfamily protein
Chr5_-_18142147 0.71 AT5G44930.3
AT5G44930.1
AT5G44930.2
ARAD2
Exostosin family protein
Chr2_+_11298914 0.71 AT2G26570.1
WEB1
WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827)
Chr2_+_13814543 0.71 AT2G32540.1
CSLB04
cellulose synthase-like B4
Chr2_+_1966610 0.71 AT2G05380.3
GRP3S
glycine-rich protein 3 short isoform
Chr3_-_9640918 0.71 AT3G26300.1
CYP71B34
cytochrome P450, family 71, subfamily B, polypeptide 34
Chr3_-_21052286 0.70 AT3G56860.10
AT3G56860.5
AT3G56860.2
AT3G56860.11
AT3G56860.4
AT3G56860.3
AT3G56860.1
AT3G56860.6
AT3G56860.7
AT3G56860.8
AT3G56860.9
UBA2A
UBP1-associated protein 2A
Chr4_-_9061833 0.70 AT4G15990.1
AT4G15990
hypothetical protein
Chr1_-_24936512 0.70 AT1G66840.1
AT1G66840.2
PMI2
PLASTID MOVEMENT IMPAIRED protein (DUF827)
Chr4_+_8517100 0.70 AT4G14870.1
SECE1
secE/sec61-gamma protein transport protein
Chr3_-_6855513 0.70 AT3G19720.3
AT3G19720.2
AT3G19720.1
ARC5
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_-_28131077 0.70 AT1G74880.1
NdhO
NAD(P)H:plastoquinone dehydrogenase complex subunit O
Chr3_-_1108069 0.70 AT3G04210.1
AT3G04210
Disease resistance protein (TIR-NBS class)
Chr1_+_2034156 0.70 AT1G06645.1
AT1G06645
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_-_17458800 0.70 AT5G43450.2
AT5G43450
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_-_24963946 0.69 AT1G66910.1
AT1G66910.2
AT1G66910
Protein kinase superfamily protein
Chr1_+_24035941 0.69 AT1G64680.1
AT1G64680.2
AT1G64680
beta-carotene isomerase D27
Chr3_-_1108252 0.69 AT3G04210.2
AT3G04210
Disease resistance protein (TIR-NBS class)
Chr4_+_12299749 0.69 AT4G23570.2
AT4G23570.1
AT4G23570.3
SGT1A
phosphatase-like protein
Chr5_-_17458980 0.69 AT5G43450.1
AT5G43450
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_+_11568654 0.69 AT1G32160.1
AT1G32160
beta-casein (DUF760)
Chr3_+_20709294 0.68 AT3G55800.1
SBPASE
sedoheptulose-bisphosphatase
Chr3_+_613772 0.68 AT3G02830.1
AT3G02830.2
ZFN1
zinc finger protein 1
Chr5_+_4206738 0.68 AT5G13200.2
AT5G13200.1
AT5G13200
GRAM domain family protein
Chr5_-_3297373 0.68 AT5G10470.2
AT5G10470.1
KAC1
kinesin like protein for actin based chloroplast movement 1
Chr3_-_3684871 0.68 AT3G11670.1
DGD1
UDP-Glycosyltransferase superfamily protein
Chr3_-_19802328 0.68 AT3G53410.1
LUL2
RING/U-box superfamily protein
Chr5_-_22307561 0.67 AT5G54930.2
AT5G54930.1
AT5G54930
AT hook motif-containing protein
Chr4_-_7992429 0.67 AT4G13770.1
CYP83A1
cytochrome P450, family 83, subfamily A, polypeptide 1
Chr3_-_18684346 0.67 AT3G50370.1
AT3G50370.2
AT3G50370
hypothetical protein
Chr4_+_14321807 0.67 AT4G29070.1
AT4G29070.2
AT4G29070
Phospholipase A2 family protein
Chr1_+_19052193 0.67 AT1G51402.1
AT1G51402
hypothetical protein
Chr1_+_2707109 0.67 AT1G08550.2
NPQ1
non-photochemical quenching 1
Chr1_-_19458069 0.66 AT1G52240.1
ROPGEF11
rop guanine nucleotide exchange factor-like protein
Chr3_-_6325866 0.66 AT3G18420.1
AT3G18420
Protein prenylyltransferase superfamily protein
Chr1_-_149806 0.66 AT1G01390.1
AT1G01390.2
AT1G01390
UDP-Glycosyltransferase superfamily protein
Chr5_+_16468327 0.66 AT5G41140.1
AT5G41140.2
AT5G41140
Myosin heavy chain-related protein
Chr1_+_2706868 0.66 AT1G08550.3
AT1G08550.1
NPQ1
non-photochemical quenching 1
Chr5_-_1843872 0.66 AT5G06110.1
AT5G06110.2
AT5G06110
DnaJ and myb-like DNA-binding domain-containing protein
Chr2_+_12603767 0.66 AT2G29360.1
AT2G29360
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_11532199 0.66 AT1G32060.1
PRK
phosphoribulokinase
Chr5_-_24083528 0.66 AT5G59780.2
AT5G59780.1
AT5G59780.3
MYB59
myb domain protein 59
Chr4_-_1197630 0.66 AT4G02710.1
NET1C
Kinase interacting (KIP1-like) family protein
Chr5_-_22435134 0.66 AT5G55310.1
TOP1BETA
DNA topoisomerase 1 beta
Chr1_-_23716170 0.66 AT1G63880.2
AT1G63880.1
AT1G63880
Disease resistance protein (TIR-NBS-LRR class) family
Chr2_-_10113005 0.66 AT2G23760.3
AT2G23760.4
AT2G23760.1
BLH4
BEL1-like homeodomain 4
Chr5_-_24691095 0.65 AT5G61420.1
AT5G61420.2
MYB28
myb domain protein 28
Chr5_-_23523818 0.65 AT5G58130.1
ROS3
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr5_+_9984044 0.65 AT5G27950.2
AT5G27950.1
AT5G27950
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_-_10790553 0.65 AT3G28740.1
CYP81D11
Cytochrome P450 superfamily protein
Chr2_-_16664431 0.65 AT2G39920.4
AT2G39920.1
AT2G39920.3
AT2G39920.2
AT2G39920
HAD superfamily, subfamily IIIB acid phosphatase
Chr4_-_2673243 0.65 AT4G05180.1
AT4G05180.2
PSBQ-2
photosystem II subunit Q-2
Chr3_-_826585 0.65 AT3G03470.1
CYP89A9
cytochrome P450, family 87, subfamily A, polypeptide 9
Chr2_-_12625790 0.64 AT2G29450.1
GSTU5
glutathione S-transferase tau 5
Chr3_+_245416 0.64 AT3G01660.1
AT3G01660
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_+_11280319 0.64 AT3G29375.3
AT3G29375.2
AT3G29375
XH domain-containing protein
Chr1_+_24149208 0.64 AT1G65010.1
AT1G65010
WEB family protein (DUF827)
Chr2_+_13436485 0.64 AT2G31560.1
AT2G31560.3
AT2G31560.2
AT2G31560
signal transducer/transcription protein, putative (DUF1685)
Chr4_+_12945120 0.64 AT4G25300.1
AT4G25300.2
AT4G25300
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_+_10451403 0.64 AT3G28080.4
AT3G28080.3
AT3G28080.6
AT3G28080.7
AT3G28080.5
AT3G28080.1
AT3G28080.2
UMAMIT47
nodulin MtN21 /EamA-like transporter family protein
Chr2_-_9454270 0.63 AT2G22240.3
AT2G22240.1
MIPS2
myo-inositol-1-phosphate synthase 2
Chr3_-_20436453 0.63 AT3G55130.1
ABCG19
white-brown complex homolog 19
Chr5_-_13868362 0.63 AT5G35690.1
AT5G35690
zinc metalloproteinase-like protein
Chr4_+_9560078 0.63 AT4G16990.16
AT4G16990.17
AT4G16990.1
AT4G16990.3
AT4G16990.4
RLM3
disease resistance protein (TIR-NBS class)
Chr4_-_2481590 0.63 AT4G04890.2
PDF2
protodermal factor 2
Chr1_-_20719165 0.63 AT1G55490.1
AT1G55490.2
AT1G55490.4
AT1G55490.3
AT1G55490.5
CPN60B
chaperonin 60 beta
Chr1_+_26129551 0.63 AT1G69523.1
AT1G69523
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_-_6676520 0.63 AT3G19270.1
AT3G19270.2
CYP707A4
cytochrome P450, family 707, subfamily A, polypeptide 4
Chr1_-_687315 0.63 AT1G02990.2
AT1G02990.1
AT1G02990.6
AT1G02990.3
AT1G02990.4
AT1G02990.5
AT1G02990
hypothetical protein
Chr3_-_1044678 0.62 AT3G04030.2
AT3G04030.5
AT3G04030.1
AT3G04030.3
MYR2
Homeodomain-like superfamily protein
Chr4_-_11750698 0.62 AT4G22200.1
AT4G22200.2
KT2/3
potassium transport 2/3
Chr1_+_1553568 0.62 AT1G05320.1
AT1G05320.4
AT1G05320.3
AT1G05320.2
AT1G05320.6
AT1G05320.5
AT1G05320.7
AT1G05320
myosin heavy chain, embryonic smooth protein
Chr5_-_24537244 0.62 AT5G60970.1
TCP5
TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5
Chr4_-_468294 0.62 AT4G01080.1
TBL26
TRICHOME BIREFRINGENCE-LIKE 26
Chr1_+_27435306 0.62 AT1G72910.1
AT1G72910
Toll-Interleukin-Resistance (TIR) domain-containing protein
Chr1_-_27257081 0.62 AT1G72410.2
AT1G72410.1
AT1G72410
COP1-interacting protein-like protein
Chr1_-_2165261 0.61 AT1G07050.2
AT1G07050.1
AT1G07050
CCT motif family protein
Chr5_+_7116687 0.61 AT5G20960.2
AO1
aldehyde oxidase 1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G02230

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 3.0 GO:0019419 sulfate reduction(GO:0019419)
0.4 1.3 GO:0010028 xanthophyll cycle(GO:0010028)
0.4 2.0 GO:0010361 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.3 1.0 GO:0032990 cell part morphogenesis(GO:0032990) mitochondrion morphogenesis(GO:0070584)
0.3 1.0 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.3 2.9 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.3 1.0 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.3 1.2 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.3 0.9 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.3 1.4 GO:0042550 photosystem I stabilization(GO:0042550)
0.3 0.8 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.3 1.0 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.2 1.0 GO:0071836 nectar secretion(GO:0071836)
0.2 0.7 GO:0048255 mRNA stabilization(GO:0048255)
0.2 0.7 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.2 0.9 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.2 1.6 GO:0006021 inositol biosynthetic process(GO:0006021)
0.2 0.9 GO:0033306 phytol metabolic process(GO:0033306)
0.2 1.1 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.2 0.8 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.2 0.6 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.2 0.6 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.2 0.8 GO:0045046 protein import into peroxisome membrane(GO:0045046)
0.2 2.5 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.2 1.1 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.2 0.4 GO:0006057 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
0.2 0.5 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.2 0.5 GO:0032025 response to cobalt ion(GO:0032025)
0.2 1.2 GO:0090059 protoxylem development(GO:0090059)
0.2 1.2 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.2 1.2 GO:0006000 fructose metabolic process(GO:0006000)
0.2 4.1 GO:0010207 photosystem II assembly(GO:0010207)
0.2 0.7 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.2 0.8 GO:1901535 regulation of DNA demethylation(GO:1901535)
0.2 0.7 GO:0035865 cellular response to potassium ion(GO:0035865)
0.2 1.3 GO:0009061 anaerobic respiration(GO:0009061)
0.2 1.5 GO:0070370 cellular heat acclimation(GO:0070370)
0.2 0.6 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.2 0.8 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.2 3.7 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.2 0.6 GO:0030643 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.1 0.7 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.1 0.7 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.1 0.6 GO:0080005 photosystem stoichiometry adjustment(GO:0080005)
0.1 0.9 GO:0071267 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.1 0.6 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.1 1.9 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.1 0.6 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.1 0.9 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 0.5 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 0.1 GO:0050878 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.1 1.5 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.4 GO:0071494 cellular response to UV-C(GO:0071494)
0.1 0.2 GO:1903313 positive regulation of mRNA metabolic process(GO:1903313)
0.1 0.6 GO:0050482 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.1 1.7 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 1.0 GO:0031221 arabinan metabolic process(GO:0031221)
0.1 0.5 GO:0010618 aerenchyma formation(GO:0010618)
0.1 1.0 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.1 0.6 GO:0060151 peroxisome localization(GO:0060151)
0.1 1.1 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.1 0.3 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.1 1.1 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 2.2 GO:0000373 Group II intron splicing(GO:0000373)
0.1 0.5 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.1 0.5 GO:0018871 1-aminocyclopropane-1-carboxylate metabolic process(GO:0018871) 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 0.3 GO:0042407 mitochondrial protein processing(GO:0034982) cristae formation(GO:0042407)
0.1 0.2 GO:0009662 etioplast organization(GO:0009662)
0.1 0.5 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.1 0.5 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
0.1 0.7 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.1 0.4 GO:1901336 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.1 0.5 GO:0006788 heme oxidation(GO:0006788)
0.1 1.0 GO:0043486 histone exchange(GO:0043486)
0.1 0.5 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.1 0.7 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 1.2 GO:0016559 peroxisome fission(GO:0016559)
0.1 0.4 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.1 0.4 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 0.8 GO:0000967 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.1 1.0 GO:0010098 suspensor development(GO:0010098)
0.1 0.7 GO:0010067 procambium histogenesis(GO:0010067)
0.1 0.5 GO:0009558 embryo sac cellularization(GO:0009558)
0.1 1.6 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.1 0.5 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.1 0.4 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 0.1 GO:0006517 protein deglycosylation(GO:0006517)
0.1 0.7 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.1 0.5 GO:0031116 positive regulation of microtubule polymerization or depolymerization(GO:0031112) positive regulation of microtubule polymerization(GO:0031116)
0.1 0.3 GO:1901379 positive regulation of potassium ion transport(GO:0043268) regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.1 0.4 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.1 0.3 GO:0061013 regulation of mRNA catabolic process(GO:0061013)
0.1 0.4 GO:1902446 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 0.4 GO:0035494 SNARE complex disassembly(GO:0035494)
0.1 0.6 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.1 0.4 GO:1901002 positive regulation of response to salt stress(GO:1901002)
0.1 0.4 GO:0060149 negative regulation of posttranscriptional gene silencing(GO:0060149)
0.1 0.2 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.1 3.9 GO:0072598 protein localization to chloroplast(GO:0072598)
0.1 0.2 GO:0034247 snoRNA splicing(GO:0034247)
0.1 1.1 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.1 0.5 GO:0046368 GDP-L-fucose biosynthetic process(GO:0042350) GDP-L-fucose metabolic process(GO:0046368)
0.1 0.5 GO:0006598 polyamine catabolic process(GO:0006598)
0.1 0.5 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.9 GO:0050665 hydrogen peroxide biosynthetic process(GO:0050665)
0.1 0.2 GO:0046505 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.1 0.4 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 3.0 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.1 0.2 GO:0080182 simple leaf morphogenesis(GO:0060776) histone H3-K4 trimethylation(GO:0080182)
0.1 0.4 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 0.9 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.1 0.1 GO:0010288 response to lead ion(GO:0010288)
0.1 0.5 GO:0006775 fat-soluble vitamin metabolic process(GO:0006775) vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360) fat-soluble vitamin biosynthetic process(GO:0042362)
0.1 0.4 GO:0042391 regulation of membrane potential(GO:0042391)
0.1 0.2 GO:0007097 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023) nucleus localization(GO:0051647)
0.1 0.3 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.1 0.7 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.5 GO:0015800 acidic amino acid transport(GO:0015800)
0.1 1.4 GO:0009306 protein secretion(GO:0009306)
0.1 3.3 GO:0016145 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.4 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.1 0.2 GO:0006747 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.1 0.3 GO:0051176 positive regulation of sulfur metabolic process(GO:0051176)
0.1 0.3 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.1 4.0 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 0.6 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.1 0.7 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.1 1.3 GO:0005983 starch catabolic process(GO:0005983)
0.1 0.4 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.2 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.1 0.5 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.1 1.8 GO:0042026 protein refolding(GO:0042026)
0.1 0.2 GO:0015720 allantoin transport(GO:0015720)
0.1 0.6 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.1 0.3 GO:0009228 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.1 0.3 GO:0046493 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.1 0.6 GO:0036065 fucosylation(GO:0036065)
0.1 0.8 GO:0007050 cell cycle arrest(GO:0007050)
0.1 0.2 GO:0042256 mature ribosome assembly(GO:0042256)
0.1 0.2 GO:0071415 cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.1 1.3 GO:0006458 'de novo' protein folding(GO:0006458)
0.1 0.6 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.1 0.5 GO:0006491 N-glycan processing(GO:0006491)
0.1 0.3 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.1 1.1 GO:0015994 chlorophyll metabolic process(GO:0015994)
0.1 0.2 GO:0046443 FAD metabolic process(GO:0046443)
0.1 0.2 GO:1901562 response to paraquat(GO:1901562)
0.1 1.0 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.1 0.4 GO:0042727 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231) flavin-containing compound biosynthetic process(GO:0042727)
0.1 0.2 GO:0071244 cellular response to carbon dioxide(GO:0071244)
0.1 0.7 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.1 0.3 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.1 0.9 GO:0010257 NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.1 0.2 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.1 0.4 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.1 0.7 GO:0006265 DNA topological change(GO:0006265)
0.1 1.5 GO:0016575 histone deacetylation(GO:0016575)
0.1 0.2 GO:0046068 cGMP biosynthetic process(GO:0006182) cGMP metabolic process(GO:0046068)
0.1 0.2 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.0 0.9 GO:0009638 phototropism(GO:0009638)
0.0 0.5 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.0 GO:0040034 regulation of development, heterochronic(GO:0040034)
0.0 0.2 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.0 0.1 GO:0010446 response to alkaline pH(GO:0010446)
0.0 0.5 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.1 GO:0036292 DNA rewinding(GO:0036292)
0.0 0.3 GO:0006283 transcription-coupled nucleotide-excision repair(GO:0006283)
0.0 1.2 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.0 0.4 GO:0010088 phloem development(GO:0010088)
0.0 0.4 GO:0016926 protein desumoylation(GO:0016926)
0.0 0.1 GO:0048577 negative regulation of short-day photoperiodism, flowering(GO:0048577)
0.0 1.0 GO:0016109 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.0 1.3 GO:0010017 red or far-red light signaling pathway(GO:0010017) cellular response to red or far red light(GO:0071489)
0.0 0.3 GO:1900457 regulation of brassinosteroid mediated signaling pathway(GO:1900457)
0.0 0.9 GO:0043488 regulation of mRNA stability(GO:0043488)
0.0 2.4 GO:0010114 response to red light(GO:0010114)
0.0 0.3 GO:0048446 petal morphogenesis(GO:0048446)
0.0 0.7 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.4 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.4 GO:0010206 photosystem II repair(GO:0010206)
0.0 0.1 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.0 0.2 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 0.1 GO:0019695 choline metabolic process(GO:0019695)
0.0 0.4 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.5 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.1 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.0 1.4 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.0 0.2 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.0 0.1 GO:0019433 triglyceride catabolic process(GO:0019433)
0.0 0.2 GO:0000719 photoreactive repair(GO:0000719)
0.0 0.2 GO:0000012 single strand break repair(GO:0000012)
0.0 0.2 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.0 0.5 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.0 0.5 GO:0055071 manganese ion homeostasis(GO:0055071)
0.0 0.1 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.0 0.2 GO:0048629 trichome patterning(GO:0048629)
0.0 0.4 GO:2000067 regulation of root morphogenesis(GO:2000067)
0.0 0.2 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.0 0.8 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636) unsaturated fatty acid metabolic process(GO:0033559)
0.0 0.4 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 0.5 GO:0010039 response to iron ion(GO:0010039)
0.0 1.4 GO:0016128 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.0 1.2 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.2 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 1.7 GO:0006338 chromatin remodeling(GO:0006338)
0.0 0.2 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 0.2 GO:0009410 response to xenobiotic stimulus(GO:0009410)
0.0 0.8 GO:0034620 cellular response to unfolded protein(GO:0034620)
0.0 0.6 GO:0010109 regulation of photosynthesis(GO:0010109)
0.0 0.2 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 1.5 GO:0006749 glutathione metabolic process(GO:0006749)
0.0 0.3 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.0 0.1 GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.0 1.1 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.0 0.2 GO:0060866 leaf abscission(GO:0060866)
0.0 0.2 GO:0046621 negative regulation of organ growth(GO:0046621)
0.0 1.1 GO:0009625 response to insect(GO:0009625)
0.0 0.2 GO:0055070 copper ion homeostasis(GO:0055070)
0.0 0.5 GO:0030497 fatty acid elongation(GO:0030497)
0.0 0.3 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.0 0.3 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.1 GO:0010071 root meristem specification(GO:0010071)
0.0 0.3 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.0 0.9 GO:0016556 mRNA modification(GO:0016556)
0.0 0.2 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.0 0.1 GO:2001022 positive regulation of response to DNA damage stimulus(GO:2001022)
0.0 0.9 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.1 GO:0035970 peptidyl-threonine dephosphorylation(GO:0035970)
0.0 0.3 GO:0009880 embryonic pattern specification(GO:0009880)
0.0 0.5 GO:0031647 regulation of protein stability(GO:0031647)
0.0 0.1 GO:0015909 long-chain fatty acid transport(GO:0015909)
0.0 0.5 GO:0010229 inflorescence development(GO:0010229)
0.0 0.1 GO:0042770 signal transduction in response to DNA damage(GO:0042770) regulation of DNA damage checkpoint(GO:2000001)
0.0 0.8 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.9 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.5 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.0 0.6 GO:0071482 cellular response to light stimulus(GO:0071482)
0.0 0.1 GO:0034473 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.0 0.1 GO:1903530 regulation of exocytosis(GO:0017157) regulation of secretion(GO:0051046) regulation of secretion by cell(GO:1903530)
0.0 0.5 GO:0010167 response to nitrate(GO:0010167)
0.0 2.5 GO:0048511 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)
0.0 0.2 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.1 GO:0009557 antipodal cell differentiation(GO:0009557)
0.0 0.2 GO:0070828 heterochromatin organization(GO:0070828)
0.0 0.1 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.0 0.3 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.0 0.2 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.0 0.3 GO:0042147 retrograde transport, endosome to Golgi(GO:0042147)
0.0 0.2 GO:0051567 histone H3-K9 methylation(GO:0051567)
0.0 0.2 GO:0015804 neutral amino acid transport(GO:0015804)
0.0 0.1 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 1.0 GO:0010224 response to UV-B(GO:0010224)
0.0 0.2 GO:0019632 shikimate metabolic process(GO:0019632)
0.0 0.5 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.0 0.4 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.2 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.2 GO:0000913 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.0 0.6 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.0 0.3 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.0 0.3 GO:0006949 syncytium formation(GO:0006949)
0.0 0.1 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.5 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.2 GO:0006670 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.0 0.3 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 0.2 GO:0010375 stomatal complex patterning(GO:0010375)
0.0 0.1 GO:1990110 callus formation(GO:1990110)
0.0 0.0 GO:1990428 miRNA transport(GO:1990428)
0.0 0.2 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.1 GO:0010289 homogalacturonan biosynthetic process(GO:0010289) homogalacturonan metabolic process(GO:0010394)
0.0 0.4 GO:0010212 response to ionizing radiation(GO:0010212)
0.0 0.2 GO:0046352 disaccharide catabolic process(GO:0046352)
0.0 0.1 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.2 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.1 GO:0030030 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.0 1.1 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.3 GO:0046460 neutral lipid biosynthetic process(GO:0046460) acylglycerol biosynthetic process(GO:0046463)
0.0 0.3 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.6 GO:0009247 glycolipid biosynthetic process(GO:0009247)
0.0 2.2 GO:0009408 response to heat(GO:0009408)
0.0 0.4 GO:0090332 stomatal closure(GO:0090332)
0.0 0.1 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.5 GO:0001510 RNA methylation(GO:0001510)
0.0 0.1 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.2 GO:0015743 malate transport(GO:0015743)
0.0 0.1 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.0 0.4 GO:0032509 endosome transport via multivesicular body sorting pathway(GO:0032509)
0.0 0.3 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.1 GO:0080187 floral organ senescence(GO:0080187)
0.0 0.1 GO:0006285 base-excision repair, AP site formation(GO:0006285) DNA dealkylation involved in DNA repair(GO:0006307)
0.0 0.3 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.2 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.1 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.5 GO:0005985 sucrose metabolic process(GO:0005985)
0.0 0.9 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.1 GO:0006278 RNA-dependent DNA biosynthetic process(GO:0006278) telomere maintenance via telomerase(GO:0007004)
0.0 0.1 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.0 0.1 GO:0045116 protein neddylation(GO:0045116)
0.0 0.4 GO:0009853 photorespiration(GO:0009853)
0.0 0.2 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.1 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.0 0.1 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.0 GO:0009745 sucrose mediated signaling(GO:0009745)
0.0 0.1 GO:0051125 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0 0.1 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.0 0.1 GO:0000919 cell plate assembly(GO:0000919)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.6 GO:0010007 magnesium chelatase complex(GO:0010007)
0.2 0.6 GO:0005775 vacuolar lumen(GO:0005775)
0.2 2.1 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.2 0.8 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.6 GO:0009509 chromoplast(GO:0009509)
0.1 1.2 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.1 1.2 GO:0016272 prefoldin complex(GO:0016272)
0.1 1.0 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 2.6 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.1 1.4 GO:0009508 plastid chromosome(GO:0009508)
0.1 0.3 GO:0060293 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.1 0.5 GO:0000812 Swr1 complex(GO:0000812)
0.1 1.6 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.1 1.6 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.1 0.9 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.1 0.5 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.1 0.5 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 1.8 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.1 0.3 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.1 0.4 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 0.4 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1 0.5 GO:0031209 SCAR complex(GO:0031209)
0.1 0.6 GO:0031298 replication fork protection complex(GO:0031298)
0.1 4.8 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 1.9 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.1 1.8 GO:0000118 histone deacetylase complex(GO:0000118)
0.1 1.8 GO:0005871 kinesin complex(GO:0005871)
0.1 0.5 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.1 0.3 GO:0018444 translation release factor complex(GO:0018444)
0.1 0.4 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 0.1 GO:0034457 Mpp10 complex(GO:0034457)
0.1 0.4 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.1 0.3 GO:0010319 stromule(GO:0010319)
0.1 0.2 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.1 0.2 GO:0031353 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.1 0.4 GO:0009538 photosystem I reaction center(GO:0009538)
0.1 1.9 GO:0044439 microbody part(GO:0044438) peroxisomal part(GO:0044439)
0.1 0.4 GO:0016363 nuclear matrix(GO:0016363)
0.1 0.3 GO:0005663 DNA replication factor C complex(GO:0005663)
0.1 1.0 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 0.5 GO:0017119 Golgi transport complex(GO:0017119)
0.1 0.3 GO:0051233 spindle midzone(GO:0051233)
0.0 0.2 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.0 0.2 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.0 0.3 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.0 27.3 GO:0009532 plastid stroma(GO:0009532)
0.0 0.2 GO:0034515 proteasome storage granule(GO:0034515)
0.0 0.7 GO:0009531 secondary cell wall(GO:0009531)
0.0 0.2 GO:0005640 nuclear outer membrane(GO:0005640)
0.0 0.8 GO:0005762 organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.4 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.3 GO:0010168 ER body(GO:0010168)
0.0 0.2 GO:0000796 condensin complex(GO:0000796)
0.0 0.3 GO:0005771 multivesicular body(GO:0005771)
0.0 0.5 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.0 0.5 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 0.2 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.3 GO:0005844 polysome(GO:0005844)
0.0 0.2 GO:0000791 euchromatin(GO:0000791)
0.0 0.1 GO:0016328 lateral plasma membrane(GO:0016328)
0.0 0.1 GO:0097361 CIA complex(GO:0097361)
0.0 0.2 GO:0009346 citrate lyase complex(GO:0009346)
0.0 0.2 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.0 0.4 GO:0000786 nucleosome(GO:0000786) DNA packaging complex(GO:0044815)
0.0 0.3 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.2 GO:0089701 U2AF(GO:0089701)
0.0 0.2 GO:0031965 nuclear membrane(GO:0031965)
0.0 1.1 GO:0009504 cell plate(GO:0009504)
0.0 0.4 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.0 0.1 GO:0033263 CORVET complex(GO:0033263)
0.0 0.3 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.0 0.8 GO:0005643 nuclear pore(GO:0005643)
0.0 0.8 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 2.7 GO:0018995 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 0.2 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.1 GO:0000792 heterochromatin(GO:0000792)
0.0 0.2 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 2.8 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.6 GO:0005875 microtubule associated complex(GO:0005875)
0.0 5.5 GO:0005777 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.6 GO:0005635 nuclear envelope(GO:0005635)
0.0 0.8 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 0.1 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.0 0.2 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 0.2 GO:0042170 plastid membrane(GO:0042170)
0.0 3.4 GO:0031976 chloroplast thylakoid(GO:0009534) plastid thylakoid(GO:0031976)
0.0 0.4 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.7 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.0 0.2 GO:0048500 signal recognition particle, endoplasmic reticulum targeting(GO:0005786) signal recognition particle(GO:0048500)
0.0 0.6 GO:0000123 histone acetyltransferase complex(GO:0000123)
0.0 0.6 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.9 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.0 0.1 GO:0030137 COPI-coated vesicle(GO:0030137)
0.0 0.5 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 0.2 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.2 GO:0000776 kinetochore(GO:0000776)
0.0 0.1 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.6 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.5 GO:0016592 mediator complex(GO:0016592)
0.0 0.1 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.0 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.6 3.3 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.4 1.3 GO:0046422 violaxanthin de-epoxidase activity(GO:0046422)
0.4 1.3 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.4 1.2 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.4 3.2 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.4 1.2 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.4 1.5 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.3 1.6 GO:0051003 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.3 0.9 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.3 1.2 GO:0052595 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.3 1.2 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.3 1.2 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.3 1.2 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.2 1.0 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.2 1.2 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.2 0.9 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.2 2.0 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.2 0.9 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
0.2 0.6 GO:0010242 oxygen evolving activity(GO:0010242)
0.2 1.0 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.2 1.4 GO:0004567 beta-mannosidase activity(GO:0004567)
0.2 0.6 GO:0070678 preprotein binding(GO:0070678)
0.2 1.1 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.2 2.2 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.2 0.9 GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity(GO:0003857)
0.2 6.8 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.2 0.5 GO:0004528 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.2 0.5 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.2 0.7 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.2 0.5 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.2 0.5 GO:0019904 protein domain specific binding(GO:0019904)
0.2 0.7 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.2 0.6 GO:0050162 oxalate oxidase activity(GO:0050162)
0.2 0.9 GO:0030544 Hsp70 protein binding(GO:0030544)
0.1 0.4 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 0.7 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.7 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.1 1.8 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.1 0.8 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.1 0.7 GO:0035197 siRNA binding(GO:0035197)
0.1 0.4 GO:0016728 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.1 0.4 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 1.2 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 0.9 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.1 0.4 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.1 0.5 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.1 0.8 GO:0030332 cyclin binding(GO:0030332)
0.1 5.8 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 0.4 GO:0019156 isoamylase activity(GO:0019156)
0.1 1.0 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 0.9 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 1.3 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.1 0.3 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 1.1 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 0.7 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.1 0.4 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.1 0.7 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.1 0.3 GO:0050302 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.1 0.4 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.1 0.8 GO:0004096 catalase activity(GO:0004096)
0.1 0.4 GO:0070140 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.1 0.4 GO:0070401 NADP+ binding(GO:0070401)
0.1 0.4 GO:0050486 intramolecular transferase activity, transferring hydroxy groups(GO:0050486)
0.1 0.3 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.1 0.7 GO:0001653 peptide receptor activity(GO:0001653)
0.1 0.3 GO:0080104 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.1 0.3 GO:0035671 enone reductase activity(GO:0035671)
0.1 0.3 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.1 1.2 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 0.8 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.1 1.3 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.6 GO:0004623 phospholipase A2 activity(GO:0004623)
0.1 0.2 GO:0019003 GDP binding(GO:0019003)
0.1 0.4 GO:0016463 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.1 1.1 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.1 1.4 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 0.5 GO:0052852 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.1 1.6 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 0.5 GO:0046592 polyamine oxidase activity(GO:0046592)
0.1 0.5 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.1 0.3 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.1 1.5 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 0.6 GO:0016849 phosphorus-oxygen lyase activity(GO:0016849)
0.1 0.5 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.1 0.3 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.1 0.8 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.9 GO:0046556 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 0.7 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.1 0.7 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.1 2.9 GO:0003713 transcription coactivator activity(GO:0003713)
0.1 0.4 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.4 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.2 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 1.4 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.1 0.4 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.1 0.6 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.1 0.3 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 0.1 GO:0048256 flap endonuclease activity(GO:0048256)
0.1 0.8 GO:0030674 protein binding, bridging(GO:0030674)
0.1 0.5 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 9.2 GO:0043531 ADP binding(GO:0043531)
0.1 0.2 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
0.1 0.2 GO:0047493 sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.1 0.3 GO:0032452 histone demethylase activity(GO:0032452) histone demethylase activity (H3-K9 specific)(GO:0032454)
0.1 0.2 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.1 0.2 GO:0008187 poly-pyrimidine tract binding(GO:0008187)
0.1 0.2 GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity(GO:0004571)
0.1 0.2 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 0.4 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 0.7 GO:0008097 5S rRNA binding(GO:0008097)
0.1 1.7 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.1 0.7 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.1 0.2 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 0.2 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.1 0.7 GO:0016308 phosphatidylinositol phosphate kinase activity(GO:0016307) 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.2 GO:0015929 hexosaminidase activity(GO:0015929)
0.0 0.2 GO:0009883 red or far-red light photoreceptor activity(GO:0009883)
0.0 0.5 GO:0070568 guanylyltransferase activity(GO:0070568)
0.0 0.1 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.0 0.2 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.0 0.1 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.0 0.4 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.0 0.9 GO:0030276 clathrin binding(GO:0030276)
0.0 0.4 GO:0060090 binding, bridging(GO:0060090)
0.0 0.1 GO:0036310 annealing helicase activity(GO:0036310)
0.0 0.5 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.2 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0 0.2 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.0 1.0 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.5 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.0 0.7 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 0.6 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.6 GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor(GO:0016634)
0.0 0.2 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.1 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.0 5.2 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.8 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.4 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.2 GO:0015563 allantoin uptake transmembrane transporter activity(GO:0005274) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.0 1.5 GO:0004407 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.0 0.2 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 0.7 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.2 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 3.1 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.4 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.3 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.2 GO:0000155 phosphorelay sensor kinase activity(GO:0000155)
0.0 0.2 GO:0070034 telomerase RNA binding(GO:0070034)
0.0 0.7 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.3 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 3.0 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.3 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 1.4 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.2 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.2 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.0 0.3 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.2 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.0 0.6 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.0 0.2 GO:0051723 protein methylesterase activity(GO:0051723)
0.0 0.2 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.0 0.1 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.0 0.4 GO:2001070 starch binding(GO:2001070)
0.0 0.5 GO:0001099 basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099)
0.0 0.6 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.1 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.1 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.0 0.2 GO:0004629 phospholipase C activity(GO:0004629)
0.0 0.6 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.1 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.0 2.0 GO:0016859 cis-trans isomerase activity(GO:0016859)
0.0 0.9 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.2 GO:0004765 shikimate kinase activity(GO:0004765)
0.0 0.1 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.2 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.0 0.7 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.1 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.0 0.4 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.0 0.1 GO:0008649 rRNA methyltransferase activity(GO:0008649)
0.0 1.0 GO:0003727 single-stranded RNA binding(GO:0003727)
0.0 0.5 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.4 GO:0008417 fucosyltransferase activity(GO:0008417)
0.0 0.2 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.0 0.1 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.0 0.1 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.0 0.6 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.1 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.0 0.1 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.1 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.0 0.1 GO:0004385 guanylate kinase activity(GO:0004385)
0.0 0.2 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 0.1 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.0 0.3 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.5 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 0.6 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.0 0.0 GO:0048365 Rac GTPase binding(GO:0048365)
0.0 2.0 GO:0051015 actin filament binding(GO:0051015)
0.0 0.1 GO:0019788 NEDD8 transferase activity(GO:0019788)
0.0 1.4 GO:0004843 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.0 0.1 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.0 1.2 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.2 GO:0019210 kinase inhibitor activity(GO:0019210)
0.0 0.1 GO:0017091 AU-rich element binding(GO:0017091)
0.0 0.1 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 0.2 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.3 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.2 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.6 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.2 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 0.2 GO:0008312 7S RNA binding(GO:0008312)
0.0 0.2 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.0 0.9 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.0 GO:0008144 drug binding(GO:0008144)
0.0 0.3 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.3 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.4 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.0 0.3 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.2 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.3 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.8 GO:0010857 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.7 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.6 GO:0016278 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.0 0.1 GO:0015245 fatty acid transporter activity(GO:0015245)
0.0 0.3 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.9 GO:0000989 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 0.0 GO:0036361 racemase and epimerase activity, acting on amino acids and derivatives(GO:0016855) racemase activity, acting on amino acids and derivatives(GO:0036361) amino-acid racemase activity(GO:0047661)
0.0 0.2 GO:0090599 alpha-glucosidase activity(GO:0090599)
0.0 0.2 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.5 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.0 0.1 GO:0017022 myosin binding(GO:0017022)
0.0 0.3 GO:0008170 N-methyltransferase activity(GO:0008170)
0.0 0.4 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.6 GO:0000987 core promoter proximal region sequence-specific DNA binding(GO:0000987) core promoter proximal region DNA binding(GO:0001159)
0.0 0.1 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.0 0.0 GO:0000035 acyl binding(GO:0000035)
0.0 0.0 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.0 0.2 GO:0019200 carbohydrate kinase activity(GO:0019200)
0.0 0.1 GO:0071933 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.0 0.1 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.9 PID AP1 PATHWAY AP-1 transcription factor network
0.0 0.2 PID DELTA NP63 PATHWAY Validated transcriptional targets of deltaNp63 isoforms
0.0 0.1 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.0 0.1 PID ATM PATHWAY ATM pathway
0.0 0.1 PID RAS PATHWAY Regulation of Ras family activation
0.0 0.1 PID TELOMERASE PATHWAY Regulation of Telomerase
0.0 0.2 PID CDC42 PATHWAY CDC42 signaling events
0.0 0.3 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 0.1 PID E2F PATHWAY E2F transcription factor network
0.0 0.1 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.0 0.1 PID HIF2PATHWAY HIF-2-alpha transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.1 0.9 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.1 0.6 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 7ALPHA HYDROXYCHOLESTEROL Genes involved in Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
0.1 0.4 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 0.2 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.1 0.1 REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION Genes involved in Cyclin E associated events during G1/S transition
0.0 0.1 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.0 0.3 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.0 0.1 REACTOME MEIOTIC SYNAPSIS Genes involved in Meiotic Synapsis
0.0 0.3 REACTOME REPAIR SYNTHESIS FOR GAP FILLING BY DNA POL IN TC NER Genes involved in Repair synthesis for gap-filling by DNA polymerase in TC-NER
0.0 0.8 REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex
0.0 0.1 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.1 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.0 0.1 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.0 0.1 REACTOME DNA REPAIR Genes involved in DNA Repair