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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G01060

Z-value: 1.19

Transcription factors associated with AT1G01060

Gene Symbol Gene ID Gene Info
AT1G01060 Homeodomain-like superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
LHYarTal_v1_Chr1_-_37757_37871-0.352.2e-01Click!

Activity profile of AT1G01060 motif

Sorted Z-values of AT1G01060 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_6826587 1.69 AT4G11190.1
Disease resistance-responsive (dirigent-like protein) family protein
Chr5_-_19036938 1.35 AT5G46890.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_6130025 1.34 AT1G17810.1
beta-tonoplast intrinsic protein
Chr5_+_1119937 1.31 AT5G04120.1
Phosphoglycerate mutase family protein
Chr5_+_19434758 1.30 AT5G47990.1
cytochrome P450, family 705, subfamily A, polypeptide 5
Chr5_-_19040456 1.26 AT5G46900.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_1758807 1.25 AT3G05890.1
Low temperature and salt responsive protein family
Chr5_-_16998925 1.22 AT5G42510.1
Disease resistance-responsive (dirigent-like protein) family protein
Chr2_+_19151481 1.17 AT2G46650.1
cytochrome B5 isoform C
Chr4_-_13016235 1.16 AT4G25470.1
C-repeat/DRE binding factor 2
Chr4_-_13022996 1.14 AT4G25490.1
C-repeat/DRE binding factor 1
Chr1_+_8195776 1.11 AT1G23100.1
GroES-like family protein
Chr4_-_12886695 1.11 AT4G25100.1
AT4G25100.3
AT4G25100.4
Fe superoxide dismutase 1
Chr5_+_26772644 1.08 AT5G67080.1
mitogen-activated protein kinase kinase kinase 19
Chr3_+_20354351 1.08 AT3G54940.3
AT3G54940.2
Papain family cysteine protease
Chr2_-_9538963 1.08 AT2G22470.1
arabinogalactan protein 2
Chr5_+_8033665 1.06 AT5G23830.1
AT5G23830.2
MD-2-related lipid recognition domain-containing protein
Chr4_+_2449434 1.06 AT4G04840.1
methionine sulfoxide reductase B6
Chr1_+_920950 1.05 AT1G03700.1
Uncharacterized protein family (UPF0497)
Chr2_-_151971 1.05 AT2G01300.1
mediator of RNA polymerase II transcription subunit
Chr5_+_21603569 1.03 AT5G53250.1
arabinogalactan protein 22
Chr5_-_15378416 1.02 AT5G38410.3
AT5G38410.2
Ribulose bisphosphate carboxylase (small chain) family protein
Chr5_-_15378642 1.02 AT5G38410.1
Ribulose bisphosphate carboxylase (small chain) family protein
Chr3_-_11194897 1.00 AT3G29250.2
AT3G29250.1
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_16441808 1.00 AT5G41080.2
PLC-like phosphodiesterases superfamily protein
Chr5_-_16995062 1.00 AT5G42500.1
Disease resistance-responsive (dirigent-like protein) family protein
Chr5_+_16441655 0.99 AT5G41080.1
PLC-like phosphodiesterases superfamily protein
Chr3_-_7864895 0.98 AT3G22240.1
cysteine-rich/transmembrane domain PCC1-like protein
Chr2_-_14863412 0.97 AT2G35300.1
Late embryogenesis abundant protein, group 1 protein
Chr5_+_22893151 0.96 AT5G56540.1
arabinogalactan protein 14
Chr3_-_21097481 0.95 AT3G57010.1
Calcium-dependent phosphotriesterase superfamily protein
Chr1_-_3241863 0.95 AT1G09950.1
RESPONSE TO ABA AND SALT 1
Chr1_-_12617032 0.95 AT1G34510.1
Peroxidase superfamily protein
Chr1_-_18390496 0.95 AT1G49700.2
AT1G49700.1
AT1G49700.3
AT1G49700.4
Plant protein 1589 of unknown function
Chr1_-_6579314 0.94 AT1G19050.1
response regulator 7
Chr1_-_1527360 0.94 AT1G05250.1
Peroxidase superfamily protein
Chr1_-_27998821 0.94 AT1G74500.1
activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1
Chr4_+_16185044 0.92 AT4G33730.1
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr4_+_7434199 0.91 AT4G12545.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_9208861 0.91 AT3G25290.1
AT3G25290.2
Auxin-responsive family protein
Chr2_-_15036556 0.90 AT2G35770.1
serine carboxypeptidase-like 28
Chr2_-_17438168 0.90 AT2G41800.1
imidazolonepropionase (Protein of unknown function, DUF642)
Chr5_+_16301072 0.90 AT5G40730.1
arabinogalactan protein 24
Chr1_-_25580194 0.90 AT1G68250.2
AT1G68250.1
hypothetical protein
Chr4_-_12886902 0.89 AT4G25100.2
AT4G25100.5
Fe superoxide dismutase 1
Chr3_-_2130451 0.88 AT3G06750.1
hydroxyproline-rich glycoprotein family protein
Chr5_+_4087689 0.88 AT5G12940.1
Leucine-rich repeat (LRR) family protein
Chr4_-_14958080 0.88 AT4G30670.1
Putative membrane lipoprotein
Chr5_+_23337832 0.87 AT5G57625.1
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr2_+_19605030 0.87 AT2G47880.1
Glutaredoxin family protein
Chr4_-_14830224 0.86 AT4G30290.1
xyloglucan endotransglucosylase/hydrolase 19
Chr1_+_19619724 0.86 AT1G52690.2
AT1G52690.1
Late embryogenesis abundant protein (LEA) family protein
Chr5_+_9200271 0.85 AT5G26260.1
TRAF-like family protein
Chr5_-_3517035 0.85 AT5G11070.1
hypothetical protein
Chr4_-_18206684 0.84 AT4G39070.1
B-box zinc finger family protein
Chr2_+_11773187 0.84 AT2G27550.1
centroradiali
Chr2_-_9896325 0.84 AT2G23240.2
AT2G23240.1
Plant EC metallothionein-like protein, family 15
Chr1_-_4975705 0.83 AT1G14540.1
Peroxidase superfamily protein
Chr4_-_9680389 0.82 AT4G17280.1
Auxin-responsive family protein
Chr5_+_2803833 0.82 AT5G08640.1
AT5G08640.2
flavonol synthase 1
Chr3_-_8589754 0.82 AT3G23810.1
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr4_-_9754161 0.81 AT4G17490.1
ethylene responsive element binding factor 6
Chr4_-_13019400 0.81 AT4G25480.1
dehydration response element B1A
Chr4_+_7439115 0.81 AT4G12550.1
Auxin-Induced in Root cultures 1
Chr5_-_3172701 0.81 AT5G10130.1
Pollen Ole e 1 allergen and extensin family protein
Chr4_+_11754912 0.81 AT4G22214.1
Defensin-like (DEFL) family protein
Chr5_-_3728726 0.80 AT5G11590.1
Integrase-type DNA-binding superfamily protein
Chr1_-_28581315 0.80 AT1G76160.1
SKU5 similar 5
Chr1_+_29130375 0.79 AT1G77520.1
O-methyltransferase family protein
Chr4_-_993039 0.79 AT4G02270.1
root hair specific 13
Chr5_+_1568694 0.78 AT5G05290.1
expansin A2
Chr2_-_8235440 0.78 AT2G18980.1
Peroxidase superfamily protein
Chr4_+_10372658 0.78 AT4G18940.1
RNA ligase/cyclic nucleotide phosphodiesterase family protein
Chr2_+_19505827 0.77 AT2G47540.1
Pollen Ole e 1 allergen and extensin family protein
Chr1_-_8559066 0.77 AT1G24170.1
Nucleotide-diphospho-sugar transferases superfamily protein
Chr2_+_15445294 0.77 AT2G36830.1
gamma tonoplast intrinsic protein
Chr5_+_4488476 0.77 AT5G13930.1
Chalcone and stilbene synthase family protein
Chr3_+_16770888 0.77 AT3G45680.1
Major facilitator superfamily protein
Chr5_-_24377206 0.76 AT5G60660.1
plasma membrane intrinsic protein 2;4
Chr2_-_12889931 0.76 AT2G30210.1
laccase 3
Chr3_+_9480746 0.75 AT3G25900.1
AT3G25900.3
AT3G25900.2
Homocysteine S-methyltransferase family protein
Chr3_-_18525792 0.74 AT3G49960.1
Peroxidase superfamily protein
Chr1_+_26860110 0.74 AT1G71250.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_+_13275200 0.74 AT4G26200.1
1-amino-cyclopropane-1-carboxylate synthase 7
Chr5_+_26818949 0.74 AT5G67210.1
IRREGULAR XYLEM protein (DUF579)
Chr3_-_17008528 0.74 AT3G46280.1
kinase-like protein
Chr4_-_10176638 0.74 AT4G18422.1
transmembrane protein
Chr5_-_17831336 0.73 AT5G44260.1
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr4_+_13811612 0.73 AT4G27654.1
transmembrane protein
Chr1_-_3029549 0.73 AT1G09380.1
nodulin MtN21 /EamA-like transporter family protein
Chr3_-_20203919 0.72 AT3G54580.1
Proline-rich extensin-like family protein
Chr3_-_11195171 0.72 AT3G29250.3
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_-_14399170 0.72 AT2G34090.5
AT2G34090.1
AT2G34090.2
AT2G34090.3
AT2G34090.4
maternal effect embryo arrest 18
Chr3_-_4834015 0.72 AT3G14440.1
nine-cis-epoxycarotenoid dioxygenase 3
Chr3_-_20418910 0.72 AT3G55090.1
ABC-2 type transporter family protein
Chr2_-_7182287 0.72 AT2G16570.1
GLN phosphoribosyl pyrophosphate amidotransferase 1
Chr5_+_1672070 0.71 AT5G05600.1
AT5G05600.2
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_-_20648891 0.71 AT1G55330.1
arabinogalactan protein 21
Chr3_+_4408925 0.71 AT3G13520.1
arabinogalactan protein 12
Chr4_+_14368877 0.71 AT4G29140.1
MATE efflux family protein
Chr3_+_21932627 0.70 AT3G59350.4
AT3G59350.5
AT3G59350.3
Protein kinase superfamily protein
Chr3_+_21932337 0.70 AT3G59350.2
AT3G59350.1
Protein kinase superfamily protein
Chr4_-_12551331 0.70 AT4G24180.4
AT4G24180.5
AT4G24180.2
AT4G24180.3
AT4G24180.1
AT4G24180.6
THAUMATIN-LIKE PROTEIN 1
Chr2_-_16244531 0.69 AT2G38905.1
Low temperature and salt responsive protein family
Chr4_+_16598958 0.69 AT4G34810.1
SAUR-like auxin-responsive protein family
Chr3_-_18804731 0.69 AT3G50640.1
hypothetical protein
Chr5_+_26894778 0.69 AT5G67400.1
root hair specific 19
Chr2_-_12932828 0.69 AT2G30340.2
AT2G30340.1
LOB domain-containing protein 13
Chr5_-_23984656 0.69 AT5G59490.1
AT5G59490.2
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr1_-_21057577 0.68 AT1G56240.1
phloem protein 2-B13
Chr1_+_8709941 0.68 AT1G24580.1
RING/U-box superfamily protein
Chr5_+_15256243 0.67 AT5G38200.2
AT5G38200.3
AT5G38200.1
Class I glutamine amidotransferase-like superfamily protein
Chr4_-_16285229 0.67 AT4G33980.1
hypothetical protein
Chr1_-_11222789 0.67 AT1G31350.1
AT1G31350.2
KAR-UP F-box 1
Chr2_+_8097420 0.67 AT2G18690.2
AT2G18690.1
transmembrane protein
Chr4_-_16285059 0.67 AT4G33980.2
hypothetical protein
Chr3_+_5692607 0.67 AT3G16720.1
TOXICOS EN LEVADURA 2
Chr3_-_19566492 0.66 AT3G52790.1
peptidoglycan-binding LysM domain-containing protein
Chr1_+_4433605 0.66 AT1G12990.1
beta-1,4-N-acetylglucosaminyltransferase family protein
Chr2_+_19508929 0.66 AT2G47550.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_+_5187082 0.66 AT3G15357.1
phosphopantothenoylcysteine decarboxylase subunit
Chr5_+_16202142 0.66 AT5G40460.1
cyclin-dependent kinase inhibitor SMR3-like protein
Chr4_-_11592425 0.66 AT4G21850.1
methionine sulfoxide reductase B9
Chr4_-_11592238 0.65 AT4G21850.2
methionine sulfoxide reductase B9
Chr4_-_7493080 0.65 AT4G12730.1
FASCICLIN-like arabinogalactan 2
Chr5_+_25064793 0.65 AT5G62420.1
NAD(P)-linked oxidoreductase superfamily protein
Chr2_+_1676999 0.65 AT2G04780.2
FASCICLIN-like arabinoogalactan 7
Chr4_-_10934225 0.65 AT4G20240.1
AT4G20240.2
cytochrome P450, family 71, subfamily A, polypeptide 27
Chr5_-_1078304 0.65 AT5G03995.1
hypothetical protein
Chr3_-_6980523 0.64 AT3G20015.1
Eukaryotic aspartyl protease family protein
Chr3_+_21932971 0.64 AT3G59350.6
Protein kinase superfamily protein
Chr4_-_10423487 0.64 AT4G19030.3
AT4G19030.1
AT4G19030.2
NOD26-like major intrinsic protein 1
Chr2_+_1676717 0.64 AT2G04780.1
FASCICLIN-like arabinoogalactan 7
Chr5_-_7805968 0.64 AT5G23190.1
cytochrome P450, family 86, subfamily B, polypeptide 1
Chr3_-_19633283 0.64 AT3G52940.2
AT3G52940.1
AT3G52941.1
Ergosterol biosynthesis ERG4/ERG24 family
Putative membrane lipoprotein
Chr2_+_6313883 0.64 AT2G14750.1
APS kinase
Chr1_+_28291698 0.63 AT1G75390.1
AT1G75390.2
basic leucine-zipper 44
Chr2_-_14862178 0.63 AT2G35290.1
hypothetical protein
Chr4_+_13812989 0.63 AT4G27657.1
hypothetical protein
Chr1_-_28233134 0.63 AT1G75220.1
Major facilitator superfamily protein
Chr2_+_11809279 0.63 AT2G27690.1
cytochrome P450, family 94, subfamily C, polypeptide 1
Chr1_-_6241510 0.63 AT1G18140.1
laccase 1
Chr2_+_6404131 0.62 AT2G14900.1
Gibberellin-regulated family protein
Chr5_+_9295341 0.62 AT5G26731.1
hypothetical protein
Chr5_-_18371021 0.62 AT5G45340.2
AT5G45340.1
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr4_+_7900374 0.62 AT4G13580.1
Disease resistance-responsive (dirigent-like protein) family protein
Chr1_+_24442388 0.62 AT1G65730.1
YELLOW STRIPE like 7
Chr5_-_6413259 0.62 AT5G19110.1
AT5G19110.2
Eukaryotic aspartyl protease family protein
Chr2_-_9564850 0.62 AT2G22500.1
uncoupling protein 5
Chr5_-_4566988 0.62 AT5G14150.1
AT5G14150.2
Emb:.1 protein, putative (Protein of unknown function, DUF642)
Chr3_+_5121303 0.62 AT3G15210.1
ethylene responsive element binding factor 4
Chr5_-_25843555 0.62 AT5G64660.1
CYS, MET, PRO, and GLY protein 2
Chr4_+_14762819 0.62 AT4G30170.1
Peroxidase family protein
Chr1_+_1529767 0.62 AT1G05260.1
Peroxidase superfamily protein
Chr3_-_12451556 0.62 AT3G30775.2
AT3G30775.1
Methylenetetrahydrofolate reductase family protein
Chr5_+_18875382 0.61 AT5G46530.1
AWPM-19-like family protein
Chr5_-_17962276 0.61 AT5G44568.1
transmembrane protein
Chr2_+_8144881 0.61 AT2G18800.1
xyloglucan endotransglucosylase/hydrolase 21
Chr2_-_6960216 0.61 AT2G16005.1
MD-2-related lipid recognition domain-containing protein
Chr1_-_7396773 0.61 AT1G21120.1
AT1G21120.2
O-methyltransferase family protein
Chr3_-_9723904 0.61 AT3G26520.1
tonoplast intrinsic protein 2
Chr4_+_17524461 0.60 AT4G37240.1
HTH-type transcriptional regulator
Chr5_+_25033471 0.60 AT5G62340.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_22628264 0.60 AT1G61340.1
AT1G61340.2
F-box family protein
Chr1_+_23168767 0.60 AT1G62570.1
flavin-monooxygenase glucosinolate S-oxygenase 4
Chr2_+_11037303 0.60 AT2G25890.2
AT2G25890.1
Oleosin family protein
Chr1_+_29373803 0.60 AT1G78090.1
AT1G78090.2
trehalose-6-phosphate phosphatase
Chr5_-_20191604 0.59 AT5G49690.1
UDP-Glycosyltransferase superfamily protein
Chr1_-_10164452 0.59 AT1G29090.1
Cysteine proteinases superfamily protein
Chr1_-_23013477 0.59 AT1G62290.5
AT1G62290.6
AT1G62290.1
AT1G62290.3
AT1G62290.4
AT1G62290.2
Saposin-like aspartyl protease family protein
Chr5_-_23700226 0.59 AT5G58650.1
plant peptide containing sulfated tyrosine 1
Chr2_-_5776289 0.59 AT2G13820.2
AT2G13820.1
AT2G13820.3
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_3777236 0.58 AT1G11260.1
sugar transporter 1
Chr5_-_15175566 0.58 AT5G38030.1
MATE efflux family protein
Chr1_-_2747936 0.58 AT1G08630.6
AT1G08630.7
AT1G08630.5
AT1G08630.2
threonine aldolase 1
Chr2_-_13609955 0.58 AT2G31980.1
PHYTOCYSTATIN 2
Chr5_+_5038563 0.58 AT5G15530.1
biotin carboxyl carrier protein 2
Chr1_+_28472357 0.58 AT1G75830.1
low-molecular-weight cysteine-rich 67
Chr5_+_8148544 0.58 AT5G24100.1
Leucine-rich repeat protein kinase family protein
Chr5_+_25097944 0.58 AT5G62520.1
AT5G62520.2
similar to RCD one 5
Chr5_+_6833564 0.58 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
Raffinose synthase family protein
Chr2_+_4005579 0.58 AT2G10405.1

Chr1_-_13456336 0.58 AT1G36060.1
Integrase-type DNA-binding superfamily protein
Chr5_+_24248920 0.57 AT5G60220.1
tetraspanin4
Chr4_+_16921800 0.57 AT4G35690.1
hypothetical protein (DUF241)
Chr4_-_11896480 0.57 AT4G22590.1
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_+_8035690 0.57 AT5G23840.1
AT5G23840.2
MD-2-related lipid recognition domain-containing protein
Chr3_+_7940914 0.57 AT3G22415.1
hypothetical protein
Chr5_-_14562863 0.57 AT5G36910.1
thionin 2.2
Chr2_+_9592956 0.56 AT2G22590.1
UDP-Glycosyltransferase superfamily protein
Chr3_+_3595694 0.56 AT3G11430.1
glycerol-3-phosphate acyltransferase 5
Chr4_+_9157471 0.56 AT4G16160.2
AT4G16160.1
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Chr3_-_22375822 0.56 AT3G60540.3
AT3G60540.1
AT3G60540.2
Preprotein translocase Sec, Sec61-beta subunit protein
Chr4_+_1158783 0.56 AT4G02655.2
AT4G02655.1
transmembrane protein
Chr4_-_6425678 0.56 AT4G10370.1
Cysteine/Histidine-rich C1 domain family protein
Chr5_-_2359311 0.56 AT5G07450.1
cyclin p4;3
Chr4_+_11155453 0.56 AT4G20830.1
AT4G20830.2
FAD-binding Berberine family protein
Chr3_-_3059148 0.56 AT3G09940.2
AT3G09940.1
monodehydroascorbate reductase
Chr5_-_4423095 0.56 AT5G13700.1
polyamine oxidase 1
Chr3_+_6826664 0.55 AT3G19663.1
hypothetical protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G01060

PNG image of the network

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