A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ZNF384 | hg19_v2_chr12_-_6798616_6798684 | -0.98 | 4.3e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_+_91152303 Show fit | 3.52 |
ENST00000371804.3
|
interferon-induced protein with tetratricopeptide repeats 1 |
|
chr10_+_91087651 Show fit | 1.13 |
ENST00000371818.4
|
interferon-induced protein with tetratricopeptide repeats 3 |
|
chr1_-_63988846 Show fit | 1.11 |
ENST00000283568.8
ENST00000371092.3 ENST00000271002.10 |
integrin beta 3 binding protein (beta3-endonexin) |
|
chr12_+_113344755 Show fit | 1.07 |
ENST00000550883.1
|
2'-5'-oligoadenylate synthetase 1, 40/46kDa |
|
chr12_+_113344582 Show fit | 0.98 |
ENST00000202917.5
ENST00000445409.2 ENST00000452357.2 |
2'-5'-oligoadenylate synthetase 1, 40/46kDa |
|
chrX_+_122993544 Show fit | 0.96 |
ENST00000422098.1
|
X-linked inhibitor of apoptosis |
|
chr12_+_100594557 Show fit | 0.94 |
ENST00000546902.1
ENST00000552376.1 ENST00000551617.1 |
ARP6 actin-related protein 6 homolog (yeast) |
|
chr2_+_187371440 Show fit | 0.90 |
ENST00000445547.1
|
zinc finger CCCH-type containing 15 |
|
chr12_-_76742183 Show fit | 0.87 |
ENST00000393262.3
|
Bardet-Biedl syndrome 10 |
|
chr4_+_78804393 Show fit | 0.83 |
ENST00000502384.1
|
mitochondrial ribosomal protein L1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.2 | GO:0045071 | negative regulation of viral genome replication(GO:0045071) |
0.9 | 3.5 | GO:0051097 | negative regulation of helicase activity(GO:0051097) |
0.0 | 1.7 | GO:0045494 | photoreceptor cell maintenance(GO:0045494) |
0.0 | 1.4 | GO:0034508 | centromere complex assembly(GO:0034508) |
0.0 | 1.4 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
0.0 | 1.4 | GO:0006635 | fatty acid beta-oxidation(GO:0006635) |
0.0 | 1.3 | GO:0000470 | maturation of LSU-rRNA(GO:0000470) |
0.0 | 1.3 | GO:0060337 | type I interferon signaling pathway(GO:0060337) cellular response to type I interferon(GO:0071357) |
0.4 | 1.2 | GO:0051562 | negative regulation of mitochondrial calcium ion concentration(GO:0051562) |
0.3 | 1.2 | GO:1902530 | regulation of protein linear polyubiquitination(GO:1902528) positive regulation of protein linear polyubiquitination(GO:1902530) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.7 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 2.2 | GO:0043657 | host(GO:0018995) host cell(GO:0043657) |
0.1 | 1.5 | GO:0072546 | ER membrane protein complex(GO:0072546) |
0.0 | 1.5 | GO:0042645 | nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645) |
0.1 | 1.4 | GO:0044233 | ER-mitochondrion membrane contact site(GO:0044233) |
0.0 | 1.4 | GO:0032588 | trans-Golgi network membrane(GO:0032588) |
0.1 | 1.3 | GO:0017101 | aminoacyl-tRNA synthetase multienzyme complex(GO:0017101) |
0.0 | 1.2 | GO:0043189 | NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562) |
0.0 | 1.1 | GO:0043596 | nuclear replication fork(GO:0043596) |
0.0 | 1.1 | GO:0005782 | peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.7 | GO:0001730 | 2'-5'-oligoadenylate synthetase activity(GO:0001730) |
0.0 | 2.5 | GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027) |
0.0 | 2.5 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.0 | 2.0 | GO:0047485 | protein N-terminus binding(GO:0047485) |
0.1 | 1.6 | GO:0016505 | peptidase activator activity involved in apoptotic process(GO:0016505) |
0.1 | 1.4 | GO:0002151 | G-quadruplex RNA binding(GO:0002151) |
0.1 | 1.4 | GO:0008353 | RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353) |
0.2 | 1.3 | GO:0043812 | phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812) |
0.1 | 1.3 | GO:0004652 | polynucleotide adenylyltransferase activity(GO:0004652) |
0.0 | 1.3 | GO:0070717 | poly-purine tract binding(GO:0070717) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.6 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.0 | 1.9 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 1.7 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
0.1 | 1.2 | ST INTERFERON GAMMA PATHWAY | Interferon gamma pathway. |
0.1 | 1.2 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
0.0 | 1.0 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.0 | 0.8 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 0.7 | PID NFKAPPAB CANONICAL PATHWAY | Canonical NF-kappaB pathway |
0.1 | 0.6 | ST TYPE I INTERFERON PATHWAY | Type I Interferon (alpha/beta IFN) Pathway |
0.0 | 0.6 | PID RANBP2 PATHWAY | Sumoylation by RanBP2 regulates transcriptional repression |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.6 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 1.8 | REACTOME FORMATION OF FIBRIN CLOT CLOTTING CASCADE | Genes involved in Formation of Fibrin Clot (Clotting Cascade) |
0.1 | 1.7 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.1 | 1.7 | REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE | Genes involved in Synthesis of PIPs at the Golgi membrane |
0.0 | 1.6 | REACTOME CYTOSOLIC TRNA AMINOACYLATION | Genes involved in Cytosolic tRNA aminoacylation |
0.0 | 1.5 | REACTOME PHOSPHORYLATION OF THE APC C | Genes involved in Phosphorylation of the APC/C |
0.0 | 1.5 | REACTOME METAL ION SLC TRANSPORTERS | Genes involved in Metal ion SLC transporters |
0.0 | 1.4 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.0 | 1.4 | REACTOME ER PHAGOSOME PATHWAY | Genes involved in ER-Phagosome pathway |
0.1 | 1.3 | REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS | Genes involved in Homologous recombination repair of replication-independent double-strand breaks |