GSE130291:vernalization in Arabidopsis thaliana
Gene Symbol | Gene ID | Gene Info |
---|---|---|
AT1G01250
|
AT1G01250 | Integrase-type DNA-binding superfamily protein |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
AT1G01250 | arTal_v1_Chr1_-_105330_105330 | -0.52 | 5.6e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
arTal_v1_Chr4_+_14304921_14304921 Show fit | 0.54 |
AT4G29020.2
AT4G29020.1 |
glycine-rich protein |
|
arTal_v1_Chr3_-_6258426_6258426 Show fit | 0.53 |
AT3G18250.1
|
Putative membrane lipoprotein |
|
arTal_v1_Chr3_-_8064649_8064649 Show fit | 0.51 |
AT3G22800.1
|
Leucine-rich repeat (LRR) family protein |
|
arTal_v1_Chr2_-_16237280_16237280 Show fit | 0.47 |
AT2G38870.1
|
Serine protease inhibitor, potato inhibitor I-type family protein |
|
arTal_v1_Chr1_+_10897925_10897925 Show fit | 0.46 |
AT1G30720.1
|
FAD-binding Berberine family protein |
|
arTal_v1_Chr4_+_7304323_7304323 Show fit | 0.46 |
AT4G12290.2
|
Copper amine oxidase family protein |
|
arTal_v1_Chr4_-_16168711_16168711 Show fit | 0.45 |
AT4G33660.1
|
cysteine-rich TM module stress tolerance protein |
|
arTal_v1_Chr3_+_11252807_11252807 Show fit | 0.45 |
AT3G29320.1
|
Glycosyl transferase, family 35 |
|
arTal_v1_Chr4_+_7303985_7303985 Show fit | 0.44 |
AT4G12290.1
|
Copper amine oxidase family protein |
|
arTal_v1_Chr1_+_3999157_3999202 Show fit | 0.44 |
AT1G11850.2
AT1G11850.4 AT1G11850.3 AT1G11850.1 |
transmembrane protein |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.0 | GO:0010244 | response to low fluence blue light stimulus by blue low-fluence system(GO:0010244) |
0.0 | 0.5 | GO:1900057 | positive regulation of leaf senescence(GO:1900057) |
0.1 | 0.4 | GO:0097438 | release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438) |
0.1 | 0.4 | GO:0005980 | glycogen catabolic process(GO:0005980) |
0.0 | 0.4 | GO:0080086 | stamen filament development(GO:0080086) |
0.0 | 0.4 | GO:0046348 | aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072) |
0.0 | 0.3 | GO:0008285 | negative regulation of cell proliferation(GO:0008285) |
0.1 | 0.2 | GO:0006571 | tyrosine biosynthetic process(GO:0006571) |
0.1 | 0.2 | GO:0051973 | positive regulation of telomerase activity(GO:0051973) |
0.0 | 0.2 | GO:0002679 | respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | GO:0000322 | storage vacuole(GO:0000322) protein storage vacuole(GO:0000326) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.0 | 0.5 | GO:0005199 | structural constituent of cell wall(GO:0005199) |
0.1 | 0.4 | GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703) |
0.1 | 0.4 | GO:0016165 | linoleate 13S-lipoxygenase activity(GO:0016165) |
0.0 | 0.2 | GO:0016812 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812) |
0.0 | 0.2 | GO:0004575 | sucrose alpha-glucosidase activity(GO:0004575) |
0.0 | 0.2 | GO:0008061 | chitin binding(GO:0008061) |
0.0 | 0.2 | GO:0008574 | ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574) |
0.0 | 0.2 | GO:0004568 | chitinase activity(GO:0004568) |
0.0 | 0.2 | GO:0016308 | 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION | Genes involved in E2F-enabled inhibition of pre-replication complex formation |